Found the following files/directories:
  ‘cometExactTest_plot.pdf’
Found the following HTML validation problems:
plot.comet.html:64:1 (plot.comet.Rd:23): Warning: missing </ul> before </div>
Maintainer: ‘Antonio Canale <antonio.canale@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Canale",
                      role = c("aut", "cre"),
                      email = "antonio.canale@unipd.it"),
               person(given = "Daniele",
                      family = "Durante",
                      role = "ctb"),
               person(given = "Arianna",
                      family = "Falcioni",
                      role = "aut"),
               person(given = "Luisa",
                      family = "Galtarossa",
                      role = "aut"),
               person(given = "Tommaso",
                      family = "Rigon",
                      role = "ctb"))
as necessary.
checkRd: (-1) BMD.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) add.risk.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) add.risk.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:67-68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘S. Gorsky <sgorsky@umass.edu>’

The Description field contains
  information, see Gorsky, Chan and Ma (2020) <arXiv:2001.06451>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/COMIX.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) count_pairs.Rd:19-20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:21-22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) score_log_nonparam.Rd:36: Lost braces; missing escapes or markup?
    36 | {0, 1}.
       | ^
checkRd: (-1) score_log_semiparam.Rd:40: Lost braces; missing escapes or markup?
    40 | values in {0, 1}.
       |           ^
checkRd: (-1) sort_pairs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Kornelius Rohmeyer <rohmeyer@small-projects.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kornelius",
                      family = "Rohmeyer",
                      role = c("aut", "cre"),
                      email = "rohmeyer@small-projects.de",
                      comment = c(ROR = "R package")),
               person(given = c("see", "COPYRIGHTS", "file", "for", "the", "authors", "of", "the", "java"),
                      family = "libraries",
                      role = "aut"))
as necessary.
Maintainer: ‘Jia-Han Shih <tommy355097@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jia-Han",
                    family = "Shih",
                    role = c("aut", "cre"),
                    email = "tommy355097@gmail.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/communication.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) hmm.Rd:47-55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:56-62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:63-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:71-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:75-78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:79-84: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:85-89: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:95-103: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:104-107: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:108-111: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:112-118: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:119-129: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:130-133: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Ana C. Braga <acb@dps.uminho.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ana", "C.", "Braga", "with", "contributions", "from", "Hugo"),
                      family = "Frade",
                      role = "aut"),
               person(given = "Sara",
                      family = "Carvalho",
                      role = "aut"),
               person(given = c("Andre", "M."),
                      family = "Santiago",
                      role = "aut"),
               person(given = c("Ana", "C."),
                      family = "Braga",
                      role = "cre",
                      email = "acb@dps.uminho.pt"))
as necessary.
Maintainer: ‘Christina Heinze-Deml <heinzedeml@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christina",
                      family = "Heinze-Deml",
                      role = c("aut", "cre"),
                      email = "heinzedeml@stat.math.ethz.ch"),
               person(given = "Nicolai",
                      family = "Meinshausen",
                      role = "aut",
                      email = "meinshausen@stat.math.ethz.ch"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
CopulaSelection.html:55:1 (CopulaSelection.Rd:15): Warning: missing </ul> before </div>
MarginalsSelection.html:94:1 (MarginalsSelection.Rd:40): Warning: missing </ul> before </div>
Sstar.html:67:1 (Sstar.Rd:20): Warning: missing </ul> before </div>
get_prob1.html:84:1 (get_prob1.Rd:34): Warning: missing </ul> before </div>
Found the following HTML validation problems:
compare_df.html:101:1 (compare_df.Rd:45): Warning: missing </ul> before </div>
create_output_table.html:85:1 (create_output_table.Rd:35): Warning: missing </ul> before </div>
create_wide_output.html:50:1 (create_wide_output.Rd:12): Warning: missing </ul> before </div>
view_html.html:46:1 (view_html.Rd:10): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compareMCMCs.R’ ‘metrics-addMetrics.R’
Found the following HTML validation problems:
MCMCresult.html:163:1 (MCMCresult.Rd:108): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:169:1 (MCMCresult.Rd:112): Warning: <h5> anchor "Arguments" already defined
MCMCresult.html:199:1 (MCMCresult.Rd:128): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:205:1 (MCMCresult.Rd:132): Warning: <h5> anchor "Arguments" already defined
MCMCresult.html:230:1 (MCMCresult.Rd:148): Warning: <h5> anchor "Returns" already defined
MCMCresult.html:247:1 (MCMCresult.Rd:157): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:253:1 (MCMCresult.Rd:161): Warning: <h5> anchor "Arguments" already defined
MCMCresult.html:266:1 (MCMCresult.Rd:168): Warning: <h5> anchor "Details" already defined
MCMCresult.html:275:1 (MCMCresult.Rd:174): Warning: <h5> anchor "Returns" already defined
MCMCresult.html:292:1 (MCMCresult.Rd:183): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:298:1 (MCMCresult.Rd:187): Warning: <h5> anchor "Arguments" already defined
MCMCresult.html:314:1 (MCMCresult.Rd:197): Warning: <h5> anchor "Details" already defined
MCMCresult.html:337:1 (MCMCresult.Rd:213): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:343:1 (MCMCresult.Rd:217): Warning: <h5> anchor "Arguments" already defined
MCMCresult.html:372:1 (MCMCresult.Rd:236): Warning: <h5> anchor "Usage" already defined
MCMCresult.html:378:1 (MCMCresult.Rd:240): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘Paul Murrell <p.murrell@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paul",
                    family = "Murrell",
                    role = c("aut", "cre"),
                    email = "p.murrell@auckland.ac.nz")
as necessary.
checkRd: (-1) glass.Rd:10: Lost braces
    10 | \item{item}{factor}{200 levels - which item the measurements came from}
       |                    ^
checkRd: (-1) glass.Rd:11-12: Lost braces
    11 | \item{fragment}{factor}{4 levels - which of the four fragments from each item the observations were made
       |                        ^
checkRd: (-1) glass.Rd:13: Lost braces
    13 | \item{logNaO}{numeric}{log of sodium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:14: Lost braces
    14 | \item{logMgO}{numeric}{log of magnesium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:15: Lost braces
    15 | \item{logAlO}{numeric}{log of aluminium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:16: Lost braces
    16 | \item{logSiO}{numeric}{log of silicon concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:17: Lost braces
    17 | \item{logKO}{numeric}{log of potassium concentration to oxygen concentration}
       |                      ^
checkRd: (-1) glass.Rd:18: Lost braces
    18 | \item{logCaO}{numeric}{log of calcium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:19: Lost braces
    19 | \item{logFeO}{numeric}{log of iron concentration to oxygen concentration}
       |                       ^
Found the following HTML validation problems:
print.compitem.html:51:1 (print.compitem.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Samuel W.K. Wong <samuel.wong@uwaterloo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Samuel", "W.K."),
                      family = "Wong",
                      role = c("aut", "cre"),
                      email = "samuel.wong@uwaterloo.ca"),
               person(given = "Dylan",
                      family = "Shi",
                      role = "aut"),
               person(given = "Megan",
                      family = "Hazlett",
                      role = "aut"),
               person(given = "Jasmine",
                      family = "Cheng",
                      role = "aut"))
as necessary.
checkRd: (-1) atomdeps.Rd:9: Lost braces
     9 |  \item{"tangle"}: {Dihedral angle defined by atoms A-B-C-D as described below. \code{NA}'s represent the free side chain dihedral angles \emph{chi} for that amino acid.}
       |                   ^
checkRd: (-1) atomdeps.Rd:10: Lost braces; missing escapes or markup?
    10 |  \item{"names"}: {The component atoms of the amino acid side chain.  Represents atom D in the dihedral.}
       |                  ^
checkRd: (-1) atomdeps.Rd:11: Lost braces; missing escapes or markup?
    11 |  \item{"matx"}: {The names of atoms A,B,C in the dihedral, with rows corresponding to the atoms in "names".}
       |                 ^
checkRd: (-1) atomdeps.Rd:12: Lost braces; missing escapes or markup?
    12 |  \item{"bangle"}: {Planar bond angle formed between B-C-D}
       |                   ^
checkRd: (-1) atomdeps.Rd:13: Lost braces; missing escapes or markup?
    13 |  \item{"blength"}: {Bond length between C-D}
       |                    ^
Maintainer: ‘Saralees Nadarajah <Saralees.Nadarajah@manchester.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Wiegand",
                      role = "aut"),
               person(given = "Saralees",
                      family = "Nadarajah",
                      role = c("aut", "cre"),
                      email = "saralees.nadarajah@manchester.ac.uk"))
as necessary.
checkRd: (-1) keener.Rd:82: Lost braces; missing escapes or markup?
    82 | a_{ij} = (S_ij + 1) / (S_ij + S_ji + 2). This step should make comparing
       |   ^
Found the following HTML validation problems:
num_wins.html:59:1 (num_wins.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
multi-assign.html:50:1 (multi-assign.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘M. A. J. Zondervan-Zwijnenburg <m.zondervan@vilans.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("M.", "A.", "J."),
                    family = "Zondervan-Zwijnenburg",
                    role = c("aut", "cre"),
                    email = "m.zondervan@vilans.nl")
as necessary.
Maintainer: ‘Albert Dorador <albert.dorador@estudiant.upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Albert",
                      family = "Dorador",
                      role = c("aut", "cre"),
                      email = "albert.dorador@estudiant.upc.edu"),
               person(given = c("Uffe", "Høgsbro"),
                      family = "Thygesen",
                      role = "aut"))
as necessary.
Maintainer: ‘Michał Krassowski <krassowski.michal+r@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
print.summary.complmrob.html:64:1 (print.summary.complmrob.Rd:21): Warning: missing </ul> before </div>
summary-methods.html:68:1 (summary-methods.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Tony Pourmohamad <tpourmohamad@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Andrew Raim <andrew.raim@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Kimberly", "Sellers", "Thomas", "Lotze", "<thomas.lotze@thomaslotze.com>", "Andrew", "Raim"),
                      family = "<andrew.raim@gmail.com>",
                      role = "aut",
                      email = "andrew.raim@gmail.com"),
               person(given = "Andrew",
                      family = "Raim",
                      role = "cre",
                      email = "andrew.raim@gmail.com"))
as necessary.
Found the following HTML validation problems:
mydata.html:58:1 (mydata.Rd:17): Warning: missing </ul> before </div>
Found the following HTML validation problems:
mydata.html:58:1 (mydata.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Zengchao Hao <z.hao4univ@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zengchao",
                    family = "Hao",
                    role = c("aut", "cre"),
                    email = "z.hao4univ@gmail.com")
as necessary.
Maintainer: ‘Bowen Liu <bowen.liu@umkc.edu>’

The Description field contains
  found in Bowen Liu, Malwane M.A. Ananda (2023) <arXiv:2309.16443>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Michel Semenou <michel.semenou@oniris-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michel",
                    family = "Semenou",
                    role = c("aut", "cre"),
                    email = "michel.semenou@oniris-nantes.fr")
as necessary.
Maintainer: ‘AC Del Re <acdelre@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("AC", "Del"),
                    family = "Re",
                    role = c("aut", "cre"),
                    email = "acdelre@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zoltan Botta-Dukat <botta-dukat.zoltan@okologia.mta.hu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zoltan",
                    family = "Botta-Dukat",
                    role = c("aut", "cre"),
                    email = "botta-dukat.zoltan@okologia.mta.hu")
as necessary.
Maintainer: ‘Zhicheng Du <dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Ziqiang",
                      family = "Lin",
                      role = "aut"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Maintainer: ‘Mark Baas <mark.baas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mark",
                    family = "Baas",
                    role = c("aut", "cre"),
                    email = "mark.baas@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘fitmodel.R’
Maintainer: ‘Adrienne Traxler <adrienne.traxler@wright.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) concstats_hhi.Rd:13: Lost braces; missing escapes or markup?
    13 | value is required. Ranges from {0, 1} and often used for comparison over
       |                                ^
Found the following HTML validation problems:
render_template.html:70:1 (render_template.Rd:26): Warning: missing </ul> before </div>
Found the following HTML validation problems:
condformat-shiny.html:77:1 (condformat-shiny.Rd:33): Warning: missing </ul> before </div>
condformat2excel.html:68:1 (condformat2excel.Rd:24): Warning: missing </ul> before </div>
knit_print.condformat_tbl.html:51:1 (knit_print.condformat_tbl.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘David Clement <dyc24@cornell.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Clement",
                    role = c("aut", "cre"),
                    email = "dyc24@cornell.edu")
as necessary.
Maintainer: ‘Christina Heinze-Deml <heinzedeml@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christina",
                      family = "Heinze-Deml",
                      role = c("aut", "cre"),
                      email = "heinzedeml@stat.math.ethz.ch"),
               person(given = "Jonas",
                      family = "Peters",
                      role = "aut",
                      email = "jonas.peters@math.ku.dk"),
               person(given = c("Asbjoern", "Marco", "Sinius"),
                      family = "Munk",
                      role = "aut",
                      email = "fgp998@alumni.ku.dk"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  <arXiv:1202.3775>), Residual Prediction test (based on Shah and
  Buehlmann, <arXiv:1511.03334>), Invariant environment prediction,
  <arXiv:1706.08576>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) KCI.Rd:44: Lost braces
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                ^
checkRd: (-1) KCI.Rd:44: Lost braces
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                      ^
checkRd: (-1) KCI.Rd:44: Lost braces; missing escapes or markup?
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                                    ^
Found the following HTML validation problems:
roundBF.html:55:1 (roundBF.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
CondiS.html:54:1 (CondiS.Rd:14): Warning: missing </ul> before </div>
CondiS_X.html:58:1 (CondiS_X.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Scott Chamberlain <myrmecocystus@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CODE_OF_CONDUCT.md
    From: README.md
Maintainer: ‘Marta Sestelo <sestelo@uvigo.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luis",
                      family = "Meira-Machado",
                      role = "aut"),
               person(given = "Marta",
                      family = "Sestelo",
                      role = c("aut", "cre"),
                      email = "sestelo@uvigo.es"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
'library' or 'require' call not declared from: ‘e1071’
Found the following HTML validation problems:
interpolate.html:67:1 (interpolate.Rd:27): Warning: missing </ul> before </div>
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
Found the following HTML validation problems:
write_html.html:50:1 (write_html.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
label_ontop_boundaries.html:51:1 (label_ontop_boundaries.Rd:12): Warning: missing </ul> before </div>
plot_intervals_norm.html:92:1 (plot_intervals_norm.Rd:38): Warning: missing </ul> before </div>
strwidthl.html:46:1 (strwidthl.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mathias Fuchs<mathias@mathiasfuchs.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mathias",
                    family = "Fuchs",
                    role = c("aut", "cre"),
                    email = "mathias@mathiasfuchs.de")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘confIntVariance-package.Rd’:
    \keyword{variance, confidence interval}
Found the following HTML validation problems:
check_matching_repetitions.html:54:1 (check_matching_repetitions.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Niharika Gauraha <niharika.gauraha@farmbio.uu.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niharika",
                      family = "Gauraha",
                      role = c("aut", "cre"),
                      email = "niharika.gauraha@farmbio.uu.se"),
               person(given = "Ola",
                      family = "Spjuth",
                      role = "aut"))
as necessary.
Maintainer: ‘Paolo Vergottini <paolo.vergottini@gmail.com>’

The Description field contains
  Fontana, and Vantini (2021) <arXiv:2102.06746>, Diquigiovanni, Fontana,
  and Vantini (2021) <arXiv:2106.01792>, Solari, and Djordjilovic (2021)
  <arXiv:2103.00627>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yachong Yang <yachong@wharton.upenn.edu>’

The Description field contains
  <arxiv:2104.13871>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
ginverselm.funs.html:50:1 (ginverselm.funs.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jesse Hemerik <j.b.a.hemerik@lumc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jesse",
                      family = "Hemerik",
                      role = c("aut", "cre"),
                      email = "j.b.a.hemerik@lumc.nl"),
               person(given = "Jelle",
                      family = "Goeman",
                      role = "aut"))
as necessary.
checkRd: (-1) binary_class_cm.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘James Conigrave <james.conigrave@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "James",
                    family = "Conigrave",
                    role = c("aut", "cre"),
                    email = "james.conigrave@gmail.com")
as necessary.
Maintainer: ‘José Manuel Monroy Kuhn <nolozz@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) NetStats.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Sidharth Macherla <msidharthrasik@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
DBI.html:81:1 (DBI.Rd:32): Warning: missing </ul> before </div>
read_pin_conn.html:46:1 (read_pin_conn.Rd:10): Warning: missing </ul> before </div>
write_pin_conn.html:54:1 (write_pin_conn.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ConnectorDatabricksTable.html:151:1 (ConnectorDatabricksTable.Rd:124): Warning: <h5> anchor "Usage" already defined
ConnectorDatabricksTable.html:157:1 (ConnectorDatabricksTable.Rd:128): Warning: <h5> anchor "Arguments" already defined
ConnectorDatabricksVolume.html:159:1 (ConnectorDatabricksVolume.Rd:123): Warning: <h5> anchor "Usage" already defined
ConnectorDatabricksVolume.html:165:1 (ConnectorDatabricksVolume.Rd:127): Warning: <h5> anchor "Arguments" already defined
connector-options-databricks.html:69:1 (connector-options-databricks.Rd:27): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Client.html:168:1 (Client.Rd:91): Warning: missing </ul> before </div>
Client.html:87:1 (Client.Rd:43): Warning: <h5> anchor "Usage" already defined
Client.html:101:1 (Client.Rd:52): Warning: <h5> anchor "Usage" already defined
Client.html:115:1 (Client.Rd:61): Warning: <h5> anchor "Usage" already defined
Client.html:129:1 (Client.Rd:70): Warning: <h5> anchor "Usage" already defined
Client.html:145:1 (Client.Rd:80): Warning: <h5> anchor "Usage" already defined
evaluate_widget_input.html:54:1 (evaluate_widget_input.Rd:14): Warning: missing </ul> before </div>
gen_theme_dependency.html:54:1 (gen_theme_dependency.Rd:14): Warning: missing </ul> before </div>
resolve_theme_dependency.html:48:1 (resolve_theme_dependency.Rd:11): Warning: missing </ul> before </div>
rsc_card-shiny.html:68:1 (rsc_card-shiny.Rd:25): Warning: missing </ul> before </div>
rsc_card.html:49:1 (rsc_card.Rd:13): Warning: missing </ul> before </div>
rsc_filter-shiny.html:68:1 (rsc_filter-shiny.Rd:25): Warning: missing </ul> before </div>
rsc_filter.html:48:1 (rsc_filter.Rd:11): Warning: missing </ul> before </div>
rsc_grid-shiny.html:68:1 (rsc_grid-shiny.Rd:25): Warning: missing </ul> before </div>
rsc_grid.html:48:1 (rsc_grid.Rd:12): Warning: missing </ul> before </div>
rsc_search-shiny.html:68:1 (rsc_search-shiny.Rd:25): Warning: missing </ul> before </div>
rsc_search.html:47:1 (rsc_search.Rd:10): Warning: missing </ul> before </div>
rsc_table.html:48:1 (rsc_table.Rd:12): Warning: missing </ul> before </div>
warning_large_content.html:50:1 (warning_large_content.Rd:12): Warning: missing </ul> before </div>
warning_widget_input.html:54:1 (warning_widget_input.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘David M. Kaplan <dmkaplan2000@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "M."),
                      family = "Kaplan",
                      role = c("cre", "aut"),
                      email = "dmkaplan2000@gmail.com"),
               person(given = "Marco",
                      family = "Andrello",
                      role = "ctb",
                      email = "marco.andrello@gmail.com"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘chile.loco.Rd’:
    http://dx.doi.org/10.1016/j.pocean.2014.03.011
  File ‘damselfish.lods.Rd’:
    http://dx.doi.org/10.1046/j.1471-8286.2003.00439.x
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘conogive.Rd’:
    https://doi.org/10.1007/978-1-4757-2691-6_15
Found the following HTML validation problems:
massage_cuts.html:51:1 (massage_cuts.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Alexis Dinno <alexis.dinno@pdx.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexis",
                    family = "Dinno",
                    role = c("aut", "cre"),
                    email = "alexis.dinno@pdx.edu")
as necessary.
Found the following HTML validation problems:
ReadAllY.html:54:1 (ReadAllY.Rd:14): Warning: missing </ul> before </div>
replaceInDataFrame.html:54:1 (replaceInDataFrame.Rd:14): Warning: missing </ul> before </div>
replaceInVector.html:54:1 (replaceInVector.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
predict.html:59:1 (predict.Rd:19): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘api-get_datalog.R’ ‘api-get_device.R’ ‘api-get_devices.R’
    ‘api-get_element.R’ ‘api-get_elements.R’ ‘api-get_project.R’
    ‘api-get_projects.R’ ‘api-get_users_me.R’ ‘client.R’
Maintainer: ‘Mary C Meyer <meyer@stat.colostate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mary", "C"),
                    family = "Meyer",
                    role = c("aut", "cre"),
                    email = "meyer@stat.colostate.edu")
as necessary.
Maintainer: ‘Josep Puig <puigjos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "Puig"),
                      family = "Sallés",
                      role = "aut"),
               person(given = "Josep",
                      family = "Puig",
                      role = "cre",
                      email = "puigjos@gmail.com"))
as necessary.
Found the following HTML validation problems:
plot.roll.ConsRegArima.html:53:1 (plot.roll.ConsRegArima.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
constructive-global_options.html:80:1 (constructive-global_options.Rd:36): Warning: missing </ul> before </div>
other-opts.html:167:1 (other-opts.Rd:201): Warning: missing </ul> before </div>
print.constructive_code.html:72:1 (print.constructive_code.Rd:27): Warning: missing </ul> before </div>
Maintainer: ‘Angelo Mazza <a.mazza@unict.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Punzo",
                      role = "aut"),
               person(given = "Angelo",
                      family = "Mazza",
                      role = c("aut", "cre"),
                      email = "a.mazza@unict.it"),
               person(given = c("Paul", "D."),
                      family = "McNicholas",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
build_conText.html:69:1 (build_conText.Rd:25): Warning: missing </ul> before </div>
build_dem.html:69:1 (build_dem.Rd:25): Warning: missing </ul> before </div>
build_fem.html:68:1 (build_fem.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Robin", "K.", "S."),
                    family = "Hankin",
                    role = c("aut", "cre"),
                    email = "hankin.robin@gmail.com")
as necessary.
Maintainer: ‘Carl Witthoft <cellocgw@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carl",
                    family = "Witthoft",
                    role = c("aut", "cre"),
                    email = "cellocgw@gmail.com")
as necessary.
Found the following HTML validation problems:
tables.html:50:1 (tables.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-onAttach.html:50:1 (dot-onAttach.Rd:12): Warning: missing </ul> before </div>
print.html:55:1 (print.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Nicholas Hamilton <n.hamilton@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nicholas",
                    family = "Hamilton",
                    role = c("aut", "cre"),
                    email = "n.hamilton@unsw.edu.au")
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) getConvexHull.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getConvexHull.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getConvexHull.Rd:30: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Tony Murphy <tonymurphy55.am@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tony",
                    family = "Murphy",
                    role = c("aut", "cre"),
                    email = "tonymurphy55.am@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cumulative_split_code.Rd’ ‘decompose_contrasts.Rd’
    ‘expand_formulas.R’ ‘factor_coercion_messages.R’
    ‘glimpse_contrasts.R’ ‘make_parameters.R’ ‘orth_polynomial_code.Rd’
    ‘raw_polynomial_code.Rd’ ‘use_contrast.R’ ‘utils_check_labels.R’
    ‘utils_trymatch.R’
Found the following HTML validation problems:
print.contrast.html:62:1 (print.contrast.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

The Description field contains
  when the model is known ('Guo and Small' (2016) <arXiv:1602.01051>) and
  <arXiv:2010.09922>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Ben C. Ubah <ubah.ben22@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Ben", "C."),
                    family = "Ubah",
                    role = c("aut", "cre"),
                    email = "ubah.ben22@gmail.com")
as necessary.
Maintainer: ‘Eric S. Kawaguchi <erickawaguchi@ucla.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Eric", "S."),
                    family = "Kawaguchi",
                    role = c("aut", "cre"),
                    email = "erickawaguchi@ucla.edu")
as necessary.
Found the following HTML validation problems:
axis_marks.html:46:1 (axis_marks.Rd:10): Warning: missing </ul> before </div>
print.convergence.clubs.html:51:1 (print.convergence.clubs.Rd:12): Warning: missing </ul> before </div>
print_table.html:50:1 (print_table.Rd:12): Warning: missing </ul> before </div>
summary.convergence.clubs.html:51:1 (summary.convergence.clubs.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Pierre Lafaye De Micheaux <lafaye@unsw.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
dot-addToCache.html:55:1 (dot-addToCache.Rd:15): Warning: missing </ul> before </div>
dot-checkInCache.html:58:1 (dot-checkInCache.Rd:18): Warning: missing </ul> before </div>
dot-readFromCache.html:51:1 (dot-readFromCache.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Gordon Shotwell <g.e.shotwell@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Found the following HTML validation problems:
generate_files.html:74:1 (generate_files.Rd:28): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-shared-parameters.html:95:1 (dot-shared-parameters.Rd:41): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CoOL.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
random.html:50:1 (random.Rd:12): Warning: missing </ul> before </div>
rcpprelu.html:46:1 (rcpprelu.Rd:10): Warning: missing </ul> before </div>
rcpprelu_neg.html:46:1 (rcpprelu_neg.Rd:10): Warning: missing </ul> before </div>
relu.html:46:1 (relu.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Jochen Staudacher <jochen.staudacher@hs-kempten.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Drew Schmidt <wrathematics@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘John Hughes <drjphughesjr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Emily",
                      family = "Goren",
                      role = "aut",
                      email = "emily.goren@gmail.com"),
               person(given = "John",
                      family = "Hughes",
                      role = c("aut", "cre"),
                      email = "drjphughesjr@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) copCAR.Rd:40: Lost braces
    40 |        item{\code{maxit}}{the maximum number of iterations to be used by \code{\link{optim}} when optimizing the objective function. Defaults to \code{1000}.}
       |            ^
checkRd: (-1) copCAR.Rd:40: Lost braces
    40 |        item{\code{maxit}}{the maximum number of iterations to be used by \code{\link{optim}} when optimizing the objective function. Defaults to \code{1000}.}
       |                          ^
Maintainer: ‘Fuyuan David Li <LFY@gwmail.gwu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Fuyuan", "David"),
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "lfy@gwmail.gwu.edu")
as necessary.
checkRd: (-1) condQestCopC.Rd:45: Lost braces; missing escapes or markup?
    45 | obtain the conditional qth quantile of Y_{n+1} given {Y1,...,Yn}.
       |                                          ^
checkRd: (-1) condQestCopC.Rd:45: Lost braces; missing escapes or markup?
    45 | obtain the conditional qth quantile of Y_{n+1} given {Y1,...,Yn}.
       |                                                      ^
checkRd: (-1) condQestCopC.Rd:40: Lost braces; missing escapes or markup?
    40 | \code{condQestCopC} returns the conditional tao-th quantile of Y_{n+1} given {Y1,...,Yn}
       |                                                                  ^
checkRd: (-1) condQestCopC.Rd:40: Lost braces; missing escapes or markup?
    40 | \code{condQestCopC} returns the conditional tao-th quantile of Y_{n+1} given {Y1,...,Yn}
       |                                                                              ^
Maintainer: ‘MA Jian <majian03@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘construct_empirical_copula.Rd’:
    \keyword{empirical copula; rank}
  File ‘entknn.Rd’:
    \keyword{entropy; kNN}
checkRd: (-1) ComputeCope.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:54-56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:57-61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DrawContour.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Draws the contour {f=c}.}
       |                          ^
checkRd: (-1) DrawContour.Rd:20: Lost braces; missing escapes or markup?
    20 | Draws the contour {f=c}.
       |                   ^
checkRd: (-1) cope.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:35: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
DrawContour.html:59:1 (DrawContour.Rd:17): Warning: missing </ul> before </div>
ImageMap.html:73:1 (ImageMap.Rd:25): Warning: missing </ul> before </div>
PlotCope.html:68:1 (PlotCope.Rd:24): Warning: missing </ul> before </div>
Found the following significant warnings:
  seq_measures.cpp:5:54: warning: ‘static out_eT arma::conv_to<out_eT>::from(const arma::Base<eT2, expr>&, const typename arma::arma_not_cx<in_eT>::result*) [with in_eT = unsigned int; T1 = arma::mtOp<unsigned int, arma::mtOp<unsigned int, arma::Col<unsigned int>, arma::op_rel_eq>, arma::op_find_simple>; out_eT = unsigned int; typename arma::arma_not_cx<in_eT>::result = unsigned int]’ is deprecated: replace conv_to<...>::from(X) with as_scalar(X) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/copre.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Maintainer: ‘Jiajing Zheng <carolinez6850@gmail.com>’

The Description field contains
  Inference with Unobserved Confounding <arXiv:2102.09412>, with Gaussian
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bcalibrate.Rd: kEstimate, pca
  cal_rv.Rd: kEstimate, pca
  gcalibrate.Rd: kEstimate, pca
  plot_estimates.Rd: theme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
mkBmat.html:46:1 (mkBmat.Rd:10): Warning: missing </ul> before </div>
secularEq.html:50:1 (secularEq.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Simon Boge Brant <simbrant91@gmail.com>’

The Description field contains
  via gradient boosting [Brant, Hobæk Haff (2022); <arXiv:2208.04669>].
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
AIC.CopulaCenR.html:55:1 (AIC.CopulaCenR.Rd:14): Warning: missing </ul> before </div>
BIC.CopulaCenR.html:51:1 (BIC.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
coef.CopulaCenR.html:51:1 (coef.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
logLik.CopulaCenR.html:51:1 (logLik.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
print.CopulaCenR.html:51:1 (print.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
print.summary.CopulaCenR.html:51:1 (print.summary.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
summary.CopulaCenR.html:51:1 (summary.CopulaCenR.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Bouchra R. Nasri <bouchra.nasri@umontreal.ca>’

The Description field contains
  <arXiv:2301.13408>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Takeshi Emura <takeshiemura@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Takeshi",
                      family = "Emura",
                      role = c("aut", "cre"),
                      email = "takeshiemura@gmail.com"),
               person(given = "Xinwei",
                      family = "Huang",
                      role = "aut"),
               person(given = "Ting-Hsuan",
                      family = "Long",
                      role = "aut"),
               person(given = "Li-Hsien",
                      family = "Sun",
                      role = "aut"))
as necessary.
Maintainer: ‘Xin-Wei Huang <xinweihuang@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xin-Wei",
                      family = "Huang",
                      role = c("aut", "cre"),
                      email = "xinweihuang@hotmail.com"),
               person(given = "Takeshi",
                      family = "Emura",
                      role = "aut"))
as necessary.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:54:1 (inst/NEWS.Rd:23): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:86:1 (inst/NEWS.Rd:40): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:97:1 (inst/NEWS.Rd:45): Warning: <h4> anchor "Misc" already defined
NEWS.html:116:1 (inst/NEWS.Rd:56): Warning: <h4> anchor "Misc" already defined
NEWS.html:162:1 (inst/NEWS.Rd:78): Warning: <h4> anchor "Miscellaneous" already defined
NEWS.html:181:1 (inst/NEWS.Rd:88): Warning: <h4> anchor "New-Features" already defined
NEWS.html:224:1 (inst/NEWS.Rd:118): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:244:1 (inst/NEWS.Rd:130): Warning: <h4> anchor "New-Features" already defined
NEWS.html:282:1 (inst/NEWS.Rd:158): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:313:1 (inst/NEWS.Rd:180): Warning: <h4> anchor "New-Features" already defined
NEWS.html:338:1 (inst/NEWS.Rd:197): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:356:1 (inst/NEWS.Rd:207): Warning: <h4> anchor "New-Features" already defined
NEWS.html:372:1 (inst/NEWS.Rd:216): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:396:1 (inst/NEWS.Rd:231): Warning: <h4> anchor "New-Features" already defined
NEWS.html:455:1 (inst/NEWS.Rd:273): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:485:1 (inst/NEWS.Rd:288): Warning: <h4> anchor "New-Features" already defined
NEWS.html:501:1 (inst/NEWS.Rd:297): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:517:1 (inst/NEWS.Rd:306): Warning: <h4> anchor "New-Features" already defined
NEWS.html:551:1 (inst/NEWS.Rd:329): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:588:1 (inst/NEWS.Rd:353): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:636:1 (inst/NEWS.Rd:381): Warning: <h4> anchor "New-Features" already defined
Maintainer: ‘Lei Yang <leiyangslu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lei",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "leiyangslu@gmail.com")
as necessary.
Maintainer: ‘Shuang Song <song-s19@mails.tsinghua.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wei",
                      family = "Jiang",
                      role = "aut"),
               person(given = "Shuang",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "song-s19@mails.tsinghua.edu.cn"),
               person(given = "Lin",
                      family = "Hou",
                      role = "aut"),
               person(given = "Hongyu",
                      family = "Zhao",
                      role = "aut"))
as necessary.
Maintainer: ‘Andrei Boutyline <aboutyl@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrei",
                    family = "Boutyline",
                    role = c("aut", "cre"),
                    email = "aboutyl@umich.edu")
as necessary.
Found the following HTML validation problems:
plot.cordillera.html:79:1 (plot.cordillera.Rd:30): Warning: missing </ul> before </div>
print.cordillera.html:51:1 (print.cordillera.Rd:12): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CoreCollection.Rd: R6Class
  dot-CoreCollectionClass.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
dot-CoreCollectionClass.html:209:1 (dot-CoreCollectionClass.Rd:116): Warning: missing </ul> before </div>
dot-CoreCollectionClass.html:92:1 (dot-CoreCollectionClass.Rd:42): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:106:1 (dot-CoreCollectionClass.Rd:51): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:128:1 (dot-CoreCollectionClass.Rd:68): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:142:1 (dot-CoreCollectionClass.Rd:77): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:156:1 (dot-CoreCollectionClass.Rd:86): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:170:1 (dot-CoreCollectionClass.Rd:95): Warning: <h5> anchor "Usage" already defined
dot-CoreCollectionClass.html:186:1 (dot-CoreCollectionClass.Rd:105): Warning: <h5> anchor "Usage" already defined
checkRd: (-1) getSurface.Rd:22: Lost braces
    22 | value \code{getSurface} shortens the output of \code{conv} to remove artificial surface layers. The output is thus a subset of the input, and identical in structure to the /code{conv} output.
       |                                                                                                                                                                                  ^
Maintainer: ‘Taylor Arnold <tarnold2@richmond.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Taylor",
                      family = "Arnold",
                      role = c("aut", "cre"),
                      email = "tarnold2@richmond.edu"),
               person(given = "Lauren",
                      family = "Tilton",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
annotateFile.html:69:1 (annotateFile.Rd:24): Warning: missing </ul> before </div>
loadXMLAnnotation.html:53:1 (loadXMLAnnotation.Rd:14): Warning: missing </ul> before </div>
parseAnnoXML.html:47:1 (parseAnnoXML.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Guoli Sun <guolisun87@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alex",
                      family = "Krasnitz",
                      role = "aut"),
               person(given = "Guoli",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "guolisun87@gmail.com"))
as necessary.
Maintainer: ‘Santhosh Sasanapuri <santhosh458@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Navin",
                      family = "Loganathan",
                      role = "aut"),
               person(given = "Mohan",
                      family = "Manivannan",
                      role = "aut"),
               person(given = "Santhosh",
                      family = "Sasanapuri",
                      role = c("aut", "cre"),
                      email = "santhosh458@gmail.com"),
               person(given = "LatentView",
                      family = "Analytics",
                      role = "ctb"))
as necessary.
Maintainer: ‘John Ferguson <john.ferguson@nuigalway.ie>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘linkd.Rd’:
    \keyword{Feligi/Sunter,}
    \keyword{algorithm,}
    \keyword{class,}
    \keyword{linkage,}
Maintainer: ‘Niklas Pfister <np@math.ku.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niklas",
                      family = "Pfister",
                      role = c("aut", "cre"),
                      email = "np@math.ku.dk"),
               person(given = "Sebastian",
                      family = "Weichwald",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘refresh_coronvirus.R’
Found the following HTML validation problems:
async_ops.html:66:1 (async_ops.Rd:21): Warning: missing </ul> before </div>
coro_debug.html:59:1 (coro_debug.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Juliane",
                      family = "Schafer",
                      role = "aut"),
               person(given = "Rainer",
                      family = "Opgen-Rhein",
                      role = "aut"),
               person(given = "Verena",
                      family = "Zuber",
                      role = "aut"),
               person(given = "Miika",
                      family = "Ahdesmaki",
                      role = "aut"),
               person(given = c("A.", "Pedro", "Duarte"),
                      family = "Silva",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Found the following HTML validation problems:
add_multitoken_label.html:68:1 (add_multitoken_label.Rd:24): Warning: missing </ul> before </div>
as.tcorpus.html:50:1 (as.tcorpus.Rd:12): Warning: missing </ul> before </div>
calc_chi2.html:70:1 (calc_chi2.Rd:22): Warning: missing </ul> before </div>
tCorpus-cash-search_recode.html:59:1 (tCorpus-cash-search_recode.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Prabina Kumar Meher <meherprabin@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Prabina", "Kumar", "Meher", "&", "A.", "R."),
                      family = "Rao",
                      role = "aut"),
               person(given = c("Prabina", "Kumar"),
                      family = "Meher",
                      role = "cre",
                      email = "meherprabin@yahoo.com"))
as necessary.
Maintainer: ‘Weiliang Qiu <stwxq@channing.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bernard",
                      family = "Rosner",
                      role = "aut"),
               person(given = "Shelley",
                      family = "Tworoger",
                      role = "aut"),
               person(given = "Weiliang",
                      family = "Qiu",
                      role = c("aut", "cre"),
                      email = "stwxq@channing.harvard.edu"))
as necessary.
Maintainer: ‘Abbas Rahal <Abbas.Rahal13@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Abbas",
                      family = "Rahal",
                      role = c("aut", "cre"),
                      email = "abbas.rahal13@gmail.com"),
               person(given = "Anna",
                      family = "Akpawu",
                      role = "aut"),
               person(given = "Justin",
                      family = "Chitpin",
                      role = "aut"),
               person(given = c("David", "R."),
                      family = "Bickel",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
correlation-deprecated.html:46:1 (correlation-deprecated.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Gary Witt <gary.witt@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chris",
                      family = "Rohlfs",
                      role = "aut"),
               person(given = "Gary",
                      family = "Witt",
                      role = c("aut", "cre"),
                      email = "gary.witt@temple.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  polycorr.Rd: polychor
  tetracorr.Rd: polychor
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Wim Van der Elst <Wim.vanderelst@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wim",
                      family = "Van der Elst",
                      role = c("aut", "cre"),
                      email = "wim.vanderelst@gmail.com"),
               person(given = "Geert",
                      family = "Molenberghs",
                      role = "aut"),
               person(given = "Dieter",
                      family = "Hilgers",
                      role = "aut"),
               person(given = c("&", "Nicole"),
                      family = "Heussen",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘corrRect.hclust.Rd’
Maintainer: ‘Michael G. Campana <campanam@si.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "G."),
                    family = "Campana",
                    role = c("aut", "cre"),
                    email = "campanam@si.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.

