Running ‘testthat.R’ [90m/53m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > 
  > test_check("ngme2")
  Loading required package: ngme2
  This is ngme2 of version 0.9.8
  - See our homepage: https://davidbolin.github.io/ngme2 for more details.
  
  Attaching package: 'ngme2'
  
  The following object is masked from 'package:stats':
  
      ar
  
  List of 6
   $ mean  : num [1:3] -1.755 0.704 -2.292
   $ sd    : num [1:3] 0.667 0.682 0.795
   $ 0.05q : num [1:3] -2.846 -0.371 -3.62
   $ 0.95q : num [1:3] -0.541 1.912 -1.037
   $ median: num [1:3] -1.755 0.716 -2.298
   $ mode  : num [1:3] -1.7 1.1 -2.3
   - attr(*, "samples")= num [1:10, 1:500] -1.93 -2.62 -3.17 -2.01 1.51 ...
  Starting estimation...
  iteration = : 1
  grad.norm() = 499.864
  pflug_sum = 0, max_pflug_sum = 0
  ---------------------------
  iteration = : 2
  grad.norm() = 481.289
  pflug_sum = 239624, max_pflug_sum = 239624
  ---------------------------
  iteration = : 3
  grad.norm() = 455.664
  pflug_sum = 458335, max_pflug_sum = 458335
  ---------------------------
  iteration = : 4
  grad.norm() = 439.934
  pflug_sum = 657041, max_pflug_sum = 657041
  ---------------------------
  iteration = : 5
  grad.norm() = 412.221
  pflug_sum = 837994, max_pflug_sum = 837994
  ---------------------------
  iteration = : 6
  grad.norm() = 385.743
  pflug_sum = 996613, max_pflug_sum = 996613
  ---------------------------
  iteration = : 7
  grad.norm() = 353.401
  pflug_sum = 1.13076e+06, max_pflug_sum = 1.13076e+06
  ---------------------------
  iteration = : 8
  grad.norm() = 322.673
  pflug_sum = 1.2421e+06, max_pflug_sum = 1.2421e+06
  ---------------------------
  iteration = : 9
  grad.norm() = 286.7
  pflug_sum = 1.33377e+06, max_pflug_sum = 1.33377e+06
  ---------------------------
  iteration = : 10
  grad.norm() = 250.516
  pflug_sum = 1.40503e+06, max_pflug_sum = 1.40503e+06
  ---------------------------
  Starting posterior sampling...
  Posterior sampling done.
  Average standard deviation of the posterior W: 0.240205555934909
  Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters.
  OMP: Warning #96: Cannot form a team with 28 threads, using 2 instead.
  OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).