Running ‘testthat.R’ [21m/24m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ggPMX)
  > library(data.table)
  > setDTthreads(1)
  > test_check("ggPMX")
  
  Attaching package: 'dplyr'
  
  The following objects are masked from 'package:data.table':
  
      between, first, last
  
  The following objects are masked from 'package:stats':
  
      filter, lag
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  Error in loadNamespace(x) : there is no package called 'qs'
  Saving _problems/test-pmx-all-plots-134.R
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  Error in loadNamespace(x) : there is no package called 'qs'
  Error in loadNamespace(x) : there is no package called 'qs'
  Saving _problems/test-pmx_nlmixr-28.R
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  convergence of SAEM parameter estimates  file does not exist.
  [ FAIL 3 | WARN 0 | SKIP 15 | PASS 988 ]
  
  ══ Skipped tests (15) ══════════════════════════════════════════════════════════
  • On CRAN (12): 'test-nlmixr.R:3:5', 'test-nlmixr.R:43:5',
    'test-nlmixr.R:117:5', 'test-nonmem_reader.R:115:13',
    'test-pmx-report.R:68:7', 'test-pmx-report.R:79:7', 'test-pmx-report.R:98:7',
    'test-pmx-report.R:117:7', 'test-pmx-report.R:157:7',
    'test-pmx-report.R:174:7', 'test-utils.R:107:5', 'test-vdiff.R:6:5'
  • empty test (1): 'test-nonmem_reader.R:98:3'
  • file.exists(test_path("censoring1_project.zip")) is not TRUE (1):
    'test-simBlq-npde.R:1:1'
  • skipping ChartsData export warning test (1): 'test-utils.R:89:5'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-pmx-all-plots.R:132:7'): pmx_plot_generic with nlmixr controller: params: ctr, pname   result: identical inherits, names ──
  Error: there is no package called 'qs'
  Backtrace:
      ▆
   1. ├─nlmixr2est::nlmixr(...) at test-pmx-all-plots.R:132:7
   2. └─nlmixr2est:::nlmixr2.function(...)
   3.   └─nlmixr2est:::nlmixr2Est0(.env)
  ── Error ('test-pmx-report.R:205:7'): (code run outside of `test_that()`) ──────
  Error: there is no package called 'qs'
  Backtrace:
      ▆
   1. ├─withr::with_tempdir(...) at test-pmx-report.R:2:3
   2. │ └─withr::with_dir(tmp, code)
   3. │   └─base::force(code)
   4. ├─nlmixr2est::nlmixr(...) at test-pmx-report.R:205:7
   5. └─nlmixr2est:::nlmixr2.function(...)
   6.   └─nlmixr2est:::nlmixr2Est0(.env)
  ── Error ('test-pmx_nlmixr.R:26:3'): (code run outside of `test_that()`) ───────
  Error: there is no package called 'qs'
  Backtrace:
      ▆
   1. ├─nlmixr2est::nlmixr(...) at test-pmx_nlmixr.R:26:3
   2. └─nlmixr2est:::nlmixr2.function(...)
   3.   └─nlmixr2est:::nlmixr2Est0(.env)
  
  [ FAIL 3 | WARN 0 | SKIP 15 | PASS 988 ]
  Error:
  ! Test failures.
  Execution halted