Running 'testthat.R' [111s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(simDAG)
  > library(testthat)
  > library(data.table)
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  > library(igraph)
  
  Attaching package: 'igraph'
  
  The following object is masked from 'package:testthat':
  
      compare
  
  The following objects are masked from 'package:stats':
  
      decompose, spectrum
  
  The following object is masked from 'package:base':
  
      union
  
  > library(ggdag)
  
  Attaching package: 'ggdag'
  
  The following object is masked from 'package:stats':
  
      filter
  
  > 
  > data.table::setDTthreads(1)
  > 
  > test_check("simDAG")
  Saving _problems/test_network-458.R
  Saving _problems/test_node_lmer-15.R
  Saving _problems/test_node_lmer-46.R
  Saving _problems/test_node_lmer-79.R
  Saving _problems/test_node_lmer-172.R
  Saving _problems/test_node_lmer-202.R
  Saving _problems/test_node_lmer-233.R
  Saving _problems/test_node_lmer-266.R
  Saving _problems/test_node_lmer-294.R
  Saving _problems/test_node_lmer-308.R
  Saving _problems/test_node_lmer-363.R
  Saving _problems/test_node_lmer-387.R
  t = 1 node = sickness2
  t = 1 node = sickness1
  t = 2 node = sickness2
  t = 2 node = sickness1
  t = 3 node = sickness2
  t = 3 node = sickness1
  t = 4 node = sickness2
  t = 4 node = sickness1
  t = 5 node = sickness2
  t = 5 node = sickness1
  starting worker pid=85480 on localhost:11030 at 18:25:04.989
  starting worker pid=59564 on localhost:11030 at 18:25:05.005
  
    |                                                                            
    |                                                                      |   0%Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  
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    |======================================================================| 100%starting worker pid=31132 on localhost:11030 at 18:25:07.677
  starting worker pid=61748 on localhost:11030 at 18:25:07.680
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  starting worker pid=67408 on localhost:11030 at 18:25:11.006
  starting worker pid=86028 on localhost:11030 at 18:25:11.038
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: simDAG
  loaded simDAG and set parent environment
  Loading required package: rngtools
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  starting worker pid=83176 on localhost:11030 at 18:25:14.920
  starting worker pid=71432 on localhost:11030 at 18:25:14.934
  
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    |                                                                      |   0%Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  
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    |======================================================================| 100%starting worker pid=54192 on localhost:11030 at 18:25:18.181
  starting worker pid=36216 on localhost:11030 at 18:25:18.210
  
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    |                                                                      |   0%Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  
    |                                                                            
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    |======================================================================| 100%starting worker pid=74880 on localhost:11030 at 18:25:20.807
  starting worker pid=17280 on localhost:11030 at 18:25:20.809
  
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    |                                                                      |   0%Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  Loading required package: simDAG
  loaded simDAG and set parent environment
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  Loading required package: foreach
  Loading required package: rngtools
  
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    |======================================================================| 100%[ FAIL 12 | WARN 14 | SKIP 54 | PASS 1012 ]
  
