- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'matrixCorr/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'matrixCorr' version '0.8.3'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'matrixCorr' can be installed ... OK
See the install log for details.
- used C++ compiler: 'g++.exe (GCC) 13.3.0'
- checking C++ specification ... OK
Not all R platforms support C++17
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [4s] OK
- checking whether the package can be loaded with stated dependencies ... [4s] OK
- checking whether the package can be unloaded cleanly ... [4s] OK
- checking whether the namespace can be loaded with stated dependencies ... [4s] OK
- checking whether the namespace can be unloaded cleanly ... [4s] OK
- checking loading without being on the library search path ... [4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [20s] OK
- checking Rd files ... [2s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compiled code ... OK
- checking examples ... [23s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [20s] ERROR
Running 'testthat.R' [19s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(matrixCorr)
>
> test_check("matrixCorr")
Saving _problems/test_biweight_mid_corr-158.R
[ FAIL 1 | WARN 0 | SKIP 5 | PASS 416 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test_bland_altman_repeated.R:103:3',
'tests_schafer_corr.R:120:3', 'tests_schafer_corr.R:138:3',
'tests_schafer_corr.R:172:3', 'tests_schafer_corr.R:257:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_biweight_mid_corr.R:158:3'): threading does not change results beyond tiny numerical noise ──
Expected `R1` to equal `R2`.
Differences:
actual vs expected
[, 1] [, 2] [, 3] [, 4] [, 5] [, 6] [, 7] [, 8] [, 9] [,10] [,11] [,12] [,13] [,14] [,15] [,16] [,17] [,18] [,19] [,20]
- actual[1, ] 1.0000000000 -0.0140785587 0.023951990 -0.0014034733 -0.0355030685 -0.032243443 0.051647311 -0.043267140 -0.045275646 -0.0004818199 -0.030835074 0.0383685180 0.0020483151 -0.013047296 -0.111334714 0.0224342613 -0.0118449491 -0.065026941 -0.073869806 -0.027178325
+ expected[1, ] 1.0000000000 -0.0140785587 0.023951990 -0.0014034733 -0.0355030685 NaN 0.051647311 -0.043267140 -0.045275646 -0.0004818199 -0.030835074 0.0383685180 0.0020483151 -0.013047296 -0.111334714 0.0224342613 -0.0118449491 -0.065026941 -0.073869806 -0.027178325
- actual[2, ] -0.0140785587 1.0000000000 0.007737748 -0.0213330403 -0.0055258314 0.003063168 0.028408103 -0.031507603 0.088620776 0.0823708910 -0.015443737 0.0009664715 0.0371425767 0.042295843 -0.057061642 -0.0724853729 0.0441249231 0.011785231 -0.089117299 -0.065559255
+ expected[2, ] -0.0140785587 1.0000000000 0.007737748 -0.0213330403 -0.0055258314 NaN 0.028408103 -0.031507603 0.088620776 0.0823708910 -0.015443737 0.0009664715 0.0371425767 0.042295843 -0.057061642 -0.0724853729 0.0441249231 0.011785231 -0.089117299 -0.065559255
- actual[3, ] 0.0239519897 0.0077377475 1.000000000 -0.0369926906 -0.1002197498 0.047787903 0.001164342 -0.034535938 0.026225644 -0.0504061821 0.111839064 0.0019500980 -0.0273638323 -0.009884259 0.014970878 0.0221797757 0.0770754219 0.055930685 0.027205195 0.037412159
+ expected[3, ] 0.0239519897 0.0077377475 1.000000000 -0.0369926906 -0.1002197498 NaN 0.001164342 -0.034535938 0.026225644 -0.0504061821 0.111839064 0.0019500980 -0.0273638323 -0.009884259 0.014970878 0.0221797757 0.0770754219 0.055930685 0.027205195 0.037412159
- actual[4, ] -0.0014034733 -0.0213330403 -0.036992691 1.0000000000 0.0006591784 0.052627378 -0.015724524 0.115669515 0.009403222 -0.0079591842 -0.064539243 -0.0823447179 0.0117770634 -0.008133163 0.022219905 0.0009760598 -0.0081766039 -0.037042569 0.010209042 0.019041397
