* using log directory 'C:/msys64/home/tomas/utf/ucrt64/inst_all/ClassDiscovery.Rcheck' * using R Under development (unstable) (2020-06-23 r78739) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ClassDiscovery/DESCRIPTION' ... OK * this is package 'ClassDiscovery' version '3.3.12' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ClassDiscovery' can be installed ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'exprSet-example.R' Comparing 'exprSet-example.Rout' to 'exprSet-example.Rout.save' ... OK Running 'test00-color.R' Comparing 'test00-color.Rout' to 'test00-color.Rout.save' ... OK Running 'test01-distance.R' Comparing 'test01-distance.Rout' to 'test01-distance.Rout.save' ... OK Running 'test02-cluster.R' Comparing 'test02-cluster.Rout' to 'test02-cluster.Rout.save' ... OK Running 'test02.1-just.R' Comparing 'test02.1-just.Rout' to 'test02.1-just.Rout.save' ... OK Running 'test03-boot.R' Comparing 'test03-boot.Rout' to 'test03-boot.Rout.save' ... OK Running 'test04-perturb.R' Comparing 'test04-perturb.Rout' to 'test04-perturb.Rout.save' ... OK Running 'test04.1-gpca.R' Comparing 'test04.1-gpca.Rout' to 'test04.1-gpca.Rout.save' ... OK Running 'test05-spca.R' Comparing 'test05-spca.Rout' to 'test05-spca.Rout.save' ... OK Running 'test06-mosaic.R' Comparing 'test06-mosaic.Rout' to 'test06-mosaic.Rout.save' ... OK Running 'test07-pcanova.R' Comparing 'test07-pcanova.Rout' to 'test07-pcanova.Rout.save' ... OK OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'maha-test.Rnw'... OK 'oompa-cd.Rnw'... OK OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK