Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(bioseq)
  > 
  > test_check("bioseq")
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f642e1d9a: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f10a06647: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f2267ffdc: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f7305b896: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f7448648f: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f36dd8801: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f2e7dc69c: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f48d1ff40: Permission denied
  sh: 1: /tmp/RtmpcIi3OZ/file27ee0f576267a6: Permission denied
  Saving _problems/test-print-methods-20.R
  Saving _problems/test-read-write-fasta-114.R
  [ FAIL 2 | WARN 3 | SKIP 0 | PASS 226 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-print-methods.R:20:3'): AA prints correctly ────────────────────
  Error in `file(file, if (append) "a" else "w")`: cannot open the connection
  Backtrace:
       ▆
    1. └─testthat::expect_output(print(test), "AA vector of 3 sequences") at test-print-methods.R:20:3
    2.   └─testthat:::quasi_capture(...)
    3.     └─testthat (local) .capture(...)
    4.       └─testthat::capture_output_lines(code, print, width = width)
    5.         └─testthat:::eval_with_output(code, print = print, width = width)
    6.           └─withr::with_output_sink(path, withVisible(code))
    7.             └─withr:::set_output_sink(file = new, append = append, split = split)
    8.               └─withr:::output_sink(file = file, append = append, split = split)
    9.                 └─base::sink(file = file, append = append, type = "output", split = split)
   10.                   └─base::file(file, if (append) "a" else "w")
  ── Error ('test-read-write-fasta.R:114:3'): Read/write fasta works with block and line length arguments ──
  Error in `open.connection(file, "wb")`: cannot open the connection
  Backtrace:
      ▆
   1. └─bioseq::write_fasta(...) at test-read-write-fasta.R:114:3
   2.   └─readr::write_file(fas, file, append = append)
   3.     ├─base::open(file, "wb")
   4.     └─base::open.connection(file, "wb")
  
  [ FAIL 2 | WARN 3 | SKIP 0 | PASS 226 ]
  Error:
  ! Test failures.
  Execution halted