The BugReports field in DESCRIPTION has
  https://github.com/campanam/rCorrSieve
which should likely be
  https://github.com/campanam/rCorrSieve/issues
instead.
Maintainer: ‘Ran Gao <rgao8@uic.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rawan",
                      family = "Allozi",
                      role = "aut"),
               person(given = "Hakan",
                      family = "Demirtas",
                      role = "aut"),
               person(given = "Ran",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "rgao8@uic.edu"))
as necessary.
Maintainer: ‘Alan Inglis <alan.n.inglis@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alan",
                    family = "Inglis",
                    role = c("aut", "cre"),
                    email = "alan.n.inglis@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘corrBarplot.R’ ‘corrNetwork.R’
Maintainer: ‘Fran Urbano <viraltux@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Fran",
                    family = "Urbano",
                    role = c("aut", "cre"),
                    email = "viraltux@gmail.com")
as necessary.
Maintainer: ‘Danyang Yu <dyu33@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Danyang",
                      family = "Yu",
                      role = c("aut", "cre"),
                      email = "dyu33@jhu.edu"),
               person(given = "Weiliang",
                      family = "Qiu",
                      role = "aut"),
               person(given = "Zeyu",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Kimberly",
                      family = "Glass",
                      role = "aut"),
               person(given = "Jessica",
                      family = "Su",
                      role = "aut"),
               person(given = c("Dawn", "L."),
                      family = "DeMeo",
                      role = "aut"),
               person(given = "Kelan",
                      family = "Tantisira",
                      role = "aut"),
               person(given = c("Scott", "T."),
                      family = "Weiss",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
adjust_pmat.html:50:1 (adjust_pmat.Rd:12): Warning: missing </ul> before </div>
apa_matrix.html:66:1 (apa_matrix.Rd:20): Warning: missing </ul> before </div>
apa_table.corx.html:50:1 (apa_table.corx.Rd:12): Warning: missing </ul> before </div>
check_classes.html:58:1 (check_classes.Rd:16): Warning: missing </ul> before </div>
cormat_list.html:66:1 (cormat_list.Rd:20): Warning: missing </ul> before </div>
digits.html:50:1 (digits.Rd:12): Warning: missing </ul> before </div>
partial_n_matrix.html:58:1 (partial_n_matrix.Rd:16): Warning: missing </ul> before </div>
plot.corx.html:51:1 (plot.corx.Rd:12): Warning: missing </ul> before </div>
print.corx.html:51:1 (print.corx.Rd:12): Warning: missing </ul> before </div>
rename_if_needed.html:50:1 (rename_if_needed.Rd:12): Warning: missing </ul> before </div>
star_matrix.html:50:1 (star_matrix.Rd:12): Warning: missing </ul> before </div>
to_clipboard.html:50:1 (to_clipboard.Rd:12): Warning: missing </ul> before </div>
to_table.html:50:1 (to_table.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Augustin Mutak <mutak94@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Augustin",
                    family = "Mutak",
                    role = c("aut", "cre"),
                    email = "mutak94@gmail.com")
as necessary.
Maintainer: ‘Michael Sachs <sachsmc@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Sachs",
                    role = c("aut", "cre"),
                    email = "sachsmc@gmail.com")
as necessary.
Found the following HTML validation problems:
get_varnames.html:46:1 (get_varnames.Rd:10): Warning: missing </ul> before </div>
print.cosinor.lm.html:51:1 (print.cosinor.lm.Rd:12): Warning: missing </ul> before </div>
print.test.html:47:1 (print.test.Rd:10): Warning: missing </ul> before </div>
print.test_cosinor.html:51:1 (print.test_cosinor.Rd:12): Warning: missing </ul> before </div>
simulate_cosinor.html:61:1 (simulate_cosinor.Rd:16): Warning: missing </ul> before </div>
update_covnames.html:46:1 (update_covnames.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Andrew Harris <harris@astro.umd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "harris@astro.umd.edu")
as necessary.
checkRd: (-1) cosmoFns-package.Rd:34: Escaped LaTeX specials: \&
Maintainer: ‘Yanlin Tang <yanlintang2018@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yanlin",
                      family = "Tang",
                      role = c("aut", "cre"),
                      email = "yanlintang2018@163.com"),
               person(given = c("Huixia", "Judy"),
                      family = "Wang",
                      role = "aut"))
as necessary.
Maintainer: ‘David Cortes <david.cortes.rivera@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Cortes",
                    role = c("aut", "cre"),
                    email = "david.cortes.rivera@gmail.com")
as necessary.
Found the following HTML validation problems:
print.costprop.html:52:1 (print.costprop.Rd:12): Warning: missing </ul> before </div>
print.rovr.html:52:1 (print.rovr.Rd:12): Warning: missing </ul> before </div>
print.wap.html:52:1 (print.wap.Rd:12): Warning: missing </ul> before </div>
print.wovr.html:52:1 (print.wovr.Rd:12): Warning: missing </ul> before </div>
summary.costprop.html:53:1 (summary.costprop.Rd:12): Warning: missing </ul> before </div>
summary.rovr.html:52:1 (summary.rovr.Rd:12): Warning: missing </ul> before </div>
summary.wap.html:52:1 (summary.wap.Rd:12): Warning: missing </ul> before </div>
summary.wovr.html:52:1 (summary.wovr.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ctmaPRaw.html:83:1 (ctmaPRaw.Rd:33): Warning: missing </ul> before </div>
ctmaRedHet.html:78:1 (ctmaRedHet.Rd:30): Warning: missing </ul> before </div>
ctmaScaleInits.html:64:1 (ctmaScaleInits.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘A. Christian Silva <a.christian.silva@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("A.", "Christian"),
                    family = "Silva",
                    role = c("aut", "cre"),
                    email = "a.christian.silva@gmail.com")
as necessary.
Maintainer: ‘Ivan Fernandez-Val <ivanf@bu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mingli",
                      family = "Chen",
                      role = "aut"),
               person(given = "Victor",
                      family = "Chernozhukov",
                      role = "aut"),
               person(given = "Ivan",
                      family = "Fernandez-Val",
                      role = c("aut", "cre"),
                      email = "ivanf@bu.edu"),
               person(given = "Blaise",
                      family = "Melly",
                      role = "aut"))
as necessary.
Maintainer: ‘Kellie Archer <archer.43@osu.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Timo Adam <timo.adam@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Timo",
                    family = "Adam",
                    role = c("aut", "cre"),
                    email = "timo.adam@uni-bielefeld.de")
as necessary.

The Description field contains
  Hidden Markov Models for Time Series of Counts. <arXiv:1901.03275>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘psRes.Rd’:
    https://doi.org/10.1201/b20790
  File ‘stateDec.Rd’:
    https://doi.org/10.1201/b20790
Found the following HTML validation problems:
dWeibullgammaCount_mat.html:54:1 (dWeibullgammaCount_mat.Rd:18): Warning: missing </ul> before </div>
dWeibullgammaCount_mat_Covariates.html:75:1 (dWeibullgammaCount_mat_Covariates.Rd:30): Warning: missing </ul> before </div>
residuals_plot.html:54:1 (residuals_plot.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘David M. Smith <dmccsmith@verizon.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "M"),
                      family = "Smith",
                      role = "aut"),
               person(given = c("Malcolm", "J"),
                      family = "Faddy",
                      role = "aut"),
               person(given = c("David", "M."),
                      family = "Smith",
                      role = "cre",
                      email = "dmccsmith@verizon.net"))
as necessary.
Maintainer: ‘Anna Neufeld <aneufeld@fredhutch.org>’

The Description field contains
  <arXiv:2307.12985>. Intended for turning a matrix of single-cell RNA
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Brian King <brianking387@gmail.com>’

The Description field contains
  King and Kowal (2022) <arXiv:2110.14790>, and Kowal and Wu (2023)
  <arXiv:2110.12316>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Tanujit Chakraborty <tanujitisi@gmail.com>’

The Description field contains
  is based on the algorithms by Liu et al. (2023) <arXiv:2311.14359>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
corMatrix.covBM.html:56:1 (corMatrix.covBM.Rd:15): Warning: missing </ul> before </div>
corMatrix.covFracBM.html:56:1 (corMatrix.covFracBM.Rd:15): Warning: missing </ul> before </div>
corMatrix.covIOU.html:56:1 (corMatrix.covIOU.Rd:15): Warning: missing </ul> before </div>
print.summary.corStructBM.html:52:1 (print.summary.corStructBM.Rd:13): Warning: missing </ul> before </div>
summary.covBM.html:57:1 (summary.covBM.Rd:16): Warning: missing </ul> before </div>
summary.covFracBM.html:57:1 (summary.covFracBM.Rd:16): Warning: missing </ul> before </div>
summary.covIOU.html:57:1 (summary.covIOU.Rd:16): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/covdepGE.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
get_sample_data.html:46:1 (get_sample_data.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Michael Kirchner <michael@kirchner.io>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Kirchner",
                    role = c("aut", "cre"),
                    email = "michael@kirchner.io")
as necessary.
Found the following files/directories:
  ‘covfefe_inauguration.txt’
Maintainer: ‘Marcelo Ponce <m.ponce@utoronto.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Marcelo",
                      family = "Ponce",
                      role = c("aut", "cre"),
                      email = "m.ponce@utoronto.ca"),
               person(given = "Amit",
                      family = "Sandhel",
                      role = "ctb"))
as necessary.
Maintainer: ‘Max Salvatore <mmsalva@umich.edu>’

Found the following (possibly) invalid file URI:
  URI: twitter.com/MaxSalTweets
    From: README.md
Found the following HTML validation problems:
covid19sf_refresh.html:47:1 (covid19sf_refresh.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Peter Hoff <peter.hoff@duke.edu>’

The Description field contains
  McCormack and Zhang (2022) <arXiv:2207.12484> "Core Shrinkage
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Naisyin",
                      family = "Wang",
                      role = "aut",
                      email = "nwangaa@umich.edu"),
               person(given = c("Adrian", "Raftery", "with", "contributions", "from", "Chris", "Fraley"),
                      family = "<fraley@uw.edu>",
                      role = "aut",
                      email = "fraley@uw.edu"),
               person(given = "Hana",
                      family = "Sevcikova",
                      role = "cre",
                      email = "hanas@uw.edu"))
as necessary.
File ‘covr/libs/covr.so’:
  Found non-API calls to R: ‘BODY’, ‘CLOENV’, ‘FORMALS’, ‘SET_BODY’,
    ‘SET_CLOENV’, ‘SET_FORMALS’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
as_coverage.html:52:1 (as_coverage.Rd:14): Warning: missing </ul> before </div>
as_coverage_with_tests.html:50:1 (as_coverage_with_tests.Rd:12): Warning: missing </ul> before </div>
azure.html:65:1 (azure.Rd:23): Warning: missing </ul> before </div>
count.html:46:1 (count.Rd:10): Warning: missing </ul> before </div>
count_test.html:46:1 (count_test.Rd:10): Warning: missing </ul> before </div>
coveralls.html:74:1 (coveralls.Rd:30): Warning: missing </ul> before </div>
display_name.html:46:1 (display_name.Rd:10): Warning: missing </ul> before </div>
environment_coverage.html:66:1 (environment_coverage.Rd:24): Warning: missing </ul> before </div>
file_report.html:64:1 (file_report.Rd:22): Warning: missing </ul> before </div>
gitlab.html:63:1 (gitlab.Rd:18): Warning: missing </ul> before </div>
key.html:46:1 (key.Rd:10): Warning: missing </ul> before </div>
new_counter.html:50:1 (new_counter.Rd:12): Warning: missing </ul> before </div>
value.html:50:1 (value.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Shahin Tavakoli <s.tavakoli@warwick.ac.uk>’

The Description field contains
  <https://projecteuclid.org/euclid.aos/1498636862> <arXiv:1505.02023>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Ben Barnard <ben_barnard@outlook.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘covTestR-package.Rd’:
    http://doi.org/10.1016/j.csda.2007.03.004
    http://doi.org/10.1016/j.jmva.2010.07.004
  File ‘homogeneityStatistics.Rd’:
    http://doi.org/10.1080/15598608.2017.1308895
    http://doi.org/10.3923/jas.2013.270.277
    http://doi.org/10.1016/j.jspi.2015.10.007
    http://doi.org/10.1016/S0378-3758(00)00209-3
    http://doi.org/10.1016/j.csda.2007.03.004
    http://doi.org/10.1016/j.jmva.2014.06.003
    http://doi.org/10.1016/j.jmva.2009.12.010
  File ‘structureStatistics.Rd’:
    http://doi.org/10.1080/00949655.2014.948441
    http://doi.org/10.1198/jasa.2010.tm09560
    http://doi.org/10.1016/j.jspi.2011.07.019
    http://doi.org/10.1214/aos/1031689018
    http://doi.org/10.14490/jjss.35.251
    http://doi.org/10.1016/j.jmva.2011.03.003
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/covTestR.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
draw_plot_label.html:96:1 (draw_plot_label.Rd:40): Warning: missing </ul> before </div>
ggsave2.html:103:1 (ggsave2.Rd:45): Warning: missing </ul> before </div>
gtable_remove_grobs.html:55:1 (gtable_remove_grobs.Rd:15): Warning: missing </ul> before </div>
gtable_squash_cols.html:50:1 (gtable_squash_cols.Rd:12): Warning: missing </ul> before </div>
gtable_squash_rows.html:50:1 (gtable_squash_rows.Rd:12): Warning: missing </ul> before </div>
panel_border.html:61:1 (panel_border.Rd:17): Warning: missing </ul> before </div>
png_null_device.html:57:1 (png_null_device.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
say.html:126:1 (say.Rd:83): Warning: <h3> anchor "what" already defined
say.html:150:1 (say.Rd:97): Warning: <h3> anchor "by" already defined
say_think.html:52:1 (say_think.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
load_knockoff_gds.html:46:1 (load_knockoff_gds.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dnorkernel.html:50:1 (dnorkernel.Rd:12): Warning: missing </ul> before </div>
integ.html:58:1 (integ.Rd:16): Warning: missing </ul> before </div>
loadingplot.fromVector.Coxmos.html:73:1 (loadingplot.fromVector.Coxmos.Rd:27): Warning: missing </ul> before </div>
muro.html:46:1 (muro.Rd:10): Warning: missing </ul> before </div>
norm01.html:47:1 (norm01.Rd:11): Warning: missing </ul> before </div>
wIQR.html:50:1 (wIQR.Rd:12): Warning: missing </ul> before </div>
wquantile.html:54:1 (wquantile.Rd:14): Warning: missing </ul> before </div>
wvar.html:54:1 (wvar.Rd:14): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘coxphf-tidiers.R’
Maintainer: ‘Jing Peng <pengjing@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jing",
                    family = "Peng",
                    role = c("aut", "cre"),
                    email = "pengjing@live.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CoxPlus.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Hyeri You <h2you@health.ucsd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hyeri",
                      family = "You",
                      role = c("aut", "cre"),
                      email = "h2you@health.ucsd.edu"),
               person(given = "Ronghui",
                      family = "Xu",
                      role = "aut"))
as necessary.
Maintainer: ‘Bella Vakulenko-Lagun <bella.vakulenko-lagun@mail.huji.ac.il>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bella",
                      family = "Vakulenko-Lagun",
                      role = c("aut", "cre"),
                      email = "bella.vakulenko-lagun@mail.huji.ac.il"),
               person(given = "Micha",
                      family = "Mandel",
                      role = "aut"),
               person(given = c("Rebecca", "A."),
                      family = "Betensky",
                      role = "aut"))
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/coxrt.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) coxph.RT.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) coxph.RT.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) coxph.RT.Rd:59-71: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Quentin Giai Gianetto <quentin2g@yahoo.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Quentin", "Giai"),
                      family = "Gianetto",
                      role = c("aut", "cre"),
                      email = "quentin2g@yahoo.fr"),
               person(given = "Florence",
                      family = "Combes",
                      role = "aut"),
               person(given = "Claire",
                      family = "Ramus",
                      role = "aut"),
               person(given = "Christophe",
                      family = "Bruley",
                      role = "aut"),
               person(given = "Yohann",
                      family = "Couté",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Burger",
                      role = "aut"))
as necessary.
Maintainer: ‘Alessandro Bellino <alessandro_bellino@gmx.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Arunabha Majumdar <statgen.arunabha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arunabha",
                      family = "Majumdar",
                      role = c("aut", "cre"),
                      email = "statgen.arunabha@gmail.com"),
               person(given = "Tanushree",
                      family = "Haldar",
                      role = "aut",
                      email = "tanushree.haldar@gmail.com"),
               person(given = "John",
                      family = "Witte",
                      role = "ctb"))
as necessary.
Maintainer: ‘Yongwen Zhuang <zyongwen@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yongwen",
                    family = "Zhuang",
                    role = c("aut", "cre"),
                    email = "zyongwen@umich.edu")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/cPCG.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘R Barfield <barfieldrichard8@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Barfield",
                      role = "aut"),
               person(family = "R.",
                      role = "aut"),
               person(family = "Conneely",
                      role = "aut"),
               person(family = "K.",
                      role = "aut"),
               person(family = "Kilaru,V",
                      role = "aut"),
               person(given = "R",
                      family = "Barfield",
                      role = "cre",
                      email = "barfieldrichard8@gmail.com"))
as necessary.
Maintainer: ‘Jun Chen <chen.jun2@mayo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jun",
                    family = "Chen",
                    role = c("aut", "cre"),
                    email = "Chen.Jun2@mayo.edu")
as necessary.
Maintainer: ‘Jeremie Riou <jeremie.riou@univ-angers.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jeremie",
                      family = "Riou",
                      role = c("aut", "cre"),
                      email = "jeremie.riou@univ-angers.fr"),
               person(given = "Benoit",
                      family = "Liquet",
                      role = "aut"))
as necessary.
Maintainer: ‘Gordon J. Ross <gordon@gordonjross.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Gordon", "J."),
                    family = "Ross",
                    role = c("aut", "cre"),
                    email = "gordon@gordonjross.co.uk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
File ‘cpp11qpdf/libs/cpp11qpdf.so’:
  Found ‘_ZSt4cerr’, possibly from ‘std::cerr’ (C++)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘__printf_chk’, possibly from ‘printf’ (C)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘putchar’, possibly from ‘putchar’ (C)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘srandom’, possibly from ‘srandom’ (C)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘stdout’, possibly from ‘stdout’ (C)
    Object: ‘libqpdf/libstatqpdf.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Maintainer: ‘Luiz O. Gavião <luiz.gaviao67@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luiz", "O."),
                      family = "Gavião",
                      role = c("aut", "cre"),
                      email = "luiz.gaviao67@gmail.com"),
               person(given = c("Annibal", "P."),
                      family = "Sant'Anna",
                      role = "aut"),
               person(given = c("Gilson", "B.A."),
                      family = "Lima",
                      role = "aut"),
               person(given = c("Pauli", "A.A."),
                      family = "Garcia.",
                      role = "aut"))
as necessary.
Maintainer: ‘Vincent Larmet <larmet.vincent@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vincent",
                    family = "Larmet",
                    role = c("aut", "cre"),
                    email = "larmet.vincent@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
run_model_cpp.html:48:1 (run_model_cpp.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Andreas Kuehnapfel <andreas.kuehnapfel@imise.uni-leipzig.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Kuehnapfel",
                    role = c("aut", "cre"),
                    email = "andreas.kuehnapfel@imise.uni-leipzig.de")
as necessary.
Maintainer: ‘Ning Yilin <ningyilinnyl@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ning",
                      family = "Yilin",
                      role = c("aut", "cre"),
                      email = "ningyilinnyl@gmail.com"),
               person(given = c("Tan", "Chuen"),
                      family = "Seng",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
geom_mean.html:46:1 (geom_mean.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cpr-defunct.html:60:1 (cpr-defunct.Rd:29): Warning: missing </ul> before </div>
Maintainer: ‘Jacob Anhøj <jacob@anhoej.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jacob",
                      family = "Anhoej",
                      role = "aut"),
               person(given = "Jacob",
                      family = "Anhøj",
                      role = "cre",
                      email = "jacob@anhoej.net"))
as necessary.
Maintainer: ‘Taylor Brown <trb5me@virginia.edu>’

The Description field contains
  Doucet and Pitt (2017) <arXiv:1511.04992>. If the 'rho=' argument of
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
plot.cpmResults.html:51:1 (plot.cpmResults.Rd:12): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/cpss.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
SC.html:58:1 (SC.Rd:21): Warning: missing </ul> before </div>
SC_vals.html:58:1 (SC_vals.Rd:21): Warning: missing </ul> before </div>
S_vals.html:58:1 (S_vals.Rd:21): Warning: missing </ul> before </div>
algo.html:58:1 (algo.Rd:21): Warning: missing </ul> before </div>
algo_param_dim.html:58:1 (algo_param_dim.Rd:21): Warning: missing </ul> before </div>
coef-cpss-method.html:51:1 (coef-cpss-method.Rd:12): Warning: missing </ul> before </div>
cps.html:58:1 (cps.Rd:21): Warning: missing </ul> before </div>
dat.html:62:1 (dat.Rd:23): Warning: missing </ul> before </div>
mdl.html:58:1 (mdl.Rd:21): Warning: missing </ul> before </div>
ncps.html:58:1 (ncps.Rd:21): Warning: missing </ul> before </div>
params.html:58:1 (params.Rd:21): Warning: missing </ul> before </div>
pelt_pen.html:58:1 (pelt_pen.Rd:21): Warning: missing </ul> before </div>
plot-cpss-method.html:67:1 (plot-cpss-method.Rd:20): Warning: missing </ul> before </div>
summary-cpss-method.html:51:1 (summary-cpss-method.Rd:12): Warning: missing </ul> before </div>
update-cpss-method.html:55:1 (update-cpss-method.Rd:14): Warning: missing </ul> before </div>
update_inputs.html:58:1 (update_inputs.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Stefanie Krügel <stefanie.kruegel@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stefanie",
                      family = "Krügel",
                      role = c("aut", "cre"),
                      email = "stefanie.kruegel@gmail.com"),
               person(given = c("Alessandra", "R."),
                      family = "Brazzale"),
               person(role = "aut"),
               person(given = "Helmut",
                      family = "Kuechenhoff",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
km.sim.survtimes.html:66:1 (km.sim.survtimes.Rd:22): Warning: missing </ul> before </div>
Found the following HTML validation problems:
na_ifin.html:50:1 (na_ifin.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Johann Gagnon-Bartsch <johanngb@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Johann",
                    family = "Gagnon-Bartsch",
                    role = c("aut", "cre"),
                    email = "johanngb@umich.edu")
as necessary.
Maintainer: ‘Jueyu Gao <jueyu@ualberta.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jueyu", "Gao", "&", "Linglong"),
                      family = "Kong",
                      role = "aut"),
               person(given = "Jueyu",
                      family = "Gao",
                      role = "cre",
                      email = "jueyu@ualberta.ca"))
as necessary.
Maintainer: ‘Francesco Bartolucci <francesco.bartolucci@unipg.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francesco",
                      family = "Bartolucci",
                      role = c("aut", "cre"),
                      email = "francesco.bartolucci@unipg.it",
                      comment = "University of Perugia"),
               person(given = "Claudia",
                      family = "Pigini",
                      role = "aut",
                      comment = "University of Ancona \"Politecnica delle Marche\""),
               person(given = "Francesco",
                      family = "Valentini",
                      role = "aut",
                      comment = "University of Ancona \"Politecnica delle Marche\""))
as necessary.
Maintainer: ‘Francis Huang <flhuang2000@yahoo.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) sharedat.Rd:23: Lost braces
    23 | \doi{10.7910/DVN/YXMQZM}{Harvard dataverse}
       |                         ^
Maintainer: ‘Carsten Franz <carsten.franz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carsten",
                    family = "Franz",
                    role = c("aut", "cre"),
                    email = "carsten.franz@gmail.com")
as necessary.
Maintainer: ‘Jim Lemon <drjimlemon@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jim",
                      family = "Lemon,",
                      role = "aut",
                      email = "drjimlemon@gmail.com"),
               person(given = "Jim",
                      family = "Lemon",
                      role = "cre",
                      email = "drjimlemon@gmail.com"))
as necessary.
Maintainer: ‘Gábor Csárdi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gábor",
                    family = "Csárdi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Found the following HTML validation problems:
create_empty_PACKAGES.html:76:1 (create_empty_PACKAGES.Rd:35): Warning: missing </ul> before </div>
with_db.html:53:1 (with_db.Rd:13): Warning: missing </ul> before </div>
with_db_lock.html:52:1 (with_db_lock.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Nick Kunz <nick.kunz@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Kunz",
                    role = c("aut", "cre"),
                    email = "nick.kunz@columbia.edu")
as necessary.
Maintainer: ‘Devin S. Johnson <devin.johnson@noaa.gov>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) crwPredict.Rd:54-68: Lost braces
    54 | \item("predTime"){
       |                  ^
checkRd: (-1) crwPredict.Rd:59: Lost braces
    59 |  no longer the default (see \item{return.type}). If the original data were 
       |                                  ^
Found the following HTML validation problems:
fix_path.html:46:1 (fix_path.Rd:10): Warning: missing </ul> before </div>
sub-.crwIS.html:61:1 (sub-.crwIS.Rd:18): Warning: missing </ul> before </div>
tidy_crwFit.html:47:1 (tidy_crwFit.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
credential_helper.html:58:1 (credential_helper.Rd:20): Warning: missing </ul> before </div>
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following HTML validation problems:
show-methods.html:47:1 (show-methods.Rd:12): Warning: missing </ul> before </div>
summary-methods.html:52:1 (summary-methods.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Patrick Schnell <schnell.31@osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Patrick",
                      family = "Schnell",
                      role = c("aut", "cre"),
                      email = "schnell.31@osu.edu"),
               person(given = "Brad",
                      family = "Carlin",
                      role = "aut"))
as necessary.
Maintainer: ‘Tinniam V Ganesh <tvganesh.85@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Tinniam", "V"),
                    family = "Ganesh",
                    role = c("aut", "cre"),
                    email = "tvganesh.85@gmail.com")
as necessary.
Maintainer: ‘Jason D. Nielsen <jdn@math.carleton.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jason", "D."),
                    family = "Nielsen",
                    role = c("aut", "cre"),
                    email = "drjdnielsen@gmail.com")
as necessary.
Maintainer: ‘Ashley Petersen <ashleyjpete@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ashley",
                    family = "Petersen",
                    role = c("aut", "cre"),
                    email = "ashleyjpete@gmail.com")
as necessary.
Maintainer: ‘Rubens Jose Rosa <rubens@rubensjoserosa.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘CRMetrics.R’ ‘CRMetrics.Rd’ ‘inner_functions.R’
Maintainer: ‘Henning Redestig <henning.red@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Henning",
                    family = "Redestig",
                    role = c("aut", "cre"),
                    email = "henning.red@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) normFit.Rd:39: Lost braces; missing escapes or markup?
    39 | {analytes}}
       | ^
checkRd: (-1) normPred.Rd:27: Lost braces
    27 | ode{standards}, \code{analytes}}
       |    ^
Found the following HTML validation problems:
dinvGamma.html:62:1 (dinvGamma.Rd:18): Warning: missing </ul> before </div>
initialize-DualEndpointOld-method.html:86:1 (initialize-DualEndpointOld-method.Rd:35): Warning: missing </ul> before </div>
pinvGamma.html:62:1 (pinvGamma.Rd:18): Warning: missing </ul> before </div>
plot.gtable.html:51:1 (plot.gtable.Rd:12): Warning: missing </ul> before </div>
qinvGamma.html:62:1 (qinvGamma.Rd:18): Warning: missing </ul> before </div>
rinvGamma.html:54:1 (rinvGamma.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Xiaowei Zhan <zhanxw@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiaowei",
                    family = "Zhan",
                    role = c("aut", "cre"),
                    email = "zhanxw@gmail.com")
as necessary.
Maintainer: ‘Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mohamed", "El", "Fodil"),
                    family = "Ihaddaden",
                    role = c("aut", "cre"),
                    email = "ihaddaden.fodeil@gmail.com")
as necessary.
Found the following HTML validation problems:
cron_load.html:54:1 (cron_load.Rd:14): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘crop.R’ ‘helpers.R’
Maintainer: ‘Bjoern Bornkamp <bbnkmp@mail.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Martin", "Oliver"),
                      family = "Sailer",
                      role = "aut"),
               person(given = "Bjoern",
                      family = "Bornkamp",
                      role = "cre",
                      email = "bbnkmp@mail.de"))
as necessary.
Maintainer: ‘Kornelius Rohmeyer <rohmeyer@small-projects.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kornelius",
                    family = "Rohmeyer",
                    role = c("aut", "cre"),
                    email = "rohmeyer@small-projects.de")
as necessary.
Found the following HTML validation problems:
ClientValue.html:109:1 (ClientValue.Rd:79): Warning: <h5> anchor "Usage" already defined
ClientValue.html:128:1 (ClientValue.Rd:92): Warning: <h5> anchor "Usage" already defined
ClientValue.html:134:1 (ClientValue.Rd:96): Warning: <h5> anchor "Arguments" already defined
ClientValue.html:158:1 (ClientValue.Rd:110): Warning: <h5> anchor "Usage" already defined
ClientValue.html:164:1 (ClientValue.Rd:114): Warning: <h5> anchor "Arguments" already defined
SharedData.html:324:1 (SharedData.Rd:202): Warning: missing </ul> before </div>
SharedData.html:132:1 (SharedData.Rd:76): Warning: <h5> anchor "Usage" already defined
SharedData.html:149:1 (SharedData.Rd:87): Warning: <h5> anchor "Usage" already defined
SharedData.html:165:1 (SharedData.Rd:97): Warning: <h5> anchor "Usage" already defined
SharedData.html:187:1 (SharedData.Rd:113): Warning: <h5> anchor "Usage" already defined
SharedData.html:193:1 (SharedData.Rd:117): Warning: <h5> anchor "Arguments" already defined
SharedData.html:234:1 (SharedData.Rd:148): Warning: <h5> anchor "Usage" already defined
SharedData.html:240:1 (SharedData.Rd:152): Warning: <h5> anchor "Arguments" already defined
SharedData.html:272:1 (SharedData.Rd:174): Warning: <h5> anchor "Usage" already defined
SharedData.html:278:1 (SharedData.Rd:178): Warning: <h5> anchor "Arguments" already defined
SharedData.html:301:1 (SharedData.Rd:191): Warning: <h5> anchor "Usage" already defined
SharedData.html:307:1 (SharedData.Rd:195): Warning: <h5> anchor "Arguments" already defined
maintain_selection.html:56:1 (maintain_selection.Rd:15): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Davis Weaver [aut, cre] (0000-0003-3086-497X)’
  Authors@R: ‘Davis Weaver [aut, cre] (orcid: 0000-0003-3086-497X)’
Found the following HTML validation problems:
calc_np.html:50:1 (calc_np.Rd:12): Warning: missing </ul> before </div>
fcalc_np_all.html:58:1 (fcalc_np_all.Rd:16): Warning: missing </ul> before </div>
get_topn.html:50:1 (get_topn.Rd:12): Warning: missing </ul> before </div>
node_repression.html:73:1 (node_repression.Rd:27): Warning: missing </ul> before </div>
Maintainer: ‘Pein Florian <f.pein@lancaster.ac.uk>’

The Description field contains
  <arXiv:2112.03220>. Can be customised by providing different
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Maintainer: ‘Javier Espinosa <javier.espinosa.b@usach.cl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Javier",
                    family = "Espinosa",
                    role = c("aut", "cre"),
                    email = "javier.espinosa.b@usach.cl")
as necessary.
checkRd: (-1) confRegCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the constrained MLEs given beta_{0r}.}
       |                   ^
checkRd: (-1) confRegCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the constrained MLEs given beta_{0r}.}
       |                                                                                    ^
checkRd: (-1) confRegCCR.Rd:27: Lost braces; missing escapes or markup?
    27 | beta_{0r} in \code{paramVals}, which are those of interest, usually the ones
       |      ^
checkRd: (-1) confRegUCRandUCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the unconstrained MLEs given beta_{0r}.}
       |                   ^
checkRd: (-1) confRegUCRandUCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the unconstrained MLEs given beta_{0r}.}
       |                                                                                      ^
checkRd: (-1) confRegUCRandUCCR.Rd:27: Lost braces; missing escapes or markup?
    27 | beta_{0r} in \code{paramVals}, which are those of interest, usually the ones
       |      ^
Maintainer: ‘Aurelien Latouche <aurelien.latouche@cnam.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bingqing",
                      family = "Zhou",
                      role = "aut"),
               person(given = "Aurelien",
                      family = "Latouche",
                      role = c("aut", "cre"),
                      email = "aurelien.latouche@cnam.fr"))
as necessary.
Maintainer: ‘Michael Klein <michael.klein@yale.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Klein",
                    role = c("aut", "cre"),
                    email = "michael.klein@yale.edu")
as necessary.
'library' or 'require' call not declared from: ‘ggplot2’
Found the following HTML validation problems:
crsiv.html:337:1 (crsiv.Rd:277): Warning: <h3> anchor "_sec_note" already defined
Maintainer: ‘Dae Woong Ham <daewoongham@g.harvard.edu>’

The Description field contains
  to Test Causal Hypotheses in Conjoint Analysis" <arXiv:2201.08343>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
fitted.CRTgeeDR.html:51:1 (fitted.CRTgeeDR.Rd:13): Warning: missing </ul> before </div>
getCI.html:54:1 (getCI.Rd:14): Warning: missing </ul> before </div>
getOMPlot.html:59:1 (getOMPlot.Rd:17): Warning: missing </ul> before </div>
getPSPlot.html:59:1 (getPSPlot.Rd:17): Warning: missing </ul> before </div>
predict.CRTgeeDR.html:55:1 (predict.CRTgeeDR.Rd:15): Warning: missing </ul> before </div>
print.CRTgeeDR.html:51:1 (print.CRTgeeDR.Rd:13): Warning: missing </ul> before </div>
print.summary.CRTgeeDR.html:51:1 (print.summary.CRTgeeDR.Rd:13): Warning: missing </ul> before </div>
summary.CRTgeeDR.html:51:1 (summary.CRTgeeDR.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Michael A Rotondi <mrotondi@yorku.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "A"),
                    family = "Rotondi",
                    role = c("aut", "cre"),
                    email = "mrotondi@yorku.ca")
as necessary.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘helpers.R’
Found the following HTML validation problems:
AbstractCategory.html:51:1 (AbstractCategory.Rd:19): Warning: missing </ul> before </div>
crunchAPI.html:77:1 (crunchAPI.Rd:31): Warning: missing </ul> before </div>
cube-missingness.html:61:1 (cube-missingness.Rd:26): Warning: missing </ul> before </div>
ensureValidCase.html:69:1 (ensureValidCase.Rd:22): Warning: missing </ul> before </div>
fortify.html:56:1 (fortify.Rd:18): Warning: missing </ul> before </div>
login.html:52:1 (login.Rd:16): Warning: missing </ul> before </div>
palettes.html:63:1 (palettes.Rd:24): Warning: missing </ul> before </div>
replaceCharWithNumeric.html:56:1 (replaceCharWithNumeric.Rd:14): Warning: missing </ul> before </div>
retry.html:60:1 (retry.Rd:18): Warning: missing </ul> before </div>
serialPaste.html:51:1 (serialPaste.Rd:12): Warning: missing </ul> before </div>
streamRows.html:52:1 (streamRows.Rd:14): Warning: missing </ul> before </div>
tuple-methods.html:110:1 (tuple-methods.Rd:68): Warning: missing </ul> before </div>
validateNamesInDims.html:55:1 (validateNamesInDims.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Benjamin M. Taylor <benjamin.taylor.software@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Benjamin", "M.", "Taylor", "Additional", "contributions", "Bikash", "Parida", "Jacob"),
                      family = "Davies",
                      role = "aut"),
               person(given = c("Benjamin", "M."),
                      family = "Taylor",
                      role = "cre",
                      email = "benjamin.taylor.software@gmail.com"))
as necessary.
checkRd: (-1) cruts-package.Rd:21: Lost braces
    21 | section{Dependencies}{
       |        ^
checkRd: (-1) cruts-package.Rd:21-24: Lost braces
    21 | section{Dependencies}{
       |                      ^
checkRd: (-1) cruts-package.Rd:26: Lost braces
    26 | section{Citation}{
       |        ^
checkRd: (-1) cruts-package.Rd:26-28: Lost braces
    26 | section{Citation}{
       |                  ^
checkRd: (-1) cruts-package.Rd:30-32: Lost braces
    30 | references{
       |           ^
Maintainer: ‘Ziqiang Lin <ziqiang.lin@nyulangone.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ziqiang",
                      family = "Lin",
                      role = c("aut", "cre"),
                      email = "ziqiang.lin@nyulangone.org"),
               person(given = c("Eugene", "M"),
                      family = "Laska",
                      role = "aut"),
               person(given = c("Carole", "E"),
                      family = "Siegel",
                      role = "aut"),
               person(given = "Wangjian",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Qiaoxuan",
                      family = "Lin",
                      role = "aut"),
               person(given = "Bo",
                      family = "Ye.",
                      role = "aut"))
as necessary.
Maintainer: ‘Vivian R. Steiger <viv.datascientist@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Vivian", "R."),
                    family = "Steiger",
                    role = c("aut", "cre"),
                    email = "viv.datascientist@gmail.com")
as necessary.
Maintainer: ‘Haydar Demirhan <haydar.demirhan@rmit.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haydar",
                    family = "Demirhan",
                    role = c("aut", "cre"),
                    email = "haydar.demirhan@rmit.edu.au",
                    comment = c(ORCID = "0000-0002-8565-4710"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Claudio Pozo Valenzuela <claudiopozova@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Claudio", "Pozo"),
                      family = "Valenzuela",
                      role = c("aut", "cre"),
                      email = "claudiopozova@gmail.com"),
               person(given = "Saddys",
                      family = "Rodriguez-Llamazares",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
prediction_interval.html:62:1 (prediction_interval.Rd:18): Warning: missing </ul> before </div>
prediction_interval.glm.html:74:1 (prediction_interval.glm.Rd:27): Warning: missing </ul> before </div>
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sungwook",
                      family = "Kim",
                      role = "aut"),
               person(given = c("Michael", "P."),
                      family = "Fay",
                      role = "cre",
                      email = "mfay@niaid.nih.gov"))
as necessary.
Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.
Found the following HTML validation problems:
calculateReliabilities.html:97:1 (calculateReliabilities.Rd:47): Warning: missing </ul> before </div>
csem_arguments.html:815:1 (csem_arguments.Rd:507): Warning: missing </ul> before </div>
nonlinear_estimation_utilities.html:72:1 (nonlinear_estimation_utilities.Rd:33): Warning: missing </ul> before </div>
Maintainer: ‘Anantha Janakiraman <anantharaman.j@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anantha",
                    family = "Janakiraman",
                    role = c("aut", "cre"),
                    email = "anantharaman.j@gmail.com")
as necessary.
Found the following HTML validation problems:
PCR.html:54:1 (PCR.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Koen W. De Bock <kdebock@audencia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Koen", "W."),
                      family = "De Bock",
                      role = c("aut", "cre"),
                      email = "kdebock@audencia.com"),
               person(given = "Kristof",
                      family = "Coussement",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Lessmann",
                      role = "aut"))
as necessary.
Maintainer: ‘Aixiang Jiang <aijiang@bccrc.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aixiang",
                    family = "Jiang",
                    role = c("aut", "cre", "cph"),
                    email = "aijiang@bccrc.ca",
                    comment = c(ORCID = "0000-0002-6153-7595"))
as necessary.

