* installing *source* package 'matrixCorr' ...
** this is package 'matrixCorr' version '0.12.2'
** package 'matrixCorr' successfully unpacked and MD5 sums checked
** using staged installation
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WARNING: this package has a configure script
It probably needs manual configuration
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** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
using C++17
make[1]: Entering directory '/d/temp/2026_06_01_01_50_00_17078/Rtmpq0eGI2/R.INSTALL58d85cab44d1/matrixCorr/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c biweight_mid_corr.cpp -o biweight_mid_corr.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman.cpp -o bland_altman.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bland_altman_repeated.cpp -o bland_altman_repeated.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_glmm_poisson.cpp -o ccc_glmm_poisson.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated.cpp -o ccc_repeated.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_helper.cpp -o ccc_repeated_helper.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ccc_repeated_mixed_model.cpp -o ccc_repeated_mixed_model.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c chatterjee_xi.cpp -o chatterjee_xi.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cia.cpp -o cia.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cia_repeated.cpp -o cia_repeated.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cohen_kappa.cpp -o cohen_kappa.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c concordance_corr.cpp -o concordance_corr.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distance_correlation.cpp -o distance_correlation.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gwet_ac.cpp -o gwet_ac.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c hsic.cpp -o hsic.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c icc.cpp -o icc.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kendall_corr.cpp -o kendall_corr.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c krippendorff_alpha.cpp -o krippendorff_alpha.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c multirater_kappa.cpp -o multirater_kappa.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c partial_correlation.cpp -o partial_correlation.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pearson.cpp -o pearson.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c prob_agree.cpp -o prob_agree.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rmcorr.cpp -o rmcorr.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c robust_correlations.cpp -o robust_correlations.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c schafer_strimmer_shrinkage_correlation.cpp -o schafer_strimmer_shrinkage_correlation.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c spearman.cpp -o spearman.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c tetrachoric.cpp -o tetrachoric.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c validate_corr_input.cpp -o validate_corr_input.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -DARMA_USE_CURRENT -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c weighted_kappa.cpp -o weighted_kappa.o
g++ -shared -s -static-libgcc -o matrixCorr.dll tmp.def RcppExports.o biweight_mid_corr.o bland_altman.o bland_altman_repeated.o ccc_glmm_poisson.o ccc_repeated.o ccc_repeated_helper.o ccc_repeated_mixed_model.o chatterjee_xi.o cia.o cia_repeated.o cohen_kappa.o concordance_corr.o distance_correlation.o gwet_ac.o hsic.o icc.o kendall_corr.o krippendorff_alpha.o multirater_kappa.o partial_correlation.o pearson.o prob_agree.o rmcorr.o robust_correlations.o schafer_strimmer_shrinkage_correlation.o spearman.o tetrachoric.o validate_corr_input.o weighted_kappa.o -LD:/RCompile/recent/R-4.5.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.5.3/bin/x64 -lRblas -lgfortran -lquadmath -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_06_01_01_50_00_17078/Rtmpq0eGI2/R.INSTALL58d85cab44d1/matrixCorr/src'
make[1]: Entering directory '/d/temp/2026_06_01_01_50_00_17078/Rtmpq0eGI2/R.INSTALL58d85cab44d1/matrixCorr/src'
make[1]: Leaving directory '/d/temp/2026_06_01_01_50_00_17078/Rtmpq0eGI2/R.INSTALL58d85cab44d1/matrixCorr/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-matrixCorr/00new/matrixCorr/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'matrixCorr' as matrixCorr_0.12.2.zip
* DONE (matrixCorr)