Abstracts and slides sorted by topic


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Topics


Abstracts sorted by topic

bioinformatics workflows


[A][S]Leslie AICHAOUI-DENEVE, Vincent FROMION, Matthieu JULES, Ludovic LE CHATBaSyLiCA:A web interface for automatic process of Live Cell Array data using R
[A][S]Michal Figurski, Leslie ShawEstimation of the Area-Under-the-Curve of Mycophenolic Acid using population pharmacokinetic and multi-linear regression models simultaneously
[A][S]Setia Pramana, Dan Lin, Philippe Haldermans, Ziv ShkedyIsoGeneGUI: a graphical user interface for analyzing dose-response studies in microarray experiments

biostatistics 1


[A][S]Christopher Bilder, Boan Zhang, Frank Schaarschmidt, Joshua TebbsbinGroup: A Package for Group Testing
[A][S]Bill Pikounis, John OleynickThe cg package for comparison of groups
[A][S]Michael FayTwo-sided Exact Tests and Matching Confidence Intervals for Discrete Data

biostatistics 2


[A][S]Michael Halter, Daniel R. Sisan, K.M. Mullen, Z.Q. John LuStatistical Analysis of Cell Population Data
[A]Nelson AfanadorUsing R for Data Mining in Vaccine Manufacturing: Finding Needles in Biological Haystacks
[A]Yingyun LiuUsing R for Data Simulation and Regression of Isothermal Titration Calorimetry of Proteins with Alternative Conformations

biostatistics 3


[A]Guido Knapp, Bimal Sinha, Dihua XuExtracting within-experiment precision of horticultural experiments useful for meta-analysis
[A]Joseph Kahn, Peter Danenberg, Sourav Das, Derek AyersModel simulation and decision analysis with the SimR package in R
[A][S]Frank Mannino, Richard Heiberger, Valerii FedorovStochastic modeling and simulation in the design of multicenter clinical trials
[A][S]Yue Shentuvisualization of titrated dose and recurring events using R/ggplot2

biostatistics workflows


[A][S]Jeff Skinner, VIvek Gopalan, Jason Barnett, Yentram HuyenAutomating biostatistics workflows for bench scientists using R-based web-tools
[A][S]Sourish Saha, Vladimir Anisimov, Valerii Fedorov, Richard HeibergerDrug Supply Modeling Software
[A]Yauheniya Cherkas, Javier Cabrera, Birol Emir, Ha NguyenPfarMineR: An User-Friendly Expandable Front-End For Biopharmaceutical Applications with R

business intelligence


[A][S]Liang Wei, Brendan KittsAnalyzing Direct Marketing Data with R
[A]Andrew LampittPlacing the Power of R into Your Hands
[A]David Reinke, Steve MillerR and BI -- Integrating R with Open Source Business Intelligence Platforms Pentaho and Jaspersoft
[A][S]Ettore Colombo, Gloria Ronzoni, Matteo FontanaR role in Business Intelligence Software Architecture

cloud computing


[A]Hsin-Ying Hsieh, Kun-Hsien Lin, Sun-Chong WangCloud-R: toward a community-backed R in the cloud
[A]Karim ChineElastic-R, a Google docs-like portal for data analysis in the Cloud
[A][S]Jeroen OomsWeb development with R

commercial applications 1


[A][S]Brian Hess, Michele ChambersIn-database analytics with R
[A]Mieczyslaw Klopotek, Przemyslaw Biecek, Justin LindseySimple Bayesian Networks on Netezza Box
[A][S]Bill LaddStructured Text Access and Analysis
[A]Michael OConnell, Subra SubramanianThe use of R, S+ and Spotfire in the Oracle Life Sciences Data Hub Environment

commercial applications 2


[A][S]Doug SchmidtAdaptive Middleware and High Performance Software For Multi-core Deployments Across Cloud Configurations
[A][S]Derek NortonDavid v. Goliath: How to build an R presence in a corporate SAS environment
[A]Richard Pugh, John JamesNavigator: creating and managing complex graphics in a production environment

