Error(s) in re-building vignettes:
  ...
--- re-building ‘a_complete_example.Rmd’ using rmarkdown
--- finished re-building ‘a_complete_example.Rmd’

--- re-building ‘a_simple_example.Rmd’ using rmarkdown
--- finished re-building ‘a_simple_example.Rmd’

--- re-building ‘alluvial_plots.Rmd’ using rmarkdown

Quitting from alluvial_plots.Rmd:92-102 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'ggalluvial'
---
Backtrace:
    ▆
 1. ├─metasnf::alluvial_cluster_plot(...)
 2. └─base::loadNamespace(x)
 3.   └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
 4.     └─base (local) withOneRestart(expr, restarts[[1L]])
 5.       └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'alluvial_plots.Rmd' failed with diagnostics:
there is no package called 'ggalluvial'
--- failed re-building ‘alluvial_plots.Rmd’

--- re-building ‘clustering_algorithms.Rmd’ using rmarkdown
--- finished re-building ‘clustering_algorithms.Rmd’

--- re-building ‘confounders.Rmd’ using rmarkdown
--- finished re-building ‘confounders.Rmd’

--- re-building ‘correlation_plots.Rmd’ using rmarkdown
--- finished re-building ‘correlation_plots.Rmd’

--- re-building ‘data_list.Rmd’ using rmarkdown
--- finished re-building ‘data_list.Rmd’

--- re-building ‘distance_metrics.Rmd’ using rmarkdown
--- finished re-building ‘distance_metrics.Rmd’

--- re-building ‘feature_plots.Rmd’ using rmarkdown
--- finished re-building ‘feature_plots.Rmd’

--- re-building ‘feature_weights.Rmd’ using rmarkdown
--- finished re-building ‘feature_weights.Rmd’

--- re-building ‘getting_started.Rmd’ using rmarkdown
--- finished re-building ‘getting_started.Rmd’

--- re-building ‘imputations.Rmd’ using rmarkdown
--- finished re-building ‘imputations.Rmd’

--- re-building ‘label_propagation.Rmd’ using rmarkdown
--- finished re-building ‘label_propagation.Rmd’

--- re-building ‘manhattan_plots.Rmd’ using rmarkdown
--- finished re-building ‘manhattan_plots.Rmd’

--- re-building ‘nmi_scores.Rmd’ using rmarkdown
--- finished re-building ‘nmi_scores.Rmd’

--- re-building ‘parallel_processing.Rmd’ using rmarkdown
--- finished re-building ‘parallel_processing.Rmd’

--- re-building ‘quality_measures.Rmd’ using rmarkdown
--- finished re-building ‘quality_measures.Rmd’

--- re-building ‘similarity_matrix_heatmap.Rmd’ using rmarkdown
--- finished re-building ‘similarity_matrix_heatmap.Rmd’

--- re-building ‘snf_config.Rmd’ using rmarkdown
--- finished re-building ‘snf_config.Rmd’

--- re-building ‘snf_schemes.Rmd’ using rmarkdown
--- finished re-building ‘snf_schemes.Rmd’

--- re-building ‘stability_measures.Rmd’ using rmarkdown
--- finished re-building ‘stability_measures.Rmd’

--- re-building ‘troubleshooting.Rmd’ using rmarkdown
--- finished re-building ‘troubleshooting.Rmd’

SUMMARY: processing the following file failed:
  ‘alluvial_plots.Rmd’

Error: Vignette re-building failed.
Execution halted