Running ‘testthat.R’ [16m/90m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(JANE)
  
  +-------------------------------------------+
  |    ___  ________  ________   _______      |
  |   |\  \|\   __  \|\   ___  \|\  ___ \     |
  |   \ \  \ \  \|\  \ \  \\ \  \ \   __/|    |
  | __ \ \  \ \   __  \ \  \\ \  \ \  \_|/__  |
  ||\  \\_\  \ \  \ \  \ \  \\ \  \ \  \_|\ \ |
  |\ \________\ \__\ \__\ \__\\ \__\ \_______\|
  | \|________|\|__|\|__|\|__| \|__|\|_______||
  +-------------------------------------------+  version 2.1.0
  Type 'citation("JANE")' for citing this R package in publications.
  > 
  > test_check("JANE")
  7 isolate(s) removed
  $BIC_model
  [1] 4707.572
  
  $BIC_mbc
  [1] 314.4298
  
  $ICL_mbc
  [1] 314.4298
  
  $Total_BIC
  [1] 5022.002
  
  $Total_ICL
  [1] 5022.002
  
  4 isolate(s) removed
  $BIC_model
  [1] 3608.544
  
  $BIC_mbc
  [1] 274.4463
  
  $ICL_mbc
  [1] 274.4463
  
  $Total_BIC
  [1] 3882.99
  
  $Total_ICL
  [1] 3882.99
  
  1 isolate(s) removed
  $BIC_model
  [1] 6943.171
  
  $BIC_mbc
  [1] 552.4021
  
  $ICL_mbc
  [1] 552.4021
  
  $Total_BIC
  [1] 7495.574
  
  $Total_ICL
  [1] 7495.574
  
  2 isolate(s) removed
  $BIC_model
  [1] 6027.077
  
  $BIC_mbc
  [1] 397.5365
  
  $ICL_mbc
  [1] 397.5365
  
  $Total_BIC
  [1] 6424.614
  
  $Total_ICL
  [1] 6424.614
  
  8 isolate(s) removed
  $BIC_model
  [1] 5588.837
  
  $BIC_mbc
  [1] 135.4871
  
  $ICL_mbc
  [1] 135.4871
  
  $Total_BIC
  [1] 5724.324
  
  $Total_ICL
  [1] 5724.324
  
  No isolates to remove
  $BIC_model
  [1] 15732.11
  
  $BIC_mbc
  [1] -296.6752
  
  $ICL_mbc
  [1] -296.6752
  
  $Total_BIC
  [1] 15435.44
  
  $Total_ICL
  [1] 15435.44
  
  3 isolate(s) removed
  $BIC_model
  [1] 3753.492
  
  $BIC_mbc
  [1] 219.868
  
  $ICL_mbc
  [1] 219.868
  
  $Total_BIC
  [1] 3973.36
  
  $Total_ICL
  [1] 3973.36
  
  4 isolate(s) removed
  $BIC_model
  [1] -34952.86
  
  $BIC_mbc
  [1] 241.6288
  
  $ICL_mbc
  [1] 241.6288
  
  $Total_BIC
  [1] -34711.23
  
  $Total_ICL
  [1] -34711.23
  
  1 isolate(s) removed
  $BIC_model
  [1] -29971.03
  
  $BIC_mbc
  [1] 263.3513
  
  $ICL_mbc
  [1] 263.3513
  
  $Total_BIC
  [1] -29707.68
  
  $Total_ICL
  [1] -29707.68
  
  4 isolate(s) removed
  $BIC_model
  [1] 7969
  
  $BIC_mbc
  [1] 321.3746
  
  $ICL_mbc
  [1] 321.3746
  
  $Total_BIC
  [1] 8290.375
  
  $Total_ICL
  [1] 8290.375
  
  7 isolate(s) removed
  $BIC_model
  [1] 8438.659
  
  $BIC_mbc
  [1] 358.1017
  
  $ICL_mbc
  [1] 358.1017
  
  $Total_BIC
  [1] 8796.76
  
  $Total_ICL
  [1] 8796.76
  
  1 isolate(s) removed
  $BIC_model
  [1] 17087.57
  
  $BIC_mbc
  [1] 271.5205
  
  $ICL_mbc
  [1] 271.5205
  
  $Total_BIC
  [1] 17359.09
  
  $Total_ICL
  [1] 17359.09
  
  1 isolate(s) removed
  $BIC_model
  [1] 6620.352
  
  $BIC_mbc
  [1] 46.66056
  
  $ICL_mbc
  [1] 46.66056
  
  $Total_BIC
  [1] 6667.012
  
  $Total_ICL
  [1] 6667.012
  
  3 isolate(s) removed
  $BIC_model