computer experiments and simulation


[A][S]Andreas Alfons, Matthias Templ, Peter FilzmoserThe R package simFrame: An object-oriented approach towards simulation studies in statistics
[A][S]Neil DiamondUsing R for the Visualisation of Computer Experiments

data manipulation and classification


[A][S]Drew ConwayReal-time network analysis in R using Twitter
[A]Pascal Neveu, Juliette FabreUsing ontologies for R functions management
[A]Christopher BrownVenn : Powerful and High-Level and Set Manipulating ... a whole new way of working with data

data mining, machine learning


[A]Collin Bennett, Dave Locke, Robert Grossman, Steve VejcikBuilding Segmented Models Using R and Hadoop
[A]Shengqiao Li, Donald Adjeroh, E. James HarnerRandom KNN Classification and Regression
[A][S]Margaret Mio-Julia, Arnau Mir, Monica J. Ruiz-MiroR-TREE: Implementation of Decision Trees using R

finance and resource allocation


[A][S]Gloria Ronzoni, Ettore Colombo, Matteo FontanaR for Labour Market Policies
[A][S]Dirk Eddelbuettel, Khanh NguyenRQuantLib: Bridging QuantLib and R
[A]Jeffrey RyanTrading in Real Time with R and IBrokers

fMRI


[A]Daniela UshizimaFront propagation using fast marching in R
[A]Bjorn Roelstraete, Yves RosseelspmR: An R package For fMRI Data Analysis Based On The SPM Algorithms.
[A][S]Gang Chen, Ziad Saad, Robert CoxStatistical Analysis Programs in R for FMRI Data

gene expressions, genetics


[A]John Kloke, Joseph McKean, Patrick Kimes, Hilary ParkerAdaptive Nonparametric Statistics with Applications to Gene Expression Data
[A][S]Tal Galili, Shaul Shaul, Yoav BenjaminiAnalyzing the Operational RNA Code for Amino Acids - Using R

grid computing


[A][S]Yann Richet, David Ginsbourger, Olivier Roustant, Yves DevilleA Grid Computing Environment for Design and Analysis of Computer Experiments
[A]Karim ChineUser friendly distributed computing with R

GUIs 1


[A][S]Ralf Bierig, Jacek Gwizdka, Michael Cole, Nicholas BelkinAn Experiment Data Analysis Framework: Evaluating Interactive Information Behaviour with R
[A][S]Dedi RosadiTeaching Time Series analysis course using RcmdrPlugin.Econometrics
[A][S]John VerzaniThe traitr package

GUIs 2


[A][S]Ian FellowsDeducer: A Graphical useR interface for everyone
[A][S]Sheri GilleyDesigning a Flexible GUI for R
[A]Tom Taverner, Ashoka Polpitiya, Gordon A Anderson, Richard D SmithRGtk2Extras and DanteR: rapid GUI development for an "omics" R package

high-performance-computing


[A]Neil Shah, Guruprasad Kora, Paul Breimyer, Yekaterina ShpanskayapR: Enabling Automatic Parallelization of Data-Parallel Tasks and Interfacing Parallel Computing Libraries in R with Application to Fusion Reaction Simulations
[A]Mario Inchiosa, Cezary Dendek, Przemysaw BiecekScalable linear algebra with the nzmatrix package
[A][S]Muriel Mewissen, Thorsten Forster, Terry Sloan, Savvas PetrouSPRINT: a Simple Parallel INTerface to High Performance Computing and a Parallel R Function Library.

