Running ‘testthat.R’ [90m/54m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > 
  > test_check("ngme2")
  Loading required package: ngme2
  This is ngme2 of version 0.9.7
  - See our homepage: https://davidbolin.github.io/ngme2 for more details.
  
  Attaching package: 'ngme2'
  
  The following object is masked from 'package:stats':
  
      ar
  
  List of 6
   $ mean  : num [1:3] -1.686 0.684 -2.357
   $ sd    : num [1:3] 0.657 0.717 0.786
   $ 0.05q : num [1:3] -2.76 -0.41 -3.71
   $ 0.95q : num [1:3] -0.642 1.921 -1.076
   $ median: num [1:3] -1.71 0.664 -2.376
   $ mode  : num [1:3] -2.1 0.5 -2.7
   - attr(*, "samples")= num [1:10, 1:500] -2.888 -2.967 -2.52 -0.211 3.731 ...
  Starting estimation...
  iteration = : 1
  grad.norm() = 503.184
  pflug_sum = 0, max_pflug_sum = 0
  ---------------------------
  iteration = : 2
  grad.norm() = 480.572
  pflug_sum = 241171, max_pflug_sum = 241171
  ---------------------------
  iteration = : 3
  grad.norm() = 464.919
  pflug_sum = 463618, max_pflug_sum = 463618
  ---------------------------
  iteration = : 4
  grad.norm() = 443.545
  pflug_sum = 666390, max_pflug_sum = 666390
  ---------------------------
  iteration = : 5
  grad.norm() = 419.862
  pflug_sum = 850475, max_pflug_sum = 850475
  ---------------------------
  iteration = : 6
  grad.norm() = 394.671
  pflug_sum = 1.01523e+06, max_pflug_sum = 1.01523e+06
  ---------------------------
  iteration = : 7
  grad.norm() = 365.523
  pflug_sum = 1.15867e+06, max_pflug_sum = 1.15867e+06
  ---------------------------
  iteration = : 8
  grad.norm() = 336.204
  pflug_sum = 1.28072e+06, max_pflug_sum = 1.28072e+06
  ---------------------------
  iteration = : 9
  grad.norm() = 297.288
  pflug_sum = 1.38002e+06, max_pflug_sum = 1.38002e+06
  ---------------------------
  iteration = : 10
  grad.norm() = 268.961
  pflug_sum = 1.45786e+06, max_pflug_sum = 1.45786e+06
  ---------------------------
  Starting posterior sampling...
  Posterior sampling done.
  Average standard deviation of the posterior W: 0.341100883868841
  Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters.
  OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead.
  OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).