Running 'testthat.R' [159s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat);
  > library(ApplyPolygenicScore);
  > 
  > test_check('ApplyPolygenicScore');
  Input data passed validation
  Input data passed validation
  Skipping test for >12 PGS columns as 'scales' package is available and will be used.
  [1] "springgreen3"
  [1] "darkturquoise"
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  [1] "springgreen3"
  [1] "darkturquoise"
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  Saving _problems/test-vcf-import-266.R
  Saving _problems/test-vcf-import-270.R
  [ FAIL 2 | WARN 87 | SKIP 0 | PASS 653 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-vcf-import.R:263:9'): import.vcf accurately imports INFO fields ──
  Expected `ncol(select.info.test.vcf$dat)` to equal `ncol.select`.
  Differences:
    `actual`: 19.0
  `expected`: 18.0
  
  ── Failure ('test-vcf-import.R:267:9'): import.vcf accurately imports INFO fields ──
  Expected `ncol(all.info.test.vcf$dat)` to equal `ncol.all`.
  Differences:
    `actual`: 32.0
  `expected`: 31.0
  
  
  [ FAIL 2 | WARN 87 | SKIP 0 | PASS 653 ]
  Error:
  ! Test failures.
  Execution halted