The Description field contains
  <arXiv:1603.02754>, - Aoki et al. (2023) <doi:10.1200/JCO.23.01115>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Dmitry Pavlyuk <Dmitry.V.Pavlyuk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dmitry",
                      family = "Pavlyuk",
                      role = c("aut", "cre"),
                      email = "dmitry.v.pavlyuk@gmail.com"),
               person(given = "Eugene",
                      family = "Girtcius",
                      role = "aut"))
as necessary.
Maintainer: ‘Junho Yang <junhoyang@stat.tamu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Junho",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "junhoyang@stat.tamu.edu")
as necessary.
Maintainer: ‘Caleb Lucas <calebjlucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Caleb",
                      family = "Lucas",
                      role = c("aut", "cre"),
                      email = "calebjlucas@gmail.com",
                      comment = "https://caleblucas.com/"),
               person(given = "Joshua",
                      family = "McCrain",
                      role = "aut",
                      comment = "http://joshuamccrain.com/"))
as necessary.
Maintainer: ‘Caleb Lucas <calebjlucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Caleb",
                      family = "Lucas",
                      role = c("aut", "cre"),
                      email = "calebjlucas@gmail.com",
                      comment = "https://caleblucas.com/"),
               person(given = "Joshua",
                      family = "McCrain",
                      role = "aut",
                      comment = "http://joshuamccrain.com/"))
as necessary.
Found the following HTML validation problems:
vctrs.html:78:1 (vctrs.Rd:38): Warning: missing </ul> before </div>
Maintainer: ‘Deniz Yenigun <deniz.yenigun@bilgi.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Deniz",
                      family = "Yenigun",
                      role = c("aut", "cre"),
                      email = "deniz.yenigun@bilgi.edu.tr"),
               person(given = "Gunes",
                      family = "Ertan",
                      role = "aut"),
               person(given = "Michael",
                      family = "Siciliano",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘atm.Rd’:
    http://dx.doi.org/10.1016/j.socnet.2012.06.004
  File ‘cssTools-package.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
  File ‘highTechManagers.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
  File ‘s14.Rd’:
    http://dx.doi.org/10.1007/BF01896809
  File ‘sliceQuality.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
    http://dx.doi.org/10.1016/j.socnet.2012.06.004
Maintainer: ‘Jonas M. B. Haslbeck <jonas.haslbeck@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jonas", "M.", "B."),
                      family = "Haslbeck",
                      role = c("aut", "cre"),
                      email = "jonas.haslbeck@gmail.com"),
               person(given = c("Dirk", "U."),
                      family = "Wulff",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
lookup.html:51:1 (lookup.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
keep_sundays_and_latest_date_internal.html:63:1 (keep_sundays_and_latest_date_internal.Rd:21): Warning: missing </ul> before </div>
now_c.html:46:1 (now_c.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Tim Bergsma <bergsmat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tim",
                    family = "Bergsma",
                    role = c("aut", "cre"),
                    email = "bergsmat@gmail.com")
as necessary.
Maintainer: ‘Robin Gower <csvwr@infonomics.ltd.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Robin",
                    family = "Gower",
                    role = c("aut", "cre"),
                    email = "csvwr@infonomics.ltd.uk")
as necessary.
Maintainer: ‘Thomas J. Leeper <thosjleeper@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Francois Ritter <ritter.francois@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Clark Fitzgerald <fitzgerald@csus.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/julianofhernandez/ctf
which should likely be
  https://github.com/julianofhernandez/ctf/issues
instead.
Maintainer: ‘Ningning Xu <ningningxu312@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ningning",
                    family = "Xu",
                    role = c("aut", "cre"),
                    email = "ningningxu312@gmail.com")
as necessary.
Maintainer: ‘Danny Arends <Danny.Arends@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Danny",
                      family = "Arends",
                      role = c("aut", "cre"),
                      email = "Danny.Arends@gmail.com"),
               person(given = "Yang",
                      family = "Li",
                      role = "aut"),
               person(given = c("Gudrun", "A"),
                      family = "Brockmann",
                      role = "aut"),
               person(given = c("Ritsert", "C"),
                      family = "Jansen",
                      role = "aut"),
               person(given = c("Robert", "W"),
                      family = "Williams",
                      role = "aut"),
               person(given = "Pjotr",
                      family = "Prins",
                      role = "aut"))
as necessary.
Maintainer: ‘Cheng Ju <jucheng1992@gmail.com>’

The Description field contains
  algorithm (Ju et al. (2017) <arXiv:1706.10029>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
deltahat.fun.html:58:1 (deltahat.fun.Rd:16): Warning: missing </ul> before </div>
obj_fun_delta_hat.html:62:1 (obj_fun_delta_hat.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ctCompareExpected.html:80:1 (ctCompareExpected.Rd:31): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ctDeintervalise.html:58:1 (ctDeintervalise.Rd:16): Warning: missing </ul> before </div>
ctStanUpdModel.html:58:1 (ctStanUpdModel.Rd:16): Warning: missing </ul> before </div>
ctWideNames.html:81:1 (ctWideNames.Rd:32): Warning: missing </ul> before </div>
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘John T. Willse <jtwillse@uncg.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "T."),
                    family = "Willse",
                    role = c("aut", "cre"),
                    email = "jtwillse@uncg.edu")
as necessary.
Maintainer: ‘John T. Willse <willse@uncg.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "T."),
                    family = "Willse",
                    role = c("aut", "cre"),
                    email = "willse@uncg.edu")
as necessary.
Found the following files/directories:
  ‘Hello.csv’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘apply_by_blocks.R’ ‘balance_by_blocks.Rd’ ‘balance_matrix.R’
    ‘balance_matrix.Rd’ ‘make_non_negative.Rd’ ‘round_by_blocks.Rd’
    ‘round_matrix.R’ ‘round_matrix.Rd’ ‘round_vector.Rd’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘accessors.Rd’ ‘as-cubble.R’ ‘as_cubble.Rd’ ‘check-key.R’
    ‘climate-data.Rd’ ‘covid.Rd’ ‘cubble-attrs.R’ ‘cubble-class.R’
    ‘cubble-print.R’ ‘dplyr.R’ ‘dplyr.Rd’ ‘face-spatial-temporal.R’
    ‘face.Rd’ ‘glyph.R’ ‘glyph.Rd’ ‘make_spatial_sf.Rd’
    ‘make_temporal_tsibble.Rd’ ‘matching.R’ ‘matching.Rd’ ‘netcdf.R’
    ‘sf.R’ ‘test-data.Rd’ ‘tsibble.R’ ‘tsibble.Rd’ ‘unfold.R’ ‘unfold.Rd’
Found the following HTML validation problems:
update.html:49:1 (update.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cubeOptions.html:58:1 (cubeOptions.Rd:16): Warning: missing </ul> before </div>
legendOptions.html:54:1 (legendOptions.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Wei-Chen Chen <wccsnow@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Alec Stephenson <alec_stephenson@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alec",
                      family = "Stephenson.",
                      role = "aut"),
               person(given = "Alec",
                      family = "Stephenson",
                      role = "cre",
                      email = "alec_stephenson@hotmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  solvers. See Rokicki, T. (2008) <arXiv:0803.3435> for the Kociemba
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
Q2gecub.html:51:1 (Q2gecub.Rd:12): Warning: missing </ul> before </div>
Qunogecub.html:55:1 (Qunogecub.Rd:14): Warning: missing </ul> before </div>
effecubecsi.html:60:1 (effecubecsi.Rd:17): Warning: missing </ul> before </div>
ellegecub.html:74:1 (ellegecub.Rd:24): Warning: missing </ul> before </div>
kkk.html:52:1 (kkk.Rd:12): Warning: missing </ul> before </div>
loglikcub00.html:59:1 (loglikcub00.Rd:16): Warning: missing </ul> before </div>
loglikcub0q.html:64:1 (loglikcub0q.Rd:19): Warning: missing </ul> before </div>
loglikcubecov.html:78:1 (loglikcubecov.Rd:27): Warning: missing </ul> before </div>
loglikcubp0.html:64:1 (loglikcubp0.Rd:19): Warning: missing </ul> before </div>
loglikcubpq.html:69:1 (loglikcubpq.Rd:22): Warning: missing </ul> before </div>
loglikcubshe.html:67:1 (loglikcubshe.Rd:20): Warning: missing </ul> before </div>
loglikcushcov.html:64:1 (loglikcushcov.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Charles-Édouard Giguère <ce.giguere@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Charles-Édouard",
                    family = "Giguère",
                    role = c("aut", "cre"),
                    email = "ce.giguere@gmail.com")
as necessary.
Maintainer: ‘Kevin Stadler <a00425926@unet.univie.ac.at>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘mantel.test.Rd’:
    https://doi.org/10.1093/sysbio/32.1.21
    https://doi.org/10.1086/341527
Maintainer: ‘Shuo Li <skyli@bu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shuo",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "skyli@bu.edu"),
               person(given = "Xuan",
                      family = "Liu",
                      role = "aut",
                      email = "liuxuan@bu.edu"),
               person(given = "Qiong",
                      family = "Yang",
                      role = "aut",
                      email = "qyang@bu.edu"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘create_cure_dataframe.R’ ‘cure_plot.R’ ‘resample_residuals.R’
Found the following HTML validation problems:
AIC.cm.html:55:1 (AIC.cm.Rd:14): Warning: missing </ul> before </div>
AIC.gfcm.html:55:1 (AIC.gfcm.Rd:14): Warning: missing </ul> before </div>
BIC.cm.html:51:1 (BIC.cm.Rd:12): Warning: missing </ul> before </div>
BIC.gfcm.html:51:1 (BIC.gfcm.Rd:12): Warning: missing </ul> before </div>
plot.crude.html:80:1 (plot.crude.Rd:27): Warning: missing </ul> before </div>
plot.le.html:80:1 (plot.le.Rd:27): Warning: missing </ul> before </div>
plot.lts.html:80:1 (plot.lts.Rd:27): Warning: missing </ul> before </div>
Found the following HTML validation problems:
multipart.html:62:1 (multipart.Rd:20): Warning: missing </ul> before </div>
Maintainer: ‘Eva Koritakova <koritakova@iba.muni.cz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eva",
                      family = "Koritakova",
                      role = c("aut", "cre"),
                      email = "koritakova@iba.muni.cz",
                      comment = c(ROR = "Janousova")),
               person(given = "Tomas",
                      family = "Pavlik",
                      role = "aut"),
               person(given = "Jiri",
                      family = "Mayer",
                      role = "aut"),
               person(given = "Ladislav",
                      family = "Dusek",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot_curriculum_graph.R’
Maintainer: ‘Thomas Lin Pedersen <thomasp85@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Thomas", "Lin"),
                    family = "Pedersen",
                    role = c("aut", "cre"),
                    email = "thomasp85@gmail.com")
as necessary.
Maintainer: ‘Chris Mann <cmann3@unl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chris",
                    family = "Mann",
                    role = c("aut", "cre"),
                    email = "cmann3@unl.edu")
as necessary.
Maintainer: ‘Christopher Murphy <cmurphy0313@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kimihiro",
                      family = "Noguchi",
                      role = "aut",
                      email = "kimihiro.noguchi@wwu.edu"),
               person(given = "Christopher",
                      family = "Murphy",
                      role = "cre",
                      email = "cmurphy0313@gmail.com"))
as necessary.
Found the following files/directories:
  ‘Adjusted_p_values.pdf’ ‘Effect_Size_Curves.pdf’
  ‘Mean_Difference_Curves.pdf’
Found the following HTML validation problems:
CustomDerivative.html:101:1 (CustomDerivative.Rd:81): Warning: <h3> anchor "Methods" already defined
CustomDerivative.html:189:1 (CustomDerivative.Rd:132): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:211:1 (CustomDerivative.Rd:145): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:217:1 (CustomDerivative.Rd:149): Warning: <h5> anchor "Returns" already defined
CustomDerivative.html:233:1 (CustomDerivative.Rd:158): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:239:1 (CustomDerivative.Rd:162): Warning: <h5> anchor "Returns" already defined
CustomDerivative.html:255:1 (CustomDerivative.Rd:171): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:261:1 (CustomDerivative.Rd:175): Warning: <h5> anchor "Returns" already defined
CustomDerivative.html:277:1 (CustomDerivative.Rd:184): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:283:1 (CustomDerivative.Rd:188): Warning: <h5> anchor "Returns" already defined
CustomDerivative.html:299:1 (CustomDerivative.Rd:197): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:305:1 (CustomDerivative.Rd:201): Warning: <h5> anchor "Returns" already defined
CustomDerivative.html:322:1 (CustomDerivative.Rd:210): Warning: <h5> anchor "Usage" already defined
CustomDerivative.html:328:1 (CustomDerivative.Rd:214): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘Koen W. De Bock <kdebock@audencia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Koen", "W."),
                    family = "De Bock",
                    role = c("aut", "cre"),
                    email = "kdebock@audencia.com")
as necessary.
Maintainer: ‘Paul Kabaila <p.kabaila@latrobe.edu.au>’

The Description field contains
  Kabaila (2022) <arXiv:2211.04729>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
nonzero.singleton.html:51:1 (nonzero.singleton.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Iago Montero Nunez <iagomontero95@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Iago", "Montero"),
                      family = "Nuñez",
                      role = "aut"),
               person(given = c("Iago", "Montero"),
                      family = "Nunez",
                      role = "cre",
                      email = "iagomontero95@gmail.com"))
as necessary.
Maintainer: ‘Boxiang Wang <boxiang-wang@uiowa.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Douglas", "M."),
                      family = "Hawkins",
                      role = "aut"),
               person(given = c("David", "H."),
                      family = "Olwell",
                      role = "aut"),
               person(given = "Boxiang",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "boxiang-wang@uiowa.edu"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
plot.cusum.html:50:1 (plot.cusum.Rd:12): Warning: missing </ul> before </div>
weights_t.html:54:1 (weights_t.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.multi_cutpointr.html:51:1 (plot.multi_cutpointr.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Yimin Chen <chenyimin0226@126.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yimin",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "chenyimin0226@126.com"),
               person(given = "Zhang",
                      family = "Jinxin",
                      role = "aut"))
as necessary.
Maintainer: ‘Erin LeDell <oss@ledell.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Erin",
                      family = "LeDell",
                      role = c("aut", "cre"),
                      email = "oss@ledell.org"),
               person(given = "Maya",
                      family = "Petersen",
                      role = "aut"),
               person(given = "Mark",
                      family = "van der Laan",
                      role = "aut"))
as necessary.
Running examples in ‘cvdprevent-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cvd_area_details
> ### Title: Area details
> ### Aliases: cvd_area_details
> 
> ### ** Examples
> 
> # to see details for '3 Centres PCN' (area_id = 1103) use the following:
> # get the list of tibbles from the function
> returned_list <- cvd_area_details(time_period_id = 17, area_id = 1103)
> 
> # view area details
> returned_list$area_details |>
+   dplyr::select(AreaCode, AreaName)
# A tibble: 1 × 2
  AreaCode AreaName     
  <chr>    <chr>        
1 U60176   3 Centres PCN
> 
> # view details for the parent of this area
> returned_list$area_parent_details |>
+   dplyr::select(AreaID, AreaName, SystemLevelID)
# A tibble: 1 × 3
  AreaID AreaName                       SystemLevelID
   <int> <chr>                                  <int>
1   7959 NHS West Yorkshire ICB - X2C4Y             8
> 
> # view details for the children of this area
> returned_list$area_child_details |>
+   dplyr::select(AreaID, AreaName, SystemLevelID)
Error in UseMethod("select") : 
  no applicable method for 'select' applied to an object of class "NULL"
Calls: <Anonymous>
Execution halted
Running ‘testthat.R’ [2s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(cvdprevent)
  > 
  > test_check("cvdprevent")
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-cvd_api_functions.R:73:3'): cvd_area_nested_subsystems works ──
  Names of `test` ('level_1', 'level_2', 'level_3') don't match 'level_1', 'level_2', 'level_3', 'level_4'
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
  Error: Test failures
  Execution halted
Error(s) in re-building vignettes:
  ...
--- re-building ‘using_cvdprevent.Rmd’ using rmarkdown

Quitting from using_cvdprevent.Rmd:125-129 [unnamed-chunk-11]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `UseMethod()`:
! no applicable method for 'select' applied to an object of class "NULL"
---
Backtrace:
    ▆
 1. ├─gt::gt(...)
 2. │ └─"rowname" %in% names(data)
 3. └─dplyr::select(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'using_cvdprevent.Rmd' failed with diagnostics:
no applicable method for 'select' applied to an object of class "NULL"
--- failed re-building ‘using_cvdprevent.Rmd’

SUMMARY: processing the following file failed:
  ‘using_cvdprevent.Rmd’

Error: Vignette re-building failed.
Execution halted
Maintainer: ‘Jose Gama <rxprtgama@gmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘scoreRoth28Graphic.Rd’:
    http://dx.doi.org/10.1016/S0042-6989(97)00433-1
Maintainer: ‘Ben Marwick <benmarwick@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: www.jstor.org/stable/90707
    From: inst/doc/how_to_test_CVs.html
  URI: CONDUCT.md
    From: README.md
Found the following HTML validation problems:
print.CVglasso.html:51:1 (print.CVglasso.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Romain Azais <romain.azais@inria.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Romain",
                      family = "Azais",
                      role = c("aut", "cre"),
                      email = "romain.azais@inria.fr"),
               person(given = "Sandie",
                      family = "Ferrigno",
                      role = "aut"),
               person(given = "Marie-Jose",
                      family = "Martinez",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
cross_validate_fn.html:395:1 (cross_validate_fn.Rd:437): Warning: <h5> anchor "Gaussian" already defined
evaluate.html:145:1 (evaluate.Rd:60): Warning: <h5> anchor "Probabilities-+28Preferable+29" already defined
evaluate.html:182:1 (evaluate.Rd:76): Warning: <h5> anchor "Classes" already defined
most_challenging.html:139:1 (most_challenging.Rd:61): Warning: <h5> anchor "Probabilities-+28Preferable+29" already defined
most_challenging.html:176:1 (most_challenging.Rd:77): Warning: <h5> anchor "Classes" already defined
most_challenging.html:273:1 (most_challenging.Rd:122): Warning: <h4> anchor "Gaussian" already defined
most_challenging.html:297:1 (most_challenging.Rd:132): Warning: <h5> anchor "threshold_is-+22percentage+22" already defined
most_challenging.html:308:1 (most_challenging.Rd:139): Warning: <h5> anchor "threshold_is-+22score+22" already defined
most_challenging.html:327:1 (most_challenging.Rd:152): Warning: <h4> anchor "Binomial+2C-Multinomial" already defined
most_challenging.html:342:1 (most_challenging.Rd:164): Warning: <h4> anchor "Gaussian" already defined
validate_fn.html:404:1 (validate_fn.Rd:428): Warning: <h5> anchor "Gaussian" already defined
Maintainer: ‘Tammo Krueger <tammokrueger@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tammo",
                      family = "Krueger",
                      role = c("aut", "cre"),
                      email = "tammokrueger@googlemail.com"),
               person(given = "Mikio",
                      family = "Braun",
                      role = "aut"))
as necessary.
Maintainer: ‘Donghoh Kim <donghoh.kim@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Donghoh",
                      family = "Kim",
                      role = c("aut", "cre"),
                      email = "donghoh.kim@gmail.com"),
               person(given = "Hee-Seok",
                      family = "Oh",
                      role = "aut",
                      email = "heeseok@stats.snu.ac.kr"))
as necessary.
Maintainer: ‘Jiqiang Guo <guojq28@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jiqiang",
                    family = "Guo",
                    role = c("aut", "cre"),
                    email = "guojq28@gmail.com")
as necessary.
Maintainer: ‘Gabor Csardi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gabor",
                    family = "Csardi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Maintainer: ‘Peter Biber <castor.fiber@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Biber",
                    role = c("aut", "cre"),
                    email = "castor.fiber@gmx.de")
as necessary.
checkRd: (-1) fit.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fit.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fit.Rd:39: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
print.summary.CytOpt.html:51:1 (print.summary.CytOpt.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plotTernary.simMat.html:185:1 (plotTernary.simMat.Rd:102): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ok_to_proceed.html:46:1 (ok_to_proceed.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Christopher Gandrud <christopher.gandrud@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christopher",
                    family = "Gandrud",
                    role = c("aut", "cre"),
                    email = "christopher.gandrud@gmail.com")
as necessary.
Found the following HTML validation problems:
D3partitionR-shiny.html:68:1 (D3partitionR-shiny.Rd:25): Warning: missing </ul> before </div>
compute_unique_leaf_name.html:46:1 (compute_unique_leaf_name.Rd:10): Warning: missing </ul> before </div>
find_min_max_tree.html:50:1 (find_min_max_tree.Rd:12): Warning: missing </ul> before </div>
get_all_nodes_names.html:50:1 (get_all_nodes_names.Rd:12): Warning: missing </ul> before </div>
tooltip_builder.html:46:1 (tooltip_builder.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mauricio Vargas <oec@media.mit.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mauricio",
                      family = "Vargas",
                      role = c("aut", "cre"),
                      email = "oec@media.mit.edu"),
               person(given = "Joshua",
                      family = "Kunst",
                      role = "aut"),
               person(given = "Dave",
                      family = "Landry",
                      role = "ctb"),
               person(family = "Datawheel",
                      role = "cph"))
as necessary.
Found the following HTML validation problems:
d3plus-shiny.html:68:1 (d3plus-shiny.Rd:25): Warning: missing </ul> before </div>
Found the following HTML validation problems:
d3po_template.html:46:1 (d3po_template.Rd:10): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘d3TreeFunctions.R’
Found the following HTML validation problems:
d3tree-shiny.html:68:1 (d3tree-shiny.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "John",
                    family = "Maindonald",
                    role = c("aut", "cre"),
                    email = "jhmaindonald@gmail.com")
as necessary.
checkRd: (-1) fpiter.Rd:55-58: Lost braces
    55 |     \code{tol}{  A small, positive scalar that determines when iterations
       |               ^
checkRd: (-1) fpiter.Rd:60-61: Lost braces
    60 |     \code{maxiter}{  An integer denoting the maximum limit on the number of
       |                   ^
checkRd: (-1) fpiter.Rd:63-65: Lost braces
    63 |     \code{trace}{  A logical variable denoting whether some of the intermediate
       |                 ^
Maintainer: ‘James Curran <j.curran@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Curran",
                      role = c("aut", "cre"),
                      email = "j.curran@auckland.ac.nz"),
               person(given = "Danny",
                      family = "Chang",
                      role = "aut"))
as necessary.
checkRd: (-1) formatScientificTeX.Rd:33: Lost braces; missing escapes or markup?
    33 | function will return  " 3.0\\\\times 10^{2}"
       |                                         ^
Maintainer: ‘Johannes Textor <johannes.textor@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Johannes",
                      family = "Textor",
                      role = c("aut", "cre"),
                      email = "johannes.textor@gmx.de"),
               person(given = "Benito",
                      family = "van der Zander",
                      role = "aut"),
               person(given = "Ankur",
                      family = "Ankan",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
as.dagitty.html:50:1 (as.dagitty.Rd:12): Warning: missing </ul> before </div>
completeDAG.html:49:1 (completeDAG.Rd:11): Warning: missing </ul> before </div>
convert.html:55:1 (convert.Rd:14): Warning: missing </ul> before </div>
downloadGraph.html:48:1 (downloadGraph.Rd:10): Warning: missing </ul> before </div>
exogenousVariables.html:47:1 (exogenousVariables.Rd:10): Warning: missing </ul> before </div>
impliedCovarianceMatrix.html:75:1 (impliedCovarianceMatrix.Rd:29): Warning: missing </ul> before </div>
is.dagitty.html:46:1 (is.dagitty.Rd:10): Warning: missing </ul> before </div>
randomDAG.html:52:1 (randomDAG.Rd:12): Warning: missing </ul> before </div>
simulateLogistic.html:82:1 (simulateLogistic.Rd:32): Warning: missing </ul> before </div>
topologicalOrdering.html:48:1 (topologicalOrdering.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Lutz P Breitling <l.breitling@posteo.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Lutz", "P"),
                    family = "Breitling",
                    role = c("aut", "cre"),
                    email = "l.breitling@posteo.de")
as necessary.
Maintainer: ‘Niklas Hohmann <Niklas.Hohmann@fau.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Niklas",
                    family = "Hohmann",
                    role = c("aut", "cre"),
                    email = "niklas.hohmann@fau.de")
as necessary.
Found the following HTML validation problems:
plant_phylo.html:49:1 (plant_phylo.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
DAISIE_plot_stt.html:73:1 (DAISIE_plot_stt.Rd:30): Warning: missing </ul> before </div>
DAISIE_sim_core_cr.html:172:1 (DAISIE_sim_core_cr.Rd:79): Warning: missing </ul> before </div>
DAISIE_sim_core_cr_shift.html:178:1 (DAISIE_sim_core_cr_shift.Rd:83): Warning: missing </ul> before </div>
DAISIE_sim_core_time_dep.html:219:1 (DAISIE_sim_core_time_dep.Rd:114): Warning: missing </ul> before </div>
DAISIE_sim_core_trait_dep.html:217:1 (DAISIE_sim_core_trait_dep.Rd:108): Warning: missing </ul> before </div>
DAISIE_sim_min_type2.html:184:1 (DAISIE_sim_min_type2.Rd:92): Warning: missing </ul> before </div>
get_trans_rate.html:78:1 (get_trans_rate.Rd:23): Warning: missing </ul> before </div>
Maintainer: ‘Ali Uenlue <ali.uenlue@tum.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
install_dependencies.html:47:1 (install_dependencies.Rd:10): Warning: missing </ul> before </div>
plot.model_parts.html:88:1 (plot.model_parts.Rd:33): Warning: missing </ul> before </div>
plot.predict_parts.html:142:1 (plot.predict_parts.Rd:55): Warning: missing </ul> before </div>
plot.predict_profile.html:98:1 (plot.predict_profile.Rd:37): Warning: missing </ul> before </div>
print.description.html:51:1 (print.description.Rd:12): Warning: missing </ul> before </div>
print.model_diagnostics.html:51:1 (print.model_diagnostics.Rd:12): Warning: missing </ul> before </div>
print.model_info.html:51:1 (print.model_info.Rd:12): Warning: missing </ul> before </div>
print.model_profile.html:51:1 (print.model_profile.Rd:12): Warning: missing </ul> before </div>
print.predict_diagnostics.html:51:1 (print.predict_diagnostics.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Szymon Maksymiuk <sz.maksymiuk@gmail.com>’

The Description field contains
  'DALEXtra' creates 'DALEX' Biecek (2018) <arXiv:1806.08915> explainer
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
print.scikitlearn_set.html:51:1 (print.scikitlearn_set.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Brecht Devleesschauwer <brechtdv@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘DALY-package.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
  File ‘DALYcalculator.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
  File ‘setStdLE.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
Maintainer: ‘Damian Siniakowicz <DamianSiniakowicz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Damian",
                    family = "Siniakowicz",
                    role = c("aut", "cre"),
                    email = "damiansiniakowicz@gmail.com")
as necessary.
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Rampal", "S.", "Etienne", "&", "Alex", "L."),
                      family = "Pigot",
                      role = "aut"),
               person(given = c("Rampal", "S."),
                      family = "Etienne",
                      role = "cre",
                      email = "r.s.etienne@rug.nl"))
as necessary.
Maintainer: ‘David Garibay <dgari039@uottawa.ca>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘beta_params.Rd’:
    \keyword{distribution;}
  File ‘calc_evpi.Rd’:
    \keyword{information;}
  File ‘dirichlet_params.Rd’:
    \keyword{distribution;}
  File ‘gamma_params.Rd’:
    \keyword{distribution;}
  File ‘lnorm_params.Rd’:
    \keyword{distribution;}
Found the following HTML validation problems:
rdirichlet.html:54:1 (rdirichlet.Rd:17): Warning: missing </ul> before </div>
Error(s) in re-building vignettes:
  ...
--- re-building ‘dams.Rmd’ using rmarkdown

Quitting from dams.Rmd:82-119 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! <ggplot2::labels> object is invalid:
- every label must be named.
---
Backtrace:
    ▆
 1. └─ggplot2::labs(...)
 2.   └─ggplot2::class_labels(args)
 3.     └─S7::new_object(labels)
 4.       └─S7::validate(object, recursive = !parent_validated)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'dams.Rmd' failed with diagnostics:
<ggplot2::labels> object is invalid:
- every label must be named.
--- failed re-building ‘dams.Rmd’

SUMMARY: processing the following file failed:
  ‘dams.Rmd’

Error: Vignette re-building failed.
Execution halted
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Dirk", "Eddelbuettel", "with", "contributions", "by", "Brodie"),
                      family = "Gaslam",
                      role = "aut"),
               person(given = "Kevin",
                      family = "Denny",
                      role = "aut"),
               person(given = "Kabira",
                      family = "Namit",
                      role = "aut"),
               person(given = "Colin",
                      family = "Gillespie",
                      role = "aut"),
               person(given = "R",
                      family = "Core",
                      role = "aut"),
               person(given = "Josh",
                      family = "Ulrich",
                      role = "aut"),
               person(given = c("Jordan", "Mark"),
                      family = "Barbone",
                      role = "aut"),
               person(given = "Bill",
                      family = "Dunlap",
                      role = "aut"),
               person(family = "others.",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = "cre",
                      email = "edd@debian.org"))
as necessary.
Maintainer: ‘Matteo Quartagno <m.quartagno@ucl.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matteo",
                    family = "Quartagno",
                    role = c("aut", "cre"),
                    email = "m.quartagno@ucl.ac.uk")
as necessary.

The Description field contains
  et al. (2019) <arXiv:1905.00241>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
DANN_distance.html:54:1 (DANN_distance.Rd:14): Warning: missing </ul> before </div>
MODE.html:48:1 (MODE.Rd:11): Warning: missing </ul> before </div>
class_proportions.html:50:1 (class_proportions.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Valeri Voev <v_voev@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Valeri",
                    family = "Voev",
                    role = c("aut", "cre"),
                    email = "v_voev@yahoo.com")
as necessary.
Maintainer: ‘Dorota Desaulle <dorota.desaulle@u-paris.fr>’

The Description field contains
  <arXiv:2103.09872>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Carlos P. Carmona <perezcarmonacarlos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Carlos", "P."),
                      family = "Carmona",
                      role = c("aut", "cre"),
                      email = "perezcarmonacarlos@gmail.com"),
               person(given = "Meelis",
                      family = "Partel",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
print.darksky.html:51:1 (print.darksky.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
sub-dartR-ANY-ANY-ANY-method.html:77:1 (sub-dartR-ANY-ANY-ANY-method.Rd:26): Warning: missing </ul> before </div>
Found the following HTML validation problems:
sub-dartR-ANY-ANY-ANY-method.html:77:1 (sub-dartR-ANY-ANY-ANY-method.Rd:26): Warning: missing </ul> before </div>
utils.clumpp.html:58:1 (utils.clumpp.Rd:17): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gl.diagnostics.sim.Rd: gl.filter.callrate
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Martijn Schuemie <schuemie@ohdsi.org>’

Found the following (possibly) invalid file URI:
  URI: ../../issues
    From: README.md
Found the following HTML validation problems:
GeneratePswarmVisualization.html:139:1 (GeneratePswarmVisualization.Rd:70): Warning: <h3> anchor "_sec_note" already defined
Maintainer: ‘Xiaorui(Jeremy) Zhu <zhuxiaorui1989@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaorui",
                      family = "Zhu",
                      role = "aut",
                      comment = "Jeremy"),
               person(given = "Xiaorui",
                      family = "Zhu",
                      role = "cre",
                      email = "zhuxiaorui1989@gmail.com",
                      comment = "Jeremy"))
as necessary.
checkRd: (-1) processFlow.Rd:14: Lost braces
    14 | \item{roundDigits}{Integer. If NA, numerics are not rounded before comparison. If /code{roundDigits} is specified, numerics are 
       |                                                                                        ^
checkRd: (-1) processFlow.Rd:15: Lost braces
    15 | rounded to /code{roundDigits} decimal places using \link[base]{round}.}
       |                 ^
Found the following HTML validation problems:
compareNames.html:50:1 (compareNames.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
mode_stat.html:50:1 (mode_stat.Rd:12): Warning: missing </ul> before </div>
checkRd: (-1) data_edit.Rd:137: Lost braces
   137 | code{data_edit} is a shiny application built on \code{rhandsontable} that is
       |     ^
Maintainer: ‘Jonathan M. Gilligan <jonathan.gilligan@vanderbilt.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
action_vec.html:46:1 (action_vec.Rd:10): Warning: missing </ul> before </div>
best_performance.html:46:1 (best_performance.Rd:10): Warning: missing </ul> before </div>
estimation_details.html:46:1 (estimation_details.Rd:10): Warning: missing </ul> before </div>
fitnessCPP.html:66:1 (fitnessCPP.Rd:16): Warning: missing </ul> before </div>
states.html:46:1 (states.Rd:10): Warning: missing </ul> before </div>
varImp.html:46:1 (varImp.Rd:10): Warning: missing </ul> before </div>
File ‘DataGraph/libs/DataGraph.so’:
  Found non-API call to R: ‘Rf_isFrame’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Srivenkatesh Gandhi <srivenkateshg@sase.ssn.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Srivenkatesh",
                      family = "Gandhi",
                      role = c("aut", "cre"),
                      email = "srivenkateshg@sase.ssn.edu.in"),
               person(given = c("Kreshnaa", "Raam", "S"),
                      family = "Bethusamy",
                      role = "aut",
                      email = "kreshnaaraamsb@sase.ssn.edu.in"))
as necessary.
Found the following HTML validation problems:
basicVisualCFLB.html:55:1 (basicVisualCFLB.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Dania M. Rodriguez <dmrodz@gmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘my.data.Rd’:
    http://doi.org/10.5281/zenodo.439543
Found the following files/directories:
  ‘my new data set.rds’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dataone-defunct.Rd: getData, getIdentifier, getFormatId,
    setPublicAccess, canRead, addData
  setPublicAccess.Rd: DataObject-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
D1Node-initialize.html:47:1 (D1Node-initialize.Rd:11): Warning: missing </ul> before </div>
EMLParser.html:53:1 (EMLParser.Rd:15): Warning: missing </ul> before </div>
asDataFrame.html:63:1 (asDataFrame.Rd:20): Warning: missing </ul> before </div>
d1_errors.html:48:1 (d1_errors.Rd:11): Warning: missing </ul> before </div>
downloadCert.html:59:1 (downloadCert.Rd:15): Warning: missing </ul> before </div>
getData.html:47:1 (getData.Rd:10): Warning: missing </ul> before </div>
showAuth.html:57:1 (showAuth.Rd:17): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dp_set_max_rows.html:46:1 (dp_set_max_rows.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
set_as_numeric_matrix.html:68:1 (set_as_numeric_matrix.Rd:23): Warning: missing </ul> before </div>
Maintainer: ‘Chun-Sheng Liang <liangchunsheng@lzu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chun-Sheng",
                      family = "Liang",
                      role = c("aut", "cre"),
                      email = "liangchunsheng@lzu.edu.cn"),
               person(given = "Hao",
                      family = "Wu",
                      role = "aut"),
               person(given = "Hai-Yan",
                      family = "Li",
                      role = "aut"),
               person(given = "Qiang",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Zhanqing",
                      family = "Li",
                      role = "aut"),
               person(given = "Ke-Bin",
                      family = "He",
                      role = "aut"),
               person(given = "Lanzhou",
                      family = "University",
                      role = "aut"),
               person(given = "Tsinghua",
                      family = "University",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
dot-util_internal_normalize_meta_data.html:61:1 (dot-util_internal_normalize_meta_data.Rd:20): Warning: missing </ul> before </div>
util_ds1_eval_env.html:60:1 (util_ds1_eval_env.Rd:19): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘drwho_directors.Rd’ ‘drwho_episodes.Rd’ ‘drwho_writers.Rd’
    ‘torchwood_directors.Rd’ ‘torchwood_episodes.Rd’
    ‘torchwood_writers.Rd’
Found the following HTML validation problems:
basicVisualCFLB.html:55:1 (basicVisualCFLB.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
getQuerySummary.html:46:1 (getQuerySummary.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Christoph Sax <christoph.sax@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christoph",
                    family = "Sax",
                    role = c("aut", "cre"),
                    email = "christoph.sax@gmail.com")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/christophsax/dataseries
which should likely be
  https://github.com/christophsax/dataseries/issues
instead.
Found the following HTML validation problems:
iris_items.html:62:1 (iris_items.Rd:18): Warning: missing </ul> before </div>
schema_1_1_0.html:48:1 (schema_1_1_0.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Paolo Giordani <paolo.giordani@uniroma1.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paolo",
                      family = "Giordani",
                      role = c("aut", "cre"),
                      email = "paolo.giordani@uniroma1.it"),
               person(given = c("Maria", "Brigida"),
                      family = "Ferraro",
                      role = "aut"),
               person(given = "Francesca",
                      family = "Martella",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
alldata.html:58:1 (alldata.Rd:16): Warning: missing </ul> before </div>
browseDatasets.html:63:1 (browseDatasets.Rd:21): Warning: missing </ul> before </div>
datasets.html:58:1 (datasets.Rd:16): Warning: missing </ul> before </div>
getDatasetInfo.html:63:1 (getDatasetInfo.Rd:21): Warning: missing </ul> before </div>
print.browseDatasets.html:51:1 (print.browseDatasets.Rd:12): Warning: missing </ul> before </div>
print.datasets.html:51:1 (print.datasets.Rd:12): Warning: missing </ul> before </div>
printDatasets.html:63:1 (printDatasets.Rd:21): Warning: missing </ul> before </div>
promptDatasets.html:63:1 (promptDatasets.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as_jsonld.html:71:1 (as_jsonld.Rd:27): Warning: missing </ul> before </div>
crosswalk_Organization.html:46:1 (crosswalk_Organization.Rd:10): Warning: missing </ul> before </div>
crosswalk_Person.html:48:1 (crosswalk_Person.Rd:11): Warning: missing </ul> before </div>
crosswalk_creator.html:46:1 (crosswalk_creator.Rd:10): Warning: missing </ul> before </div>
crosswalk_distribution.html:46:1 (crosswalk_distribution.Rd:10): Warning: missing </ul> before </div>
es_access.html:50:1 (es_access.Rd:12): Warning: missing </ul> before </div>
es_attributes.html:50:1 (es_attributes.Rd:12): Warning: missing </ul> before </div>
es_biblio.html:50:1 (es_biblio.Rd:12): Warning: missing </ul> before </div>
es_creators.html:50:1 (es_creators.Rd:12): Warning: missing </ul> before </div>
write_jsonld.html:74:1 (write_jsonld.Rd:28): Warning: missing </ul> before </div>
Maintainer: ‘Svetlana Saarela <admin@svetlanasaarela.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Svetlana",
                      family = "Saarela",
                      role = c("aut", "cre"),
                      email = "admin@svetlanasaarela.com"),
               person(given = "Anton",
                      family = "Grafström",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘datassim.Rd’:
    https://doi.org/10.20944/preprints201710.0098.v1
Found the following HTML validation problems:
cbindRobust.html:52:1 (cbindRobust.Rd:12): Warning: missing </ul> before </div>
File ‘data.table/libs/data_table.so’:
  Found non-API calls to R: ‘OBJECT’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
    ‘SET_TRUELENGTH’, ‘TRUELENGTH’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
add_results.html:52:1 (add_results.Rd:12): Warning: missing </ul> before </div>
convert_error_df.html:46:1 (convert_error_df.Rd:10): Warning: missing </ul> before </div>
get_assert_method.html:53:1 (get_assert_method.Rd:15): Warning: missing </ul> before </div>
get_results.html:81:1 (get_results.Rd:13): Warning: missing </ul> before </div>
render_raw_report_ui.html:64:1 (render_raw_report_ui.Rd:21): Warning: missing </ul> before </div>
render_semantic_report_ui.html:69:1 (render_semantic_report_ui.Rd:25): Warning: missing </ul> before </div>
save_report.html:79:1 (save_report.Rd:33): Warning: missing </ul> before </div>
save_results.html:61:1 (save_results.Rd:19): Warning: missing </ul> before </div>
save_summary.html:68:1 (save_summary.Rd:24): Warning: missing </ul> before </div>
validate.html:57:1 (validate.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dataverifyr_plus.html:62:1 (dataverifyr_plus.Rd:19): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-is_deprecated.html:52:1 (dot-is_deprecated.Rd:13): Warning: missing </ul> before </div>
visualisation_recipe.html:69:1 (visualisation_recipe.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Ryota Suzuki <suzuki@ef-prime.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ryota",
                    family = "Suzuki",
                    role = c("aut", "cre"),
                    email = "suzuki@ef-prime.com")
as necessary.
Found the following HTML validation problems:
checkMaxSpan.html:48:1 (checkMaxSpan.Rd:11): Warning: missing </ul> before </div>
checkRanges.html:48:1 (checkRanges.Rd:11): Warning: missing </ul> before </div>
filterEMPTY.html:48:1 (filterEMPTY.Rd:11): Warning: missing </ul> before </div>
makeInput.html:68:1 (makeInput.Rd:21): Warning: missing </ul> before </div>
makeLabel.html:52:1 (makeLabel.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Tim Bergsma <bergsmat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tim",
                    family = "Bergsma",
                    role = c("aut", "cre"),
                    email = "bergsmat@gmail.com")
as necessary.
Maintainer: ‘Chris Hartgerink <chris@libscie.org>’

