Error(s) in re-building vignettes:
--- re-building ‘Tutorial.Rmd’ using rmarkdown
[gannet:75281:0:75281] Caught signal 11 (Segmentation fault: Sent by the kernel at address (nil))
==== backtrace (tid:  75281) ====
 0  /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7f46b6be7df4]
 1  /lib64/libucs.so.0(+0x17aed) [0x7f46b6be9aed]
 2  /lib64/libucs.so.0(+0x17cbd) [0x7f46b6be9cbd]
 3  /lib64/libc.so.6(+0x19c30) [0x7f46cd326c30]
 4  /data/gannet/ripley/R/R-clang/bin/exec/R(ALTREP_LENGTH+0x4) [0x558729afbed4]
 5  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x194f1f) [0x558729c7df1f]
 6  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x191add) [0x558729c7aadd]
 7  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xd31cd) [0x558729bbc1cd]
 8  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
 9  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
10  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
11  /data/gannet/ripley/R/R-clang/bin/exec/R(R_execMethod+0x2cb) [0x558729bca65b]
12  /data/gannet/ripley/R/R-clang/library/methods/libs/methods.so(+0x175b) [0x7f46cdff075b]
13  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x12d4ca) [0x558729c164ca]
14  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd4b3) [0x558729bb64b3]
15  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
16  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
17  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
18  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xddd4c) [0x558729bc6d4c]
19  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc7956) [0x558729bb0956]
20  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x12e187) [0x558729c17187]
21  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe5dae) [0x558729bcedae]
22  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x1916a2) [0x558729c7a6a2]
23  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x1914ef) [0x558729c7a4ef]
24  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x558729baf9e0]
25  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe43c1) [0x558729bcd3c1]
26  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x558729baf9e0]
27  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe51e8) [0x558729bce1e8]
28  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcdca4) [0x558729bb6ca4]
29  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
30  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
31  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc7284) [0x558729bb0284]
32  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x26e) [0x558729baf87e]
33  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe56c7) [0x558729bce6c7]
34  /data/gannet/ripley/R/R-clang/bin/exec/R(+0x128738) [0x558729c11738]
35  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcdf06) [0x558729bb6f06]
36  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
37  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
38  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc7284) [0x558729bb0284]
39  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x26e) [0x558729baf87e]
40  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc7284) [0x558729bb0284]
41  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdafe0) [0x558729bc3fe0]
42  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcb6b9) [0x558729bb46b9]
43  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
44  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
45  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
46  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xddd4c) [0x558729bc6d4c]
47  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f6) [0x558729bafc06]
48  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe51e8) [0x558729bce1e8]
49  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcdca4) [0x558729bb6ca4]
50  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
51  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
52  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
53  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xddd4c) [0x558729bc6d4c]
54  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f6) [0x558729bafc06]
55  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
56  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xddd4c) [0x558729bc6d4c]
57  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd533) [0x558729bb6533]
58  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc702c) [0x558729bb002c]
59  /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x558729baf7b5]
60  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xde849) [0x558729bc7849]
61  /data/gannet/ripley/R/R-clang/bin/exec/R(+0xddd4c) [0x558729bc6d4c]
=================================

 *** caught segfault ***
address 0x4d200012611, cause 'unknown'

Traceback:
 1: .replace_all(x, value)
 2: .local(x, i, j, ..., value = value)
 3: `[<-`(`*tmp*`, , value = new("SpatRaster", pntr = new("Rcpp_SpatRaster",     .xData = <environment>)))
 4: `[<-`(`*tmp*`, , value = new("SpatRaster", pntr = new("Rcpp_SpatRaster",     .xData = <environment>)))
 5: eval(expr, envir)
 6: eval(expr, envir)
 7: withVisible(eval(expr, envir))
 8: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) {    watcher$capture_plot_and_output()    if (on_message$capture) {        watcher$push(cnd)    }    if (on_message$silence) {        invokeRestart("muffleMessage")    }}, warning = function (cnd) {    if (getOption("warn") >= 2 || getOption("warn") < 0) {        return()    }    watcher$capture_plot_and_output()    if (on_warning$capture) {        cnd <- sanitize_call(cnd)        watcher$push(cnd)    }    if (on_warning$silence) {        invokeRestart("muffleWarning")    }}, error = function (cnd) {    watcher$capture_plot_and_output()    cnd <- sanitize_call(cnd)    watcher$push(cnd)    switch(on_error, continue = invokeRestart("eval_continue"),         stop = invokeRestart("eval_stop"), error = NULL)})
 9: eval(call)
10: eval(call)
11: with_handlers({    for (expr in tle$exprs) {        ev <- withVisible(eval(expr, envir))        watcher$capture_plot_and_output()        watcher$print_value(ev$value, ev$visible, envir)    }    TRUE}, handlers)
12: doWithOneRestart(return(expr), restart)
13: withOneRestart(expr, restarts[[1L]])
14: withRestartList(expr, restarts[-nr])
15: doWithOneRestart(return(expr), restart)
16: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
17: withRestartList(expr, restarts)
18: withRestarts(with_handlers({    for (expr in tle$exprs) {        ev <- withVisible(eval(expr, envir))        watcher$capture_plot_and_output()        watcher$print_value(ev$value, ev$visible, envir)    }    TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE)
19: evaluate::evaluate(...)
20: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning,     keep_message = if (is.numeric(options$message)) TRUE else options$message,     stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options))
21: in_dir(input_dir(), expr)
22: in_input_dir(evaluate(code, envir = env, new_device = FALSE,     keep_warning = if (is.numeric(options$warning)) TRUE else options$warning,     keep_message = if (is.numeric(options$message)) TRUE else options$message,     stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options)))
23: eng_r(options)
24: block_exec(params)
25: call_block(x)
26: process_group(group)
27: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        if (progress && is.function(pb$interrupt))             pb$interrupt()        if (is_R_CMD_build() || is_R_CMD_check())             error <<- format(e)    })
28: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        if (progress && is.function(pb$interrupt))             pb$interrupt()        if (is_R_CMD_build() || is_R_CMD_check())             error <<- format(e)    }), list(rlang_trace_top_env = knit_global()))
29: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        if (progress && is.function(pb$interrupt))             pb$interrupt()        if (is_R_CMD_build() || is_R_CMD_check())             error <<- format(e)    }), list(rlang_trace_top_env = knit_global())), function(loc) {    setwd(wd)    write_utf8(res, output %n% stdout())    paste0("\nQuitting from ", loc, if (!is.null(error))         paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
30: process_file(text, output)
31: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
32: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(),     output_dir = getwd(), ...)
33: vweave_rmarkdown(...)
34: engine$weave(file, quiet = quiet, encoding = enc)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
38: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    output <- find_vignette_product(name, by = "weave", engine = engine)    if (!have.makefile && vignette_is_tex(output)) {        texi2pdf(file = output, clean = FALSE, quiet = quiet)        output <- find_vignette_product(name, by = "texi2pdf",             engine = engine)    }    outputs <- c(outputs, output)}, error = function(e) {    thisOK <<- FALSE    fails <<- c(fails, file)    message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)))})
39: tools::buildVignettes(dir = "/data/gannet/ripley/R/packages/tests-clang/spacemodR.Rcheck/vign_test/spacemodR",     skip = TRUE, ser_elibs = "/tmp/Rtmpr8UyFM/file52cb67ce5b15.rds")
An irrecoverable exception occurred. R is aborting now ...