Error(s) in re-building vignettes:
  ...
--- re-building ‘archetypes.Rnw’ using Sweave
Loading required package: modeltools
Loading required package: stats4
Loading required package: nnls
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in method(..., k = k[i]) :
  k=4: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=5: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=5: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=5: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=6: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=6: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=6: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=6: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=7: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=7: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=7: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=8: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=8: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=8: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=8: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=9: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=9: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=9: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=9: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=10: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=10: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=10: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in method(..., k = k[i]) :
  k=10: Error in qr.solve(alphas %*% t(alphas)): singular matrix 'a' in solve

Warning in axis(1, at = a, ...) : "axes" is not a graphical parameter
Warning in method(..., k = k[i]) : k=4: alphas > maxKappa
Warning in method(..., k = k[i]) : k=5: alphas > maxKappa
Warning in method(..., k = k[i]) : k=5: alphas > maxKappa
Warning in method(..., k = k[i]) : k=5: alphas > maxKappa
Warning in method(..., k = k[i]) : k=6: alphas, betas > maxKappa
Warning in method(..., k = k[i]) : k=6: alphas > maxKappa
Warning in method(..., k = k[i]) : k=6: alphas > maxKappa
Warning in method(..., k = k[i]) : k=6: alphas > maxKappa
Warning in method(..., k = k[i]) : k=7: alphas > maxKappa
Warning in method(..., k = k[i]) : k=7: alphas > maxKappa
Warning in method(..., k = k[i]) : k=7: alphas > maxKappa
Warning in method(..., k = k[i]) : k=8: alphas > maxKappa
Warning in method(..., k = k[i]) : k=8: alphas > maxKappa
Warning in method(..., k = k[i]) : k=8: alphas > maxKappa
Warning in method(..., k = k[i]) : k=8: alphas > maxKappa
Warning in method(..., k = k[i]) : k=9: alphas > maxKappa
Warning in method(..., k = k[i]) : k=9: alphas > maxKappa
Warning in method(..., k = k[i]) : k=9: alphas > maxKappa
Warning in method(..., k = k[i]) : k=9: alphas > maxKappa
Warning in method(..., k = k[i]) : k=10: alphas > maxKappa
Warning in method(..., k = k[i]) : k=10: alphas > maxKappa
Warning in method(..., k = k[i]) : k=10: alphas > maxKappa
Warning in method(..., k = k[i]) : k=10: alphas, betas > maxKappa
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in plot.xy(xy.coords(x, y), type = type, ...) :
  "axes" is not a graphical parameter
Warning in method(..., k = k[i]) : k=11: zs > maxKappa
Warning in method(..., k = k[i]) : k=11: zs > maxKappa
Warning in method(..., k = k[i]) : k=12: zs > maxKappa
Warning in method(..., k = k[i]) : k=12: zs > maxKappa
Warning in method(..., k = k[i]) : k=12: zs > maxKappa
Warning in method(..., k = k[i]) : k=13: zs > maxKappa
Warning in method(..., k = k[i]) : k=13: zs > maxKappa
Warning in method(..., k = k[i]) : k=13: zs > maxKappa
Warning in method(..., k = k[i]) : k=14: zs > maxKappa
Warning in method(..., k = k[i]) : k=14: zs > maxKappa
Warning in method(..., k = k[i]) : k=14: zs > maxKappa
Warning in method(..., k = k[i]) : k=15: zs > maxKappa
Warning in axis(1, at = a, ...) : "axes" is not a graphical parameter
Loading required package: grid
Error: processing vignette 'archetypes.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'archetypes.tex' failed.
LaTeX errors:
! Undefined control sequence.
<argument> cite.\@citeb 
                        \@extra@b@citeb 
l.71 \begin{document}
                     
! Emergency stop.
<argument> cite.\@citeb 
                        \@extra@b@citeb 
l.71 \begin{document}
                     
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘archetypes.Rnw’

SUMMARY: processing the following file failed:
  ‘archetypes.Rnw’

Error: Vignette re-building failed.
Execution halted