Found the following (possibly) invalid file URI:
  URI: CODE_OF_CONDUCT.md
    From: README.md
Found the following HTML validation problems:
cmd_check.html:46:1 (cmd_check.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Rolf Turner <r.turner@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rolf",
                    family = "Turner",
                    role = c("aut", "cre"),
                    email = "r.turner@auckland.ac.nz")
as necessary.
checkRd: (-1) plot.mleBb.Rd:48: Lost braces
    48 |   \ code{size} is extracted from argument \code{x}.
       |         ^
Maintainer: ‘Shaofeng Zhang <shaofeng.zhang@wmich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Joseph", "W."),
                      family = "McKean",
                      role = "aut"),
               person(given = "Shaofeng",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "shaofeng.zhang@wmich.edu"))
as necessary.
checkRd: (-1) value_missing_table.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) value_missing_table.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Gabriel Budel <gabysp_budel@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gabriel",
                      family = "Budel",
                      role = c("aut", "cre"),
                      email = "gabysp_budel@hotmail.com"),
               person(given = "Flavius",
                      family = "Frasincar",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
hidden_aliases.html:273:1 (hidden_aliases.Rd:330): Warning: missing </ul> before </div>
Maintainer: ‘Nailong Zhang <setseed2016@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nailong",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "setseed2016@gmail.com")
as necessary.
Maintainer: ‘The Tien Mai <t.t.mai@medisin.uio.no>’

The Description field contains
  <arXiv:2103.11749>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) CI_mc.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{i}{the row index of the interest entry X_{i,j}}
       |                                                ^
checkRd: (-1) CI_mc.Rd:12: Lost braces; missing escapes or markup?
    12 | \item{j}{the row index of the interest entry X_{i,j}}
       |                                                ^
Maintainer: ‘Scott H. Koeneman <Scott.Koeneman@jefferson.edu>’

The Description field contains
  more information, see Koeneman and Cavanaugh (2023) <arXiv:2309.10614>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
plot.dbn.html:52:1 (plot.dbn.Rd:12): Warning: missing </ul> before </div>
plot.dbn.fit.html:52:1 (plot.dbn.fit.Rd:12): Warning: missing </ul> before </div>
print.dbn.html:51:1 (print.dbn.Rd:12): Warning: missing </ul> before </div>
print.dbn.fit.html:51:1 (print.dbn.fit.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
do.tbl_sql.html:61:1 (do.tbl_sql.Rd:20): Warning: missing </ul> before </div>
intersect.tbl_lazy.html:78:1 (intersect.tbl_lazy.Rd:33): Warning: missing </ul> before </div>
nycflights13.html:58:1 (nycflights13.Rd:22): Warning: missing </ul> before </div>
sql.html:62:1 (sql.Rd:22): Warning: missing </ul> before </div>
sql_query_insert.html:196:1 (sql_query_insert.Rd:136): Warning: <h4> anchor "+E2+80+98+22on_conflict+22+E2+80+99" already defined
src_sql.html:56:1 (src_sql.Rd:16): Warning: missing </ul> before </div>
tbl_sql.html:63:1 (tbl_sql.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Timothy Conwell <timconwell@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Timothy",
                    family = "Conwell",
                    role = c("aut", "cre"),
                    email = "timconwell@gmail.com")
as necessary.
Maintainer: ‘Gokmen Altay <altaylabs@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gokmen",
                    family = "Altay",
                    role = c("aut", "cre"),
                    email = "altaylabs@gmail.com")
as necessary.
Maintainer: ‘Taiane Schaedler Prass <taianeprass@gmail.com>’

The Description field contains
  <arXiv:1910.10589>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
summary.turnbull.html:68:1 (summary.turnbull.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Jonathan Berrisch <Jonathan@Berrisch.biz>’

The Description field contains
  distance correlation (see Chaudhuri, Hu (2019) <arXiv:1810.11332>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) data.Rd:11: Lost braces
    11 | \doi{10.1007/s40258-021-00647-3}{DOI}
       |                                 ^
Maintainer: ‘Sharma Parichit <parishar@iu.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following HTML validation problems:
calculate_dci_dia_thresh.html:93:1 (calculate_dci_dia_thresh.Rd:43): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as_igraph.html:50:1 (as_igraph.Rd:12): Warning: missing </ul> before </div>
as_lineage_tree.html:58:1 (as_lineage_tree.Rd:16): Warning: missing </ul> before </div>
as_phylo.html:50:1 (as_phylo.Rd:12): Warning: missing </ul> before </div>
dist_replacement.html:58:1 (dist_replacement.Rd:16): Warning: missing </ul> before </div>
dist_weighted_hamming.html:54:1 (dist_weighted_hamming.Rd:14): Warning: missing </ul> before </div>
downsample.html:50:1 (downsample.Rd:12): Warning: missing </ul> before </div>
get_leaves.html:50:1 (get_leaves.Rd:12): Warning: missing </ul> before </div>
process_sequence.html:50:1 (process_sequence.Rd:12): Warning: missing </ul> before </div>
prune.html:50:1 (prune.Rd:12): Warning: missing </ul> before </div>
simulate.html:54:1 (simulate.Rd:14): Warning: missing </ul> before </div>
substr_kmer.html:50:1 (substr_kmer.Rd:12): Warning: missing </ul> before </div>
subtract.html:54:1 (subtract.Rd:14): Warning: missing </ul> before </div>
subtree.html:50:1 (subtree.Rd:12): Warning: missing </ul> before </div>
summarize_kmer.html:50:1 (summarize_kmer.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Maria Dolores Martinez-Miranda <mmiranda@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Maria", "Dolores"),
                      family = "Martinez-Miranda",
                      role = c("aut", "cre"),
                      email = "mmiranda@ugr.es"),
               person(given = c("Jens", "Perch"),
                      family = "Nielsen",
                      role = "aut"),
               person(given = "Richard",
                      family = "Verrall",
                      role = "aut"))
as necessary.
Maintainer: ‘Virgilio Gómez-Rubio <Virgilio.Gomez@uclm.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Virgilio",
                      family = "Gómez-Rubio",
                      role = c("aut", "cre"),
                      email = "virgilio.gomez@uclm.es"),
               person(given = "Juan",
                      family = "Ferrándiz-Ferragud",
                      role = "aut"),
               person(given = "Antonio",
                      family = "López-Quílez",
                      role = "aut"),
               person(given = c("with", "contributions", "by", "Roger"),
                      family = "Bivand.",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
pkg-internal.html:76:1 (pkg-internal.Rd:28): Warning: missing </ul> before </div>
Found the following HTML validation problems:
modify_so.html:50:1 (modify_so.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Dominic Edelmann <dominic.edelmann@dkfz-heidelberg.de>’

The Description field contains
  <arXiv:1808.07280>. Distance standard deviation methods (Edelmann, et
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dcortools.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Hang Weiqiang <e0010758@u.nus.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hang",
                    family = "Weiqiang",
                    role = c("aut", "cre"),
                    email = "e0010758@u.nus.edu")
as necessary.
Maintainer: ‘Oğuzhan Öğreden <oguzhan@oguzhanogreden.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Oğuzhan",
                    family = "Öğreden",
                    role = c("aut", "cre"),
                    email = "oguzhan@oguzhanogreden.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dcurver.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
test_consequences.html:88:1 (test_consequences.Rd:45): Warning: <h3> anchor "statistics" already defined
Found the following HTML validation problems:
dd_multiple_KI_loglik.html:138:1 (dd_multiple_KI_loglik.Rd:86): Warning: missing </ul> before </div>
Found the following HTML validation problems:
GU_normalization_get_coefficients.html:52:1 (GU_normalization_get_coefficients.Rd:12): Warning: missing </ul> before </div>
GU_normalization_get_vcov.html:51:1 (GU_normalization_get_vcov.Rd:12): Warning: missing </ul> before </div>
GU_normalization_sum_coefficients.html:51:1 (GU_normalization_sum_coefficients.Rd:12): Warning: missing </ul> before </div>
GU_normalization_sum_vcov.html:51:1 (GU_normalization_sum_vcov.Rd:12): Warning: missing </ul> before </div>
bootstrap_estimate_ob_decompose.html:144:1 (bootstrap_estimate_ob_decompose.Rd:75): Warning: missing </ul> before </div>
dfl_decompose_bootstrap.html:123:1 (dfl_decompose_bootstrap.Rd:60): Warning: missing </ul> before </div>
dfl_decompose_estimate.html:143:1 (dfl_decompose_estimate.Rd:73): Warning: missing </ul> before </div>
estimate_ob_decompose.html:114:1 (estimate_ob_decompose.Rd:52): Warning: missing </ul> before </div>
fit_and_predict_probabilities.html:81:1 (fit_and_predict_probabilities.Rd:32): Warning: missing </ul> before </div>
get_distributional_statistics.html:84:1 (get_distributional_statistics.Rd:33): Warning: missing </ul> before </div>
ob_decompose_calculate_terms.html:80:1 (ob_decompose_calculate_terms.Rd:30): Warning: missing </ul> before </div>
select_observations_to_be_trimmed.html:67:1 (select_observations_to_be_trimmed.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

The Description field contains
  Debiased Lasso method was proposed in <arXiv:2004.03758>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
print.summary.DDL.html:51:1 (print.summary.DDL.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Tim Riffe <riffe@demogr.mpg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tim",
                      family = "Riffe",
                      role = c("aut", "cre"),
                      email = "riffe@demogr.mpg.de"),
               person(given = "Everton",
                      family = "Lima",
                      role = "aut"),
               person(given = "Bernardo",
                      family = "Queiroz",
                      role = "aut"))
as necessary.
checkRd: (-1) detectAgeInterval.Rd:10: Lost braces
    10 | \item{Dat}{a \code{data.frame} containing a column called \code{Age}, or code{age}.}
       |                                                                              ^
checkRd: (-1) detectSex.Rd:10: Lost braces
    10 | \item{Dat}{a \code{data.frame} containing a column called \code{Sex}, or code{sex}.}
       |                                                                              ^
checkRd: (-1) ggbgetAgesFit.Rd:28: Lost braces
    28 | code{\link{ggbChooseAges}}
       |     ^
Found the following HTML validation problems:
assignNoteCode.html:50:1 (assignNoteCode.Rd:12): Warning: missing </ul> before </div>
ypart.html:67:1 (ypart.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Fan Yang <fyang1@uchicago.edu>’

The Description field contains
  <arXiv:1906.00051>) by decomposing a large covariance matrix into a
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) plot.ddpcr_plate.Rd:136-137: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ddpcr_plate.Rd:138-139: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ddpcr_plate.Rd:140-141: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
plant_growth.html:113:1 (plant_growth.Rd:51): Warning: missing </ul> before </div>
Maintainer: ‘Xiaojie Qiu <xqiu@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaojie",
                      family = "Qiu",
                      role = c("aut", "cre"),
                      email = "xqiu@uw.edu"),
               person(given = "Cole",
                      family = "Trapnell",
                      role = "aut"),
               person(given = "Qi",
                      family = "Mao",
                      role = "aut"),
               person(given = "Li",
                      family = "Wang",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
get_major_eigenvalue.html:50:1 (get_major_eigenvalue.Rd:12): Warning: missing </ul> before </div>
pca_projection_R.html:50:1 (pca_projection_R.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Hadrien Lorenzo <hadrien.lorenzo.2015@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hadrien",
                    family = "Lorenzo",
                    role = c("aut", "cre"),
                    email = "hadrien.lorenzo.2015@gmail.com")
as necessary.
Found the following HTML validation problems:
bootstrap_Rcpp.html:114:1 (bootstrap_Rcpp.Rd:51): Warning: missing </ul> before </div>
modelddsPLSCpp_Rcpp.html:82:1 (modelddsPLSCpp_Rcpp.Rd:28): Warning: missing </ul> before </div>
Maintainer: ‘Przemyslaw Biecek <przemyslaw.biecek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Przemyslaw",
                      family = "Biecek",
                      role = c("aut", "cre"),
                      email = "przemyslaw.biecek@gmail.com",
                      comment = "R code"),
               person(given = "Teresa",
                      family = "Ledwina",
                      role = "aut",
                      comment = "support,\n    descriptions"))
as necessary.
Maintainer: ‘Mengbing Li <mengbing@umich.edu>’

The Description field contains
  <arXiv:2306.04700>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
H_n.html:46:1 (H_n.Rd:10): Warning: missing </ul> before </div>
J_n.html:50:1 (J_n.Rd:12): Warning: missing </ul> before </div>
draw_mnorm.html:53:1 (draw_mnorm.Rd:14): Warning: missing </ul> before </div>
quiet.html:50:1 (quiet.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Nunzio Torrisi <nunzio.torrisi@ieee.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nunzio",
                    family = "Torrisi",
                    role = c("aut", "cre"),
                    email = "nunzio.torrisi@ieee.org")
as necessary.
Maintainer: ‘Claus Dethlefsen <rpackage.deal@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Susanne", "Gammelgaard"),
                      family = "Bottcher",
                      role = "aut"),
               person(given = "Claus",
                      family = "Dethlefsen.",
                      role = "aut"),
               person(given = "Claus",
                      family = "Dethlefsen",
                      role = "cre",
                      email = "rpackage.deal@gmail.com"))
as necessary.
Maintainer: ‘Cameron M. Nugent <camnugent@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Cameron", "M."),
                    family = "Nugent",
                    role = c("aut", "cre"),
                    email = "camnugent@gmail.com")
as necessary.
Found the following HTML validation problems:
dir_check.html:48:1 (dir_check.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Brendan Matthew Galdo <Brendan.m.galdo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/bmgaldo/DEBBI
which should likely be
  https://github.com/bmgaldo/DEBBI/issues
instead.
Maintainer: ‘Hong Zhang <hzhang@wpi.edu>’

The Description field contains
  <arXiv:2401.00540>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yikun Zhang <yikunzhang@foxmail.com>’

The Description field contains
  Giessing, and Chen (2023) <arXiv:2309.06429>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Philipp H Boersch-Supan <pboesu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
is.debinfer_parlist.html:46:1 (is.debinfer_parlist.Rd:10): Warning: missing </ul> before </div>
is.debinfer_result.html:46:1 (is.debinfer_result.Rd:10): Warning: missing </ul> before </div>
log_post_params.html:70:1 (log_post_params.Rd:22): Warning: missing </ul> before </div>
log_prior_params.html:58:1 (log_prior_params.Rd:16): Warning: missing </ul> before </div>
pairs.debinfer_result.html:67:1 (pairs.debinfer_result.Rd:20): Warning: missing </ul> before </div>
plot.post_sim_list.html:79:1 (plot.post_sim_list.Rd:30): Warning: missing </ul> before </div>
post_prior_densplot.html:73:1 (post_prior_densplot.Rd:27): Warning: missing </ul> before </div>
prior_draw_rev.html:54:1 (prior_draw_rev.Rd:14): Warning: missing </ul> before </div>
propose_single_rev.html:50:1 (propose_single_rev.Rd:12): Warning: missing </ul> before </div>
reshape_post_sim.html:46:1 (reshape_post_sim.Rd:10): Warning: missing </ul> before </div>
update_sample_rev.html:158:1 (update_sample_rev.Rd:78): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print.DeBoinR.html:44:1 (print.DeBoinR.Rd:9): Warning: missing </ul> before </div>
Specified C++14: please drop specification unless essential
Maintainer: ‘Christiana Kartsonaki <christiana.kartsonaki@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christiana",
                    family = "Kartsonaki",
                    role = c("aut", "cre"),
                    email = "christiana.kartsonaki@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Partha Sarathi Bishnu <psbishnu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Partha", "Sarathi"),
                    family = "Bishnu",
                    role = c("aut", "cre"),
                    email = "psbishnu@gmail.com")
as necessary.
Found the following HTML validation problems:
corMat-set.html:50:1 (corMat-set.Rd:12): Warning: missing </ul> before </div>
corMat.html:46:1 (corMat.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
add_basemap.html:54:1 (add_basemap.Rd:14): Warning: missing </ul> before </div>
add_data.html:54:1 (add_data.Rd:14): Warning: missing </ul> before </div>
add_json_editor.html:60:1 (add_json_editor.Rd:18): Warning: missing </ul> before </div>
add_legend.html:79:1 (add_legend.Rd:31): Warning: missing </ul> before </div>
add_source_as_dep.html:54:1 (add_source_as_dep.Rd:14): Warning: missing </ul> before </div>
deckgl-shiny.html:68:1 (deckgl-shiny.Rd:25): Warning: missing </ul> before </div>
deckgl_proxy.html:52:1 (deckgl_proxy.Rd:14): Warning: missing </ul> before </div>
does_it_work.html:46:1 (does_it_work.Rd:10): Warning: missing </ul> before </div>
get_data.html:46:1 (get_data.Rd:10): Warning: missing </ul> before </div>
set_view_state.html:73:1 (set_view_state.Rd:27): Warning: missing </ul> before </div>
use_carto_style.html:46:1 (use_carto_style.Rd:10): Warning: missing </ul> before </div>
use_contour_definition.html:58:1 (use_contour_definition.Rd:18): Warning: missing </ul> before </div>
use_default_icon_properties.html:63:1 (use_default_icon_properties.Rd:22): Warning: missing </ul> before </div>
use_icon_definition.html:80:1 (use_icon_definition.Rd:32): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cite_design.html:50:1 (cite_design.Rd:12): Warning: missing </ul> before </div>
declare_internal_inherit_params.html:58:1 (declare_internal_inherit_params.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
openFileToWrite.html:47:1 (openFileToWrite.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
decode.html:122:1 (decode.Rd:73): Warning: <h3> anchor "extra_functions" already defined
extra_functions.html:54:1 (extra_functions.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Neeraj Bokde <neerajdhanraj@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Neeraj",
                    family = "Bokde",
                    role = c("aut", "cre"),
                    email = "neerajdhanraj@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) deconv.Rd:85: Lost braces; missing escapes or markup?
    85 |     \code{tg}, std. error of \eqn{g}, \eqn{G} (the cdf of {g}),
       |                                                           ^
Maintainer: ‘Matthias Bogaert <Matthias.Bogaert@UGent.Be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthias",
                    family = "Bogaert",
                    role = c("aut", "cre"),
                    email = "matthias.bogaert@ugent.be")
as necessary.
Found the following HTML validation problems:
plot.decp_result.html:51:1 (plot.decp_result.Rd:12): Warning: missing </ul> before </div>
plot.mle_change_point_result.html:51:1 (plot.mle_change_point_result.Rd:12): Warning: missing </ul> before </div>
print.decp_result.html:51:1 (print.decp_result.Rd:12): Warning: missing </ul> before </div>
print.mle_change_point_result.html:51:1 (print.mle_change_point_result.Rd:12): Warning: missing </ul> before </div>
summary.decp_result.html:51:1 (summary.decp_result.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
deducer.html:48:1 (deducer.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Mark van der Loo <mark.vanderloo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mark",
                      family = "van der Loo",
                      role = c("aut", "cre"),
                      email = "mark.vanderloo@gmail.com"),
               person(given = "Edwin",
                      family = "de Jonge",
                      role = "aut"),
               person(given = "Sander",
                      family = "Scholtus",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
DR.html:48:1 (DR.Rd:11): Warning: missing </ul> before </div>
DR_SVC.html:46:1 (DR_SVC.Rd:10): Warning: missing </ul> before </div>
DR_boxplot.html:46:1 (DR_boxplot.Rd:10): Warning: missing </ul> before </div>
DR_plot.html:46:1 (DR_plot.Rd:10): Warning: missing </ul> before </div>
DR_stats.html:46:1 (DR_stats.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Suren Rathnayake <surenr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cinzia",
                      family = "Viroli",
                      role = "aut"),
               person(given = c("Geoffrey", "J."),
                      family = "McLachlan",
                      role = "aut"),
               person(given = "Suren",
                      family = "Rathnayake",
                      role = "cre",
                      email = "surenr@gmail.com"))
as necessary.
Maintainer: ‘Xiao Rong <runxiao@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiao",
                    family = "Rong",
                    role = c("aut", "cre"),
                    email = "runxiao@gmail.com")
as necessary.
checkRd: (-1) deepNN-package.Rd:18: Lost braces
    18 | section{Dependencies}{
       |        ^
checkRd: (-1) deepNN-package.Rd:18-21: Lost braces
    18 | section{Dependencies}{
       |                      ^
checkRd: (-1) deepNN-package.Rd:23: Lost braces
    23 | section{Citation}{
       |        ^
checkRd: (-1) deepNN-package.Rd:23-25: Lost braces
    23 | section{Citation}{
       |                  ^
checkRd: (-1) deepNN-package.Rd:27-38: Lost braces
    27 | references{
       |           ^
Maintainer: ‘Brian <bleemayer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Brian", "Lee"),
                      family = "Mayer",
                      role = "aut"),
               person(family = "Brian",
                      role = "cre",
                      email = "bleemayer@gmail.com"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘deeptrafo.Rd’ ‘ensembles.R’ ‘methods.R’
Found the following HTML validation problems:
plot.deeptrafo.html:95:1 (plot.deeptrafo.Rd:42): Warning: missing </ul> before </div>
Maintainer: ‘Javaria Ahmad Khan <jakhan0@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javaria", "Ahmad"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "jakhan0@yahoo.com"),
               person(given = "Atif",
                      family = "Akbar.",
                      role = "aut"))
as necessary.
Maintainer: ‘Nick Golding <nick.golding.research@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Golding",
                    role = c("aut", "cre"),
                    email = "nick.golding.research@gmail.com")
as necessary.
Maintainer: ‘Toshihiro Umehara <toshi@niceume.com>’

The BugReports field in DESCRIPTION has
  https://github.com/niceume/defineOptions
which should likely be
  https://github.com/niceume/defineOptions/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘defineOptions-package.Rd’ ‘define_option.Rd’ ‘parse_with_defs.Rd’
    ‘summary.parsed_result.Rd’
Specified C++11: please drop specification unless essential
Maintainer: ‘Philippe Lambert <p.lambert@uliege.be>’

The Description field contains
  (2021) <arXiv:2107.03883> for details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘api.R’ ‘category_blur.R’ ‘deident.R’
Found the following HTML validation problems:
apply_deident.html:54:1 (apply_deident.Rd:14): Warning: missing </ul> before </div>
apply_to_data_frame.html:54:1 (apply_to_data_frame.Rd:14): Warning: missing </ul> before </div>
category_blur.html:50:1 (category_blur.Rd:12): Warning: missing </ul> before </div>
create_deident.html:51:1 (create_deident.Rd:13): Warning: missing </ul> before </div>
deident_job_from_folder.html:58:1 (deident_job_from_folder.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
summary.SingleSim.object.html:66:1 (summary.SingleSim.object.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Bill Wheeler <wheelerb@imsweb.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhenzhen",
                      family = "Xu",
                      role = "aut",
                      email = "Zhenzhen.Xu@fda.hhs.gov"),
               person(given = "Boguang",
                      family = "Zhen",
                      role = "aut",
                      email = "Boguang.Zhen@fda.hhs.gov"),
               person(given = "Yongsoek",
                      family = "Park",
                      role = "aut",
                      email = "yongpark@pitt.edu"),
               person(given = "Bin",
                      family = "Zhu",
                      role = "aut",
                      email = "bin.zhu@nih.gov"),
               person(given = "Bill",
                      family = "Wheeler",
                      role = "cre",
                      email = "wheelerb@imsweb.com"))
as necessary.
Found the following HTML validation problems:
eval_delayed.html:50:1 (eval_delayed.Rd:12): Warning: missing </ul> before </div>
make_graph.html:54:1 (make_graph.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Rolf Turner <rolfturner@posteo.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rolf",
                    family = "Turner",
                    role = c("aut", "cre"),
                    email = "rolfturner@posteo.net")
as necessary.
Maintainer: ‘David Magis <david.magis@ulg.ac.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Magis",
                      role = c("aut", "cre"),
                      email = "david.magis@ulg.ac.be",
                      comment = "U Liege"),
               person(given = "Bruno",
                      family = "Facon",
                      role = "aut",
                      comment = "Univ Lille-Nord de France"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) deltaPlot.Rd:28: Lost braces
    28 |  \item{purify}{logical: should item purification be performed? (Default is code{FALSE}). See \bold{Details}.}
       |                                                                                ^
Found the following files/directories:
  ‘res.pdf’ ‘res1.jpg’
Maintainer: ‘Javaria Ahmad Khan <jakhan0@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javaria", "Ahmad"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "jakhan0@yahoo.com"),
               person(given = "Atif",
                      family = "Akbar.",
                      role = "aut"))
as necessary.
Maintainer: ‘Terry Therneau <therneau.terry@mayo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Terry",
                    family = "Therneau",
                    role = c("aut", "cre"),
                    email = "therneau.terry@mayo.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Caswell.R’
Found the following files/directories:
  ‘smd_table.docx’
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("James", "Holland"),
                      family = "Jones",
                      role = "aut",
                      email = "jhj1@stanford.edu"),
               person(given = "Jim",
                      family = "Oeppen",
                      role = "ctb"),
               person(given = "Hana",
                      family = "Sevcikova",
                      role = "cre",
                      email = "hanas@uw.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
checkRd: (-1) kin.Rd:49-50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:51-52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:53-61: Lost braces
    53 | {\itemize{
       | ^
checkRd: (-1) kin.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:56-57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:59-67: Lost braces
    59 | {\itemize{
       | ^
checkRd: (-1) kin2sex.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Vinca Prana <vinca.prana@free.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vinca",
                    family = "Prana",
                    role = c("aut", "cre"),
                    email = "vinca.prana@free.fr")
as necessary.
checkRd: (-1) scramb.Rd:44: Escaped LaTeX specials: \&
Found the following HTML validation problems:
assignTax_as_char.html:48:1 (assignTax_as_char.Rd:11): Warning: missing </ul> before </div>
assign_taxonomyDada2.html:59:1 (assign_taxonomyDada2.Rd:19): Warning: missing </ul> before </div>
format_abund_matrix.html:60:1 (format_abund_matrix.Rd:20): Warning: missing </ul> before </div>
get_fastq_paths.html:54:1 (get_fastq_paths.Rd:14): Warning: missing </ul> before </div>
get_read_counts.html:51:1 (get_read_counts.Rd:15): Warning: missing </ul> before </div>
infer_asv_command.html:56:1 (infer_asv_command.Rd:18): Warning: missing </ul> before </div>
prep_abund_matrix.html:50:1 (prep_abund_matrix.Rd:12): Warning: missing </ul> before </div>
process_single_barcode.html:57:1 (process_single_barcode.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}
Found the following HTML validation problems:
basalContribution.html:47:1 (basalContribution.Rd:10): Warning: missing </ul> before </div>
densityRegen.html:72:1 (densityRegen.Rd:25): Warning: missing </ul> before </div>
print.angle.html:51:1 (print.angle.Rd:12): Warning: missing </ul> before </div>
print.slope.html:51:1 (print.slope.Rd:12): Warning: missing </ul> before </div>
rfreq.html:46:1 (rfreq.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Catherine Hurley <catherine.hurley@mu.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Catherine", "B."),
                      family = "Hurley",
                      role = "aut"),
               person(given = "Denise",
                      family = "Earle",
                      role = "aut"),
               person(given = "Catherine",
                      family = "Hurley",
                      role = "cre",
                      email = "catherine.hurley@mu.ie"))
as necessary.
checkRd: (-1) DendSer.Rd:50: Escaped LaTeX specials: \&
'library' or 'require' calls not declared from:
  ‘HSAUR2’ ‘Iyer517’ ‘PairViz’ ‘RColorBrewer’ ‘mvtnorm’ ‘scagnostics’
Found the following HTML validation problems:
convert_slwer_to_tidy.html:78:1 (convert_slwer_to_tidy.Rd:30): Warning: missing </ul> before </div>
convert_srilanka_wer_to_tidy.html:83:1 (convert_srilanka_wer_to_tidy.Rd:33): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.denim.html:67:1 (plot.denim.Rd:20): Warning: missing </ul> before </div>
Maintainer: ‘James Ware <j.ware@imperial.ac.uk>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘fmrpGenes.Rd’:
    http://dx.doi.org/10.1016/j.cell.2011.06.013
Found the following HTML validation problems:
viewProbabilityTable.html:46:1 (viewProbabilityTable.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Matt P. Wand <matt.wand@uts.edu.au>’

The Description field contains
  methodology is described in Wand and Yu (2020) <arXiv:2009.06182>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Running ‘testthat.R’ [167s/50s]
Running R code in ‘testthat.R’ had CPU time 3.3 times elapsed time
Found the following HTML validation problems:
distance.html:52:1 (distance.Rd:14): Warning: missing </ul> before </div>
kernel_gaussian.html:44:1 (kernel_gaussian.Rd:9): Warning: missing </ul> before </div>
Maintainer: ‘Yikai Wang <johnzon.wyk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yikai",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "johnzon.wyk@gmail.com"),
               person(given = "Jian",
                      family = "Kang",
                      role = "aut"),
               person(given = c("Phebe", "Brenne"),
                      family = "Kemmer",
                      role = "aut"),
               person(given = "Ying",
                      family = "Guo",
                      role = "aut"))
as necessary.
Maintainer: ‘Carl A. B. Pearson <carl.pearson@lshtm.ac.uk>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘denvax.Rd’:
    https://doi.org/10.1098/rsif.2019.0234
  File ‘lazou2016.Rd’:
    https://doi.org/10.1056/NEJMoa1503877
  File ‘morrison2010.Rd’:
    https://doi.org/10.1371/journal.pntd.0000670
  File ‘nPxA.Rd’:
    https://doi.org/10.1098/rsif.2019.0234
Maintainer: ‘Katharine Mullen <mullenkate@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Eckhard Liebscher <eckhard.liebscher@hs-merseburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Eckhard",
                    family = "Liebscher",
                    role = c("aut", "cre"),
                    email = "eckhard.liebscher@hs-merseburg.de")
as necessary.
Maintainer: ‘Takeshi Emura <takeshiemura@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Takeshi",
                    family = "Emura",
                    role = c("aut", "cre"),
                    email = "takeshiemura@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  start_bot_for_chat.Rd: telegram.bot
  use_ui.Rd: ui_line, ui_todo, ui_done, ui_oops, ui_info,
    ui_code_block, ui_stop, ui_warn, ui_yeah, ui_nope, ui_field,
    ui_value, ui_path, ui_code
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
crs.html:68:1 (crs.Rd:30): Warning: missing </ul> before </div>
dyn.html:50:1 (dyn.Rd:14): Warning: missing </ul> before </div>
landscape.html:68:1 (landscape.Rd:29): Warning: missing </ul> before </div>
title.html:67:1 (title.Rd:30): Warning: missing </ul> before </div>
Found the following HTML validation problems:
abline-RobReg-method.html:84:1 (abline-RobReg-method.Rd:34): Warning: missing </ul> before </div>
as.matrix-methods.html:53:1 (as.matrix-methods.Rd:16): Warning: missing </ul> before </div>
getPlot-methods.html:55:1 (getPlot-methods.Rd:21): Warning: missing </ul> before </div>
plot-DepthDensity-ANY-method.html:55:1 (plot-DepthDensity-ANY-method.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Aurora Torrente <etorrent@est-econ.uc3m.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sara",
                      family = "Lopez-Pintado",
                      role = "aut",
                      email = "sl2929@columbia.edu"),
               person(given = "Aurora",
                      family = "Torrente.",
                      role = "aut",
                      email = "etorrent@est-econ.uc3m.es"),
               person(given = "Aurora",
                      family = "Torrente",
                      role = "cre",
                      email = "etorrent@est-econ.uc3m.es"))
as necessary.
checkRd: (-1) barriers.Rd:127: Escaped LaTeX specials: \$
Maintainer: ‘Francisco Parra  <parra_fj@cantabria.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Francisco",
                    family = "Parra",
                    role = c("aut", "cre"),
                    email = "parra_fj@cantabria.es")
as necessary.
Found the following HTML validation problems:
desc_add_remotes.html:61:1 (desc_add_remotes.Rd:21): Warning: missing </ul> before </div>
desc_add_urls.html:58:1 (desc_add_urls.Rd:18): Warning: missing </ul> before </div>
desc_clear_remotes.html:53:1 (desc_clear_remotes.Rd:15): Warning: missing </ul> before </div>
desc_clear_urls.html:53:1 (desc_clear_urls.Rd:15): Warning: missing </ul> before </div>
desc_del_remotes.html:58:1 (desc_del_remotes.Rd:18): Warning: missing </ul> before </div>
desc_del_urls.html:58:1 (desc_del_urls.Rd:18): Warning: missing </ul> before </div>
desc_print.html:48:1 (desc_print.Rd:12): Warning: missing </ul> before </div>
desc_set_remotes.html:58:1 (desc_set_remotes.Rd:17): Warning: missing </ul> before </div>
desc_set_urls.html:58:1 (desc_set_urls.Rd:17): Warning: missing </ul> before </div>
desc_to_latex.html:48:1 (desc_to_latex.Rd:12): Warning: missing </ul> before </div>
desc_validate.html:48:1 (desc_validate.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jakson Aquino <jalvesaq@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jakson", "Aquino.", "Includes", "R", "source", "code", "and/or", "documentation", "written", "by", "Dirk"),
                      family = "Enzmann",
                      role = "aut"),
               person(given = "Marc",
                      family = "Schwartz",
                      role = "aut"),
               person(given = "Nitin",
                      family = "Jain",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Kraft",
                      role = "aut"),
               person(given = "Jakson",
                      family = "Aquino",
                      role = "cre",
                      email = "jalvesaq@gmail.com"))
as necessary.
Maintainer: ‘Harish Kumar <kadamatiharish@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Harish",
                    family = "Kumar",
                    role = c("aut", "cre"),
                    email = "kadamatiharish@gmail.com")
as necessary.
Found the following HTML validation problems:
no.test.html:46:1 (no.test.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Herfindahl.html:69:1 (Herfindahl.Rd:26): Warning: <h3> anchor "_sec_note" already defined
KrippAlpha.html:117:1 (KrippAlpha.Rd:41): Warning: <h3> anchor "_sec_note" already defined
UnirootAll.html:108:1 (UnirootAll.Rd:100): Warning: <h3> anchor "_sec_note" already defined
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mod_template_srv.R’
Found the following HTML validation problems:
assignment_string.html:50:1 (assignment_string.Rd:12): Warning: missing </ul> before </div>
code_fixer.html:54:1 (code_fixer.Rd:14): Warning: missing </ul> before </div>
construct_design_code.html:68:1 (construct_design_code.Rd:24): Warning: missing </ul> before </div>
get_design_code.html:46:1 (get_design_code.Rd:10): Warning: missing </ul> before </div>
return_args.html:50:1 (return_args.Rd:12): Warning: missing </ul> before </div>
str_within.html:50:1 (str_within.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
show.factorContainer.html:46:1 (show.factorContainer.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
aliases.html:93:1 (aliases.Rd:52): Warning: missing </ul> before </div>
Maintainer: ‘Max Kuhn <mxkuhn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Max",
                    family = "Kuhn",
                    role = c("aut", "cre"),
                    email = "mxkuhn@gmail.com")
as necessary.
Maintainer: ‘Stanley E. Lazic <stan.lazic@cantab.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Stanley", "E."),
                    family = "Lazic",
                    role = c("aut", "cre"),
                    email = "stan.lazic@cantab.net")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Robert Adamek <robertadamek94@gmail.com>’

The Description field contains
  covariance estimator in Adamek et al. (2020) <arXiv:2007.10952>. Also
  as described in Adamek et al. (2022) <arXiv:2209.03218>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
coef.desla.html:51:1 (coef.desla.Rd:12): Warning: missing </ul> before </div>
confint.desla.html:59:1 (confint.desla.Rd:16): Warning: missing </ul> before </div>
print.desla.html:70:1 (print.desla.Rd:25): Warning: missing </ul> before </div>
print.summary.desla.html:70:1 (print.summary.desla.Rd:25): Warning: missing </ul> before </div>
summary.desla.html:51:1 (summary.desla.Rd:12): Warning: missing </ul> before </div>
'library' or 'require' call not declared from: ‘nlme’
Maintainer: ‘Norm Matloff <normmatloff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Norm",
                    family = "Matloff",
                    role = c("aut", "cre"),
                    email = "normmatloff@gmail.com")
as necessary.
Found the following HTML validation problems:
preprocess.html:81:1 (preprocess.Rd:33): Warning: missing </ul> before </div>
Maintainer: ‘Daniel Meyer <meyerda@ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Meyer",
                    role = c("aut", "cre"),
                    email = "meyerda@ethz.ch")
as necessary.

