• using R Under development (unstable) (2023-12-08 r85664)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 17.0.5     flang-new version 17.0.5
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘sf/DESCRIPTION’ ... OK
• this is package ‘sf’ version ‘1.0-14’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sf’ can be installed ... [361s/219s] WARNING Found the following significant warnings:   RcppExports.cpp:1333:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security]   RcppExports.cpp:1368:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] See the install log for details.
• used C++ compiler: ‘clang version 17.0.5’
• checking installed package size ... NOTE   installed size is 7.6Mb   sub-directories of 1Mb or more:     doc 1.7Mb     libs 1.1Mb     sqlite 1.5Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [58s/77s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [36s/50s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [211s/265s] OK   Running ‘aggregate.R’   Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4 < Linking to GEOS 3.10.2, GDAL 3.4.3, PROJ 8.2.1; sf_use_s2() is TRUE --- > Linking to GEOS 3.11.1, GDAL 3.6.2, PROJ 9.1.1; sf_use_s2() is TRUE   Running ‘cast.R’   Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK   Running ‘crs.R’   Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK   Running ‘dist.R’   Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK   Running ‘dplyr.R’   Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK   Running ‘empty.R’   Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK   Running ‘gdal_geom.R’   Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...277c277 < Bounding box: xmin: -39.65182 ymin: 10.91731 xmax: 21.97439 ymax: 61.16965 --- > Bounding box: xmin: -39.65182 ymin: 10.93649 xmax: 21.97439 ymax: 61.16965   Running ‘geos.R’ [48s/55s]   Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK   Running ‘graticule.R’   Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK   Running ‘grid.R’   Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK   Running ‘maps.R’   Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK   Running ‘plot.R’ [14s/16s]   Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK   Running ‘read.R’   Comparing ‘read.Rout’ to ‘read.Rout.save’ ...52c52 < 2 lines Line String NA 9 WGS 84 --- > 2 lines Line String NA 10 WGS 84 60c60 < 2 lines Line String 0 9 WGS 84 --- > 2 lines Line String 0 10 WGS 84 321a322,326 > Warning messages: > 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones > 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones 335,336c340 < `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/tests/tst__.gpkg' < using driver `GPKG' --- > `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'   Running ‘roundtrip.R’   Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...70a71,73 > Warning message: > In CPL_crs_from_input(x) : > GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.   Running ‘s2.R’   Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK   Running ‘sample.R’   Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK   Running ‘sfc.R’ [25s/28s]   Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335 < "3.10.2" "3.4.3" "8.2.1" --- > "3.11.1" "3.6.2" "9.1.1"   Running ‘sfg.R’   Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK   Running ‘spatstat.R’ [8s/12s]   Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...113,114c113,114 < spatstat.geom 3.2-7 < spatstat.random 3.2-2 --- > spatstat.geom 3.2-1 > spatstat.random 3.1-5   Running ‘stars.R’ [8s/12s]   Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...142,143c142,143 < x 1 461 -84.32 0.01925 NAD27 FALSE [x] < y 1 141 36.59 -0.01925 NAD27 FALSE [y] --- > x 1 461 -84.3239 0.0192484 NAD27 FALSE [x] > y 1 141 36.5896 -0.0192484 NAD27 FALSE [y]   Running ‘testthat.R’ [35s/43s]   Running ‘units.R’   Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK   Running ‘wkb.R’   Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [75s/90s] OK
• checking PDF version of manual ... [17s/23s] OK
• checking HTML version of manual ... [8s/13s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 WARNING, 1 NOTE