* using log directory 'C:/msys64/home/tomas/utf/ucrt64/inst_all/AQuadtree.Rcheck' * using R Under development (unstable) (2020-06-23 r78739) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'AQuadtree/DESCRIPTION' ... OK * this is package 'AQuadtree' version '1.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'AQuadtree' can be installed ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'AQuadtree-Ex.R' failed The error most likely occurred in: > ### Name: AQuadtree-class > ### Title: Class "AQuadtree". > ### Aliases: AQuadtree-class AQuadtree > > ### ** Examples > > data("BarcelonaPop", "BarcelonaCensusTracts") > aquadtree.Barcelona<-AQuadtree(BarcelonaPop, layers = 3) layer:1 Warning: `summarise_()` is deprecated as of dplyr 0.7.0. Please use `summarise()` instead. This warning is displayed once every 8 hours. Call `lifecycle::last_warnings()` to see where this warning was generated. layer:2 layer:3 Warning in showSRID(uprojargs, format = "PROJ", multiline = "NO") : Discarded datum Unknown based on GRS80 ellipsoid in CRS definition, but +towgs84= values preserved > plot(aquadtree.Barcelona) > > aQuadtree.Charleston<-AQuadtree(CharlestonPop, colnames="sex", threshold=17, + thresholdField=c("sex.male", "sex.female")) layer:1 layer:2 layer:3 Error in showSRID(uprojargs, format = "PROJ", multiline = "NO") : Can't parse PROJ.4-style parameter string +init=epsg:26978 +proj=lcc +lat_1=38.56666666666667 +lat_2=37.26666666666667 +lat_0=36.66666666666666 +lon_0=-98.5 +x_0=400000 +y_0=400000 +datum=NAD83 +units=m +no_defs +ellps=GRS80 +towgs84=0,0,0 Calls: AQuadtree ... SpatialPolygons -> stopifnot -> is -> CRS -> -> showSRID Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'AQuadtreeUse.Rmd' using 'UTF-8'... OK NONE * checking re-building of vignette outputs ... WARNING Error(s) in re-building vignettes: ... --- re-building 'AQuadtreeUse.Rmd' using rmarkdown Warning in engine$weave(file, quiet = quiet, encoding = enc) : Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1. layer:1 Warning: `summarise_()` is deprecated as of dplyr 0.7.0. Please use `summarise()` instead. This warning is displayed once every 8 hours. Call `lifecycle::last_warnings()` to see where this warning was generated. layer:2 Quitting from lines 97-99 (AQuadtreeUse.Rmd) Error: processing vignette 'AQuadtreeUse.Rmd' failed with diagnostics: Can't parse PROJ.4-style parameter string +init=epsg:26978 +proj=lcc +lat_1=38.56666666666667 +lat_2=37.26666666666667 +lat_0=36.66666666666666 +lon_0=-98.5 +x_0=400000 +y_0=400000 +datum=NAD83 +units=m +no_defs +ellps=GRS80 +towgs84=0,0,0 --- failed re-building 'AQuadtreeUse.Rmd' SUMMARY: processing the following file failed: 'AQuadtreeUse.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR, 1 WARNING See 'C:/msys64/home/tomas/utf/ucrt64/inst_all/AQuadtree.Rcheck/00check.log' for details.