The Description field contains
  see: Meyer, D.W. (2016) <arXiv:1610.00345> or Meyer, D.W., Statistics
  (2017) <arXiv:1711.04632> or Meyer, D.W., Journal of Computational and
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘det.construct.Rd’:
    https://doi.org/10.1007/s11222-017-9751-9
  File ‘detpack.Rd’:
    https://doi.org/10.1007/s11222-017-9751-9
    https://doi.org/10.1080/10618600.2018.1482768
Found the following HTML validation problems:
contourRect.html:63:1 (contourRect.Rd:19): Warning: missing </ul> before </div>
Found the following HTML validation problems:
show.DETs.html:46:1 (show.DETs.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Filipe Campelo <fcampelo@ci.uc.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Filipe",
                    family = "Campelo",
                    role = c("aut", "cre"),
                    email = "fcampelo@ci.uc.pt")
as necessary.
Maintainer: ‘Guangsheng Pei <peiguangsheng@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Guangsheng",
                    family = "Pei",
                    role = c("aut", "cre"),
                    email = "peiguangsheng@gmail.com")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘deTS-package.Rd’:
    \keyword{ deTS; TSEA }
Maintainer: ‘Magnus Kristoffersen <magnus.kristoffersen@geo.uio.no>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
calc_ab.html:50:1 (calc_ab.Rd:12): Warning: missing </ul> before </div>
calc_p_apply.html:54:1 (calc_p_apply.Rd:14): Warning: missing </ul> before </div>
calc_quantiles.html:58:1 (calc_quantiles.Rd:16): Warning: missing </ul> before </div>
combine_matrices.html:50:1 (combine_matrices.Rd:12): Warning: missing </ul> before </div>
concX.html:46:1 (concX.Rd:10): Warning: missing </ul> before </div>
concY.html:46:1 (concY.Rd:10): Warning: missing </ul> before </div>
find_maxima.html:54:1 (find_maxima.Rd:14): Warning: missing </ul> before </div>
find_plot_max.html:50:1 (find_plot_max.Rd:12): Warning: missing </ul> before </div>
find_plot_min.html:50:1 (find_plot_min.Rd:12): Warning: missing </ul> before </div>
make_tiling.html:50:1 (make_tiling.Rd:12): Warning: missing </ul> before </div>
plot_ecdf.html:73:1 (plot_ecdf.Rd:27): Warning: missing </ul> before </div>
plot_hf.html:110:1 (plot_hf.Rd:50): Warning: missing </ul> before </div>
plot_quantiles.html:83:1 (plot_quantiles.Rd:33): Warning: missing </ul> before </div>
plot_reimink.html:46:1 (plot_reimink.Rd:10): Warning: missing </ul> before </div>
plot_text_options.html:68:1 (plot_text_options.Rd:24): Warning: missing </ul> before </div>
plot_tile.html:50:1 (plot_tile.Rd:12): Warning: missing </ul> before </div>
quant_bounds.html:54:1 (quant_bounds.Rd:14): Warning: missing </ul> before </div>
run_detzrcr.html:46:1 (run_detzrcr.Rd:10): Warning: missing </ul> before </div>
tile_func.html:46:1 (tile_func.Rd:10): Warning: missing </ul> before </div>
tiling.html:46:1 (tiling.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Robin Van Oirbeek <robin.vanoirbeek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Robin",
                    family = "Van Oirbeek",
                    role = c("aut", "cre"),
                    email = "robin.vanoirbeek@gmail.com")
as necessary.
Maintainer: ‘John Verzani <jverzani@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Original", "by", "Jay", "L."),
                      family = "Devore",
                      role = "aut"),
               person(given = c("modifications", "by", "Douglas"),
                      family = "Bates",
                      role = "aut",
                      email = "bates@stat.wisc.edu"),
               person(given = c("modifications", "for", "7th", "edition", "by", "John"),
                      family = "Verzani.",
                      role = "aut"),
               person(given = "John",
                      family = "Verzani",
                      role = "cre",
                      email = "jverzani@gmail.com"))
as necessary.
Found the following HTML validation problems:
as.package.html:59:1 (as.package.Rd:12): Warning: missing </ul> before </div>
bash.html:47:1 (bash.Rd:11): Warning: missing </ul> before </div>
build_rmd.html:71:1 (build_rmd.Rd:25): Warning: missing </ul> before </div>
build_site.html:55:1 (build_site.Rd:14): Warning: missing </ul> before </div>
clean_vignettes.html:48:1 (clean_vignettes.Rd:11): Warning: missing </ul> before </div>
git_checks.html:48:1 (git_checks.Rd:11): Warning: missing </ul> before </div>
missing_s3.html:47:1 (missing_s3.Rd:11): Warning: missing </ul> before </div>
release_checks.html:48:1 (release_checks.Rd:11): Warning: missing </ul> before </div>
run_examples.html:96:1 (run_examples.Rd:43): Warning: missing </ul> before </div>
show_news.html:56:1 (show_news.Rd:16): Warning: missing </ul> before </div>
spell_check.html:57:1 (spell_check.Rd:15): Warning: missing </ul> before </div>
submit_cran.html:72:1 (submit_cran.Rd:14): Warning: missing </ul> before </div>
test.html:105:1 (test.Rd:44): Warning: missing </ul> before </div>
wd.html:52:1 (wd.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
close_project.html:46:1 (close_project.Rd:10): Warning: missing </ul> before </div>
coef.inter.html:56:1 (coef.inter.Rd:15): Warning: missing </ul> before </div>
plot.p2pass.html:64:1 (plot.p2pass.Rd:21): Warning: missing </ul> before </div>
standards_db.html:74:1 (standards_db.Rd:28): Warning: missing </ul> before </div>
Maintainer: ‘Victor Barreto Mesquita <victormesquita40@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Victor", "Barreto"),
                      family = "Mesquita",
                      role = c("ctb", "aut", "cre"),
                      email = "victormesquita40@hotmail.com"),
               person(given = c("Florêncio", "Mendes", "Oliveira"),
                      family = "Filho",
                      role = c("ctb", "aut")),
               person(given = c("Ian", "Meneghel"),
                      family = "Danilevicz.",
                      role = c("ctb", "aut")))
as necessary.
Maintainer: ‘Shawn Waldroff <swaldroff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shawn",
                    family = "Waldroff",
                    role = c("aut", "cre"),
                    email = "swaldroff@gmail.com")
as necessary.
Maintainer: ‘Jimmy Duong <jkd2108@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ken",
                      family = "Cheung",
                      role = "aut",
                      email = "yc632@columbia.edu"),
               person(given = "Jimmy",
                      family = "Duong",
                      role = "cre",
                      email = "jkd2108@columbia.edu"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘differentiate.R’ ‘gradient.R’ ‘simplify.R’
Maintainer: ‘Victor H. Cervantes <vhcervantesb@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Victor", "H."),
                    family = "Cervantes",
                    role = c("aut", "cre"),
                    email = "vhcervantesb@unal.edu.co")
as necessary.
Found the following HTML validation problems:
get_defol_events.html:46:1 (get_defol_events.Rd:10): Warning: missing </ul> before </div>
plot.defol.html:47:1 (plot.defol.Rd:10): Warning: missing </ul> before </div>
series_names.html:46:1 (series_names.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ravi",
                      family = "Varadhan",
                      role = c("aut", "cre"),
                      email = "ravi.varadhan@jhu.edu"),
               person(given = c("Johns", "Hopkins"),
                      family = "University"),
               person(given = c("Hans", "W."),
                      family = "Borchers",
                      role = "aut"),
               person(given = c("ABB", "Corporate"),
                      family = "Research"),
               person(given = "Vincent",
                      family = "Bechard",
                      role = "aut"),
               person(given = "HEC",
                      family = "Montreal",
                      comment = "Montreal University"))
as necessary.
Maintainer: ‘Leihong Wu <leihong.wu@fda.hhs.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Leihong",
                      family = "Wu",
                      role = c("aut", "cre"),
                      email = "leihong.wu@fda.hhs.gov"),
               person(given = "Weida",
                      family = "Tong",
                      role = "aut",
                      comment = "Weida.tong@fda.hhs.gov"))
as necessary.
Found the following HTML validation problems:
DF_CVsummary.html:50:1 (DF_CVsummary.Rd:12): Warning: missing </ul> before </div>
DF_Trainsummary.html:50:1 (DF_Trainsummary.Rd:12): Warning: missing </ul> before </div>
DF_calp.html:50:1 (DF_calp.Rd:12): Warning: missing </ul> before </div>
multiplot.html:62:1 (multiplot.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Giovanna Capizzi <giovanna.capizzi@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giovanna",
                      family = "Capizzi",
                      role = c("aut", "cre"),
                      email = "giovanna.capizzi@unipd.it"),
               person(given = "Guido",
                      family = "Masarotto",
                      role = "aut"))
as necessary.
Maintainer: ‘Shipei Zeng <shipei.zeng@unswalumni.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shipei",
                    family = "Zeng",
                    role = c("aut", "cre"),
                    email = "shipei.zeng@unswalumni.com")
as necessary.
Maintainer: ‘Nicolae Teodor Melita <nt_melita@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nicolae", "Teodor"),
                    family = "Melita",
                    role = c("aut", "cre"),
                    email = "nt_melita@yahoo.com")
as necessary.
checkRd: (-1) runContrasts.Rd:79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:82: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Sebastian Krantz <sebastian.krantz@graduateinstitute.ch>’

The BugReports field in DESCRIPTION has
  https://github.com/r-barnes/dggridR/
which should likely be
  https://github.com/r-barnes/dggridR/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dggridR.R’
checkRd: (-1) AIC.dglars.Rd:47: Lost braces
    47 | \item{comp}{the measures of model complexity used to compute the measure of goodness-of-fit. It is equal to \code{npar} when code{complexity = "df"};}
       |                                                                                                                                  ^
checkRd: (-1) dglars.Rd:258: Lost braces
   258 |                 \item{\code{7}}{maximum number of solution points ('code{np}') reached.}
       |                                                                         ^
Maintainer: ‘Gordon Smyth <smyth@wehi.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gordon",
                      family = "Smyth",
                      role = c("aut", "cre"),
                      email = "smyth@wehi.edu.au"),
               person(given = c("Peter", "K"),
                      family = "Dunn",
                      role = "aut",
                      email = "pdunn2@usc.edu.au"),
               person(given = c("Robert", "W."),
                      family = "Corty",
                      role = "aut"))
as necessary.
Maintainer: ‘Simon Schwab <schw4b@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Schwab",
                      role = c("aut", "cre"),
                      email = "schw4b@gmail.com"),
               person(given = "Ruth",
                      family = "Harbord",
                      role = "aut",
                      email = "r.harbord@warwick.ac.uk"),
               person(given = "Lilia",
                      family = "Costa",
                      role = "aut",
                      email = "liliacosta@ufba.br"),
               person(given = "Thomas",
                      family = "Nichols",
                      role = "aut",
                      email = "t.e.nichols@warwick.ac.uk"))
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DGM.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
dlmLplCpp.html:70:1 (dlmLplCpp.Rd:22): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
checkSimulations.html:54:1 (checkSimulations.Rd:14): Warning: missing </ul> before </div>
ensurePredictor.html:50:1 (ensurePredictor.Rd:12): Warning: missing </ul> before </div>
plotConventionalResiduals.html:46:1 (plotConventionalResiduals.Rd:10): Warning: missing </ul> before </div>
print.DHARMa.html:51:1 (print.DHARMa.Rd:12): Warning: missing </ul> before </div>
transformQuantiles.html:54:1 (transformQuantiles.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Lumley",
                    role = c("aut", "cre"),
                    email = "t.lumley@auckland.ac.nz")
as necessary.

The Description field contains
  or Regional Councils. The preprint Lumley (2019) <arXiv:1912.04435> is
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Samarendra Das <samarendra4849@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Samarendra",
                      family = "Das",
                      role = c("aut", "cre"),
                      email = "samarendra4849@gmail.com"),
               person(given = c("Baidya", "Nath"),
                      family = "Mandal",
                      role = "aut",
                      email = "mandal.stat@gmail.com"))
as necessary.
Maintainer: ‘Maengseok Noh <msnoh@pknu.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Youngjo",
                      family = "Lee",
                      role = "aut"),
               person(given = "Maengseok",
                      family = "Noh",
                      role = c("aut", "cre"),
                      email = "msnoh@pknu.ac.kr"))
as necessary.
Maintainer: ‘Niklas Pfister <pfister@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niklas",
                      family = "Pfister",
                      role = c("aut", "cre"),
                      email = "pfister@stat.math.ethz.ch"),
               person(given = "Jonas",
                      family = "Peters",
                      role = "aut"))
as necessary.
checkRd: (-1) dHSIC-package.Rd:32: Lost braces
    32 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dHSIC-package.Rd:36: Lost braces
    36 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dHSIC-package.Rd:36: Lost braces
    36 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
checkRd: (-1) dhsic.Rd:84: Lost braces
    84 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dhsic.Rd:88: Lost braces
    88 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dhsic.Rd:88: Lost braces
    88 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
checkRd: (-1) dhsic.test.Rd:124: Lost braces
   124 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dhsic.test.Rd:128: Lost braces
   128 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dhsic.test.Rd:128: Lost braces
   128 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
Maintainer: ‘Mahmoud Elkasabi <mahmoudelkasabi@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mahmoud",
                    family = "Elkasabi",
                    role = c("aut", "cre"),
                    email = "mahmoudelkasabi@gmail.com")
as necessary.
Found the following HTML validation problems:
DiagrammeROutput.html:56:1 (DiagrammeROutput.Rd:16): Warning: missing </ul> before </div>
grVizOutput.html:56:1 (grVizOutput.Rd:16): Warning: missing </ul> before </div>
renderDiagrammeR.html:55:1 (renderDiagrammeR.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Karline Soetaert <karline.soetaert@nioz.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Karline",
                    family = "Soetaert",
                    role = c("aut", "cre"),
                    email = "karline.soetaert@nioz.nl")
as necessary.
Found the following HTML validation problems:
get_batch_sizes.html:63:1 (get_batch_sizes.Rd:21): Warning: missing </ul> before </div>
parameters.html:61:1 (parameters.Rd:23): Warning: missing </ul> before </div>
Maintainer: ‘Shinichiro Tomizono <cowares@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shinichiro",
                    family = "Tomizono",
                    role = c("aut", "cre"),
                    email = "cowares@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘diario.R’
Found the following HTML validation problems:
diat_checkName.html:50:1 (diat_checkName.Rd:13): Warning: missing </ul> before </div>
diat_diversity.html:61:1 (diat_diversity.Rd:11): Warning: missing </ul> before </div>
diat_loadData.html:89:1 (diat_loadData.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Celine Helbert <Celine.Helbert@ec-lyon.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jessica",
                      family = "Franco",
                      role = "aut"),
               person(given = "Delphine",
                      family = "Dupuy",
                      role = "aut"),
               person(given = "Olivier",
                      family = "Roustant",
                      role = "aut"),
               person(given = "Patrice",
                      family = "Kiener",
                      role = "aut"),
               person(given = "Guillaume",
                      family = "Damblin",
                      role = "aut"),
               person(given = "Bertrand",
                      family = "Iooss.",
                      role = "aut"),
               person(given = "Celine",
                      family = "Helbert",
                      role = "cre",
                      email = "Celine.Helbert@ec-lyon.fr"))
as necessary.
Maintainer: ‘C. Helbert <Celine.Helbert@ec-lyon.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "D.",
                      family = "Dupuy",
                      role = "aut"),
               person(given = "C.",
                      family = "Helbert",
                      role = c("aut", "cre"),
                      email = "celine.helbert@ec-lyon.fr"))
as necessary.
Maintainer: ‘Dylan Arena <dylanarena1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dylan",
                    family = "Arena",
                    role = c("aut", "cre"),
                    email = "dylanarena1@gmail.com")
as necessary.
Found the following HTML validation problems:
combn.design.html:52:1 (combn.design.Rd:14): Warning: missing </ul> before </div>
mesh_level.html:66:1 (mesh_level.Rd:20): Warning: missing </ul> before </div>
Maintainer: ‘Liudmila Karagyaur <liudmila.karagyaur@usi.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paul",
                      family = "Schneider",
                      role = c("aut", "ths")),
               person(given = "Liudmila",
                      family = "Karagyaur",
                      role = c("aut", "cre"),
                      email = "liudmila.karagyaur@usi.ch"))
as necessary.
checkRd: (-1) DIconvex.Rd:40: Lost braces; missing escapes or markup?
    40 |  {Paul Schneider <paul.schneider@usi.ch>}{}
       |  ^
checkRd: (-1) define.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:17-18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:21-22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
did2s.html:251:1 (did2s.Rd:192): Warning: missing </ul> before </div>
honest_did_did2s.html:151:1 (honest_did_did2s.Rd:82): Warning: missing </ul> before </div>
Maintainer: ‘Christian Vincenot <christian@vincenot.biz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christian",
                    family = "Vincenot",
                    role = c("aut", "cre"),
                    email = "christian@vincenot.biz")
as necessary.
Maintainer: ‘Kyle Butts <kyle.butts@colorado.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/didimputation.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) did_imputation.Rd:74: Lost braces; missing escapes or markup?
    74 | form average treatment effects for groups of {it}.
       |                                              ^
Found the following HTML validation problems:
did_imputation.html:199:1 (did_imputation.Rd:136): Warning: missing </ul> before </div>
Found the following HTML validation problems:
DIDparams.html:263:1 (DIDparams.Rd:175): Warning: missing </ul> before </div>
MP.TEST.html:94:1 (MP.TEST.Rd:39): Warning: missing </ul> before </div>
ggdid.AGGTEobj.html:99:1 (ggdid.AGGTEobj.Rd:44): Warning: missing </ul> before </div>
ggdid.MP.html:116:1 (ggdid.MP.Rd:55): Warning: missing </ul> before </div>
ggdid.html:50:1 (ggdid.Rd:12): Warning: missing </ul> before </div>
glance.AGGTEobj.html:51:1 (glance.AGGTEobj.Rd:12): Warning: missing </ul> before </div>
glance.MP.html:51:1 (glance.MP.Rd:12): Warning: missing </ul> before </div>
print.AGGTEobj.html:51:1 (print.AGGTEobj.Rd:12): Warning: missing </ul> before </div>
print.MP.html:51:1 (print.MP.Rd:12): Warning: missing </ul> before </div>
summary.AGGTEobj.html:51:1 (summary.AGGTEobj.Rd:12): Warning: missing </ul> before </div>
summary.MP.html:51:1 (summary.MP.Rd:12): Warning: missing </ul> before </div>
summary.MP.TEST.html:51:1 (summary.MP.TEST.Rd:12): Warning: missing </ul> before </div>
tidy.AGGTEobj.html:51:1 (tidy.AGGTEobj.Rd:12): Warning: missing </ul> before </div>
tidy.MP.html:51:1 (tidy.MP.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Christian Graul <christian.graul@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christian",
                    family = "Graul",
                    role = c("aut", "cre"),
                    email = "christian.graul@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Riaz Arbi <diffdfs@arbidata.com>’

The BugReports field in DESCRIPTION has
  https://github.com/riazarbi/diffdfs
which should likely be
  https://github.com/riazarbi/diffdfs/issues
instead.
Maintainer: ‘Beilun Wang <bw4mw@virginia.edu>’

The Description field contains
  Yanjun Qi (2018) <arXiv:1710.11223>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

The BugReports field in DESCRIPTION has
  https://github.com/QData/DIFFEE
which should likely be
  https://github.com/QData/DIFFEE/issues
instead.
Maintainer: ‘Michele Braccini <braccini.michele@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michele",
                    family = "Braccini",
                    role = c("aut", "cre"),
                    email = "braccini.michele@gmail.com")
as necessary.
Maintainer: ‘Ali Santacruz <amsantac@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Robert", "Gilmore"),
                      family = "Pontius Jr.",
                      role = "aut",
                      email = "rpontius@clarku.edu"),
               person(given = "Ali",
                      family = "Santacruz",
                      role = c("aut", "cre"),
                      email = "amsantac@unal.edu.co"))
as necessary.
Maintainer: ‘Dylan Molenaar <d.molenaar@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dylan",
                    family = "Molenaar",
                    role = c("aut", "cre"),
                    email = "d.molenaar@uva.nl")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
finalizeHtml.html:71:1 (finalizeHtml.Rd:26): Warning: missing </ul> before </div>
Maintainer: ‘Benjamin Rubinstein <brubinstein@unimelb.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid file URI:
  URI: commits/master
    From: README.md

The Description field contains
  sensitivity sampler (Rubinstein & Alda, 2017) <arXiv:1706.02562>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) sensitivitySamplerManual-DPMech-function-numeric-numeric-numeric-method.Rd:25: Lost braces
    25 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
checkRd: (-1) sensitivitySamplerManual-DPMechNumeric-function-numeric-numeric-numeric-method.Rd:25: Lost braces
    25 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
checkRd: (-1) sensitivitySamplerManual.Rd:22: Lost braces
    22 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
Found the following HTML validation problems:
sensitivityNorm.html:55:1 (sensitivityNorm.Rd:14): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Joseph Richards [aut] (joeyrichar), Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood)’
  Authors@R: ‘Joseph Richards [aut] (github: joeyrichar), Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood)’
checkRd: (-1) simulate_diff_tables.Rd:72: Lost braces; missing escapes or markup?
    72 |   {The Sharma-Song test} {\code{\link[DiffXTables]{sharma.song.test}}}
       |   ^
checkRd: (-1) simulate_diff_tables.Rd:74: Lost braces; missing escapes or markup?
    74 |   {The comparative chi-squared test} {\code{\link[DiffXTables]{cp.chisq.test}}}
       |   ^
checkRd: (-1) simulate_diff_tables.Rd:76: Lost braces; missing escapes or markup?
    76 |   {The heterogeneity test} {\code{\link[DiffXTables]{heterogeneity.test}}}
       |   ^
Maintainer: ‘Huseyin Yildiz <huseyinyildiz35@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Huseyin",
                    family = "Yildiz",
                    role = c("aut", "cre"),
                    email = "huseyinyildiz35@gmail.com")
as necessary.
Maintainer: ‘Moritz Berger <moritz.berger@imbie.uni-bonn.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Moritz",
                    family = "Berger",
                    role = c("aut", "cre"),
                    email = "moritz.berger@imbie.uni-bonn.de")
as necessary.
'::' or ':::' import not declared from: ‘rbenchmark’
Maintainer: ‘Xutao Deng <xutaodeng@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xutao",
                    family = "Deng",
                    role = c("aut", "cre"),
                    email = "xutaodeng@gmail.com")
as necessary.
Maintainer: ‘Jaime Ashander <jashander@ucdavis.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Mark Hubbe <hubbe.1@osu.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dilp_functions.R’
Found the following HTML validation problems:
dimensio-defunct.html:58:1 (dimensio-defunct.Rd:29): Warning: missing </ul> before </div>
Maintainer: ‘Cenny Taslim <taslim.2@osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cenny",
                      family = "Taslim",
                      role = c("aut", "cre"),
                      email = "taslim.2@osu.edu"),
               person(given = c("with", "contributions", "from", "Dustin"),
                      family = "Potter",
                      role = "aut"),
               person(given = "Abbasali",
                      family = "Khalili",
                      role = "aut"),
               person(given = "Shili",
                      family = "Lin.",
                      role = "aut",
                      email = "shili@stat.osu.edu"))
as necessary.
checkRd: (-1) DIME.Rd:272: Lost braces; missing escapes or markup?
   272 | \item{name}{the name of the model {"GNG", "iNUDGE","NUDGE"} where
       |                                   ^
Maintainer: ‘Savio Andrea <svandr97@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zanghi",
                      family = "Federico",
                      role = "aut"),
               person(given = "Savio",
                      family = "Andrea",
                      role = c("aut", "cre"),
                      email = "svandr97@gmail.com"),
               person(given = "Filippo",
                      family = "Ziliotto",
                      role = "aut"),
               person(given = "Bessi",
                      family = "Alessandro",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
as.data.frame.html:61:1 (as.data.frame.Rd:16): Warning: missing </ul> before </div>
getData.html:46:1 (getData.Rd:10): Warning: missing </ul> before </div>
getDimRedData.html:50:1 (getDimRedData.Rd:12): Warning: missing </ul> before </div>
getMeta.html:50:1 (getMeta.Rd:12): Warning: missing </ul> before </div>
getNDim.html:50:1 (getNDim.Rd:12): Warning: missing </ul> before </div>
getOrgData.html:50:1 (getOrgData.Rd:12): Warning: missing </ul> before </div>
getOtherData.html:50:1 (getOtherData.Rd:12): Warning: missing </ul> before </div>
getPars.html:50:1 (getPars.Rd:12): Warning: missing </ul> before </div>
ndims.html:50:1 (ndims.Rd:12): Warning: missing </ul> before </div>
print.html:50:1 (print.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘René Schulenberg <reneschulenberg@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "René",
                    family = "Schulenberg",
                    role = c("aut", "cre"),
                    email = "reneschulenberg@gmail.com")
as necessary.
Found the following HTML validation problems:
day_of_isoyear.html:72:1 (day_of_isoyear.Rd:37): Warning: missing </ul> before </div>
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ryan", "C."),
                      family = "Sartor",
                      role = c("aut", "cre"),
                      email = "sartorry@gmail.com"),
               person(given = "Kathleen",
                      family = "Greenham",
                      role = "aut",
                      email = "greenham@umn.edu"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
151,155d150
< Warning: `aes_string()` was deprecated in ggplot2 3.0.0.
< ℹ Please use tidy evaluation idioms with `aes()`.
< ℹ See also `vignette("ggplot2-in-packages")` for more information.
< ℹ The deprecated feature was likely used in the dipm package.
<   Please report the issue to the authors.
File ‘dipsaus/libs/dipsaus.so’:
  Found non-API call to R: ‘ENCLOS’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
use_shiny_dipsaus.html:47:1 (use_shiny_dipsaus.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Ruoqi Yu <ruoqiyu125@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ruoqi",
                    family = "Yu",
                    role = c("aut", "cre"),
                    email = "ruoqiyu125@gmail.com")
as necessary.
Maintainer: ‘Yuhao Wang <yuhaow.thu@gmail.com>’

The Description field contains
  High-Dimensional Confounders" <arXiv:2011.08661>. The package relies on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
cde_aipw.html:55:1 (cde_aipw.Rd:16): Warning: missing </ul> before </div>
cde_ipw.html:54:1 (cde_ipw.Rd:15): Warning: missing </ul> before </div>
cde_reg_impute.html:48:1 (cde_reg_impute.Rd:11): Warning: missing </ul> before </div>
cde_telescope_match.html:48:1 (cde_telescope_match.Rd:11): Warning: missing </ul> before </div>
estimate.html:89:1 (estimate.Rd:40): Warning: missing </ul> before </div>
outreg_model.html:84:1 (outreg_model.Rd:35): Warning: missing </ul> before </div>
plot.cdesens.html:113:1 (plot.cdesens.Rd:54): Warning: missing </ul> before </div>
seq_g_vcov.html:62:1 (seq_g_vcov.Rd:18): Warning: missing </ul> before </div>
summary.seqg.html:52:1 (summary.seqg.Rd:13): Warning: missing </ul> before </div>
summary.seqgboots.html:55:1 (summary.seqgboots.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Pengyi Yang <yangpy7@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Pengyi", "Yang", "&", "Ellis"),
                      family = "Patrick",
                      role = "aut"),
               person(given = "Pengyi",
                      family = "Yang",
                      role = "cre",
                      email = "yangpy7@gmail.com"))
as necessary.
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Audrey", "Qiuyan"),
                      family = "Fu",
                      role = "aut"),
               person(given = "Steven",
                      family = "Russell",
                      role = "aut"),
               person(given = c("Sarah", "J."),
                      family = "Bray",
                      role = "aut"),
               person(given = "Simon",
                      family = "Tavare",
                      role = "aut"),
               person(given = c("Audrey", "Q."),
                      family = "Fu",
                      role = "cre",
                      email = "audreyqyfu@gmail.com"))
as necessary.
Maintainer: ‘Christiana Kartsonaki <christiana.kartsonaki@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christiana",
                    family = "Kartsonaki",
                    role = c("aut", "cre"),
                    email = "christiana.kartsonaki@gmail.com")
as necessary.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:128:1 (inst/NEWS.Rd:49): Warning: missing </ul> before </div>
NEWS.html:94:1 (inst/NEWS.Rd:37): Warning: <h4> anchor "New-features" already defined
NEWS.html:111:1 (inst/NEWS.Rd:44): Warning: <h4> anchor "Methods-update" already defined
Found the following HTML validation problems:
DirichletHMMCreate.html:58:1 (DirichletHMMCreate.Rd:16): Warning: missing </ul> before </div>
DirichletProcessCreate.html:64:1 (DirichletProcessCreate.Rd:21): Warning: missing </ul> before </div>
DirichletProcessMvnormal.html:63:1 (DirichletProcessMvnormal.Rd:21): Warning: missing </ul> before </div>
DirichletProcessMvnormal2.html:54:1 (DirichletProcessMvnormal2.Rd:14): Warning: missing </ul> before </div>
GlobalParameterUpdate.html:46:1 (GlobalParameterUpdate.Rd:10): Warning: missing </ul> before </div>
LikelihoodDP.html:46:1 (LikelihoodDP.Rd:10): Warning: missing </ul> before </div>
MixingDistribution.html:69:1 (MixingDistribution.Rd:24): Warning: missing </ul> before </div>
Mvnormal2Create.html:46:1 (Mvnormal2Create.Rd:10): Warning: missing </ul> before </div>
MvnormalCreate.html:46:1 (MvnormalCreate.Rd:10): Warning: missing </ul> before </div>
PenalisedLikelihood.html:57:1 (PenalisedLikelihood.Rd:19): Warning: missing </ul> before </div>
PriorDensity.html:59:1 (PriorDensity.Rd:22): Warning: missing </ul> before </div>
UpdateAlphaBeta.html:46:1 (UpdateAlphaBeta.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Torben Tvedebrink <tvede@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Torben",
                    family = "Tvedebrink",
                    role = c("aut", "cre"),
                    email = "tvede@math.aau.dk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Eduardo García-Portugués <edgarcia@est-econ.uc3m.es>’

The BugReports field in DESCRIPTION has
  https://github.com/egarpor/DirStats
which should likely be
  https://github.com/egarpor/DirStats/issues
instead.
Found the following HTML validation problems:
check.format.html:54:1 (check.format.Rd:14): Warning: missing </ul> before </div>
foldchange.seq.twoclass.unpaired.html:54:1 (foldchange.seq.twoclass.unpaired.Rd:14): Warning: missing </ul> before </div>
sammy.html:166:1 (sammy.Rd:96): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print.npdf.html:55:1 (print.npdf.Rd:14): Warning: missing </ul> before </div>
print.npdflist.html:55:1 (print.npdflist.Rd:14): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
get_rank.html:50:1 (get_rank.Rd:12): Warning: missing </ul> before </div>
plot.ranked_contrib_pairs.html:64:1 (plot.ranked_contrib_pairs.Rd:19): Warning: missing </ul> before </div>
print.contrib_pairs.html:51:1 (print.contrib_pairs.Rd:12): Warning: missing </ul> before </div>
print.ranked_contrib_pairs.html:61:1 (print.ranked_contrib_pairs.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Mikkel Meyer Andersen <mikl@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mikkel", "Meyer"),
                      family = "Andersen",
                      role = c("aut", "cre"),
                      email = "mikl@math.aau.dk"),
               person(given = c("Poul", "Svante"),
                      family = "Eriksen",
                      role = "aut"))
as necessary.
Maintainer: ‘Njål Foldnes <njal.foldnes@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
discord_data_fast.html:95:1 (discord_data_fast.Rd:43): Warning: missing </ul> before </div>
discord_data_ram_optimized.html:95:1 (discord_data_ram_optimized.Rd:43): Warning: missing </ul> before </div>
make_mean_diffs.html:52:1 (make_mean_diffs.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
checks.html:140:1 (checks.Rd:68): Warning: missing </ul> before </div>
dube.html:58:1 (dube.Rd:17): Warning: missing </ul> before </div>
Found the following HTML validation problems:
discovr.html:469:1 (discovr.Rd:199): Warning: <h4> anchor "Colour-palettes" already defined
Specified C++11: please drop specification unless essential
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessandro",
                      family = "Barbiero",
                      role = c("aut", "cre"),
                      email = "alessandro.barbiero@unimi.it"),
               person(given = "Riccardo",
                      family = "Inchingolo",
                      role = "aut"),
               person(given = "Mario",
                      family = "Samigli",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘estdiweibull.Rd’:
    \keyword{distribution, htest}
  File ‘heuristic.Rd’:
    \keyword{distribution, htest}
  File ‘loglikediw.Rd’:
    \keyword{distribution, htest}
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessandro",
                      family = "Barbiero",
                      role = c("aut", "cre"),
                      email = "alessandro.barbiero@unimi.it"),
               person(given = "Riccardo",
                      family = "Inchingolo",
                      role = "aut",
                      email = "dott.inchingolo_r@libero.it"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘estdlaplace2.Rd’:
    \keyword{distribution,htest}
  File ‘iFI.Rd’:
    \keyword{distribution,htest}
  File ‘iFI2.Rd’:
    \keyword{distribution,htest}