+ expected[4, ] -0.0014034733 -0.0213330403 -0.036992691 1.0000000000 0.0006591784 NaN -0.015724524 0.115669515 0.009403222 -0.0079591842 -0.064539243 -0.0823447179 0.0117770634 -0.008133163 0.022219905 0.0009760598 -0.0081766039 -0.037042569 0.010209042 0.019041397
- actual[5, ] -0.0355030685 -0.0055258314 -0.100219750 0.0006591784 1.0000000000 0.015693712 -0.028168495 0.049872767 0.007638964 -0.0240313615 0.023043784 -0.0117861829 -0.0111140291 -0.043132474 0.007862862 -0.0142392465 0.0266946793 0.042874028 0.071367111 -0.021259898
+ expected[5, ] -0.0355030685 -0.0055258314 -0.100219750 0.0006591784 1.0000000000 NaN -0.028168495 0.049872767 0.007638964 -0.0240313615 0.023043784 -0.0117861829 -0.0111140291 -0.043132474 0.007862862 -0.0142392465 0.0266946793 0.042874028 0.071367111 -0.021259898
- actual[6, ] -0.0322434435 0.0030631683 0.047787903 0.0526273776 0.0156937123 1.000000000 -0.066528521 -0.007064756 -0.069850659 -0.0673002915 -0.046601460 0.0577264651 0.0161138708 0.073012228 -0.081875152 -0.0238301773 -0.0272201954 0.088916413 0.022910920 0.071407820
+ expected[6, ] NaN NaN NaN NaN NaN 1.000000000 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN
- actual[7, ] 0.0516473107 0.0284081026 0.001164342 -0.0157245243 -0.0281684949 -0.066528521 1.000000000 -0.005528187 0.046870914 -0.0670663653 -0.063798670 0.0246781219 0.0431141090 -0.041576671 0.049804221 -0.0065179588 -0.0718418709 0.010326353 -0.019190670 -0.032692702
+ expected[7, ] 0.0516473107 0.0284081026 0.001164342 -0.0157245243 -0.0281684949 NaN 1.000000000 -0.005528187 0.046870914 -0.0670663653 -0.063798670 0.0246781219 0.0431141090 -0.041576671 0.049804221 -0.0065179588 -0.0718418709 0.010326353 -0.019190670 -0.032692702
- actual[8, ] -0.0432671396 -0.0315076034 -0.034535938 0.1156695146 0.0498727670 -0.007064756 -0.005528187 1.000000000 0.024223522 0.0078790023 0.029729827 0.0095176961 0.0582667378 -0.011616783 0.064377463 -0.0209425296 -0.0322612212 0.063143092 -0.024142024 0.009270637
+ expected[8, ] -0.0432671396 -0.0315076034 -0.034535938 0.1156695146 0.0498727670 NaN -0.005528187 1.000000000 0.024223522 0.0078790023 0.029729827 0.0095176961 0.0582667378 -0.011616783 0.064377463 -0.0209425296 -0.0322612212 0.063143092 -0.024142024 0.009270637
- actual[9, ] -0.0452756464 0.0886207764 0.026225644 0.0094032219 0.0076389636 -0.069850659 0.046870914 0.024223522 1.000000000 0.0230088476 0.150798758 0.0147446621 -0.0517356868 0.038572908 0.037323031 0.0686049499 0.1179444524 0.046739269 0.054566044 0.018179459
+ expected[9, ] -0.0452756464 0.0886207764 0.026225644 0.0094032219 0.0076389636 NaN 0.046870914 0.024223522 1.000000000 0.0230088476 0.150798758 0.0147446621 -0.0517356868 0.038572908 0.037323031 0.0686049499 0.1179444524 0.046739269 0.054566044 0.018179459
- actual[10, ] -0.0004818199 0.0823708910 -0.050406182 -0.0079591842 -0.0240313615 -0.067300292 -0.067066365 0.007879002 0.023008848 1.0000000000 -0.026803296 -0.0530535353 -0.0505096147 0.021450492 0.051012759 0.0300665451 0.0796128869 0.002154069 -0.024504844 0.031736932
+ expected[10, ] -0.0004818199 0.0823708910 -0.050406182 -0.0079591842 -0.0240313615 NaN -0.067066365 0.007879002 0.023008848 1.0000000000 -0.026803296 -0.0530535353 -0.0505096147 0.021450492 0.051012759 0.0300665451 0.0796128869 0.002154069 -0.024504844 0.031736932
and 10 more ...
[ FAIL 1 | WARN 0 | SKIP 5 | PASS 416 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [21s] OK
- checking HTML version of manual ... [12s] OK
- DONE
Status: 1 ERROR