interfaces


[A]Ansgar StelandA high-performance compiler for a subset of R
[A][S]Andrew RunnallsCXXR and Add-on Packages
[A][S]Andrew ReddNppToR: R Interaction for Notepad++
[A][S]Karl-Dieter CrismanSage and R: Using R via the Sage notebook

kaleidoscope 1


[A][S]Heather Turner, David FirthBradleyTerry2: Flexible Models for Paired Comparisons
[A]Z.Q. John Lu, F. Potra, A. J. WangFitting Multiphase Regression Models in R with Applications in Microarray Experiments
[A][S]John FoxThe RcmdrPlugin.survival Package: A Survival-Analysis GUI for R
[A][S]Jing Hua ZhaoUse of R in Genetic Epidemiology Designs
[A]Christian GunningUsing Rwave to detect synchrony of influenza between U.S. states

kaleidoscope 2


[A]Jeffrey RyanColumn Databases Made Easy with R
[A][S]Yihui XieCreating Animations with R
[A][S]Dirk Eddelbuettel, Romain FrancoisRcpp: Seamless R and C++ integration
[A][S]Landon JensensteReoscopy

kaleidoscope 3


[A][S]Daniel V. SamarovGeneralized Significance in Scale Space: The GS3 Package
[A][S]Paul Rustomji, Brent Henderson, Katie Mills, Bai QifengR as a statistical engine for a water quality trend analysis web -service
[A]Matthias Templ, Karel Hron, Peter FilzmoserrobCompositions: An R-package for robust statistical analysis of compositional data
[A][S]Martin Maechler, Douglas BatesSparse Model Matrices for (Generalized) Linear Models
[A][S]Jonathan LeesThe Haiti Earthquake: Seismological Analysis Using R

kaleidoscope 4


[A][S]Stefan Theussl, Kurt Hornik, David MeyerMany Solvers, One Interface - ROI, the R Optimization Infrastructure Package
[A][S]Dai Feng, Luke Tierneymritc - A package for MRI tissue classification
[A][S]Soeren Sonnenburg, Gunnar Raetsch, Sebastian Henschel, Christian WidmerSHOGUN - A Large Scale Machine Learning Toolbox
[A][S]Joerg Polzehl, Karsten TabelowStatistical Issues in Accessing Brain Functionality and Anatomy
[A][S]Max KuhnThe caret Package: A Unified Interface for Predictive Models

kaleidoscope 5


[A][S]Erich NeuwirthInvestigating ODEs with R and spreadsheets
[A][S]Hrishikesh VinodTime Series Inference Applications of R in Finance and Econometrics
[A][S]Jeremy RawTravelR: Travel Demand Modeling in R
[A]Ganesh Subramaniam, Ravi Varadhan, Simon Urbanek, Sam EpsteintsX: An R package for the exploratory analysis of a large collection of time-series
[A][S]Zack AlmquistUS Census Spatial and Demographic Data in R: the UScensus2000-suite of packages

kaleidoscope-commercial


[A][S]Brian Hess, Michele ChambersAnalytics at Scale with R
[A][S]David SmithEvolving R for Use in Commercial Environments
[A][S]Lou Bajuk-Yorgan, Stephen KaluznyMaking R accessible to Business Analysts with TIBCO Spotfire
[A]Jim PorzakMarketing Analytics in R
[A][S]Alex Guazzelli, Konstantinos Stathatos, Michael ZellerPMML Execution of R Built Predictive Solutions

lists and objects


[A]Christopher BrownEat your hashes! Hash come to R
[A][S]Romain Francois, Dirk EddelbuettelRProtoBuf: Protocol Buffers for R
[A]John JamesUse of and Using R as on Object Oriented Language

longitudinal data analysis


[A][S]Yue Wang, Narinder NangiaBayesian Monitoring of A Longitudinal Clinical Trial Using R2WinBUGS
[A][S]M. Helena Goncalves, M. Salome Cabral, Adelchi Azzalinibild: a package for BInary Longitudinal Data
[A][S]Pete Philipson, Ruwanthi Kolamunnage-Dona, Ines SousaSoftware for the joint modelling of longitudinal and survival data: the JoineR package

metRology


[A]James Yen, Stephen EllisonAnalysis of interlaboratory studies using R and the metRology package
[A]W. F. Guthrie, H. LiuAn Excel Interface for Functions in the meRology Package
[A]Rudiger KesselAutomatic R-script generation for Monte Carlo Simulations
[A]Hung-kung Liu, Steve Ellison, William Guthrie, Antonio PossolometRology - a new R package for statistical metrology