Found the following URLs which should use \doi (with the DOI name only):
  File ‘DiscreteLaplace-package.Rd’:
    http://dx.doi.org/10.1007/s10463-005-0029-1
    http://dx.doi.org/10.1016/j.stamet.2013.07.002
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alessandro",
                    family = "Barbiero",
                    role = c("aut", "cre"),
                    email = "alessandro.barbiero@unimi.it")
as necessary.
Maintainer: ‘HyunJi Kim <polaris7867@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "HyunJi",
                    family = "Kim",
                    role = c("aut", "cre"),
                    email = "polaris7867@gmail.com")
as necessary.
checkRd: (-1) mc_attitudes.Rd:52: Lost braces
    52 | P\'{a}ez, A. (2013). Mapping travelers’ attitudes: does space matter?. Journal of Transport Geography, 26, 117-125. (https://doi.org/10.1016/j.jtrangeo.2012.09.002)
       |    ^
checkRd: (-1) mc_commute.csv.Rd:49: Lost braces
    49 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_commute_long.Rd:74: Lost braces
    74 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_commute_wide.Rd:87: Lost braces
    87 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_modality.Rd:50: Lost braces
    50 | Lavery, T., P\'{a}ez, A., & Kanaroglou, P.S. (2013). Driving out of choices: An investigation of transport modality in a university sample. Transportation Research Part A: Policy and Practice, 57:37-46 (https://doi.org/10.1016/j.tra.2013.09.010)
       |                ^
Maintainer: ‘Thomas Welchowski <welchow@imbie.meb.uni-bonn.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thomas",
                      family = "Welchowski",
                      role = c("aut", "cre"),
                      email = "welchow@imbie.meb.uni-bonn.de"),
               person(given = "Moritz",
                      family = "Berger",
                      role = "aut",
                      email = "moritz.berger@imbie.uni-bonn.de"),
               person(given = "David",
                      family = "Koehler",
                      role = "aut",
                      email = "koehler@imbie.uni-bonn.de"),
               person(given = "Matthias",
                      family = "Schmid",
                      role = "aut",
                      email = "matthias.schmid@imbie.uni-bonn.de"))
as necessary.
checkRd: (-1) cIndex.Rd:32: Lost braces; missing escapes or markup?
    32 | [a_{q-1}, a_q) are available.
       |    ^
checkRd: (-1) cIndexCompRisks.Rd:31: Lost braces; missing escapes or markup?
    31 | [a_{q-1}, a_q) are available.
       |    ^
checkRd: (-1) dataCensoring.Rd:78: Escaped LaTeX specials: \&
checkRd: (-1) dataLong.Rd:170: Escaped LaTeX specials: \&
checkRd: (-1) dataLongCompRisksTimeDep.Rd:130: Escaped LaTeX specials: \&
checkRd: (-1) dataLongMultiSpell.Rd:123: Escaped LaTeX specials: \&
checkRd: (-1) dataLongTimeDep.Rd:96: Escaped LaTeX specials: \&
checkRd: (-1) estMargProb.Rd:23: Lost braces; missing escapes or markup?
    23 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estMargProbCompRisks.Rd:24: Lost braces; missing escapes or markup?
    24 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estSurv.Rd:23: Lost braces; missing escapes or markup?
    23 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estSurvCompRisks.Rd:24: Lost braces; missing escapes or markup?
    24 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) lifeTable.Rd:21: Lost braces; missing escapes or markup?
    21 | [a_0, a_1), [a_1, a_2), ..., [a_{q-1}, a_q) ("character vector")}
       |                                 ^
Found the following HTML validation problems:
dict_sample.html:55:1 (dict_sample.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
DiseasystoreBase.html:169:1 (DiseasystoreBase.Rd:119): Warning: <h5> anchor "Usage" already defined
DiseasystoreBase.html:180:1 (DiseasystoreBase.Rd:128): Warning: <h5> anchor "Arguments" already defined
DiseasystoreBase.html:200:1 (DiseasystoreBase.Rd:142): Warning: <h5> anchor "Returns" already defined
DiseasystoreBase.html:218:1 (DiseasystoreBase.Rd:152): Warning: <h5> anchor "Usage" already defined
DiseasystoreBase.html:229:1 (DiseasystoreBase.Rd:161): Warning: <h5> anchor "Arguments" already defined
DiseasystoreBase.html:248:1 (DiseasystoreBase.Rd:174): Warning: <h5> anchor "Returns" already defined
DiseasystoreBase.html:265:1 (DiseasystoreBase.Rd:183): Warning: <h5> anchor "Usage" already defined
DiseasystoreBase.html:271:1 (DiseasystoreBase.Rd:187): Warning: <h5> anchor "Arguments" already defined
DiseasystoreEcdcRespiratoryViruses.html:112:1 (DiseasystoreEcdcRespiratoryViruses.Rd:68): Warning: <h5> anchor "Usage" already defined
DiseasystoreEcdcRespiratoryViruses.html:118:1 (DiseasystoreEcdcRespiratoryViruses.Rd:72): Warning: <h5> anchor "Arguments" already defined
DiseasystoreSimulist.html:110:1 (DiseasystoreSimulist.Rd:66): Warning: <h5> anchor "Usage" already defined
DiseasystoreSimulist.html:116:1 (DiseasystoreSimulist.Rd:70): Warning: <h5> anchor "Arguments" already defined
FeatureHandler.html:149:1 (FeatureHandler.Rd:126): Warning: <h5> anchor "Usage" already defined
FeatureHandler.html:155:1 (FeatureHandler.Rd:130): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘Tao Wang <tao.wang@utsouthwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tao",
                    family = "Wang",
                    role = c("aut", "cre"),
                    email = "tao.wang@utsouthwestern.edu")
as necessary.
Maintainer: ‘Hasanthi A. Pathberiya <hasanthi@sjp.ac.lk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hasanthi", "A."),
                    family = "Pathberiya",
                    role = c("aut", "cre"),
                    email = "hasanthi@sjp.ac.lk")
as necessary.
checkRd: (-1) csv_to_disk.frame.Rd:56: Lost braces; missing escapes or markup?
    56 | strings, and you are encouraged to use {fasttime} to convert the strings to
       |                                        ^
checkRd: (-1) purrr_as_mapper.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{.f}{a normal function or purrr syntax function i.e. `~{ ...code...}`}
       |                                                             ^
Found the following HTML validation problems:
bind_rows.disk.frame.html:46:1 (bind_rows.disk.frame.Rd:10): Warning: missing </ul> before </div>
colnames.html:62:1 (colnames.Rd:21): Warning: missing </ul> before </div>
disk.frame_to_parquet.html:50:1 (disk.frame_to_parquet.Rd:12): Warning: missing </ul> before </div>
evalparseglue.html:50:1 (evalparseglue.Rd:12): Warning: missing </ul> before </div>
find_globals_recursively.html:50:1 (find_globals_recursively.Rd:12): Warning: missing </ul> before </div>
gen_datatable_synthetic.html:50:1 (gen_datatable_synthetic.Rd:12): Warning: missing </ul> before </div>
get_partition_paths.html:47:1 (get_partition_paths.Rd:11): Warning: missing </ul> before </div>
one-stage-group-by-verbs.html:116:1 (one-stage-group-by-verbs.Rd:97): Warning: missing </ul> before </div>
partition_filter.html:50:1 (partition_filter.Rd:12): Warning: missing </ul> before </div>
play.html:50:1 (play.Rd:12): Warning: missing </ul> before </div>
print.disk.frame.html:51:1 (print.disk.frame.Rd:12): Warning: missing </ul> before </div>
pull.disk.frame.html:59:1 (pull.disk.frame.Rd:16): Warning: missing </ul> before </div>
purrr_as_mapper.html:46:1 (purrr_as_mapper.Rd:10): Warning: missing </ul> before </div>
shardkey.html:46:1 (shardkey.Rd:10): Warning: missing </ul> before </div>
shardkey_equal.html:50:1 (shardkey_equal.Rd:12): Warning: missing </ul> before </div>
split_string_into_df.html:46:1 (split_string_into_df.Rd:10): Warning: missing </ul> before </div>
tbl_vars.disk.frame.html:51:1 (tbl_vars.disk.frame.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Gábor Csárdi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gábor",
                    family = "Csárdi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Maintainer: ‘Pierre Roudier <roudierp@landcareresearch.co.nz>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dissever.Rd’:
    http://dx.doi.org/10.1016/j.cageo.2011.08.021
  File ‘edgeroi.Rd’:
    http://dx.doi.org/10.1016/S0016-7061(03)00223-4
    http://dx.doi.org/10.1016/j.geoderma.2009.10.007
Maintainer: ‘Sang Kyu Lee <lsk0816@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sang", "Kyu"),
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "lsk0816@gmail.com"),
               person(given = "Adelchi",
                      family = "Azzalini",
                      role = "aut",
                      email = "adelchi.azzalini@unipd.it"),
               person(given = "Hyoung-Moon",
                      family = "Kim",
                      role = "aut",
                      email = "hmk966a@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘CreditMDR.Rd’:
    https://doi.org/10.1007/s10260-018-0427-1
  File ‘DiSSMod.Rd’:
    https://doi.org/10.1007/s10260-018-0427-1
  File ‘DoctorRWM.Rd’:
    https://doi.org/10.1002/jae.680
    https://doi.org/10.1007/s10260-018-0427-1
Found the following HTML validation problems:
print.dht_result.html:60:1 (print.dht_result.Rd:17): Warning: missing </ul> before </div>
File ‘distcomp/libs/distcomp.so’:
  Found non-API call to R: ‘NAMED’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Odile Sauzet <odile.sauzet@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Odile",
                    family = "Sauzet",
                    role = c("aut", "cre"),
                    email = "odile.sauzet@uni-bielefeld.de")
as necessary.

The Description field contains
  <arXiv:1809.03279> for more information.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Zhiqiu Hu <zhiqiu.hu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhiqiu",
                      family = "Hu",
                      role = c("aut", "cre"),
                      email = "zhiqiu.hu@gmail.com"),
               person(given = "Rong-cai",
                      family = "Yang",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
plot.distfree.cr.html:57:1 (plot.distfree.cr.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
create_article.html:71:1 (create_article.Rd:27): Warning: missing </ul> before </div>
distill_website.html:54:1 (distill_website.Rd:14): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dev_package.R’
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dapply.Rd:27-30: Lost braces
    27 | udf <- function(x){
       |                   ^
Maintainer: ‘Christopher Casement <casementc@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dists.Rd: betareg
  moments.Rd: betareg, gamlss, bamlss
  plot_dist.Rd: gamlss, bamlss, betareg, ggplot2
  plot_moments.Rd: gamlss, bamlss, betareg
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
reshape_into_long.html:57:1 (reshape_into_long.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
0distrEllipse-package.html:146:1 (0distrEllipse-package.Rd:98): Warning: <h3> anchor "Start-up-Banner" already defined
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mixture.R’
Found the following HTML validation problems:
cdf.html:61:1 (cdf.Rd:19): Warning: missing </ul> before </div>
covariance.distribution.html:54:1 (covariance.distribution.Rd:12): Warning: missing </ul> before </div>
density.distribution.html:62:1 (density.distribution.Rd:16): Warning: missing </ul> before </div>
dist_inflated.html:54:1 (dist_inflated.Rd:14): Warning: missing </ul> before </div>
generate.distribution.html:57:1 (generate.distribution.Rd:14): Warning: missing </ul> before </div>
hdr.html:51:1 (hdr.Rd:12): Warning: missing </ul> before </div>
hdr.distribution.html:65:1 (hdr.distribution.Rd:16): Warning: missing </ul> before </div>
is_hdr.html:46:1 (is_hdr.Rd:10): Warning: missing </ul> before </div>
is_hilo.html:46:1 (is_hilo.Rd:10): Warning: missing </ul> before </div>
kurtosis.html:53:1 (kurtosis.Rd:15): Warning: missing </ul> before </div>
likelihood.html:63:1 (likelihood.Rd:22): Warning: missing </ul> before </div>
mean.distribution.html:54:1 (mean.distribution.Rd:12): Warning: missing </ul> before </div>
median.distribution.html:58:1 (median.distribution.Rd:14): Warning: missing </ul> before </div>
new_dist.html:57:1 (new_dist.Rd:14): Warning: missing </ul> before </div>
new_support_region.html:54:1 (new_support_region.Rd:14): Warning: missing </ul> before </div>
quantile.distribution.html:61:1 (quantile.distribution.Rd:16): Warning: missing </ul> before </div>
skewness.html:53:1 (skewness.Rd:15): Warning: missing </ul> before </div>
support.html:53:1 (support.Rd:15): Warning: missing </ul> before </div>
variance.distribution.html:54:1 (variance.distribution.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Florian Lerch <lerch@mathematik.uni-marburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Florian",
                      family = "Lerch",
                      role = c("aut", "cre"),
                      email = "lerch@mathematik.uni-marburg.de"),
               person(given = "Jorn",
                      family = "Lotsch",
                      role = "aut"),
               person(given = "Alfred",
                      family = "Ultsch",
                      role = "aut"))
as necessary.
Maintainer: ‘Ruben Dewitte <ruben0dewitte@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘fit_US_cities.Rd’:
    http://doi.org/10.3886/E113328V1
Maintainer: ‘Ning Cui <2433971953@qq.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ning",
                      family = "Cui",
                      role = c("aut", "cre"),
                      email = "2433971953@qq.com"),
               person(given = "Maoyuan",
                      family = "Zhou",
                      role = "ctb"))
as necessary.
Found the following HTML validation problems:
0distrSim-package.html:164:1 (0distrSim-package.Rd:118): Warning: <h3> anchor "Start-up-Banner" already defined
Found the following HTML validation problems:
mock-db-methods.html:183:1 (mock-db-methods.Rd:132): Warning: missing </ul> before </div>
Maintainer: ‘Daniel Laydon <d.laydon@imperial.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Daniel", "J."),
                      family = "Laydon",
                      role = "aut"),
               person(given = "Aaron",
                      family = "Sim",
                      role = "aut"),
               person(given = c("Charles", "R.M."),
                      family = "Bangham",
                      role = "aut"),
               person(given = "Becca",
                      family = "Asquith",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Laydon",
                      role = "cre",
                      email = "d.laydon@imperial.ac.uk"))
as necessary.
Maintainer: ‘Sean A. S. Anderson <sean.as.anderson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sean", "A.", "S."),
                      family = "Anderson",
                      role = c("aut", "cre"),
                      email = "sean.as.anderson@gmail.com"),
               person(given = c("Jason", "T."),
                      family = "Weir",
                      role = "aut"))
as necessary.
Maintainer: ‘Olisaeloka Nsonwu <olisa.nsonwu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Olisaeloka",
                    family = "Nsonwu",
                    role = c("aut", "cre"),
                    email = "olisa.nsonwu@gmail.com")
as necessary.
Found the following HTML validation problems:
d_report.html:66:1 (d_report.Rd:26): Warning: missing </ul> before </div>
make_s4_ids.html:127:1 (make_s4_ids.Rd:65): Warning: missing </ul> before </div>
Maintainer: ‘Dong-Joon Lim <tgno3.com@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dong-Joon",
                      family = "Lim",
                      role = c("aut", "cre"),
                      email = "tgno3.com@gmail.com"),
               person(family = "Ph.D.",
                      role = "aut",
                      email = "technometrics.org"))
as necessary.
Found the following HTML validation problems:
attach_file_to_node.html:64:1 (attach_file_to_node.Rd:20): Warning: missing </ul> before </div>
err_handler.html:46:1 (err_handler.Rd:10): Warning: missing </ul> before </div>
filters_to_text_query.html:50:1 (filters_to_text_query.Rd:12): Warning: missing </ul> before </div>
is.dkan_list.html:56:1 (is.dkan_list.Rd:20): Warning: missing </ul> before </div>
is.dkan_node.html:62:1 (is.dkan_node.Rd:26): Warning: missing </ul> before </div>
Maintainer: ‘Haydar Demirhan <haydar.demirhan@rmit.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haydar",
                    family = "Demirhan",
                    role = c("aut", "cre", "cph"),
                    email = "haydar.demirhan@rmit.edu.au",
                    comment = c(ORCID = "0000-0002-8565-4710"))
as necessary.
Maintainer: ‘Hamed Haseli Mashhadi <hamedhaseli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hamed", "Haseli"),
                    family = "Mashhadi",
                    role = c("aut", "cre"),
                    email = "hamedhaseli@gmail.com")
as necessary.
Maintainer: ‘Shijia Zhang <zsj27@mail.ustc.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Shijia", "Zhang;", "Meng"),
                      family = "Li",
                      role = "aut"),
               person(given = "Shijia",
                      family = "Zhang",
                      role = "cre",
                      email = "zsj27@mail.ustc.edu.cn"))
as necessary.
Maintainer: ‘Jan Wijffels <jwijffels@bnosac.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jan",
                      family = "Wijffels",
                      role = c("aut", "cre"),
                      email = "jwijffels@bnosac.be"),
               person(family = "BNOSAC",
                      role = "aut"),
               person(given = "Davis",
                      family = "King",
                      role = "aut"),
               person(given = c("dlib", "package"),
                      family = "authors",
                      role = "aut",
                      comment = "see file AUTHORS"))
as necessary.
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wei",
                      family = "Yuan",
                      role = "aut"),
               person(given = "Zhenyu",
                      family = "Wang",
                      role = "aut"),
               person(given = "Zijian",
                      family = "Guo",
                      role = c("aut", "cre"),
                      email = "zijguo@stat.rutgers.edu"),
               person(given = "Cun-Hui",
                      family = "Zhang",
                      role = "aut"))
as necessary.

The Description field contains
  <arxiv:1907.12732>. It constructs the confidence interval for the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    Changes to previous versions
    Minor changes
    Fixes
    Previous Versions
Found the following HTML validation problems:
DBSRA_.html:63:1 (DBSRA_.Rd:19): Warning: missing </ul> before </div>
DBSRAopt.html:78:1 (DBSRAopt.Rd:26): Warning: missing </ul> before </div>
DD_.html:59:1 (DD_.Rd:17): Warning: missing </ul> before </div>
DD_R.html:98:1 (DD_R.Rd:42): Warning: missing </ul> before </div>
Fdem_.html:58:1 (Fdem_.Rd:16): Warning: missing </ul> before </div>
Fratio_.html:58:1 (Fratio_.Rd:16): Warning: missing </ul> before </div>
Islope_.html:67:1 (Islope_.Rd:21): Warning: missing </ul> before </div>
LBSPR_.html:66:1 (LBSPR_.Rd:20): Warning: missing </ul> before </div>
getr.html:78:1 (getr.Rd:26): Warning: missing </ul> before </div>
iVB.html:58:1 (iVB.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Alessandro Magrini <alessandro.magrini@unifi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alessandro",
                    family = "Magrini",
                    role = c("aut", "cre"),
                    email = "alessandro.magrini@unifi.it")
as necessary.
Maintainer: ‘Corinne Emmenegger <emmenegger@stat.math.ethz.ch>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  Learning in Partially Linear Endogenous Models" <arXiv:2101.12525> and
  Emmenegger and Buehlmann (2021) <arXiv:2108.13657> "Double Machine
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yuan Tang <terrytangyuan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuan",
                      family = "Tang",
                      role = c("aut", "cre"),
                      email = "terrytangyuan@gmail.com"),
               person(given = "Gao",
                      family = "Tao",
                      role = "aut",
                      email = "joegaotao@gmail.com"),
               person(given = "Xiao",
                      family = "Nan",
                      role = "aut",
                      email = "road2stat@gmail.com"))
as necessary.
checkRd: (-1) dca.Rd:24: Lost braces; missing escapes or markup?
    24 | \eqn{neglinks_{ij} = 1} means chunklet \code{i} and chunklet {j}
       |                                                              ^
checkRd: (-1) dca.Rd:26: Lost braces; missing escapes or markup?
    26 | \eqn{neglinks_{ij} = 0} means chunklet \code{i} and chunklet {j}
       |                                                              ^
checkRd: (-1) rca.Rd:57: Lost braces; missing escapes or markup?
    57 |       e.g. {1, 3, 7} and {4, 6}, might belong to the
       |            ^
checkRd: (-1) rca.Rd:57: Lost braces; missing escapes or markup?
    57 |       e.g. {1, 3, 7} and {4, 6}, might belong to the
       |                          ^
Maintainer: ‘Daniel Kaschek <daniel.kaschek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Kaschek",
                    role = c("aut", "cre"),
                    email = "daniel.kaschek@gmail.com")
as necessary.
checkRd: (-1) scale_color_dMod.Rd:10: Lost braces
    10 | \item{...}{arguments goint to code{scale_color_manual()}}
       |                                   ^
checkRd: (-1) scale_fill_dMod.Rd:10: Lost braces
    10 | \item{...}{arguments goint to code{scale_color_manual()}}
       |                                   ^
checkRd: (-1) trust.Rd:103: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:104: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:105: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:106: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:107-108: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:109-110: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:111-112: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:113-114: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:115-122: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:123-126: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:127: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:128-131: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:132-133: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:134-135: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:136-138: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:139-141: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
as.eventlist.html:56:1 (as.eventlist.Rd:18): Warning: missing </ul> before </div>
compile.html:63:1 (compile.Rd:19): Warning: missing </ul> before </div>
confint.parframe.html:64:1 (confint.parframe.Rd:19): Warning: missing </ul> before </div>
ggopen.html:54:1 (ggopen.Rd:14): Warning: missing </ul> before </div>
loadDLL.html:50:1 (loadDLL.Rd:10): Warning: missing </ul> before </div>
match.fnargs.html:50:1 (match.fnargs.Rd:12): Warning: missing </ul> before </div>
mname.html:62:1 (mname.Rd:24): Warning: missing </ul> before </div>
plotPars.html:58:1 (plotPars.Rd:18): Warning: missing </ul> before </div>
plotValues.html:59:1 (plotValues.Rd:19): Warning: missing </ul> before </div>
prdlist.html:62:1 (prdlist.Rd:21): Warning: missing </ul> before </div>
progressBar.html:54:1 (progressBar.Rd:14): Warning: missing </ul> before </div>
scale_fill_dMod.html:46:1 (scale_fill_dMod.Rd:10): Warning: missing </ul> before </div>
stat.parlist.html:46:1 (stat.parlist.Rd:10): Warning: missing </ul> before </div>
theme_dMod.html:50:1 (theme_dMod.Rd:12): Warning: missing </ul> before </div>
write.eqnlist.html:50:1 (write.eqnlist.Rd:12): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  EstimateDMQ.rd: DEoptim
  fn.DEoptim.Rd: DEoptim
  fn.solnp.Rd: solnp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
deprecated.html:269:1 (deprecated.Rd:253): Warning: missing </ul> before </div>
dm_from_src.html:94:1 (dm_from_src.Rd:36): Warning: missing </ul> before </div>
dm_has_fk.html:64:1 (dm_has_fk.Rd:19): Warning: missing </ul> before </div>
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) setCPT.O.Rd:85: Lost braces; missing escapes or markup?
    85 | statespace {0,1,2}, which this is *not* checked anywhere. Thus, if
       |            ^
Maintainer: ‘Hasinur Rahaman Khan <hasinurkhan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Faisal",
                      family = "Ababneh",
                      role = "aut"),
               person(given = "John",
                      family = "Robinson",
                      role = "aut"),
               person(given = c("Lars", "S"),
                      family = "Jermiin",
                      role = "aut"),
               person(given = c("Hasinur", "Rahaman"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "hasinurkhan@gmail.com"))
as necessary.
Maintainer: ‘Mikkel Meyer Andersen <mikl@math.aau.dk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
genRypeRec.html:64:1 (genRypeRec.Rd:18): Warning: missing </ul> before </div>
genTypeRec.html:58:1 (genTypeRec.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Qingyang Zhang <qz008@uark.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Qingyang",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "qz008@uark.edu")
as necessary.
Maintainer: ‘Jiayue Zeng <zengjiayue@126.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zhilong Jia <zhilongjia@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dnr.Rd:12: Escaped LaTeX specials: \#
checkRd: (-1) beetle.Rd:13: Lost braces; missing escapes or markup?
    13 |     \item{\code{x}}{dose (log base 10 CS2mgl^{-1})}
       |                                              ^
Found the following HTML validation problems:
cv_glm_fitlist.html:54:1 (cv_glm_fitlist.Rd:14): Warning: missing </ul> before </div>
dot-rhsf2list.html:46:1 (dot-rhsf2list.Rd:10): Warning: missing </ul> before </div>
generate_data_list.html:54:1 (generate_data_list.Rd:14): Warning: missing </ul> before </div>
get_formulas.html:54:1 (get_formulas.Rd:14): Warning: missing </ul> before </div>
linest-get.html:93:1 (linest-get.Rd:55): Warning: missing </ul> before </div>
mb_summary.html:64:1 (mb_summary.Rd:20): Warning: missing </ul> before </div>
model_stability_glm.html:68:1 (model_stability_glm.Rd:24): Warning: missing </ul> before </div>
tidy-esticon.html:59:1 (tidy-esticon.Rd:17): Warning: missing </ul> before </div>
tidy-linest.html:59:1 (tidy-linest.Rd:17): Warning: missing </ul> before </div>
truncate0.html:54:1 (truncate0.Rd:14): Warning: missing </ul> before </div>
vparse.html:47:1 (vparse.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mike Yeomans <mk.yeomans@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mike",
                    family = "Yeomans",
                    role = c("aut", "cre"),
                    email = "mk.yeomans@gmail.com")
as necessary.
Maintainer: ‘Jan Wijffels <jwijffels@bnosac.be>’

The Description field contains
  available at <arXiv:1405.4053>.  The package also provides an
  Topics' by D. Angelov available at <arXiv:2008.09470>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Ben Artin <ben@artins.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ben",
                    family = "Artin",
                    role = c("aut", "cre"),
                    email = "ben@artins.org")
as necessary.
Maintainer: ‘Andreas Rappold <arappold@gmx.at>’

Found the following (possibly) invalid file URIs:
  URI: ./misc/workflow.dot.pdf
    From: README.md
  URI: ./misc/nint.dot.pdf
    From: README.md
Maintainer: ‘Danail Obreschkow <danail.obreschkow@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Danail",
                    family = "Obreschkow",
                    role = c("aut", "cre"),
                    email = "danail.obreschkow@gmail.com")
as necessary.
Found the following HTML validation problems:
extract_annotations.html:50:1 (extract_annotations.Rd:12): Warning: missing </ul> before </div>
fix_path.html:46:1 (fix_path.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Carl Ganz <carl@cannadatasolutions.com>’

Found the following (possibly) invalid file URIs:
  URI: CONDUCT.md
    From: README.md
  URI: CONTRIBUTE.md
    From: README.md
Found the following HTML validation problems:
docu_auth.html:56:1 (docu_auth.Rd:16): Warning: missing </ul> before </div>
docu_header.html:46:1 (docu_header.Rd:10): Warning: missing </ul> before </div>
parse_response.html:46:1 (parse_response.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print.docx.html:51:1 (print.docx.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Elodie Persyn <elodie.persyn@univ-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Elodie",
                    family = "Persyn",
                    role = c("aut", "cre"),
                    email = "elodie.persyn@univ-nantes.fr")
as necessary.
Found the following HTML validation problems:
getEqualRowId.html:50:1 (getEqualRowId.Rd:12): Warning: missing </ul> before </div>
replaceTermsInString.html:50:1 (replaceTermsInString.Rd:12): Warning: missing </ul> before </div>
checkRd: (-1) py_select_interpreter.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Tell {reticulate} to use Python Conda version available on Domino Data Lab.}
       |             ^
Maintainer: ‘Nick Elprin <nick@dominodatalab.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jacek",
                      family = "Glodek",
                      role = "aut",
                      email = "jacek@theiterators.com"),
               person(given = "Nick",
                      family = "Elprin",
                      role = "cre",
                      email = "nick@dominodatalab.com"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘domino-package.Rd’:
    \keyword{domino,}
    \keyword{package,}
Found the following HTML validation problems:
domino.snapshot.html:46:1 (domino.snapshot.Rd:10): Warning: missing </ul> before </div>
domino.status.html:46:1 (domino.status.Rd:10): Warning: missing </ul> before </div>
domino.upload.html:47:1 (domino.upload.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
domir.html:281:1 (domir.Rd:234): Warning: <h5> anchor "Additional-Details" already defined
Found the following HTML validation problems:
cluster.html:52:1 (cluster.Rd:15): Warning: missing </ul> before </div>
Found the following calls to attach():
File ‘doParallel/R/doParallel.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Found the following HTML validation problems:
add_biocViews.html:50:1 (add_biocViews.Rd:12): Warning: missing </ul> before </div>
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    New features
Maintainer: ‘Paul Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Paul", "R."),
                      family = "Rosenbaum",
                      role = "aut"),
               person(given = "Paul",
                      family = "Rosenbaum",
                      role = "cre",
                      email = "rosenbaum@wharton.upenn.edu"))
as necessary.
Maintainer: ‘T. Schmelter <thomas.schmelter@bayer.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "F.",
                      family = "Mendolia",
                      role = "aut"),
               person(given = "K.",
                      family = "Walkamp",
                      role = "aut"),
               person(given = "K.",
                      family = "Roth",
                      role = "aut"),
               person(given = "T.",
                      family = "Schmelter",
                      role = c("aut", "cre"),
                      email = "thomas.schmelter@bayer.com"),
               person(given = "C.",
                      family = "Neumann",
                      role = "aut"),
               person(given = "Z.",
                      family = "Gao",
                      role = "aut"),
               person(given = "A.",
                      family = "Kaiser",
                      role = "aut"),
               person(given = "S.",
                      family = "Jeske",
                      role = "aut"),
               person(given = "H.",
                      family = "Kulmann",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
mvtnorm-control.html:60:1 (mvtnorm-control.Rd:17): Warning: missing </ul> before </div>
Found the following calls to attach():
File ‘doSNOW/R/doSNOW.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Maintainer: ‘Erik Thorsén <erik.thorsen@math.su.se>’

The Description field contains
  (<arXiv:2106.02131>).  Two dynamic shrinkage estimators are available
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Paul Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Paul", "R."),
                      family = "Rosenbaum",
                      role = "aut"),
               person(given = "Paul",
                      family = "Rosenbaum",
                      role = "cre",
                      email = "rosenbaum@wharton.upenn.edu"))
as necessary.
Maintainer: ‘Andrew Redd <Andrew.Redd@hsc.utah.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Redd",
                    role = c("aut", "cre"),
                    email = "Andrew.Redd@hsc.utah.edu")
as necessary.
Found the following HTML validation problems:
capply.html:58:1 (capply.Rd:16): Warning: missing </ul> before </div>
fill_v.html:58:1 (fill_v.Rd:16): Warning: missing </ul> before </div>
head-tail-utils.Rd.html:56:1 (head-tail-utils.Rd.Rd:17): Warning: missing </ul> before </div>
listrows.html:46:1 (listrows.Rd:10): Warning: missing </ul> before </div>
make_new_id.html:46:1 (make_new_id.Rd:10): Warning: missing </ul> before </div>
redirf.html:51:1 (redirf.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jean-Mathieu Potvin <jm@potvin.xyz>’

The BugReports field in DESCRIPTION has
  https://github.com/jeanmathieupotvin/dotprofile/issues/new
which should likely be
  https://github.com/jeanmathieupotvin/dotprofile/issues/new/issues
instead.
Maintainer: ‘E. F. Haghish <haghish@imbi.uni-freiburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("E.", "F."),
                    family = "Haghish",
                    role = c("aut", "cre"),
                    email = "haghish@imbi.uni-freiburg.de")
as necessary.

The BugReports field in DESCRIPTION has
  http://github.com/haghish/DOT
which should likely be
  http://github.com/haghish/DOT/issues
instead.
Found the following files/directories:
  ‘myfile.ps’ ‘myfile.svg’
Maintainer: ‘James McVittie <james.mcvittie@mail.mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "James",
                    family = "McVittie",
                    role = c("aut", "cre"),
                    email = "james.mcvittie@mail.mcgill.ca")
as necessary.
Maintainer: ‘Mary C Meyer <meyer@stat.colostate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mary", "C"),
                      family = "Meyer",
                      role = c("aut", "cre"),
                      email = "meyer@stat.colostate.edu"),
               person(given = "Bodhisattva",
                      family = "Sen",
                      role = "aut"))
as necessary.

Found the following (possibly) invalid file URI:
  URI: www.kentuckyderby.com
    From: man/derby.Rd
Maintainer: ‘Sean Ruddy <s.ruddy@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sean",
                    family = "Ruddy",
                    role = c("aut", "cre"),
                    email = "s.ruddy@yahoo.com")
as necessary.
Maintainer: ‘Maria Dolores Martinez-Miranda <mmiranda@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "M.L.",
                      family = "Gamiz",
                      role = "aut"),
               person(given = "E.",
                      family = "Mammen",
                      role = "aut"),
               person(given = "M.D.",
                      family = "Martinez-Miranda",
                      role = "aut"),
               person(given = "J.P.",
                      family = "Nielsen",
                      role = "aut"),
               person(given = c("Maria", "Dolores"),
                      family = "Martinez-Miranda",
                      role = "cre",
                      email = "mmiranda@ugr.es"))
as necessary.
Maintainer: ‘Dinesh Acharya <dines.acharya@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dinesh",
                    family = "Acharya",
                    role = c("aut", "cre"),
                    email = "dines.acharya@gmail.com")
as necessary.
Found the following HTML validation problems:
exportTrees.html:59:1 (exportTrees.Rd:17): Warning: missing </ul> before </div>
writeCloneSequences.html:52:1 (writeCloneSequences.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
show-dparserFunction-method.html:47:1 (show-dparserFunction-method.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Bingyuan Zhang <zhang@sigmath.es.osaka-u.ac.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bingyuan",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zhang@sigmath.es.osaka-u.ac.jp"),
               person(given = "Jie",
                      family = "Chen",
                      role = "aut"),
               person(given = "Yoshikazu",
                      family = "Terada",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
S3method.dpi.html:108:1 (S3method.dpi.Rd:35): Warning: missing </ul> before </div>
Maintainer: ‘Harry Joo <harryjoo19@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Harry",
                      family = "Joo",
                      role = c("aut", "cre"),
                      email = "harryjoo19@gmail.com"),
               person(given = "Herman",
                      family = "Aguinis",
                      role = c("aut", "dtc")),
               person(given = c("Kyle", "J."),
                      family = "Bradley",
                      role = "aut"),
               person(given = "Takuya",
                      family = "Noguchi",
                      role = "ctb"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dpkg_release_gh.R’ ‘read_dpkg.Rd’ ‘stow.R’ ‘stow.Rd’
File ‘dplyr/libs/dplyr.so’:
  Found non-API calls to R: ‘LEVELS’, ‘OBJECT’, ‘PRVALUE’,
    ‘R_shallow_duplicate_attr’, ‘Rf_allocSExp’, ‘SET_PRCODE’,
    ‘SET_PRENV’, ‘SET_PRVALUE’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
add_rownames.html:51:1 (add_rownames.Rd:12): Warning: missing </ul> before </div>
args_by.html:44:1 (args_by.Rd:11): Warning: missing </ul> before </div>
auto_copy.html:57:1 (auto_copy.Rd:17): Warning: missing </ul> before </div>
dplyr_by.html:294:1 (dplyr_by.Rd:224): Warning: missing </ul> before </div>
grouped_df.html:64:1 (grouped_df.Rd:20): Warning: missing </ul> before </div>
last_dplyr_warnings.html:51:1 (last_dplyr_warnings.Rd:11): Warning: missing </ul> before </div>
make_tbl.html:54:1 (make_tbl.Rd:15): Warning: missing </ul> before </div>
se-deprecated.html:163:1 (se-deprecated.Rd:106): Warning: missing </ul> before </div>
sql.html:49:1 (sql.Rd:11): Warning: missing </ul> before </div>
src.html:60:1 (src.Rd:21): Warning: missing </ul> before </div>
src_local.html:55:1 (src_local.Rd:16): Warning: missing </ul> before </div>
src_tbls.html:52:1 (src_tbls.Rd:12): Warning: missing </ul> before </div>
tbl.html:56:1 (tbl.Rd:17): Warning: missing </ul> before </div>
tbl_df.html:49:1 (tbl_df.Rd:13): Warning: missing </ul> before </div>
with_order.html:54:1 (with_order.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘David J. H. Shih <djh.shih@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yanxun",
                      family = "Xu",
                      role = "aut"),
               person(given = "Peter",
                      family = "Mueller",
                      role = "aut"),
               person(given = "Donatello",
                      family = "Telesca",
                      role = "aut"),
               person(given = c("David", "J.", "H."),
                      family = "Shih",
                      role = c("aut", "cre"),
                      email = "djh.shih@gmail.com"))
as necessary.
'library' or 'require' call not declared from: ‘devtools’
Found the following HTML validation problems:
estimate.html:54:1 (estimate.Rd:14): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:182:1 (inst/NEWS.Rd:100): Warning: missing </ul> before </div>
NEWS.html:84:1 (inst/NEWS.Rd:44): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:103:1 (inst/NEWS.Rd:55): Warning: <h4> anchor "Misc" already defined
NEWS.html:118:1 (inst/NEWS.Rd:63): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:135:1 (inst/NEWS.Rd:73): Warning: <h4> anchor "NEW-FEATURES" already defined
Found the following HTML validation problems:
dchisqApprox.html:126:1 (dchisqApprox.Rd:81): Warning: <h3> anchor "_sec_note" already defined
Found the following HTML validation problems:
print.dpseg.html:53:1 (print.dpseg.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
DPTM.html:366:1 (DPTM.Rd:232): Warning: missing </ul> before </div>
DPTM.html:161:1 (DPTM.Rd:99): Warning: <h5> anchor "Usage" already defined
DPTM.html:176:1 (DPTM.Rd:112): Warning: <h5> anchor "Arguments" already defined
DPTM.html:213:1 (DPTM.Rd:139): Warning: <h5> anchor "Usage" already defined
DPTM.html:219:1 (DPTM.Rd:143): Warning: <h5> anchor "Arguments" already defined
DPTM.html:242:1 (DPTM.Rd:156): Warning: <h5> anchor "Usage" already defined
DPTM.html:248:1 (DPTM.Rd:160): Warning: <h5> anchor "Arguments" already defined
DPTM.html:271:1 (DPTM.Rd:173): Warning: <h5> anchor "Usage" already defined
DPTM.html:283:1 (DPTM.Rd:183): Warning: <h5> anchor "Arguments" already defined
DPTM.html:314:1 (DPTM.Rd:204): Warning: <h5> anchor "Usage" already defined
DPTM.html:320:1 (DPTM.Rd:208): Warning: <h5> anchor "Arguments" already defined
DPTM.html:343:1 (DPTM.Rd:221): Warning: <h5> anchor "Usage" already defined
DPTM.html:349:1 (DPTM.Rd:225): Warning: <h5> anchor "Arguments" already defined
Found the following HTML validation problems:
check_load_data_button.html:55:1 (check_load_data_button.Rd:12): Warning: missing </ul> before </div>
set_target_equal_to_source.html:47:1 (set_target_equal_to_source.Rd:10): Warning: missing </ul> before </div>
validate_inputs.html:60:1 (validate_inputs.Rd:17): Warning: missing </ul> before </div>
Found the following HTML validation problems:
load_sqls.html:51:1 (load_sqls.Rd:13): Warning: missing </ul> before </div>
checkRd: (-1) confint.dr4pl.Rd:49: Escaped LaTeX specials: \&
checkRd: (-1) gof-dr4pl.Rd:40: Escaped LaTeX specials: \&
checkRd: (-1) vcov.dr4pl.Rd:61: Escaped LaTeX specials: \&
Found the following HTML validation problems:
calculate.dr4pl.html:59:1 (calculate.dr4pl.Rd:16): Warning: missing </ul> before </div>
dr4pl-augment.html:55:1 (dr4pl-augment.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
canvas.html:114:1 (canvas.Rd:63): Warning: <h4> anchor "height" already defined
Maintainer: ‘Richard Wen <rrwen.dev@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Richard",
                    family = "Wen",
                    role = c("aut", "cre"),
                    email = "rrwen.dev@gmail.com")
as necessary.
Found the following files/directories:
  ‘drawBox.pdf’ ‘drawCircle.pdf’ ‘drawCurve.pdf’ ‘drawLine.pdf’
  ‘drawPoint.pdf’ ‘drawSettingsExample.pdf’ ‘drawText.pdf’ ‘export.pdf’
Maintainer: ‘Kubra Atalay Kabasakal <katalay@hacettepe.edu.tr>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Martin Wiegand <Martin.Wiegand@manchester.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Martin",
                    family = "Wiegand",
                    role = c("aut", "cre"),
                    email = "martin.wiegand@manchester.ac.uk")
as necessary.
Maintainer: ‘Christian Ritz <ritz@bioassay.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christian",
                      family = "Ritz",
                      role = c("aut", "cre"),
                      email = "ritz@bioassay.dk"),
               person(given = c("Jens", "C."),
                      family = "Strebig",
                      role = "aut",
                      email = "streibig@bioassay.dk"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) EDcomp.Rd:88: Escaped LaTeX specials: \&
checkRd: (-1) LL.4.Rd:44: Escaped LaTeX specials: \&
checkRd: (-1) W4.Rd:37: Escaped LaTeX specials: \&
checkRd: (-1) algae.Rd:32: Escaped LaTeX specials: \&
checkRd: (-1) anova.drc.Rd:40: Escaped LaTeX specials: \&
checkRd: (-1) deguelin.Rd:33: Escaped LaTeX specials: \&
checkRd: (-1) gompertz.Rd:55: Escaped LaTeX specials: \&
checkRd: (-1) hatvalues.drc.Rd:43: Lost braces
    43 |   emph{Generalized Linear Models}, 
       |       ^
checkRd: (-1) hatvalues.drc.Rd:44: Escaped LaTeX specials: \&
checkRd: (-1) llogistic.Rd:64: Escaped LaTeX specials: \&
checkRd: (-1) modelFit.Rd:36: Escaped LaTeX specials: \&
checkRd: (-1) weibull1.Rd:67: Escaped LaTeX specials: \&
Maintainer: ‘Andrea Onofri <andrea.onofri@unipg.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrea",
                    family = "Onofri",
                    role = c("aut", "cre"),
                    email = "andrea.onofri@unipg.it")
as necessary.
checkRd: (-1) excalibur.Rd:18: Lost braces; missing escapes or markup?
    18 |     \item{\code{GR}}{a numeric vector: germination rates in d^{-1}}
       |                                                               ^
checkRd: (-1) festuca.Rd:16: Lost braces; missing escapes or markup?
    16 |     \item{\code{GR}}{a numeric vector: germination rates in d^{-1}}
       |                                                               ^
Found the following HTML validation problems:
internal-Functions.html:60:1 (internal-Functions.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Katharina Baum <katharina.baum@hpi.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) generate_individual_graphs.Rd:11: Lost braces
    11 | code{\link[DrDimont]{compute_correlation_matrices}}}
       |     ^
Error(s) in re-building vignettes:
  ...
--- re-building ‘DrDimont_Vignette.Rmd’ using rmarkdown

Quitting from DrDimont_Vignette.Rmd:327-333 [Individual graphs]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DrDimont_Vignette.Rmd' failed with diagnostics:
Cannot create a graph object because the adjacency matrix contains NAs.
--- failed re-building ‘DrDimont_Vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘DrDimont_Vignette.Rmd’

Error: Vignette re-building failed.
Execution halted
Maintainer: ‘Loris Michel <michel@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Loris",
                      family = "Michel",
                      role = c("aut", "cre"),
                      email = "michel@stat.math.ethz.ch"),
               person(given = "Domagoj",
                      family = "Cevid",
                      role = "aut"))
as necessary.