  [1] -1739.29
  
  $BIC_mbc
  [1] 377.5446
  
  $ICL_mbc
  [1] 377.5446
  
  $Total_BIC
  [1] -1361.745
  
  $Total_ICL
  [1] -1361.745
  
  No isolates to remove
  $BIC_model
  [1] -7811.868
  
  $BIC_mbc
  [1] 326.2705
  
  $ICL_mbc
  [1] 326.2705
  
  $Total_BIC
  [1] -7485.597
  
  $Total_ICL
  [1] -7485.597
  
  2 isolate(s) removed
  $BIC_model
  [1] 9038.947
  
  $BIC_mbc
  [1] -32.70101
  
  $ICL_mbc
  [1] -32.70101
  
  $Total_BIC
  [1] 9006.246
  
  $Total_ICL
  [1] 9006.246
  
  7 isolate(s) removed
  $BIC_model
  [1] 11307.29
  
  $BIC_mbc
  [1] 17.83606
  
  $ICL_mbc
  [1] 17.83606
  
  $Total_BIC
  [1] 11325.12
  
  $Total_ICL
  [1] 11325.12
  
  No isolates to remove
  $BIC_model
  [1] 23270.2
  
  $BIC_mbc
  [1] 83.43346
  
  $ICL_mbc
  [1] 83.43346
  
  $Total_BIC
  [1] 23353.64
  
  $Total_ICL
  [1] 23353.64
  
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Combinations of K and D considered:
       K D
  [1,] 3 2
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  7 isolate(s) removed
  2 isolate(s) removed
  3 isolate(s) removed
  6 isolate(s) removed
  6 isolate(s) removed
  9 isolate(s) removed
  2 isolate(s) removed
  No isolates to remove
  No isolates to remove
  3 isolate(s) removed
  2 isolate(s) removed
  4 isolate(s) removed
  6 isolate(s) removed
  3 isolate(s) removed
  3 isolate(s) removed
  1 isolate(s) removed
  1 isolate(s) removed
  1 isolate(s) removed
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  No isolates to remove
  No isolates to remove
  No isolates to remove
  7 isolate(s) removed
  2 isolate(s) removed
  4 isolate(s) removed
  6 isolate(s) removed
  3 isolate(s) removed
  6 isolate(s) removed
  5 isolate(s) removed
  1 isolate(s) removed
  5 isolate(s) removed
  8 isolate(s) removed
  3 isolate(s) removed
  4 isolate(s) removed
  2 isolate(s) removed
  3 isolate(s) removed
  1 isolate(s) removed
  No isolates to remove
  1 isolate(s) removed
  1 isolate(s) removed
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Combinations of K and D considered:
       K D
  [1,] 5 3
  No isolates to remove
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Combinations of K and D considered:
       K D
  [1,] 5 3
  Rownames/colnames for A missing or not unique, generating node IDs 1:100
  Combinations of K and D considered:
       K D
  [1,] 3 2
  [2,] 5 3
  Saving _problems/test-specify_priors-147.R
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 27 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-specify_priors.R:39:4'): specify_priors works ────────────────
  Expected `{ ... }` not to throw any errors.
  Actually got a <FutureInterruptError> with message:
    A future ('future_lapply-1') of class SequentialFuture was interrupted at 2025-12-09T13:32:15, while running on 'gannet.stats.ox.ac.uk' (pid 751649)
  
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 27 ]
  Error:
  ! Test failures.
  Execution halted