• using R Under development (unstable) (2026-08-01 r90334)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-02 15:58:53 UTC
• checking for file ‘matrixStats/DESCRIPTION’ ... OK
• this is package ‘matrixStats’ version ‘1.5.0’
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘matrixStats’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [9s/12s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [104s/142s] OK   Running ‘allocArray.R’ [0s/1s]   Running ‘allocMatrix.R’ [0s/0s]   Running ‘allocVector.R’ [0s/0s]   Running ‘anyMissing.R’ [0s/0s]   Running ‘anyMissing_subset.R’ [0s/1s]   Running ‘benchmark.R’ [11s/18s]   Running ‘binCounts.R’ [0s/0s]   Running ‘binCounts_subset.R’ [0s/1s]   Running ‘binMeans,binCounts.R’ [0s/0s]   Running ‘binMeans,binCounts_subset.R’ [0s/0s]   Running ‘count.R’ [0s/0s]   Running ‘count_subset.R’ [0s/0s]   Running ‘diff2.R’ [0s/1s]   Running ‘diff2_subset.R’ [0s/0s]   Running ‘indexByRow.R’ [0s/1s]   Running ‘logSumExp.R’ [0s/0s]   Running ‘logSumExp_subset.R’ [0s/0s]   Running ‘mean2.R’ [0s/1s]   Running ‘mean2_subset.R’ [0s/0s]   Running ‘product.R’ [0s/0s]   Running ‘product_subset.R’ [0s/0s]   Running ‘psortKM.R’ [0s/0s]   Running ‘rowAllAnys.R’ [1s/2s]   Running ‘rowAllAnys_subset.R’ [5s/7s]   Running ‘rowAvgsPerColSet.R’ [0s/0s]   Running ‘rowAvgsPerColSet_subset.R’ [0s/1s]   Running ‘rowCollapse.R’ [0s/0s]   Running ‘rowCollapse_subset.R’ [0s/1s]   Running ‘rowCounts.R’ [0s/1s]   Running ‘rowCounts_subset.R’ [2s/3s]   Running ‘rowCumMinMaxs.R’ [0s/1s]   Running ‘rowCumMinMaxs_subset.R’ [2s/2s]   Running ‘rowCumprods.R’ [0s/1s]   Running ‘rowCumprods_subset.R’ [1s/2s]   Running ‘rowCumsums.R’ [0s/1s]   Running ‘rowCumsums_subset.R’ [1s/1s]   Running ‘rowDiffs.R’ [1s/1s]   Running ‘rowDiffs_subset.R’ [3s/4s]   Running ‘rowIQRs.R’ [0s/1s]   Running ‘rowIQRs_subset.R’ [2s/2s]   Running ‘rowLogSumExps.R’ [0s/0s]   Running ‘rowLogSumExps_subset.R’ [1s/2s]   Running ‘rowMads.R’ [0s/1s]   Running ‘rowMads_subset.R’ [1s/2s]   Running ‘rowMeans2.R’ [0s/1s]   Running ‘rowMeans2_subset.R’ [0s/1s]   Running ‘rowMedians.R’ [1s/1s]   Running ‘rowMedians_subset.R’ [1s/1s]   Running ‘rowOrderStats.R’ [0s/0s]   Running ‘rowOrderStats_subset.R’ [1s/2s]   Running ‘rowProds.R’ [0s/0s]   Running ‘rowProds_subset.R’ [1s/2s]   Running ‘rowQuantiles.R’ [11s/14s]   Running ‘rowQuantiles_subset.R’ [2s/2s]   Running ‘rowRanges.R’ [1s/2s]   Running ‘rowRanges_subset.R’ [2s/2s]   Running ‘rowRanks.R’ [7s/9s]   Running ‘rowRanks_subset.R’ [1s/2s]   Running ‘rowSds.R’ [0s/1s]   Running ‘rowSds_subset.R’ [1s/1s]   Running ‘rowSums2.R’ [0s/1s]   Running ‘rowSums2_subset.R’ [1s/1s]   Running ‘rowTabulates.R’ [0s/0s]   Running ‘rowTabulates_subset.R’ [2s/2s]   Running ‘rowVarDiffs.R’ [1s/1s]   Running ‘rowVarDiffs_mad,iqr_subset.R’ [5s/6s]   Running ‘rowVarDiffs_var,sd_subset.R’ [4s/5s]   Running ‘rowVars.R’ [0s/1s]   Running ‘rowVars_subset.R’ [1s/2s]   Running ‘rowWeightedMeans.R’ [0s/1s]   Running ‘rowWeightedMeans_subset.R’ [1s/2s]   Running ‘rowWeightedMedians.R’ [0s/1s]   Running ‘rowWeightedMedians_subset.R’ [1s/2s]   Running ‘rowWeightedVars.R’ [0s/0s]   Running ‘rowWeightedVars_subset.R’ [2s/3s]   Running ‘signTabulate.R’ [0s/1s]   Running ‘signTabulate_subset.R’ [0s/0s]   Running ‘sum2.R’ [0s/1s]   Running ‘sum2_subset.R’ [0s/0s]   Running ‘varDiff_etal.R’ [0s/1s]   Running ‘varDiff_etal_subset.R’ [0s/1s]   Running ‘weightedMean.R’ [0s/1s]   Running ‘weightedMean_subset.R’ [0s/0s]   Running ‘weightedMedian.R’ [0s/0s]   Running ‘weightedMedian_subset.R’ [0s/1s]   Running ‘weightedVar.R’ [0s/0s]   Running ‘weightedVar_etal.R’ [1s/1s]   Running ‘weightedVar_etal_subset.R’ [0s/1s]   Running ‘x_OP_y.R’ [1s/1s]   Running ‘x_OP_y_subset.R’ [4s/6s]   Running ‘zzz.package-unload.R’ [0s/0s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [1s/2s] OK
• checking PDF version of manual ... [7s/9s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp1DL3u9’ ‘~/tmp/scratch/Rtmp2I6thU’   ‘~/tmp/scratch/Rtmp3L7aZe’ ‘~/tmp/scratch/Rtmp4YHXSc’   ‘~/tmp/scratch/Rtmp4at86W’ ‘~/tmp/scratch/Rtmp4cmS5x’   ‘~/tmp/scratch/Rtmp5BJA7x’ ‘~/tmp/scratch/Rtmp5Dvlgw’   ‘~/tmp/scratch/Rtmp5ZYTMg’ ‘~/tmp/scratch/Rtmp5dujqm’   ‘~/tmp/scratch/Rtmp6L4SPw’ ‘~/tmp/scratch/Rtmp6Pym7N’   ‘~/tmp/scratch/Rtmp7k0UCC’ ‘~/tmp/scratch/Rtmp8JZ0fP’   ‘~/tmp/scratch/Rtmp8VRbmV’ ‘~/tmp/scratch/Rtmp8xkfyw’   ‘~/tmp/scratch/Rtmp9n7pbP’ ‘~/tmp/scratch/Rtmp9wajDF’   ‘~/tmp/scratch/RtmpAsqFCw’ ‘~/tmp/scratch/RtmpBOHFPD’   ‘~/tmp/scratch/RtmpBlwCP1’ ‘~/tmp/scratch/RtmpBot4qa’   ‘~/tmp/scratch/RtmpBz2Vtx’ ‘~/tmp/scratch/RtmpCTCRIc’   ‘~/tmp/scratch/RtmpCptmS1’ ‘~/tmp/scratch/RtmpCragVA’   ‘~/tmp/scratch/RtmpCuAFWb’ ‘~/tmp/scratch/RtmpDklJhE’   ‘~/tmp/scratch/RtmpDus3Hi’ ‘~/tmp/scratch/RtmpEBL22R’   ‘~/tmp/scratch/RtmpEBufbM’ ‘~/tmp/scratch/RtmpEOxs1I’   ‘~/tmp/scratch/RtmpFAVboq’ ‘~/tmp/scratch/RtmpFFz8nZ’   ‘~/tmp/scratch/RtmpFLPxNx’ ‘~/tmp/scratch/RtmpG20EWx’   ‘~/tmp/scratch/RtmpGABLyo’ ‘~/tmp/scratch/RtmpGQwgp2’   ‘~/tmp/scratch/RtmpGgevbq’ ‘~/tmp/scratch/RtmpGpMC1J’   ‘~/tmp/scratch/RtmpHaWq6w’ ‘~/tmp/scratch/RtmpHd8NQC’   ‘~/tmp/scratch/RtmpIX08i6’ ‘~/tmp/scratch/RtmpIn6iMf’   ‘~/tmp/scratch/RtmpIv5iXA’ ‘~/tmp/scratch/RtmpIxzSV7’   ‘~/tmp/scratch/RtmpJ60tuo’ ‘~/tmp/scratch/RtmpLeercR’   ‘~/tmp/scratch/RtmpLqLL1S’ ‘~/tmp/scratch/RtmpLxCpfw’   ‘~/tmp/scratch/RtmpLzCgbC’ ‘~/tmp/scratch/RtmpMFfsqG’   ‘~/tmp/scratch/RtmpMY8yGr’ ‘~/tmp/scratch/RtmpMZeTIA’   ‘~/tmp/scratch/RtmpMeARf5’ ‘~/tmp/scratch/RtmpMqlqZy’   ‘~/tmp/scratch/RtmpN2rOC1’ ‘~/tmp/scratch/RtmpO7IAP1’   ‘~/tmp/scratch/RtmpOAnaZi’ ‘~/tmp/scratch/RtmpOd6q6R’   ‘~/tmp/scratch/RtmpP4dL59’ ‘~/tmp/scratch/RtmpPLTXkk’   ‘~/tmp/scratch/RtmpPl2LuA’ ‘~/tmp/scratch/RtmpPwsu9s’   ‘~/tmp/scratch/RtmpQKM4eb’ ‘~/tmp/scratch/RtmpQYNsah’   ‘~/tmp/scratch/RtmpQvynjr’ ‘~/tmp/scratch/RtmpQyFwnJ’   ‘~/tmp/scratch/RtmpRMqlVr’ ‘~/tmp/scratch/RtmpS2cgsp’   ‘~/tmp/scratch/RtmpSIEamB’ ‘~/tmp/scratch/RtmpSu5VtB’   ‘~/tmp/scratch/RtmpUPQOsc’ ‘~/tmp/scratch/RtmpV1x67X’   ‘~/tmp/scratch/RtmpVReDf2’ ‘~/tmp/scratch/RtmpVT03V7’   ‘~/tmp/scratch/RtmpWAbSa1’ ‘~/tmp/scratch/RtmpWTkDkz’   ‘~/tmp/scratch/RtmpWeIYtz’ ‘~/tmp/scratch/RtmpXUb84W’   ‘~/tmp/scratch/RtmpYS5l8S’ ‘~/tmp/scratch/RtmpYdIsDU’   ‘~/tmp/scratch/RtmpYgjlGH’ ‘~/tmp/scratch/RtmpYiSWOz’   ‘~/tmp/scratch/RtmpZnk3Dk’ ‘~/tmp/scratch/RtmpaArRkw’   ‘~/tmp/scratch/RtmpaGNzl9’ ‘~/tmp/scratch/RtmpaYvEHn’   ‘~/tmp/scratch/RtmpajEyq3’ ‘~/tmp/scratch/Rtmpao7pbj’   ‘~/tmp/scratch/Rtmpb2H8qa’ ‘~/tmp/scratch/RtmpbRuNEs’   ‘~/tmp/scratch/Rtmpc2MVqK’ ‘~/tmp/scratch/Rtmpc4dFtg’   ‘~/tmp/scratch/RtmpdAITLo’ ‘~/tmp/scratch/Rtmpdn3Y5W’   ‘~/tmp/scratch/RtmpeLzH2g’ ‘~/tmp/scratch/RtmpePDQuS’   ‘~/tmp/scratch/RtmpedhNli’ ‘~/tmp/scratch/Rtmpexcevg’   ‘~/tmp/scratch/RtmpgEtaqV’ ‘~/tmp/scratch/RtmpgiqdDN’   ‘~/tmp/scratch/RtmpgmUyQk’ ‘~/tmp/scratch/Rtmph3xDQC’   ‘~/tmp/scratch/RtmphJNz3r’ ‘~/tmp/scratch/RtmphSL2B7’   ‘~/tmp/scratch/Rtmpi5BOzl’ ‘~/tmp/scratch/RtmpircRrr’   ‘~/tmp/scratch/RtmpisuWFk’ ‘~/tmp/scratch/RtmpjDsEQr’   ‘~/tmp/scratch/RtmpkHIzQa’ ‘~/tmp/scratch/RtmpkPGHnm’   ‘~/tmp/scratch/RtmpkVmxlN’ ‘~/tmp/scratch/RtmpkXY7DK’   ‘~/tmp/scratch/Rtmpkaf13s’ ‘~/tmp/scratch/RtmpkgxaB0’   ‘~/tmp/scratch/Rtmpky08qi’ ‘~/tmp/scratch/RtmplEy1za’   ‘~/tmp/scratch/Rtmpm7kUrt’ ‘~/tmp/scratch/RtmpmPNF4h’   ‘~/tmp/scratch/RtmpmSbaJ4’ ‘~/tmp/scratch/RtmpnIxCw6’   ‘~/tmp/scratch/RtmpnMMeoM’ ‘~/tmp/scratch/RtmpnPNyRD’   ‘~/tmp/scratch/RtmpnVfboV’ ‘~/tmp/scratch/Rtmpnugktx’   ‘~/tmp/scratch/Rtmpnup2AV’ ‘~/tmp/scratch/RtmpoB5UAj’   ‘~/tmp/scratch/RtmpoN6gfF’ ‘~/tmp/scratch/Rtmponum0g’   ‘~/tmp/scratch/Rtmpp68rzV’ ‘~/tmp/scratch/RtmppAQIfe’   ‘~/tmp/scratch/RtmppT3ipX’ ‘~/tmp/scratch/RtmpphZzDJ’   ‘~/tmp/scratch/RtmpqDJBuK’ ‘~/tmp/scratch/RtmpqKKAX4’   ‘~/tmp/scratch/RtmpqoK9Wr’ ‘~/tmp/scratch/RtmpqsWWgu’   ‘~/tmp/scratch/Rtmpqvor8b’ ‘~/tmp/scratch/RtmprYVOua’   ‘~/tmp/scratch/RtmprunMty’ ‘~/tmp/scratch/Rtmps2qGIp’   ‘~/tmp/scratch/RtmpsF4hW0’ ‘~/tmp/scratch/RtmpsFlMCJ’   ‘~/tmp/scratch/RtmptGtGnH’ ‘~/tmp/scratch/RtmptPknvX’   ‘~/tmp/scratch/RtmptXBmKQ’ ‘~/tmp/scratch/RtmptZDmtb’   ‘~/tmp/scratch/RtmpttfkVy’ ‘~/tmp/scratch/Rtmpv1YVRI’   ‘~/tmp/scratch/RtmpvkAudN’ ‘~/tmp/scratch/Rtmpw0pivH’   ‘~/tmp/scratch/Rtmpw7ZEZT’ ‘~/tmp/scratch/Rtmpweer9u’   ‘~/tmp/scratch/RtmpwhQrWq’ ‘~/tmp/scratch/RtmpwrrDct’   ‘~/tmp/scratch/RtmpxRMTjO’ ‘~/tmp/scratch/RtmpxcJXsb’   ‘~/tmp/scratch/RtmpxqbWbe’ ‘~/tmp/scratch/Rtmpxy7la0’   ‘~/tmp/scratch/Rtmpyjmwid’ ‘~/tmp/scratch/RtmpypGnuu’   ‘~/tmp/scratch/Rtmpz9kYvv’ ‘~/tmp/scratch/RtmpzC555m’   ‘~/tmp/scratch/RtmpzesQgn’   ‘~/tmp/scratch/quarto-session9d326168f8879ea1’   ‘~/tmp/scratch/xvfb-run.032BKY’ ‘~/tmp/scratch/xvfb-run.0O6oAp’   ‘~/tmp/scratch/xvfb-run.0jtyO4’ ‘~/tmp/scratch/xvfb-run.1CzHOu’   ‘~/tmp/scratch/xvfb-run.1ZmaK9’ ‘~/tmp/scratch/xvfb-run.33CFSK’   ‘~/tmp/scratch/xvfb-run.3m7Lu7’ ‘~/tmp/scratch/xvfb-run.3p9O5d’   ‘~/tmp/scratch/xvfb-run.43Ojaz’ ‘~/tmp/scratch/xvfb-run.5OnMMT’   ‘~/tmp/scratch/xvfb-run.5cycNR’ ‘~/tmp/scratch/xvfb-run.6Qesq1’   ‘~/tmp/scratch/xvfb-run.6zHjIc’ ‘~/tmp/scratch/xvfb-run.8zcoPp’   ‘~/tmp/scratch/xvfb-run.9ueuyB’ ‘~/tmp/scratch/xvfb-run.9zOjTX’   ‘~/tmp/scratch/xvfb-run.Abra17’ ‘~/tmp/scratch/xvfb-run.Ahi4Qr’   ‘~/tmp/scratch/xvfb-run.AxJpv1’ ‘~/tmp/scratch/xvfb-run.B7VzGn’   ‘~/tmp/scratch/xvfb-run.Gb02Uv’ ‘~/tmp/scratch/xvfb-run.GhWFVk’   ‘~/tmp/scratch/xvfb-run.GqkC7J’ ‘~/tmp/scratch/xvfb-run.GwOMNW’   ‘~/tmp/scratch/xvfb-run.HZ6gz4’ ‘~/tmp/scratch/xvfb-run.Ile0gc’   ‘~/tmp/scratch/xvfb-run.KGaKiI’ ‘~/tmp/scratch/xvfb-run.KP6UUk’   ‘~/tmp/scratch/xvfb-run.LBiTWE’ ‘~/tmp/scratch/xvfb-run.MOKRYv’   ‘~/tmp/scratch/xvfb-run.MXgvF8’ ‘~/tmp/scratch/xvfb-run.MXkUWw’   ‘~/tmp/scratch/xvfb-run.PmmOyc’ ‘~/tmp/scratch/xvfb-run.Q2c9Cr’   ‘~/tmp/scratch/xvfb-run.RkL2X9’ ‘~/tmp/scratch/xvfb-run.TibI8A’   ‘~/tmp/scratch/xvfb-run.U90bYi’ ‘~/tmp/scratch/xvfb-run.UkTflf’   ‘~/tmp/scratch/xvfb-run.YmnTy9’ ‘~/tmp/scratch/xvfb-run.ZgugCW’   ‘~/tmp/scratch/xvfb-run.ZhzmGA’ ‘~/tmp/scratch/xvfb-run.avmP9Z’   ‘~/tmp/scratch/xvfb-run.cUIZhR’ ‘~/tmp/scratch/xvfb-run.csDo2Q’   ‘~/tmp/scratch/xvfb-run.ejeDu6’ ‘~/tmp/scratch/xvfb-run.fxYTUU’   ‘~/tmp/scratch/xvfb-run.gNi1qE’ ‘~/tmp/scratch/xvfb-run.gpHHBj’   ‘~/tmp/scratch/xvfb-run.gqckVT’ ‘~/tmp/scratch/xvfb-run.hpgZLP’   ‘~/tmp/scratch/xvfb-run.isq0bs’ ‘~/tmp/scratch/xvfb-run.kJZqdw’   ‘~/tmp/scratch/xvfb-run.l0FTZo’ ‘~/tmp/scratch/xvfb-run.lkXfae’   ‘~/tmp/scratch/xvfb-run.lvd3a3’ ‘~/tmp/scratch/xvfb-run.mcnqvW’   ‘~/tmp/scratch/xvfb-run.nA21Rl’ ‘~/tmp/scratch/xvfb-run.nswhWC’   ‘~/tmp/scratch/xvfb-run.qVn6VM’ ‘~/tmp/scratch/xvfb-run.qcglCB’   ‘~/tmp/scratch/xvfb-run.qiEcNb’ ‘~/tmp/scratch/xvfb-run.qxckVo’   ‘~/tmp/scratch/xvfb-run.rll4bz’ ‘~/tmp/scratch/xvfb-run.u3MXL3’   ‘~/tmp/scratch/xvfb-run.uUox6H’ ‘~/tmp/scratch/xvfb-run.utOhWs’   ‘~/tmp/scratch/xvfb-run.vETunp’ ‘~/tmp/scratch/xvfb-run.vWimEU’   ‘~/tmp/scratch/xvfb-run.vfa721’ ‘~/tmp/scratch/xvfb-run.xRXiYN’   ‘~/tmp/scratch/xvfb-run.y8AcH4’ ‘~/tmp/scratch/xvfb-run.yAIFcN’   ‘~/tmp/scratch/xvfb-run.zGG68n’ ‘~/tmp/scratch/xvfb-run.zXfb6u’   ‘~/tmp/scratch/xvfb-run.zfasP6’
• DONE

Status: 1 NOTE