misc


[A]Guria SibnarayanDiagnostics in Count Data Model
[A]Mark van der LooDistribution based outlier detection with the extremevalues package
[A][S]Giles Crane, Cynthia Collins, Karin MilleEvaluating Grant Applications with Generalized Chain Block Designs in R
[A][S]Alex ZolotGeneralized Linear Mixed Model with Spatial Covariates

misc workflows


[A]Xuefei Mi, H. Friedrich Utz, Albrecht E. MelchingerIntegrated Development of the Software with Literate Programming: An Example in Plant Breeding
[A][S]Anup Parikh, Kyle CovingtonRed-R: A visual programming and data analysis framework

optimization


[A][S]Steven EllisAn Algorithm for Unconstrained Quadratically Penalized Convex Optimization
[A][S]Ravi VaradhanSQUAREM: An R package for Accelerating Slowly Convergent Fixed-Point Iterations Including the EM and MM algorithms
[A]Jo Reynaerts, Ravi Varadhan, John C. NashThe Convergence Properties of the BLP (1995) Contraction Mapping and Alternative Algorithms in R

parallel computing


[A][S]Przemyslaw Biecek, Pawel Chudzian, Cezary Dendek, Justin LindseyMassively parallel analytics for large datasets in R with nza package
[A][S]Junji Nakano, Ei-ji NakamaParallel Computing with R using GridRPC
[A][S]Norman MatloffRdsm: Distributed (Quasi-)Threads Programming in R

pedagogy 1


[A][S]Richard M. HeibergerAn Intermediate Course in Statistical Computing
[A][S]G. Jay KernsThe IPSUR package: an Introduction to Probability and Statistics Using R
[A][S]Brian A. Danielak, Andrew Elby, Eric Kuo, Michael M. HullUsing R to Assess Mathematical Sense-Making in Introductory Physics Courses

pedagogy 2


[A]Daniel KaplanComputers and the Teaching of Statistics
[A][S]Thomas Roth, Joachim HerrmannTeaching Statistics in Quality Science using the R-Package qualityTools
[A]Ken AhoTeaching statistics to biologists: the R-library asbio

pedagogy 3


[A]Fausto Molinari, Martina SalvadoriR-Adamant: Financial technical analysis made easy
[A][S]Arnau Mir, Margaret Miro-Julia, Monica J. Ruiz-MiroUsing R for Active Learning and Self-assesment in an e-Learning Environment

poster


[A][S]Richard BilonickAnalysis of Data from Method Comparison Studies Using R, merror, and OpenMx
[A][S]Paul TeetorAnalytics for Trading Financial Spreads
[A][S]Autumn LaughbaumAnimated Graphics using R
[A]David Wheeler, Kai Yu, Melissa FriesenAre there latent decision rules in expert occupational exposure assessments?
[A][S]Nadeem FaizA Simple Visualization of S and P 500 Index Performance
[A][S]Ashoka Polpitiya, Navdeep Jaitly, Konstantinos PetritisA Tool for Quantitative Analysis of Proteomics Data
[A][S]Bryan HansonChemoSpec: An R Package for the Chemometric Analysis of Spectroscopic Data
[A]Max BuotEstimating a multivariate normal covariance matrix subject to a Loewner ordering
[A]Ana Carolina CN Mafra, Ricardo Cordeiro, Luciana B Nucci, Celso StephanGeneralized additive models to nomial responses using bivariate Kernel: an solution to spatial analysis.Generalized additive models to nomial responses using bivariate Kernel: an solution to spatial analysis.
[A][S]Tom Filloon, Dave DunlopHow to Effectively Visualize and Quantify a 3-D Image?
[A][S]Fayaz Kondagula, Karl MoltInfrared Spectrometric Purity Control of Chemical Substances using R
[A]Panayotis Giannakouros, Lihua ChenIntroducing computational thinking with free software in a math for liberal arts course
[A]Jeff CromwellModel Maker 1: Using Model Based Ontologies for Agent Based Estimation and Learning of R Packages
[A]Ron GuidaParallelizing a Computationally Intensive Financial R Application with Zircon Technology
[A]Tom Taverner, Ashoka Polpitiya, Gordon A Anderson, Richard D SmithRGtk2Extras and DanteR: rapid GUI development for an "omics" R package
[A][S]Inga MaslovaR package wfIMA: Wavelet-Functional Indexes of Magnetic Activity
[A][S]Joan Vila, Montse Rue, Nuria Codern, Albert SorribasTeaching Statistics: An example of "How to'' improve the students' statistical skills using individualized assignments
[A][S]Michael LarsenTeaching Survey Sampling Theory using R
[A]Ivan Kojadinovic, Jun YanTests in Modeling Continuous Multivariate Distributions Using Copulas
[A]Kuntal Bhattacharyya, Pratim Datta, David BoothTo Do or Not To Do Business with a Country: A Robust Classification Approach
[A][S]Vincent Negre, Caroline Domerg, Juliette Fabre, Anne TireauUsing R for data management in ecophysiology Information Systems

