Running ‘testthat.R’ [51s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(DGEobj.utils)
  > 
  > test_check("DGEobj.utils")
  Loading required package: DGEobj
  Loading required package: statmod
  Loading required package: RNASeqPower
  Loading required package: edgeR
  Loading required package: limma
  Saving _problems/test_runEdgeRNorm-48.R
  Saving _problems/test_runEdgeRNorm-60.R
  Saving _problems/test_runEdgeRNorm-70.R
  Saving _problems/test_runPower-27.R
  Saving _problems/test_runPower-28.R
  Saving _problems/test_runPower-29.R
  Saving _problems/test_runPower-33.R
  Saving _problems/test_runPower-34.R
  Saving _problems/test_runPower-35.R
  Number of significant surrogate variables is:  11 
  Iteration (out of 5 ):1  2  3  4  5  Number of significant surrogate variables is:  10 
  Iteration (out of 5 ):1  2  3  4  5  Number of significant surrogate variables is:  43 
  Iteration (out of 5 ):[ FAIL 9 | WARN 1 | SKIP 1 | PASS 322 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • On CRAN (1): 'test_runVoom.R:5:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test_runEdgeRNorm.R:48:5'): runEdgeRNorm: runEdgeRNorm() ──────────
  Expected `runEdgeRNorm_two_test[[2]]` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runEdgeRNorm.R:60:5'): runEdgeRNorm: runEdgeRNorm() ──────────
  Expected `runEdgeRNorm_two_test[[2]]` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runEdgeRNorm.R:70:5'): runEdgeRNorm: runEdgeRNorm() ──────────
  Expected `runEdgeRNorm_two_test[[2]]` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:27:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$ROC` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:28:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$NvP` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:29:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$PowerData` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:33:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$ROC` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:34:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$NvP` to be an S3 object.
  Actual OO type: none.
  ── Failure ('test_runPower.R:35:5'): runPower.R: runPower() ────────────────────
  Expected `power_plot$PowerData` to be an S3 object.
  Actual OO type: none.
  
  [ FAIL 9 | WARN 1 | SKIP 1 | PASS 322 ]
  Error:
  ! Test failures.
  Execution halted