The Description field contains
  Cevid & Michel & Meinshausen & Buhlmann (2020) <arXiv:2005.14458>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) predict.drf.Rd:30-31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:32-33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:34-35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:36-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:38-39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:40-41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:42-43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:44: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
create_dot_body.html:54:1 (create_dot_body.Rd:14): Warning: missing </ul> before </div>
export_graphviz.html:50:1 (export_graphviz.Rd:12): Warning: missing </ul> before </div>
leaf_stats.default.html:57:1 (leaf_stats.default.Rd:15): Warning: missing </ul> before </div>
plot.drf_tree.html:51:1 (plot.drf_tree.Rd:12): Warning: missing </ul> before </div>
print.drf.html:59:1 (print.drf.Rd:16): Warning: missing </ul> before </div>
print.drf_tree.html:51:1 (print.drf_tree.Rd:12): Warning: missing </ul> before </div>
weighted.quantile.html:58:1 (weighted.quantile.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Alvaro Briz-Redon <alvaro.briz@uv.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alvaro",
                    family = "Briz-Redon",
                    role = c("aut", "cre"),
                    email = "alvaro.briz@uv.es")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘goodmap.R’ ‘traits.R’
Maintainer: ‘Emil Sjoerup <emilsjoerup@live.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emil",
                    family = "Sjoerup",
                    role = c("aut", "cre"),
                    email = "emilsjoerup@live.dk")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DriftBurstHypothesis.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Przemyslaw Biecek <przemyslaw.biecek@gmail.com>’

The Description field contains
  of the 'DrWhy.AI' universe (Biecek 2018) <arXiv:1806.08915>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hanbing Yang <hanbingflying@sina.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hanbing",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "hanbingflying@sina.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Il-Youp Kwak <ilyoup.kwak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Il-Youp", "Kwak", "with", "contributions", "from", "Wuming"),
                      family = "Gong",
                      role = "aut"),
               person(given = "Il-Youp",
                      family = "Kwak",
                      role = "cre",
                      email = "ilyoup.kwak@gmail.com"))
as necessary.
Found the following HTML validation problems:
eif_pmf_k.html:70:1 (eif_pmf_k.Rd:23): Warning: missing </ul> before </div>
eif_theta_k.html:70:1 (eif_theta_k.Rd:23): Warning: missing </ul> before </div>
estimate_eif_wmean.html:75:1 (estimate_eif_wmean.Rd:30): Warning: missing </ul> before </div>
fit_trt_spec_reg.html:121:1 (fit_trt_spec_reg.Rd:59): Warning: missing </ul> before </div>
getResponseFromFormula.html:50:1 (getResponseFromFormula.Rd:12): Warning: missing </ul> before </div>
get_one_wmean.html:95:1 (get_one_wmean.Rd:45): Warning: missing </ul> before </div>
marginalize_cdf.html:48:1 (marginalize_cdf.Rd:11): Warning: missing </ul> before </div>
marginalize_pmf.html:48:1 (marginalize_pmf.Rd:11): Warning: missing </ul> before </div>
print.drord.html:56:1 (print.drord.Rd:15): Warning: missing </ul> before </div>
trimmed_logit.html:46:1 (trimmed_logit.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Zengchao Hao <z.hao4univ@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zengchao",
                    family = "Hao",
                    role = c("aut", "cre"),
                    email = "z.hao4univ@gmail.com")
as necessary.
Maintainer: ‘Manjari Das <manjari8d@gmail.com>’

The Description field contains
  Kennedy EH, and Jewell NP (2021) <arXiv:2104.14091>. The estimator is
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) popsize.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
optimal_bias_generic.html:84:1 (optimal_bias_generic.Rd:36): Warning: missing </ul> before </div>
optimal_binary_generic.html:205:1 (optimal_binary_generic.Rd:111): Warning: missing </ul> before </div>
optimal_generic.html:86:1 (optimal_generic.Rd:30): Warning: missing </ul> before </div>
optimal_multiarm_generic.html:128:1 (optimal_multiarm_generic.Rd:60): Warning: missing </ul> before </div>
optimal_normal_generic.html:209:1 (optimal_normal_generic.Rd:113): Warning: missing </ul> before </div>
optimal_tte_generic.html:200:1 (optimal_tte_generic.Rd:104): Warning: missing </ul> before </div>
Found the following HTML validation problems:
get_mode.html:50:1 (get_mode.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cdmDoc.html:40:1 (cdmDoc.Rd:7): Warning: missing </ul> before </div>
censorDateDoc.html:41:1 (censorDateDoc.Rd:8): Warning: missing </ul> before </div>
cohortDoc.html:40:1 (cohortDoc.Rd:7): Warning: missing </ul> before </div>
cohortIdDoc.html:41:1 (cohortIdDoc.Rd:8): Warning: missing </ul> before </div>
compNameDoc.html:41:1 (compNameDoc.Rd:8): Warning: missing </ul> before </div>
conceptSetDoc.html:40:1 (conceptSetDoc.Rd:7): Warning: missing </ul> before </div>
daysPrescribedDoc.html:41:1 (daysPrescribedDoc.Rd:8): Warning: missing </ul> before </div>
drugUtilisationDoc.html:94:1 (drugUtilisationDoc.Rd:40): Warning: missing </ul> before </div>
gapEraDoc.html:41:1 (gapEraDoc.Rd:8): Warning: missing </ul> before </div>
indexDateDoc.html:41:1 (indexDateDoc.Rd:8): Warning: missing </ul> before </div>
ingredientConceptIdDoc.html:41:1 (ingredientConceptIdDoc.Rd:8): Warning: missing </ul> before </div>
nameStyleDoc.html:40:1 (nameStyleDoc.Rd:7): Warning: missing </ul> before </div>
newNameDoc.html:41:1 (newNameDoc.Rd:8): Warning: missing </ul> before </div>
numberExposuresDoc.html:41:1 (numberExposuresDoc.Rd:8): Warning: missing </ul> before </div>
plotDoc.html:47:1 (plotDoc.Rd:12): Warning: missing </ul> before </div>
restrictIncidentDoc.html:42:1 (restrictIncidentDoc.Rd:9): Warning: missing </ul> before </div>
resultDoc.html:40:1 (resultDoc.Rd:7): Warning: missing </ul> before </div>
strataDoc.html:41:1 (strataDoc.Rd:8): Warning: missing </ul> before </div>
tableDoc.html:62:1 (tableDoc.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ravi",
                      family = "Varadhan",
                      role = c("aut", "cre"),
                      email = "ravi.varadhan@jhu.edu"),
               person(given = "Wenliang",
                      family = "Yao",
                      role = "aut"))
as necessary.
Error(s) in re-building vignettes:
  ...
--- re-building ‘additional_topics.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘additional_topics.Rmd’

--- re-building ‘end_to_end_workflow.rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘end_to_end_workflow.rmd’

--- re-building ‘fastkm.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘fastkm.Rmd’

--- re-building ‘no_empty_drops.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘no_empty_drops.Rmd’

--- re-building ‘understanding_dsb.Rmd’ using rmarkdown

Quitting from understanding_dsb.Rmd:75-104 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'understanding_dsb.Rmd' failed with diagnostics:
Problem while computing stat.
ℹ Error occurred in the 2nd layer.
Caused by error in `compute_layer()`:
! The package "MASS" is required for calculating 2D density.
--- failed re-building ‘understanding_dsb.Rmd’

SUMMARY: processing the following file failed:
  ‘understanding_dsb.Rmd’

Error: Vignette re-building failed.
Execution halted
File ‘dsdp/libs/dsdp.so’:
  Found non-API call to R: ‘Rf_allocSExp’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
DSLoginBuilder.html:217:1 (DSLoginBuilder.Rd:125): Warning: missing </ul> before </div>
DSLoginBuilder.html:113:1 (DSLoginBuilder.Rd:55): Warning: <h5> anchor "Usage" already defined
DSLoginBuilder.html:130:1 (DSLoginBuilder.Rd:70): Warning: <h5> anchor "Arguments" already defined
DSLoginBuilder.html:171:1 (DSLoginBuilder.Rd:101): Warning: <h5> anchor "Usage" already defined
DSLoginBuilder.html:177:1 (DSLoginBuilder.Rd:105): Warning: <h5> anchor "Returns" already defined
DSLoginBuilder.html:194:1 (DSLoginBuilder.Rd:114): Warning: <h5> anchor "Usage" already defined
DSLoginBuilder.html:200:1 (DSLoginBuilder.Rd:118): Warning: <h5> anchor "Arguments" already defined
datashield.logout.html:50:1 (datashield.logout.Rd:12): Warning: missing </ul> before </div>
datashield.pkg_check.html:64:1 (datashield.pkg_check.Rd:22): Warning: missing </ul> before </div>
datashield.rm.html:50:1 (datashield.rm.Rd:12): Warning: missing </ul> before </div>
datashield.symbols.html:46:1 (datashield.symbols.Rd:10): Warning: missing </ul> before </div>
datashield.workspace_restore.html:52:1 (datashield.workspace_restore.Rd:12): Warning: missing </ul> before </div>
datashield.workspace_rm.html:50:1 (datashield.workspace_rm.Rd:12): Warning: missing </ul> before </div>
datashield.workspace_save.html:51:1 (datashield.workspace_save.Rd:12): Warning: missing </ul> before </div>
datashield.workspaces.html:46:1 (datashield.workspaces.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
get_data.html:46:1 (get_data.Rd:10): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
dsAggregate-ArmadilloConnection-method.html:60:1 (dsAggregate-ArmadilloConnection-method.Rd:17): Warning: missing </ul> before </div>
dsRmSymbol-ArmadilloConnection-method.html:53:1 (dsRmSymbol-ArmadilloConnection-method.Rd:12): Warning: missing </ul> before </div>
dsRmWorkspace-ArmadilloConnection-method.html:51:1 (dsRmWorkspace-ArmadilloConnection-method.Rd:12): Warning: missing </ul> before </div>
dsSaveWorkspace-ArmadilloConnection-method.html:51:1 (dsSaveWorkspace-ArmadilloConnection-method.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dsm.cor.html:96:1 (dsm.cor.Rd:44): Warning: missing </ul> before </div>
dsm.var.gam.html:76:1 (dsm.var.gam.Rd:32): Warning: missing </ul> before </div>
dsm.var.movblk.html:104:1 (dsm.var.movblk.Rd:50): Warning: missing </ul> before </div>
dsm.var.prop.html:76:1 (dsm.var.prop.Rd:32): Warning: missing </ul> before </div>
rqgam.check.html:51:1 (rqgam.check.Rd:13): Warning: missing </ul> before </div>
vis.concurvity.html:50:1 (vis.concurvity.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-datashield.command.html:54:1 (dot-datashield.command.Rd:14): Warning: missing </ul> before </div>
dot-datashield.command_result.html:55:1 (dot-datashield.command_result.Rd:14): Warning: missing </ul> before </div>
dot-datashield.command_rm.html:50:1 (dot-datashield.command_rm.Rd:12): Warning: missing </ul> before </div>
dot-datashield.commands.html:46:1 (dot-datashield.commands.Rd:10): Warning: missing </ul> before </div>
dot-datashield.commands_rm.html:46:1 (dot-datashield.commands_rm.Rd:10): Warning: missing </ul> before </div>
dot-datashield.methods.html:50:1 (dot-datashield.methods.Rd:12): Warning: missing </ul> before </div>
dot-datashield.profiles.html:46:1 (dot-datashield.profiles.Rd:10): Warning: missing </ul> before </div>
dot-datashield.rm.html:50:1 (dot-datashield.rm.Rd:12): Warning: missing </ul> before </div>
dot-datashield.symbols.html:46:1 (dot-datashield.symbols.Rd:10): Warning: missing </ul> before </div>
dot-datashield.workspace_restore.html:50:1 (dot-datashield.workspace_restore.Rd:12): Warning: missing </ul> before </div>
dot-datashield.workspace_rm.html:50:1 (dot-datashield.workspace_rm.Rd:12): Warning: missing </ul> before </div>
dot-datashield.workspace_save.html:50:1 (dot-datashield.workspace_save.Rd:12): Warning: missing </ul> before </div>
dot-datashield.workspaces.html:46:1 (dot-datashield.workspaces.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Vathy M. Kamulete <vathymut@gmail.com>’

The Description field contains
  <arXiv:1908.04000>. Modern notions of outlyingness such as trust scores
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Alberto Almuiña <albertogonzalezalmuinha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alberto",
                    family = "Almuiña",
                    role = c("aut", "cre"),
                    email = "albertogonzalezalmuinha@gmail.com")
as necessary.
Found the following HTML validation problems:
getARpXmat.html:54:1 (getARpXmat.Rd:14): Warning: missing </ul> before </div>
initCholReg_spam.html:60:1 (initCholReg_spam.Rd:16): Warning: missing </ul> before </div>
initChol_spam.html:52:1 (initChol_spam.Rd:12): Warning: missing </ul> before </div>
sample_mat_c.html:74:1 (sample_mat_c.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Emmanuel Arnhold <emmanuelarnhold@yahoo.com.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emmanuel",
                    family = "Arnhold",
                    role = c("aut", "cre"),
                    email = "emmanuelarnhold@yahoo.com.br")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Michael Nelson <michael.nelson.r.pkg@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Nelson",
                    role = c("aut", "cre"),
                    email = "michael.nelson.r.pkg@gmail.com")
as necessary.
Maintainer: ‘Phillip D. Alderman <phillip.alderman@okstate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Phillip", "D."),
                    family = "Alderman",
                    role = c("aut", "cre"),
                    email = "phillip.alderman@okstate.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘v_fmt_to_type.R’
Found the following HTML validation problems:
calc_AMP.html:48:1 (calc_AMP.Rd:12): Warning: missing </ul> before </div>
calc_TAV.html:48:1 (calc_TAV.Rd:12): Warning: missing </ul> before </div>
clear_output.html:52:1 (clear_output.Rd:13): Warning: missing </ul> before </div>
read_filex_multiple.html:82:1 (read_filex_multiple.Rd:36): Warning: missing </ul> before </div>
write_dssbatch.data.frame.html:58:1 (write_dssbatch.data.frame.Rd:17): Warning: missing </ul> before </div>
write_dssbatch.default.html:58:1 (write_dssbatch.default.Rd:17): Warning: missing </ul> before </div>
write_dssbatch.tbl_df.html:58:1 (write_dssbatch.tbl_df.Rd:17): Warning: missing </ul> before </div>
write_filex.html:61:1 (write_filex.Rd:19): Warning: missing </ul> before </div>
write_wth.html:120:1 (write_wth.Rd:58): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.Coverage.Grid-methods.html:56:1 (plot.Coverage.Grid-methods.Rd:15): Warning: missing </ul> before </div>
plot.Survey.Design-methods.html:70:1 (plot.Survey.Design-methods.Rd:21): Warning: missing </ul> before </div>
plot.Transect-methods.html:60:1 (plot.Transect-methods.Rd:19): Warning: missing </ul> before </div>
show.Survey.Design-methods.html:47:1 (show.Survey.Design-methods.Rd:10): Warning: missing </ul> before </div>
show.Transect-methods.html:52:1 (show.Transect-methods.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Gentry White <gentry.white@qut.edu.au>’

The Description field contains
  in G. White, D. Sun, P. Speckman (2019) <arXiv:1906.05575>. The basic
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DSSP.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
Maintainer: ‘Zhibing He <zhibingh@asu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zhibing",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "zhibingh@asu.edu")
as necessary.
Maintainer: ‘Seunggeun (Shawn) Lee <leeshawn@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Seunggeun",
                      family = "Lee",
                      role = "aut",
                      comment = "Shawn"),
               person(given = "Seunggeun",
                      family = "Lee",
                      role = "cre",
                      email = "leeshawn@umich.edu",
                      comment = "Shawn"))
as necessary.
Found the following HTML validation problems:
combine_Y_refs.html:66:1 (combine_Y_refs.Rd:26): Warning: missing </ul> before </div>
get_gamma.html:50:1 (get_gamma.Rd:14): Warning: missing </ul> before </div>
process_markers.html:114:1 (process_markers.Rd:57): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as_d3_data-DE-method.html:51:1 (as_d3_data-DE-method.Rd:13): Warning: missing </ul> before </div>
plot-DE-missing-method.html:60:1 (plot-DE-missing-method.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Zhicheng Du <dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
checkRd: (-1) DTDAcif.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Carla Moreira <carlamgmm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Carla",
                      family = "Moreira",
                      role = c("aut", "cre"),
                      email = "carlamgmm@gmail.com"),
               person(given = "Jacobo",
                      family = "de Uña-Álvarez",
                      role = "aut"),
               person(given = "Rosa",
                      family = "Crujeiras",
                      role = "aut"))
as necessary.
checkRd: (-1) efron.petrosian.Rd:22: Lost braces
    22 |   \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                               ^
checkRd: (-1) lynden.Rd:21: Lost braces
    21 |    \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                                ^
checkRd: (-1) shen.Rd:24: Lost braces
    24 |   \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                               ^
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DtD.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘William Nicholson<wbnicholson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "William",
                    family = "Nicholson",
                    role = c("aut", "cre"),
                    email = "wbnicholson@gmail.com")
as necessary.
checkRd: (-1) applied_crm.Rd:64: Lost braces; missing escapes or markup?
    64 | The empiric model is specified as F(d, beta) = d^{exp(beta)}. The logistic model is
       |                                                  ^
Maintainer: ‘Taha Zaghdoudi <zedtaha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Taha",
                    family = "Zaghdoudi",
                    role = c("aut", "cre"),
                    email = "zedtaha@gmail.com")
as necessary.
checkRd: (-1) Mena.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:19: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Yuan Chen <irene.yuan.chen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuan",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "irene.yuan.chen@gmail.com"),
               person(given = "Ying",
                      family = "Liu",
                      role = "aut"),
               person(given = "Donglin",
                      family = "Zeng",
                      role = "aut"),
               person(given = "Yuanjia",
                      family = "Wang",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
params.html:139:1 (params.Rd:60): Warning: missing </ul> before </div>
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = c("aut", "cre"),
                      email = "edd@debian.org"),
               person(given = "Leonardo",
                      family = "Silvestri",
                      role = "aut"))
as necessary.
Maintainer: ‘Emilie Poisson-Caillault <emilie.poisson@univ-littoral.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Camille",
                      family = "Dezecache",
                      role = "aut"),
               person(given = c("T.", "T.", "Hong"),
                      family = "Phan",
                      role = "aut"),
               person(given = "Emilie",
                      family = "Poisson-Caillault",
                      role = c("aut", "cre"),
                      email = "emilie.poisson@univ-littoral.fr"))
as necessary.
Maintainer: ‘Alexis Sarda <alexis.sarda@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alexis",
                      family = "Sarda-Espinosa",
                      role = "aut"),
               person(given = "Alexis",
                      family = "Sarda",
                      role = "cre",
                      email = "alexis.sarda@gmail.com"))
as necessary.
Found the following HTML validation problems:
DistmatLowerTriangular-generics.html:66:1 (DistmatLowerTriangular-generics.Rd:24): Warning: missing </ul> before </div>
explore__plot.html:54:1 (explore__plot.Rd:14): Warning: missing </ul> before </div>
parse_input.html:50:1 (parse_input.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Toni Giorgino <toni.giorgino@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘POISSON-CAILLAULT Emilie <emilie.poisson@univ-littoral.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "DEZECACHE",
                      family = "Camille",
                      role = "aut"),
               person(given = c("PHAN", "Thi", "Thu"),
                      family = "Hong",
                      role = "aut"),
               person(given = "POISSON-CAILLAULT",
                      family = "Emilie",
                      role = c("aut", "cre"),
                      email = "emilie.poisson@univ-littoral.fr"))
as necessary.
checkRd: (-1) DTWUMI_1gap_imputation.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
duckdb_secrets.html:100:1 (duckdb_secrets.Rd:44): Warning: missing </ul> before </div>
to_geojson.html:60:1 (to_geojson.Rd:18): Warning: missing </ul> before </div>
to_json.html:71:1 (to_json.Rd:26): Warning: missing </ul> before </div>
Found the following significant warnings:
  /usr/include/c++/15/bits/move.h:235:11: warning: ‘((std::remove_reference<long unsigned int&>::type*)this)[2]’ is used uninitialized [-Wuninitialized]
  /usr/include/c++/15/bits/move.h:235:11: warning: ‘((std::remove_reference<long int&>::type*)this)[2]’ is used uninitialized [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/duckdb.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Found the following HTML validation problems:
duckdb_connection-class.html:176:1 (duckdb_connection-class.Rd:138): Warning: missing </ul> before </div>
duckdb_driver-class.html:64:1 (duckdb_driver-class.Rd:32): Warning: missing </ul> before </div>
duckdb_result-class.html:112:1 (duckdb_result-class.Rd:83): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘scale_duke_color_discrete.Rd’ ‘scale_duke_fill_discrete.Rd’
Running ‘testthat.R’ [5s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > library(duke)
  > 
  > test_check("duke")
  New names:
  * `colour` -> `colour...1`
  * `colour` -> `colour...4`
  [ FAIL 1 | WARN 10 | SKIP 0 | PASS 27 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-scale_duke_fill_discrete.R:36:3'): appropriate fill for factors over 8-levels ──
  ggplot2::layer_data(p3)$fill[9] (`actual`) not equal to "#B5B5B5" (`expected`).
  
  `actual`:   NA       
  `expected`: "#B5B5B5"
  Backtrace:
      ▆
   1. ├─testthat::expect_warning(...) at test-scale_duke_fill_discrete.R:36:3
   2. │ └─testthat:::expect_condition_matching(...)
   3. │   └─testthat:::quasi_capture(...)
   4. │     ├─testthat (local) .capture(...)
   5. │     │ └─base::withCallingHandlers(...)
   6. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
   7. └─testthat::expect_equal(ggplot2::layer_data(p3)$fill[9], "#B5B5B5")
  
  [ FAIL 1 | WARN 10 | SKIP 0 | PASS 27 ]
  Error: Test failures
  Execution halted
Maintainer: ‘Foo Cheung <foocheung@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Foo",
                    family = "Cheung",
                    role = c("aut", "cre"),
                    email = "foocheung@yahoo.com")
as necessary.
Maintainer: ‘Michel Ballings <michel.ballings@GMail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michel",
                      family = "Ballings",
                      role = c("aut", "cre"),
                      email = "michel.ballings@gmail.com"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Maintainer: ‘Alexis Dinno <alexis.dinno@pdx.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexis",
                    family = "Dinno",
                    role = c("aut", "cre"),
                    email = "alexis.dinno@pdx.edu")
as necessary.
Found the following HTML validation problems:
initialize-Counts-method.html:55:1 (initialize-Counts-method.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Juan Julián Merelo-Guervós <jjmerelo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Juan", "Julián"),
                    family = "Merelo-Guervós",
                    role = c("aut", "cre"),
                    email = "jjmerelo@gmail.com")
as necessary.
Maintainer: ‘Russ Hyde <russ.hyde.data@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Russ",
                      family = "Hyde",
                      role = c("aut", "cre"),
                      email = "russ.hyde.data@gmail.com"),
               person(given = c("University", "of"),
                      family = "Glasgow",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
as.data.frame.dups.html:51:1 (as.data.frame.dups.Rd:12): Warning: missing </ul> before </div>
as_tibble.dups.html:52:1 (as_tibble.dups.Rd:13): Warning: missing </ul> before </div>
print.dups.html:51:1 (print.dups.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
psa_data.html:62:1 (psa_data.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Dane R. Van Domelen <vandomed@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dane", "R."),
                    family = "Van Domelen",
                    role = c("aut", "cre"),
                    email = "vandomed@gmail.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dvmisc.Rd’:
    https://doi.org/10.7287/peerj.preprints.3188v1
Problems with news in ‘NEWS.md’:
No news entries found.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘utils.R’
Maintainer: ‘Hugo Gasca-Aragon <hugo_gasca_aragon@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hugo",
                    family = "Gasca-Aragon",
                    role = c("aut", "cre"),
                    email = "hugo_gasca_aragon@hotmail.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dwlm.Rd’:
    https://doi.org/10.1119/1.15963
    https://doi.org/10.1119/1.17044
    https://doi.org/10.1039/AN9871200377
Maintainer: ‘Daniel Dalthorp <ddalthorp@protonmail.com>’

The Description field contains
  mortality, following Dalthorp, et al. (2022) <arXiv:2201.10064>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Bonne J.H. Zijlstra <B.J.H.Zijlstra@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Bonne", "J.H."),
                    family = "Zijlstra",
                    role = c("aut", "cre"),
                    email = "B.J.H.Zijlstra@uva.nl")
as necessary.
Found the following HTML validation problems:
delete_space.html:46:1 (delete_space.Rd:10): Warning: missing </ul> before </div>
hgt_to_dpt.html:46:1 (hgt_to_dpt.Rd:10): Warning: missing </ul> before </div>
run_iteration.html:53:1 (run_iteration.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dygraph-shiny.html:68:1 (dygraph-shiny.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Nathaniel E. Helwig <helwig@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nathaniel", "E."),
                    family = "Helwig",
                    role = c("aut", "cre"),
                    email = "helwig@umn.edu")
as necessary.
Maintainer: ‘Flavian Tschurr <flavian.tschurr@usys.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Flavian",
                    family = "Tschurr",
                    role = c("aut", "cre"),
                    email = "flavian.tschurr@usys.ethz.ch")
as necessary.
Maintainer: ‘Kosei Abe <mail@recyclebin.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kosei",
                      family = "Abe",
                      role = c("aut", "cre"),
                      email = "mail@recyclebin.jp"),
               person(given = "Richard",
                      family = "Cotton",
                      role = "ctb"))
as necessary.
Found the following HTML validation problems:
getNames.html:50:1 (getNames.Rd:12): Warning: missing </ul> before </div>
isVariableName.html:46:1 (isVariableName.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Matteo Marcantonio <marcantoniomatteo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/mattmar/dynamAedes
which should likely be
  https://github.com/mattmar/dynamAedes/issues
instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cfaHB.Rd: lavaan, cfa, model.syntax
  cfaOne.Rd: lavaan, cfa, model.syntax
  equivTest.Rd: lavaan
  exactFit.Rd: lavaan, cfa, model.syntax
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Peter Langfelder <Peter.Langfelder@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Peter",
                      family = "Langfelder",
                      role = c("aut", "cre"),
                      email = "Peter.Langfelder@gmail.com"),
               person(given = "Bin",
                      family = "Zhang",
                      role = "aut",
                      email = "binzhang.ucla@gmail.com"),
               person(given = c("with", "contributions", "from", "Steve"),
                      family = "Horvath",
                      role = "aut",
                      email = "SHorvath@mednet.ucla.edu"))
as necessary.
Found the following HTML validation problems:
get_algorithm.html:56:1 (get_algorithm.Rd:20): Warning: missing </ul> before </div>
get_diagnostics.html:56:1 (get_diagnostics.Rd:20): Warning: missing </ul> before </div>
get_draws.html:60:1 (get_draws.Rd:22): Warning: missing </ul> before </div>
get_elapsed_time.html:56:1 (get_elapsed_time.Rd:20): Warning: missing </ul> before </div>
get_max_treedepth.html:56:1 (get_max_treedepth.Rd:20): Warning: missing </ul> before </div>
get_model_code.html:56:1 (get_model_code.Rd:20): Warning: missing </ul> before </div>
get_nchains.html:56:1 (get_nchains.Rd:20): Warning: missing </ul> before </div>
get_ndraws.html:56:1 (get_ndraws.Rd:20): Warning: missing </ul> before </div>
get_pars_oi.html:56:1 (get_pars_oi.Rd:20): Warning: missing </ul> before </div>
mice.impute.lag.html:79:1 (mice.impute.lag.Rd:29): Warning: missing </ul> before </div>
mice.impute.lead.html:79:1 (mice.impute.lead.Rd:29): Warning: missing </ul> before </div>
Maintainer: ‘Eli D. Strauss <straussed@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Eli", "D."),
                    family = "Strauss",
                    role = c("aut", "cre"),
                    email = "straussed@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dyadic_similarity.Rd:27: Lost braces; missing escapes or markup?
    27 |      For example, the order {a, b, c} implies that a > b, a  > c, and b > c.
       |                             ^
Maintainer: ‘Xuechan Li <xuechanli0530@gmail.com>’

The Description field contains
  <arXiv:1906.07757v2> and Li, Sung and Xie (2021) <arXiv:2103.11085v2>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Yves Rozenholc <yves.rozenholc@u-paris.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yves",
                      family = "Rozenholc",
                      role = c("aut", "cre"),
                      email = "yves.rozenholc@u-paris.fr",
                      comment = "UR7537, Univ. Paris Cité"),
               person(given = "Christophe",
                      family = "Pouzat",
                      role = "aut",
                      comment = "IRMA, CNRS UMR 7501"),
               person(given = "Tiffany",
                      family = "Lieury",
                      role = "aut",
                      comment = "Cerebral Physiology lab, Univ. Paris Descartes"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’
Maintainer: ‘Jiaqi Tang <1107967177@qq.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jiaqi",
                    family = "Tang",
                    role = c("aut", "cre"),
                    email = "1107967177@qq.com")
as necessary.
Found the following HTML validation problems:
anonymization.html:58:1 (anonymization.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup?
    57 | By default, sampled from {-1, 1} with probabilities {.25, .75}.
       |                          ^
checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup?
    57 | By default, sampled from {-1, 1} with probabilities {.25, .75}.
       |                                                     ^
checkRd: (-1) new_log_level.Rd:19: Lost braces; missing escapes or markup?
    19 | \item{log_style}{is a {crayon::style()} that will colorize
       |                       ^
checkRd: (-1) new_log_level.Rd:22: Lost braces; missing escapes or markup?
    22 | \item{msg_style}{is a {crayon::style()} style that will gray scale the
       |                       ^
checkRd: (-1) sys_context.Rd:22: Lost braces; missing escapes or markup?
    22 | \item{"sysname"} : {The operating system name.}
       |                    ^
checkRd: (-1) sys_context.Rd:23: Lost braces; missing escapes or markup?
    23 | \item{"release"} : {The OS release.}
       |                    ^
checkRd: (-1) sys_context.Rd:24: Lost braces; missing escapes or markup?
    24 | \item{"version"} : {The OS version.}
       |                    ^
checkRd: (-1) sys_context.Rd:25: Lost braces; missing escapes or markup?
    25 | \item{"nodename"} : {A name by which the machine is known on the network (if any).}
       |                     ^
checkRd: (-1) sys_context.Rd:26: Lost braces; missing escapes or markup?
    26 | \item{"machine"} : {A concise description of the hardware, often the CPU type.}
       |                    ^
checkRd: (-1) sys_context.Rd:27: Lost braces; missing escapes or markup?
    27 | \item{"login"} : {The user's login name, or "unknown" if it cannot be ascertained.}
       |                  ^
checkRd: (-1) sys_context.Rd:28: Lost braces; missing escapes or markup?
    28 | \item{"user"} : {The name of the real user ID, or "unknown" if it cannot be ascertained.}
       |                 ^
checkRd: (-1) sys_context.Rd:29: Lost braces; missing escapes or markup?
    29 | \item{"r-ver"} : {R Version in (major).(minor) format.}
       |                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  new_fmt_layout.Rd: crayon
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
LogDispatch.html:91:1 (LogDispatch.Rd:52): Warning: <h5> anchor "Usage" already defined
dot-onAttach.html:53:1 (dot-onAttach.Rd:14): Warning: missing </ul> before </div>
dot-onDetach.html:49:1 (dot-onDetach.Rd:12): Warning: missing </ul> before </div>
dot-onLoad.html:53:1 (dot-onLoad.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Amirhossein Jalali <amir.jalali@ul.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Amirhossein",
                      family = "Jalali",
                      role = c("aut", "cre"),
                      email = "amir.jalali@ul.ie"),
               person(given = "Davood",
                      family = "Roshan",
                      role = "aut"),
               person(given = "Alberto",
                      family = "Alvarez-Iglesias",
                      role = "aut"),
               person(given = "John",
                      family = "Newell",
                      role = "aut"))
as necessary.
Maintainer: ‘Taha Zaghdoudi <zedtaha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Taha",
                    family = "Zaghdoudi",
                    role = c("aut", "cre"),
                    email = "zedtaha@gmail.com")
as necessary.
checkRd: (-1) Produc.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Produc.Rd:22: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
dpd.formula.html:68:1 (dpd.formula.Rd:21): Warning: missing </ul> before </div>
summary.dpd.html:51:1 (summary.dpd.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’
Found the following HTML validation problems:
collapse_set.html:58:1 (collapse_set.Rd:16): Warning: missing </ul> before </div>
get_description.html:50:1 (get_description.Rd:12): Warning: missing </ul> before </div>
range_parameter.html:73:1 (range_parameter.Rd:27): Warning: missing </ul> before </div>
Maintainer: ‘Hein Putter <H.Putter@lumc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hein",
                    family = "Putter",
                    role = c("aut", "cre"),
                    email = "h.putter@lumc.nl")
as necessary.
checkRd: (-1) NKI-breast-cancer-clinical-data.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) NKI-breast-cancer-clinical-data.Rd:33: Escaped LaTeX specials: \&
checkRd: (-1) NKI-breast-cancer-clinical-data.Rd:37: Escaped LaTeX specials: \&
checkRd: (-1) WBC-follow-up-data.Rd:13: Escaped LaTeX specials: \&
checkRd: (-1) WBC-follow-up-data.Rd:14: Escaped LaTeX specials: \&
checkRd: (-1) WBC-follow-up-data.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) WBC-follow-up-data.Rd:31: Escaped LaTeX specials: \&
checkRd: (-1) WBC-follow-up-data.Rd:41: Escaped LaTeX specials: \&
checkRd: (-1) WBC-measurements-data.Rd:13: Escaped LaTeX specials: \&
checkRd: (-1) WBC-measurements-data.Rd:14: Escaped LaTeX specials: \&
checkRd: (-1) WBC-measurements-data.Rd:25: Escaped LaTeX specials: \&
checkRd: (-1) WBC-measurements-data.Rd:30: Escaped LaTeX specials: \&
checkRd: (-1) WBC-measurements-data.Rd:40: Escaped LaTeX specials: \&
Maintainer: ‘Thomas Mailund <mailund@birc.au.dk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘M. Leeds <markleeds2@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "G.",
                      family = "Grothendieck",
                      role = "aut"),
               person(given = "M.",
                      family = "Leeds",
                      role = "cre",
                      email = "markleeds2@gmail.com"))
as necessary.
Found the following HTML validation problems:
names-dynrCook-method.html:47:1 (names-dynrCook-method.Rd:11): Warning: missing </ul> before </div>
names-dynrModel-method.html:47:1 (names-dynrModel-method.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
bayesCoxMcmc.html:61:1 (bayesCoxMcmc.Rd:20): Warning: missing </ul> before </div>
is.bayesCox.html:46:1 (is.bayesCox.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Oscar Garcia <garcia@dasometrics.net>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
deprecated.html:52:1 (deprecated.Rd:15): Warning: missing </ul> before </div>
read_h5.html:60:1 (read_h5.Rd:23): Warning: missing </ul> before </div>
recent_news.html:54:1 (recent_news.Rd:14): Warning: missing </ul> before </div>
switch_devel.html:54:1 (switch_devel.Rd:18): Warning: missing </ul> before </div>
test_h5_installation.html:48:1 (test_h5_installation.Rd:13): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter)’
Found the following HTML validation problems:
convert_definition.html:46:1 (convert_definition.Rd:10): Warning: missing </ul> before </div>
dot-method_process_definition.html:50:1 (dot-method_process_definition.Rd:12): Warning: missing </ul> before </div>
get_default_parameters.html:46:1 (get_default_parameters.Rd:10): Warning: missing </ul> before </div>
group_from_trajectory.html:52:1 (group_from_trajectory.Rd:16): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘getConstraintTests.R’ ‘getInvarCompTable.R’ ‘outputConstraintTab.R’
    ‘outputInvarCompTab.R’
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DySS.Rcheck/00install.out’ for details.
* used Fortran compiler: ‘GNU Fortran (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) monitor_long_1d.Rd:33: Lost braces
    33 | If \code{side="upward"}{apply control charts that aim to detect upward shifts.} \cr
       |                        ^
checkRd: (-1) monitor_long_1d.Rd:34: Lost braces
    34 | If \code{side="downward"}{apply control charts that aim to detect downward shifts.} \cr
       |                          ^
checkRd: (-1) monitor_long_1d.Rd:35: Lost braces
    35 | If \code{side="both"}{apply control charts that aim to detect shifts in both sides}}
       |                      ^
checkRd: (-1) monitor_long_1d.Rd:38: Lost braces
    38 | If \code{chart="CUSUM"}{apply CUSUM charts.} \cr
       |                        ^
checkRd: (-1) monitor_long_1d.Rd:39: Lost braces
    39 | If \code{chart="EWMA"}{apply EWMA charts.}}
       |                       ^
Maintainer: ‘Andrew George  <geo047@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) AM.Rd:95-98: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:99-102: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:103: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:123-125: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:126-133: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:134-135: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:136-137: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:163-165: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:166-173: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:174-176: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:177-178: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AM.Rd:179-180: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.earlyR.Rd:34-46: Lost braces
    34 | if (require(incidence)) {
       |                         ^
Maintainer: ‘Ehouarn Le Faou <ehouarnlefaou@orange.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ehouarn",
                    family = "Le Faou",
                    role = c("aut", "cre"),
                    email = "ehouarnlefaou@orange.fr")
as necessary.
Maintainer: ‘Nicolas Dumoulin <nicolas.dumoulin@inrae.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Franck",
                      family = "Jabot",
                      role = "aut"),
               person(given = "Thierry",
                      family = "Faure",
                      role = "aut"),
               person(given = "Nicolas",
                      family = "Dumoulin",
                      role = c("aut", "cre"),
                      email = "nicolas.dumoulin@inrae.fr"),
               person(given = "Carlo",
                      family = "Albert.",
                      role = "aut"))
as necessary.
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
manip_get_ggplot_data.html:46:1 (manip_get_ggplot_data.Rd:10): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plottingfunctions.bgms.R’ ‘plottingfunctions.easybgm.R’
Running ‘testthat.R’ [405s/153s]
Running R code in ‘testthat.R’ had CPU time 2.6 times elapsed time
Found the following HTML validation problems:
bgm_extract.html:50:1 (bgm_extract.Rd:12): Warning: missing </ul> before </div>
bgm_fit.html:50:1 (bgm_fit.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
format.estimate.html:71:1 (format.estimate.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
'library' or 'require' call not declared from: ‘lavaan’
Maintainer: ‘Emmanuel Arnhold <emmanuelarnhold@yahoo.com.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emmanuel",
                    family = "Arnhold",
                    role = c("aut", "cre"),
                    email = "emmanuelarnhold@yahoo.com.br")
as necessary.
Found the following HTML validation problems:
install_package.html:48:1 (install_package.Rd:11): Warning: missing </ul> before </div>
is.package_obj.html:48:1 (is.package_obj.Rd:11): Warning: missing </ul> before </div>
load_package.html:48:1 (load_package.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Aaron McGarvey <amcgarvey271@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "McGarvey",
                    role = c("aut", "cre"),
                    email = "amcgarvey271@gmail.com")
as necessary.
Found the following HTML validation problems:
easyPubMed-print.html:47:1 (easyPubMed-print.Rd:10): Warning: missing </ul> before </div>
easyPubMed-show.html:47:1 (easyPubMed-show.Rd:10): Warning: missing </ul> before </div>
fetchEPMData.html:55:1 (fetchEPMData.Rd:17): Warning: missing </ul> before </div>
getEPMData.html:49:1 (getEPMData.Rd:13): Warning: missing </ul> before </div>
getEPMJobList.html:55:1 (getEPMJobList.Rd:13): Warning: missing </ul> before </div>
getEPMMeta.html:49:1 (getEPMMeta.Rd:13): Warning: missing </ul> before </div>
getEPMMisc.html:49:1 (getEPMMisc.Rd:13): Warning: missing </ul> before </div>
getEPMQuery.html:49:1 (getEPMQuery.Rd:13): Warning: missing </ul> before </div>
getEPMRaw.html:49:1 (getEPMRaw.Rd:13): Warning: missing </ul> before </div>
getEPMUilist.html:50:1 (getEPMUilist.Rd:13): Warning: missing </ul> before </div>
parseEPMData.html:56:1 (parseEPMData.Rd:17): Warning: missing </ul> before </div>
setEPMData.html:53:1 (setEPMData.Rd:15): Warning: missing </ul> before </div>
setEPMJobList.html:60:1 (setEPMJobList.Rd:16): Warning: missing </ul> before </div>
setEPMMeta.html:53:1 (setEPMMeta.Rd:15): Warning: missing </ul> before </div>
setEPMMisc.html:54:1 (setEPMMisc.Rd:15): Warning: missing </ul> before </div>
setEPMQuery.html:55:1 (setEPMQuery.Rd:16): Warning: missing </ul> before </div>
setEPMRaw.html:54:1 (setEPMRaw.Rd:15): Warning: missing </ul> before </div>
setEPMUilist.html:54:1 (setEPMUilist.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ensure_dir.html:46:1 (ensure_dir.Rd:10): Warning: missing </ul> before </div>
write_text.html:54:1 (write_text.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Emmanuel Arnhold <emmanuelarnhold@yahoo.com.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emmanuel",
                    family = "Arnhold",
                    role = c("aut", "cre"),
                    email = "emmanuelarnhold@yahoo.com.br")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Yuting Dai <forlynna@sjtu.edu.cn>’