real-time computing


[A][S]Erich Neuwirth, Julia Theresa CsarPrototyping Preventive Maintenance Tools with R
[A][S]John Emerson, Michael Kane, Bryan LewisReal-time processing and analysis of data streams
[A]Zubin Dowlaty, Deepak BysaniUsing R in an Event Driven Service Architecture

reproducible research and generating reports


[A][S]Hector Sanz, Isaac Subirana, Joan VilaBivariate Analyses
[A][S]Abhijit DasguptaFlexible report generation and literate programming using R and Python's docutils module
[A][S]Carlin Brickner, Iordan Slavov, Rocco NapoliGraphics Device Tabular Output
[A][S]Christophe Genolini, Bernard Desgraupes, Lionel Riou FrancaR to LaTeX / HTML

R social networks


[A][S]Tal GaliliBlogging about R
[A][S]Eric SunCriss-Crossing the Org Chart: Predicting Colleague Interactions with R
[A][S]George ZhangSocial network analysis with R sna package

RuG panel discussion


[A]Porzak Jim, Conway Drew, Pafka Szilard, Nash JohnPanel on Starting and Building a Local R User Group

social sciences


[A][S]Yves Rosseellavaan: an R package for structural equation modeling and more
[A][S]Patrick Mair, Reinhold HatzingerNew developments for extended Rasch modeling in R
[A][S]Eric Wu, Patrick Mair, Peter BentlerThe REQS package for linking the SEM software EQS to R

spatio-temporal data analysis


[A]Qiushan TaoChinaMap: Maps of China for analysing spatial data
[A]Thomas AchiaGeneralized linear spatial modeling of HIV in Kenya
[A]Benjamin MazzottaTrade Cartograms: a Graphical Method for Dyadic Datasets

spreadsheets and RExcel


[A][S]Keith Halbert, Richard Heiberger, Erich NeuwirthExport pivot table to R using RExcel
[A]Christopher Snyder, Keith HalbertPlotting Advanced Mathematical Functions in Excel Using RExcel
[A][S]Adrian DragulescuRead, write, format Excel 2007 (xlsx) files

time series


[A]Robert Samohyl, Elisa HenningForecast Monitoring via Multivariate Statistical Process Control with R
[A][S]Irina RoslyakovaModified segmentation methods of quasi-stationary time series
[A]Giuseppe BrunoMonte Carlo Simulation for Pricing European and American Basket option
[A][S]Marlene MarchenaThe bullwhip effect under a generalized demand process: an R implementation

visualization


[A][S]Richard M. Heiberger, G. Jay KernsA Plot Method for "htest" Objects
[A][S]Wesley Turner, Jeff Baumes, Phillipe Pebay, Thomas OtahalIntegration of R to VTK, Adding Statistical Computation to a Visualization Toolkit
[A]Marie Vendettuoli, Dianne Cook, Heike HofmannPoints, Curves and Haystacks: Datavis and Metabolomics