  ══ Skipped tests (54) ══════════════════════════════════════════════════════════
  • On CRAN (54): 'test_DAG.network_S3.r:4:1', 'test_DAG.network_S3.r:10:1',
    'test_DAG.network_S3.r:18:1', 'test_DAG.network_S3.r:24:1',
    'test_DAG.network_S3.r:32:1', 'test_DAG.network_S3.r:44:1',
    'test_DAG.network_S3.r:50:1', 'test_DAG.network_S3.r:58:1',
    'test_DAG.network_S3.r:64:1', 'test_DAG.network_S3.r:72:1',
    'test_DAG.node_S3.r:4:1', 'test_DAG.node_S3.r:9:1',
    'test_DAG.node_S3.r:14:1', 'test_DAG.node_S3.r:19:1',
    'test_DAG.node_S3.r:24:1', 'test_DAG.node_S3.r:32:1',
    'test_DAG.node_S3.r:37:1', 'test_DAG.node_S3.r:42:1',
    'test_DAG.node_S3.r:47:1', 'test_DAG.node_S3.r:52:1', 'test_dag.r:14:1',
    'test_dag.r:21:1', 'test_dag.r:34:1', 'test_dag.r:44:1', 'test_dag.r:51:1',
    'test_dag.r:64:1', 'test_node.r:548:1', 'test_plot.DAG.r:11:1',
    'test_plot.DAG.r:15:1', 'test_plot.DAG.r:19:1', 'test_plot.DAG.r:23:1',
    'test_plot.DAG.r:27:1', 'test_plot.DAG.r:31:1', 'test_plot.DAG.r:35:1',
    'test_plot.DAG.r:40:1', 'test_plot.DAG.r:44:1', 'test_plot.DAG.r:52:1',
    'test_plot.DAG.r:59:1', 'test_plot.DAG.r:64:1', 'test_plot.DAG.r:69:1',
    'test_plot.DAG.r:100:1', 'test_plot.DAG.r:104:1', 'test_plot.DAG.r:108:1',
    'test_plot.simDT.r:24:1', 'test_plot.simDT.r:28:1', 'test_plot.simDT.r:32:1',
    'test_plot.simDT.r:36:1', 'test_plot.simDT.r:40:1', 'test_plot.simDT.r:48:1',
    'test_plot.simDT.r:56:1', 'test_simDT_S3.r:11:1', 'test_simDT_S3.r:15:1',
    'test_simDT_S3.r:20:1', 'test_simDT_S3.r:25:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test_network.r:458:3'): mixing net() and mixed terms in formula syntax ──
  Expected `round(mean(data$Y), 3)` to equal `-5.3`.
  Differences:
    `actual`: -5.3020
  `expected`: -5.3000
  
  ── Failure ('test_node_lmer.r:15:3'): simple random effect ─────────────────────
  Expected `round(mean(data$Y), 3)` to equal `-1.99`.
  Differences:
    `actual`: -1.9950
  `expected`: -1.9900
  
  ── Failure ('test_node_lmer.r:46:3'): simple random effect in disrete-time simulation ──
  Expected `round(mean(data$Y), 3)` to equal `-1.852`.
  Differences:
    `actual`: -1.864
  `expected`: -1.852
  
  ── Failure ('test_node_lmer.r:79:3'): simple random effect + categorical fixed effect ──
  Expected `round(mean(data$Y), 3)` to equal `-0.513`.
  Differences:
    `actual`: -0.5190
  `expected`: -0.5130
  
  ── Failure ('test_node_lmer.r:172:3'): simple random effect + cubic terms ──────
  Expected `round(mean(data$Y), 3)` to equal `-1.797`.
  Differences:
    `actual`: -1.8020
  `expected`: -1.7970
  
  ── Failure ('test_node_lmer.r:202:3'): simple random effect + ONLY cubic terms ──
  Expected `round(mean(data$Y), 3)` to equal `-1.851`.
  Differences:
    `actual`: -1.8560
  `expected`: -1.8510
  
  ── Failure ('test_node_lmer.r:233:3'): multiple random effects ─────────────────
  Expected `round(mean(data$Y), 3)` to equal `-2.179`.
  Differences:
    `actual`: -2.1780
  `expected`: -2.1790
  
  ── Failure ('test_node_lmer.r:266:3'): with random effects and random slopes ───
  Expected `round(mean(data$Y), 3)` to equal `-1.974`.
  Differences:
    `actual`: -1.9790
  `expected`: -1.9740
  
  ── Failure ('test_node_lmer.r:294:3'): mixed model term with + in it ───────────
  Expected `round(mean(data$Y), 3)` to equal `-2.365`.
  Differences:
    `actual`: -2.3610
  `expected`: -2.3650
  
  ── Failure ('test_node_lmer.r:308:3'): works with function input ───────────────
  Expected `round(mean(data$Y), 3)` to equal `-2.365`.
  Differences:
    `actual`: -2.3610
  `expected`: -2.3650
  
  ── Failure ('test_node_lmer.r:363:3'): random effects with net() syntax ────────
  Expected `round(mean(data$Y), 3)` to equal `-5.299`.
  Differences:
    `actual`: -5.3000
  `expected`: -5.2990
  
  ── Failure ('test_node_lmer.r:387:3'): simple random effect with non-default link ──
  Expected `round(mean(data$Y), 3)` to equal `-1.99`.
  Differences:
    `actual`: -1.9950
  `expected`: -1.9900
  
  
  [ FAIL 12 | WARN 14 | SKIP 54 | PASS 1012 ]
  Error:
  ! Test failures.
  Execution halted