- using R version 4.5.1 Patched (2025-09-24 r88901)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.3.0-8) 14.3.0
GNU Fortran (Debian 14.3.0-8) 14.3.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘biomod2/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘biomod2’ version ‘4.2-6-2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘biomod2’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [11s/12s] OK
- checking whether the package can be loaded with stated dependencies ... [11s/13s] OK
- checking whether the package can be unloaded cleanly ... [11s/13s] OK
- checking whether the namespace can be loaded with stated dependencies ... [11s/15s] OK
- checking whether the namespace can be unloaded cleanly ... [11s/13s] OK
- checking loading without being on the library search path ... [11s/15s] OK
- checking whether startup messages can be suppressed ... [11s/13s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [69s/90s] OK
- checking Rd files ... [1s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [10s/12s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [93s/115s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
BIOMOD_RangeSize 8.985 0.089 12.438
bm_PlotRangeSize 8.178 0.150 9.980
bm_Tuning 7.162 0.129 8.530
BIOMOD.projection.out 4.906 0.090 5.678
BIOMOD_EnsembleModeling 4.901 0.051 6.527
BIOMOD_Modeling 4.868 0.008 7.993
BIOMOD.formated.data.PA 4.685 0.114 5.567
BIOMOD.ensemble.models.out 4.477 0.100 5.627
bm_PlotResponseCurves 4.455 0.070 5.325
bm_PlotVarImpBoxplot 4.105 0.052 5.202
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [6s/8s] OK
- checking PDF version of manual ... [16s/21s] OK
- checking HTML version of manual ... [8s/12s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK