• using R version 4.5.1 Patched (2025-06-30 r88369)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-19) 14.2.0     GNU Fortran (Debian 14.2.0-19) 14.2.0
• running under: Debian GNU/Linux 13 (trixie)
• using session charset: UTF-8
• checking for file ‘PhotoGEA/DESCRIPTION’ ... OK
• this is package ‘PhotoGEA’ version ‘1.3.3’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘PhotoGEA’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [25s/31s] OK
• checking Rd files ... [3s/4s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [136s/201s] OK Examples with CPU (user + system) or elapsed time > 5s                                  user system elapsed confidence_intervals_c3_aci 7.649 0.025 8.636 confidence_intervals_c4_aci 6.932 0.017 9.554 fit_c3_variable_j 6.510 0.008 9.716 fit_c3_aci 6.145 0.009 11.557 initial_guess_c3_variable_j 5.568 0.020 8.006 fit_c4_aci 4.970 0.012 7.886 calculate_c3_limitations_grassi 4.605 0.032 6.661 plot_c3_aci_fit 4.207 0.019 6.501 calculate_jmax 4.219 0.006 6.420 calculate_c3_limitations_warren 4.150 0.005 6.827 plot_c4_aci_fit 4.059 0.016 5.889 initial_guess_c3_aci 3.965 0.011 5.994 initial_guess_c4_aci 3.675 0.012 5.087 fit_c4_aci_hyperbola 3.607 0.015 5.191 calculate_gm_busch 2.814 0.065 5.575
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [182s/271s] OK   Running ‘testthat.R’ [182s/270s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [48s/74s] OK
• checking PDF version of manual ... [16s/24s] OK
• checking HTML version of manual ... [11s/14s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: OK