Error(s) in re-building vignettes:
--- re-building ‘EZDynamics.Rmd’ using rmarkdown

Quitting from EZDynamics.Rmd:68-103 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo)
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo)
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EZDynamics.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘EZDynamics.Rmd’

--- re-building ‘EZQC.Rmd’ using rmarkdown

Quitting from EZQC.Rmd:37-50 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EZQC(ezbdo)
 2. └─EZbakR:::EZQC.EZbakRData(ezbdo)
 3.   ├─EZbakR::EstimateMutRates(obj, populations = mutrate_populations)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(obj, populations = mutrate_populations)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EZQC.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘EZQC.Rmd’

--- re-building ‘EZget.Rmd’ using rmarkdown

Quitting from EZget.Rmd:33-49 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo)
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo)
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EZget.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘EZget.Rmd’

--- re-building ‘EstimateFractions.Rmd’ using rmarkdown

Quitting from EstimateFractions.Rmd:52-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo, features = "feature")
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo, features = "feature")
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EstimateFractions.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘EstimateFractions.Rmd’

--- re-building ‘EstimateKinetics.Rmd’ using rmarkdown

Quitting from EstimateKinetics.Rmd:39-52 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo)
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo)
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EstimateKinetics.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘EstimateKinetics.Rmd’

--- re-building ‘Linear-modeling.Rmd’ using rmarkdown

Quitting from Linear-modeling.Rmd:74-125 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo)
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo)
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Linear-modeling.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘Linear-modeling.Rmd’

--- re-building ‘Quickstart.Rmd’ using rmarkdown

Quitting from Quickstart.Rmd:134-141 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
    ▆
 1. ├─EZbakR::EstimateFractions(ezbdo, features = "feature")
 2. └─EZbakR:::EstimateFractions.EZbakRData(ezbdo, features = "feature")
 3.   ├─EZbakR::EstimateMutRates(...)
 4.   └─EZbakR:::EstimateMutRates.EZbakRData(...)
 5.     ├─...[]
 6.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Quickstart.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘Quickstart.Rmd’

SUMMARY: processing the following files failed:
  ‘EZDynamics.Rmd’ ‘EZQC.Rmd’ ‘EZget.Rmd’ ‘EstimateFractions.Rmd’
  ‘EstimateKinetics.Rmd’ ‘Linear-modeling.Rmd’ ‘Quickstart.Rmd’

Error: Vignette re-building failed.
Execution halted