Found the following (possibly) invalid file URI:
  URI: forlynna@sjtu.edu.cn
    From: man/easySVG.Rd
Found the following HTML validation problems:
changearg.html:52:1 (changearg.Rd:12): Warning: missing </ul> before </div>
weisheimer.html:80:1 (weisheimer.Rd:31): Warning: missing </ul> before </div>
Found the following HTML validation problems:
insertVariable.html:55:1 (insertVariable.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Jens Hainmueller <jhain@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jens",
                    family = "Hainmueller",
                    role = c("aut", "cre"),
                    email = "jhain@stanford.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ebase_plot.R’ ‘ebase_prep.R’
Maintainer: ‘Michal Kolesár <kolesarmi@googlemail.com>’

The Description field contains
  and Plagborg-Møller (2020) <arXiv:2004.03448>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Andrea Rau <andrea.rau@inra.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrea",
                    family = "Rau",
                    role = c("aut", "cre"),
                    email = "andrea.rau@inra.fr")
as necessary.
Maintainer: ‘Gongyi Huang<53hgy@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Na",
                      family = "You",
                      role = "aut",
                      email = "youn@mail.sysu.edu.cn"),
               person(given = "Gongyi",
                      family = "Huang",
                      role = c("aut", "cre"),
                      email = "53hgy@163.com"))
as necessary.
Found the following HTML validation problems:
ebirdst-defunct.html:95:1 (ebirdst-defunct.Rd:68): Warning: missing </ul> before </div>
Maintainer: ‘"Hsiang Hao, Chen" <kbman1101@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hsiang",
                      family = "Hao",
                      role = "aut"),
               person(family = "Chen",
                      role = "aut"),
               person(given = "\"Hsiang",
                      family = "Hao",
                      role = "cre"),
               person(family = "Chen\"",
                      role = "cre",
                      email = "kbman1101@gmail.com"))
as necessary.
Found the following HTML validation problems:
coef.ebnm.html:51:1 (coef.ebnm.Rd:12): Warning: missing </ul> before </div>
fitted.ebnm.html:53:1 (fitted.ebnm.Rd:12): Warning: missing </ul> before </div>
print.ebnm.html:55:1 (print.ebnm.Rd:14): Warning: missing </ul> before </div>
print.summary.ebnm.html:55:1 (print.summary.ebnm.Rd:14): Warning: missing </ul> before </div>
residuals.ebnm.html:52:1 (residuals.ebnm.Rd:12): Warning: missing </ul> before </div>
vcov.ebnm.html:51:1 (vcov.ebnm.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Shuang Song <song-s19@mails.tsinghua.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shuang",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "song-s19@mails.tsinghua.edu.cn"),
               person(given = "Wei",
                      family = "Jiang",
                      role = "aut"),
               person(given = "Lin",
                      family = "Hou",
                      role = "aut"),
               person(given = "Hongyu",
                      family = "Zhao",
                      role = "aut"))
as necessary.
Maintainer: ‘Francisco Rosales <francisco.rosales-marticorena@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francisco",
                      family = "Rosales",
                      role = c("aut", "cre"),
                      email = "francisco.rosales-marticorena@protonmail.com"),
               person(given = "Tatyana",
                      family = "Krivobokova",
                      role = "aut"),
               person(given = "Paulo",
                      family = "Serra.",
                      role = "aut"))
as necessary.

The Description field contains
  and "Klockmann" (2021) <arXiv:1812.06948> for details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Garritt L. Page <page@stat.byu.edu>’

The Description field contains
  S; (2020) <arXiv:2012.11767>.  Both the parametric and semi-parametric
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
eCAR.out.html:69:1 (eCAR.out.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘John P Nolan <jpnolan@american.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "P"),
                    family = "Nolan",
                    role = c("aut", "cre"),
                    email = "jpnolan@american.edu")
as necessary.
Found the following HTML validation problems:
e_common.html:50:1 (e_common.Rd:12): Warning: missing </ul> before </div>
e_dims.html:56:1 (e_dims.Rd:13): Warning: missing </ul> before </div>
e_execute.html:48:1 (e_execute.Rd:13): Warning: missing </ul> before </div>
e_lines_gl.html:59:1 (e_lines_gl.Rd:17): Warning: missing </ul> before </div>
e_merge.html:46:1 (e_merge.Rd:10): Warning: missing </ul> before </div>
e_resize.html:46:1 (e_resize.Rd:10): Warning: missing </ul> before </div>
e_utc.html:47:1 (e_utc.Rd:11): Warning: missing </ul> before </div>
echarts4rBoxOutput.html:50:1 (echarts4rBoxOutput.Rd:12): Warning: missing </ul> before </div>
renderEcharts4rBox.html:54:1 (renderEcharts4rBox.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Introduction.html:216:1 (Introduction.Rd:127): Warning: missing </ul> before </div>
Maintainer: ‘David Harvey <harvey@depauw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Harvey",
                    role = c("aut", "cre"),
                    email = "harvey@depauw.edu")
as necessary.
Maintainer: ‘Jennifer Hurley <hurlej2@rpi.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sahir Rai Bhatnagar <sahir.bhatnagar@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Maintainer: ‘Gaurav Bansal <gaurbans@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gaurav",
                    family = "Bansal",
                    role = c("aut", "cre"),
                    email = "gaurbans@gmail.com")
as necessary.
Found the following HTML validation problems:
print.ecmwfr_archetype.html:53:1 (print.ecmwfr_archetype.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Gordana Popovic <g.popovic@unsw.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cgr.Rd: glasso
  plot.cgr.Rd: gplot
  stackedsdm.Rd: mvabund
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
documentation.html:107:1 (documentation.Rd:49): Warning: missing </ul> before </div>
Maintainer: ‘Rodolfo Souza <rodolfomssouza@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rodolfo",
                    family = "Souza",
                    role = c("aut", "cre"),
                    email = "rodolfomssouza@gmail.com")
as necessary.
Maintainer: ‘Castor Guisande Gonzalez <castor@uvigo.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Castor", "Guisande"),
                    family = "Gonzalez",
                    role = c("aut", "cre"),
                    email = "castor@uvigo.es")
as necessary.
Maintainer: ‘Karline Soetaert <karline.soetaert@nioz.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Karline",
                      family = "Soetaert",
                      role = c("aut", "cre"),
                      email = "karline.soetaert@nioz.nl"),
               person(given = c("Peter", "MJ"),
                      family = "Herman",
                      role = "aut",
                      email = "peter.herman@nioz.nl"))
as necessary.
Maintainer: ‘Luis Garcia <lpfgarcia@icmc.usp.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luis",
                      family = "Garcia",
                      role = c("aut", "cre"),
                      email = "lpfgarcia@icmc.usp.br"),
               person(given = "Ana",
                      family = "Lorena",
                      role = c("aut", "ctb")))
as necessary.
checkRd: (-1) ecolRxC.Rd:161-166: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:167-175: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:176-178: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:179-185: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:186-192: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:193-201: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:202-208: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:209-216: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ecolRxC.Rd:217-221: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Hugo Salinas <hugosal@comunidad.unam.mx>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’

The Description field contains
  <arXiv:1708.01242>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
rca.html:46:1 (rca.Rd:10): Warning: missing </ul> before </div>
File ‘ECOSolveR/libs/ECOSolveR.so’:
  Found ‘printf’, possibly from ‘printf’ (C)
    Objects: ‘ecos/libecos.a’, ‘ecos/libecos_bb.a’
  Found ‘putchar’, possibly from ‘putchar’ (C)
    Objects: ‘ecos/libecos.a’, ‘ecos/libecos_bb.a’
  Found ‘puts’, possibly from ‘printf’ (C), ‘puts’ (C)
    Objects: ‘ecos/libecos.a’, ‘ecos/libecos_bb.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Found the following HTML validation problems:
drawLine.html:50:1 (drawLine.Rd:12): Warning: missing </ul> before </div>
getCalendarTime.html:52:1 (getCalendarTime.Rd:14): Warning: missing </ul> before </div>
orderStatSearchColumns.html:46:1 (orderStatSearchColumns.Rd:10): Warning: missing </ul> before </div>
setCalendar.html:51:1 (setCalendar.Rd:12): Warning: missing </ul> before </div>
showStatItemList.html:54:1 (showStatItemList.Rd:14): Warning: missing </ul> before </div>
showStatTableList.html:50:1 (showStatTableList.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ginv.html:46:1 (ginv.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Antoine Bagnaro <antoine.bagnaro@wanadoo.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Antoine",
                    family = "Bagnaro",
                    role = c("aut", "cre"),
                    email = "antoine.bagnaro@wanadoo.fr")
as necessary.
Maintainer: ‘Benjamin L Hlina <benjamin.hlina@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jerome Guitton <jerome.guitton@agrocampus-ouest.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "J.",
                      family = "Guitton",
                      role = "aut"),
               person(given = "M.",
                      family = "Colleter",
                      role = "aut"),
               person(given = "P.",
                      family = "Gatti",
                      role = "aut"),
               person(given = "D.",
                      family = "Gascuel",
                      role = "aut"),
               person(given = "Jerome",
                      family = "Guitton",
                      role = "cre",
                      email = "jerome.guitton@agrocampus-ouest.fr"))
as necessary.
Found the following HTML validation problems:
E0.1.html:54:1 (E0.1.Rd:14): Warning: missing </ul> before </div>
Emsy.html:54:1 (Emsy.Rd:14): Warning: missing </ul> before </div>
a13.eq.html:70:1 (a13.eq.Rd:22): Warning: missing </ul> before </div>
a13.eq.ac.html:70:1 (a13.eq.ac.Rd:22): Warning: missing </ul> before </div>
mf.diagnosis.html:128:1 (mf.diagnosis.Rd:60): Warning: missing </ul> before </div>
regPB.html:58:1 (regPB.Rd:16): Warning: missing </ul> before </div>
regPB.ac.html:58:1 (regPB.ac.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Nele Schuwirth <nele.schuwirth@eawag.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nele",
                      family = "Schuwirth",
                      role = c("aut", "cre"),
                      email = "nele.schuwirth@eawag.ch"),
               person(given = c("Peter", "Reichert", "with", "contributions", "by", "Simone"),
                      family = "Langhans",
                      role = "aut",
                      email = "peter.reichert@eawag.ch"),
               person(given = "Christian",
                      family = "Michel",
                      role = "aut"))
as necessary.
checkRd: (-1) transformFitness.Rd:25: Lost braces; missing escapes or markup?
    25 | minimization (most others). This function computes a factor from {-1, 1} for
       |                                                                  ^
Found the following HTML validation problems:
plotStatistics.html:56:1 (plotStatistics.Rd:15): Warning: missing </ul> before </div>
reduceToSingleDataFrame.html:61:1 (reduceToSingleDataFrame.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Pankaj Das <pankaj.das2@icar.gov.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pankaj",
                    family = "Das",
                    role = c("aut", "cre"),
                    email = "pankaj.das2@icar.gov.in",
                    comment = c(ORCID = "0000-0003-1672-2502"))
as necessary.
Maintainer: ‘Yongbo Gan <yongbogan@whu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yongbo",
                      family = "Gan",
                      role = c("aut", "cre"),
                      email = "yongbogan@whu.edu.cn"),
               person(given = "Zhijian",
                      family = "Yang",
                      role = "aut"),
               person(given = "Wei",
                      family = "Mei",
                      role = "aut"))
as necessary.
Maintainer: ‘Fengru Wang <wangfr@whu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fengru",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "wangfr@whu.edu.cn"),
               person(given = "Yongbo",
                      family = "Gan",
                      role = "aut"),
               person(given = "Zhijian",
                      family = "Yang",
                      role = "aut"),
               person(given = "Wei",
                      family = "Mei",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
edc_viewer.html:54:1 (edc_viewer.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Eddington.html:135:1 (Eddington.Rd:94): Warning: <h5> anchor "Usage" already defined
Eddington.html:151:1 (Eddington.Rd:104): Warning: <h5> anchor "Usage" already defined
Eddington.html:157:1 (Eddington.Rd:108): Warning: <h5> anchor "Arguments" already defined
Eddington.html:181:1 (Eddington.Rd:122): Warning: <h5> anchor "Usage" already defined
Eddington.html:187:1 (Eddington.Rd:126): Warning: <h5> anchor "Arguments" already defined
Eddington.html:200:1 (Eddington.Rd:133): Warning: <h5> anchor "Returns" already defined
Eddington.html:218:1 (Eddington.Rd:143): Warning: <h5> anchor "Usage" already defined
Eddington.html:224:1 (Eddington.Rd:147): Warning: <h5> anchor "Arguments" already defined
Eddington.html:237:1 (Eddington.Rd:154): Warning: <h5> anchor "Returns" already defined
Found the following HTML validation problems:
add_fixed_holiday.html:58:1 (add_fixed_holiday.Rd:16): Warning: missing </ul> before </div>
add_floating_holiday.html:54:1 (add_floating_holiday.Rd:14): Warning: missing </ul> before </div>
add_holiday_periods.html:54:1 (add_holiday_periods.Rd:14): Warning: missing </ul> before </div>
change_day.html:58:1 (change_day.Rd:16): Warning: missing </ul> before </div>
create_work_schedule.html:50:1 (create_work_schedule.Rd:12): Warning: missing </ul> before </div>
print.work_schedule.html:51:1 (print.work_schedule.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Andreas Henelius <andreas.henelius@iki.fi>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Henelius",
                    role = c("aut", "cre"),
                    email = "andreas.henelius@iki.fi")
as necessary.
checkRd: (-1) read.edf.Rd:30: Lost braces
    30 | Kemp B., V\"{a}rri, A., Rosa, A.C., Nielsen, K.D. and Gade, J. (1992).
       |             ^
Maintainer: ‘Tal Galili <tal.galili@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    TODO:
Found the following HTML validation problems:
install_bundle_py.html:53:1 (install_bundle_py.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
adjToEdge.html:46:1 (adjToEdge.Rd:10): Warning: missing </ul> before </div>
edgeToJSON_igraph.html:46:1 (edgeToJSON_igraph.Rd:10): Warning: missing </ul> before </div>
edgeToJSON_matrix.html:46:1 (edgeToJSON_matrix.Rd:10): Warning: missing </ul> before </div>
edgebundleOutput.html:54:1 (edgebundleOutput.Rd:14): Warning: missing </ul> before </div>
renderEdgebundle.html:54:1 (renderEdgebundle.Rd:14): Warning: missing </ul> before </div>
saveEdgebundle.html:59:1 (saveEdgebundle.Rd:17): Warning: missing </ul> before </div>
shinyedge.html:47:1 (shinyedge.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Glenna Nightingale <glenna.evans@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Glenna",
                    family = "Nightingale",
                    role = c("aut", "cre"),
                    email = "glenna.evans@gmail.com")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Josep Pueyo-Ros [aut, cre] (<https://orcid.org/0000-0002-1236-5651>), ICRA - Catalan Institute for Water Research [fnd] (Edicitnet, 776665)’
  Authors@R: ‘Josep Pueyo-Ros [aut, cre] (ORCID: <https://orcid.org/0000-0002-1236-5651>), ICRA - Catalan Institute for Water Research [fnd] (project: Edicitnet, grant_agreement: 776665)’

  Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘indicator_volunteers.R’
Maintainer: ‘Frank Dondelinger <fdondelinger.work@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Frank",
                      family = "Dondelinger",
                      role = c("aut", "cre"),
                      email = "fdondelinger.work@gmail.com"),
               person(given = "Sophie",
                      family = "Lebre",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
canXXXRowTemplate.html:81:1 (canXXXRowTemplate.Rd:26): Warning: missing </ul> before </div>
Found the following HTML validation problems:
editableDT.html:58:1 (editableDT.Rd:16): Warning: missing </ul> before </div>
file2ext.html:46:1 (file2ext.Rd:10): Warning: missing </ul> before </div>
myimport.html:50:1 (myimport.Rd:12): Warning: missing </ul> before </div>
pickerInput3.html:46:1 (pickerInput3.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Edwin de Jonge <edwindjonge@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Edwin",
                      family = "de Jonge",
                      role = c("aut", "cre"),
                      email = "edwindjonge@gmail.com"),
               person(given = "Mark",
                      family = "van der Loo",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  as.lp.mip.Rd: make.lp
  editrules.plotting.Rd: as.igraph
  editrules_package.Rd: as.igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Thomas Hoffelder <thomas.hoffelder@boehringer-ingelheim.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Hoffelder",
                    role = c("aut", "cre"),
                    email = "thomas.hoffelder@boehringer-ingelheim.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘EDNE.EQ-package.Rd’:
    http://dx.doi.org/10.1080/10543406.2014.920344
    http://dx.doi.org/10.1208/s12248-020-00458-9
  File ‘EDNE.EQ.Rd’:
    http://dx.doi.org/10.1080/10543406.2014.920344
  File ‘EDNE.EQ.dissolution.profiles.Rd’:
    http://dx.doi.org/10.1080/10543406.2014.920344
    http://dx.doi.org/10.1208/s12248-020-00458-9
  File ‘ex_data_JoBS.Rd’:
    http://dx.doi.org/10.1080/10543406.2014.920344
Maintainer: ‘Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jorn",
                      family = "Lotsch",
                      role = c("aut", "cre"),
                      email = "j.lotsch@em.uni-frankfurt.de"),
               person(given = "Alfred",
                      family = "Ultsch",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
checkIdVar.html:51:1 (checkIdVar.Rd:13): Warning: missing </ul> before </div>
checkPsuStrata.html:46:1 (checkPsuStrata.Rd:10): Warning: missing </ul> before </div>
drawPVs.sdf.html:80:1 (drawPVs.sdf.Rd:31): Warning: missing </ul> before </div>
Maintainer: ‘Vanesa Jorda <jordav@unican.es>’

Found the following (possibly) invalid file URIs:
  URI: www.educationdata.unican.es
    From: man/ineq_female15a.Rd
  URI: www.educationdata.unican.es
    From: man/ineq_female25a.Rd
  URI: www.educationdata.unican.es
    From: man/ineq_male15a.Rd
  URI: www.educationdata.unican.es
    From: man/ineq_male25a.Rd
  URI: www.educationdata.unican.es
    From: man/ineq_total15a.Rd
  URI: www.educationdata.unican.es
    From: man/ineq_total25a.Rd
Maintainer: ‘Nathaniel E. Helwig <helwig@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nathaniel", "E."),
                    family = "Helwig",
                    role = c("aut", "cre"),
                    email = "helwig@umn.edu")
as necessary.
Maintainer: ‘Vipavee Trivittayasil <vipavee.tri@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vipavee",
                    family = "Trivittayasil",
                    role = c("aut", "cre"),
                    email = "vipavee.tri@gmail.com")
as necessary.
checkRd: (-1) eesim.Rd:148-151: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eesim.Rd:152-155: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eesim.Rd:156-158: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘David Navarro-Gonzalez <david.navarro@urv.cat>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Navarro-Gonzalez",
                      role = c("aut", "cre"),
                      email = "david.navarro@urv.cat"),
               person(given = "Urbano",
                      family = "Lorenzo-Seva",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
dot-factor_corres.html:54:1 (dot-factor_corres.Rd:14): Warning: missing </ul> before </div>
dot-nest_sym.html:59:1 (dot-nest_sym.Rd:16): Warning: missing </ul> before </div>
dot-paf_iter.html:71:1 (dot-paf_iter.Rd:22): Warning: missing </ul> before </div>
dot-parallel_sim.html:63:1 (dot-parallel_sim.Rd:18): Warning: missing </ul> before </div>
plot.CD.html:51:1 (plot.CD.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Guangjian Zhang <gzhang3@nd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guangjian",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "gzhang3@nd.edu"),
               person(given = "Ge",
                      family = "Jiang",
                      role = "aut"),
               person(given = "Minami",
                      family = "Hattori",
                      role = "aut"),
               person(given = "Lauren",
                      family = "Trichtinger",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
effectLiteGUI.html:46:1 (effectLiteGUI.Rd:10): Warning: missing </ul> before </div>
elrEffectsGUI.html:46:1 (elrEffectsGUI.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
effectsize_API.html:95:1 (effectsize_API.Rd:54): Warning: missing </ul> before </div>
effectsize_deprecated.html:60:1 (effectsize_deprecated.Rd:32): Warning: missing </ul> before </div>
is_effectsize_name.html:63:1 (is_effectsize_name.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Isabella Giammusso <isabella.giammusso@unipa.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Isabella",
                    family = "Giammusso",
                    role = c("aut", "cre"),
                    email = "isabella.giammusso@unipa.it")
as necessary.
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gunther",
                    family = "Schauberger",
                    role = c("aut", "cre"),
                    email = "gunther.schauberger@tum.de")
as necessary.
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gunther",
                    family = "Schauberger",
                    role = c("aut", "cre"),
                    email = "gunther.schauberger@tum.de")
as necessary.
Maintainer: ‘Wim Van der Elst <Wim.vanderelst@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wim",
                      family = "Van der Elst",
                      role = c("aut", "cre"),
                      email = "wim.vanderelst@gmail.com"),
               person(given = c("Ariel", "Alonso", "&", "Geert"),
                      family = "Molenberghs",
                      role = "aut"))
as necessary.
Maintainer: ‘Xiao-Jun Mao <maoxj.ki@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mu-Fa",
                      family = "Chen",
                      role = "aut",
                      email = "mfchen@bnu.edu.cn"),
               person(given = "Xiao-Jun",
                      family = "Mao",
                      role = "cre",
                      email = "maoxj.ki@gmail.com"))
as necessary.
Maintainer: ‘Chris Mann <cmann3@unl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chris",
                    family = "Mann",
                    role = c("aut", "cre"),
                    email = "cmann3@unl.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  acor.Rd: zoo
  egcm-package.Rd: adf.test, pp.test
  egcm.Rd: zoo, rlm, adf.test, pp.test
  egcm.set.default.i1test.Rd: adf.test, pp.test
  pgff.test.Rd: adf.test
  ur_power.Rd: adf.test, pp.test
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
theme_presentation.html:50:1 (theme_presentation.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
add_annotations.html:101:1 (add_annotations.Rd:44): Warning: missing </ul> before </div>
annotation_table.html:151:1 (annotation_table.Rd:89): Warning: missing </ul> before </div>
wfdb_annotations.html:171:1 (wfdb_annotations.Rd:111): Warning: missing </ul> before </div>
Maintainer: ‘Till Krenz <egor@tillt.net>’

Found the following (possibly) invalid URLs:
  URL: https:///egor.tillt.net/
    From: man/egor-package.Rd
    Message: Invalid URL: missing authority part
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘clustered.graphs.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  as_tibble.egor.Rd: tbl_svy, as_tibble, as_survey
  egor.Rd: as_tibble, tibble, tbl_svy
  rowlist.Rd: tibble
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Error(s) in re-building vignettes:
  ...
--- re-building ‘egor_allbus.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘egor_allbus.Rmd’

--- re-building ‘qualtrics.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘qualtrics.Rmd’

--- re-building ‘using_egor.Rmd’ using rmarkdown

Quitting from using_egor.Rmd:221-241 [unnamed-chunk-16]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `gray()`:
! invalid gray level, must be in [0,1].
---
Backtrace:
    ▆
 1. └─egor::vis_clustered_graphs(...)
 2.   └─egor (local) plotGraph(graph, center, this_layout)
 3.     └─grDevices::gray(1 - betw_grp_dens/max(betw_grp_dens), alpha = 0.7)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'using_egor.Rmd' failed with diagnostics:
invalid gray level, must be in [0,1].
--- failed re-building ‘using_egor.Rmd’

SUMMARY: processing the following file failed:
  ‘using_egor.Rmd’

Error: Vignette re-building failed.
Execution halted
Found the following HTML validation problems:
alter_design.html:69:1 (alter_design.Rd:28): Warning: missing </ul> before </div>
edgelist_to_wide.html:46:1 (edgelist_to_wide.Rd:10): Warning: missing </ul> before </div>
egor_options.html:89:1 (egor_options.Rd:39): Warning: missing </ul> before </div>
extract_egos_and_return.html:60:1 (extract_egos_and_return.Rd:17): Warning: missing </ul> before </div>
make_edge_list.html:46:1 (make_edge_list.Rd:10): Warning: missing </ul> before </div>
make_egor.html:59:1 (make_egor.Rd:17): Warning: missing </ul> before </div>
return_results.html:55:1 (return_results.Rd:15): Warning: missing </ul> before </div>
rotate_to_equilibrium.html:46:1 (rotate_to_equilibrium.Rd:10): Warning: missing </ul> before </div>
rotate_xy.html:54:1 (rotate_xy.Rd:14): Warning: missing </ul> before </div>
summary.egor.html:71:1 (summary.egor.Rd:27): Warning: missing </ul> before </div>
wide.dyads.to.edgelist.html:69:1 (wide.dyads.to.edgelist.Rd:26): Warning: missing </ul> before </div>
wide.dyads.to.edgelist.regex.html:63:1 (wide.dyads.to.edgelist.regex.Rd:22): Warning: missing </ul> before </div>
wide.to.long.html:79:1 (wide.to.long.Rd:30): Warning: missing </ul> before </div>
Found the following HTML validation problems:
calc_boot_out.html:63:1 (calc_boot_out.Rd:19): Warning: missing </ul> before </div>
paVector.html:58:1 (paVector.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
saveResults.html:57:1 (saveResults.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
frail.fit.html:78:1 (frail.fit.Rd:26): Warning: missing </ul> before </div>
Found the following HTML validation problems:
eexample.html:50:1 (eexample.Rd:12): Warning: missing </ul> before </div>
ehelp.palette.html:48:1 (ehelp.palette.Rd:11): Warning: missing </ul> before </div>
format.defns.html:51:1 (format.defns.Rd:12): Warning: missing </ul> before </div>
print.html:46:1 (print.Rd:10): Warning: missing </ul> before </div>
print.ehelp.html:51:1 (print.ehelp.Rd:12): Warning: missing </ul> before </div>
processOutput.html:58:1 (processOutput.Rd:16): Warning: missing </ul> before </div>
simulatePackage.html:51:1 (simulatePackage.Rd:13): Warning: missing </ul> before </div>
write.Fncorpus.html:78:1 (write.Fncorpus.Rd:30): Warning: missing </ul> before </div>
write.Info.html:64:1 (write.Info.Rd:22): Warning: missing </ul> before </div>
write.ehelp.html:50:1 (write.ehelp.Rd:12): Warning: missing </ul> before </div>
write.fmt.html:58:1 (write.fmt.Rd:16): Warning: missing </ul> before </div>
Error(s) in re-building vignettes:
  ...
--- re-building ‘eHOF.Rnw’ using knitr

Quitting from eHOF.Rnw:57-67 [4site.echo]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `load.taxlist()`:
! Reference list file /tmp/RtmpQJiJ4x/Species/GermanSL 1.5/species.dbf does not exist.
---
Backtrace:
    x
 1. \-vegdata::tax("all")
 2.   \-vegdata:::load.taxlist(refl, detailed = detailed)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'eHOF.Rnw' failed with diagnostics:
Reference list file /tmp/RtmpQJiJ4x/Species/GermanSL 1.5/species.dbf does not exist.
--- failed re-building ‘eHOF.Rnw’

SUMMARY: processing the following file failed:
  ‘eHOF.Rnw’

Error: Vignette re-building failed.
Execution halted
Found the following HTML validation problems:
writeCheckData.html:62:1 (writeCheckData.Rd:18): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘directory.R’ ‘facets.R’ ‘metadata.R’
Maintainer: ‘Miguel Porto <mpbertolo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/miguel-porto/eicm
which should likely be
  https://github.com/miguel-porto/eicm/issues
instead.
Maintainer: ‘Jose M. Pavía <jose.m.pavia@uv.es>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Peter Hoff <peter.hoff@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Hoff",
                    role = c("aut", "cre"),
                    email = "peter.hoff@duke.edu")
as necessary.

The Description field contains
  an ordered probit specification. See Hoff (2007) <arXiv:0711.1146> for
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stéphane",
                    family = "Laurent",
                    role = c("aut", "cre"),
                    email = "laurent_step@outlook.fr")
as necessary.
Maintainer: ‘Wayne Oldford <rwoldford@uwaterloo.ca>’

Found the following (possibly) invalid file URI:
  URI: introduction.html
    From: inst/doc/IndependenceExploration.html
Found the following HTML validation problems:
eikos_data.html:58:1 (eikos_data.Rd:16): Warning: missing </ul> before </div>
eikos_legend.html:71:1 (eikos_legend.Rd:23): Warning: missing </ul> before </div>
Found the following HTML validation problems:
update_blanket.html:50:1 (update_blanket.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Michael Kellermann <mrkellermann@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Olivia",
                      family = "Lau",
                      role = "aut",
                      email = "olivia.lau@post.harvard.edu"),
               person(given = c("Ryan", "T."),
                      family = "Moore",
                      role = "aut",
                      email = "rtm@american.edu"),
               person(given = "Michael",
                      family = "Kellermann",
                      role = c("aut", "cre"),
                      email = "mrkellermann@gmail.com"))
as necessary.
Maintainer: ‘James Honaker <zelig.zee@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gary",
                      family = "King",
                      role = "aut",
                      email = "king@harvard.edu"),
               person(given = "Molly",
                      family = "Roberts",
                      role = "aut",
                      email = "molly.e.roberts@gmail.com"),
               person(given = "James",
                      family = "Honaker",
                      role = "cre",
                      email = "zelig.zee@gmail.com"))
as necessary.
Maintainer: ‘Okan Bulut <bulut@ualberta.ca>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Mehmet Hakan Satman <mhsatman@istanbul.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mehmet", "Hakan"),
                      family = "Satman",
                      role = c("aut", "cre"),
                      email = "mhsatman@istanbul.edu.tr",
                      comment = "Ph.D."),
               person(given = "Erkin",
                      family = "Diyarbakirlioglu",
                      role = "aut",
                      comment = "Ph.D."))
as necessary.
Maintainer: ‘Hyukpyo Hong <hphong@kaist.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hyukpyo",
                      family = "Hong",
                      role = c("aut", "cre"),
                      email = "hphong@kaist.ac.kr"),
               person(given = "Boseung",
                      family = "Choi",
                      role = "aut"),
               person(given = c("Jae", "Kyoung"),
                      family = "Kim",
                      role = "aut"))
as necessary.
Maintainer: ‘Guo-You Lan <jj6020770416jj@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hsin-wen",
                    family = "Chang",
                    role = c("aut", "cre"),
                    email = "hwchang@stat.sinica.edu.tw")
as necessary.
Maintainer: ‘Lisa Steyer <lisa.steyer@hu-berlin.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lisa",
                    family = "Steyer",
                    role = c("aut", "cre"),
                    email = "lisa.steyer@hu-berlin.de")
as necessary.

The Description field contains
  <doi:10.1111/biom.13706>) and Steyer et al. (2023, <arXiv:2305.02075>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Pi Guo <guopi.01@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pi",
                    family = "Guo",
                    role = c("aut", "cre"),
                    email = "guopi.01@163.com")
as necessary.
Maintainer: ‘Manuel Pfeuffer <manuel.pfeuffer@hu-berlin.de>’

The Description field contains
  <doi:10.1111/biom.13706>. See Stöcker et. al. (2022) <arXiv:2203.10522>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) fit_mean.Rd:54: Lost braces
    54 | \code{t_optims}{optimal parametrizations}
       |                ^
checkRd: (-1) fit_mean.Rd:55: Lost braces
    55 | \code{G_optims}{optimal rotations}
       |                ^
checkRd: (-1) fit_mean.Rd:56: Lost braces
    56 | \code{b_optims}{optimal scalings}
       |                ^
checkRd: (-1) fit_mean.Rd:57: Lost braces
    57 | \code{n_optims}{optimal re-normalization}
       |                ^
checkRd: (-1) fit_mean.Rd:58: Lost braces
    58 | \code{n_iter}{number of iterations until convergence}
       |              ^
Found the following HTML validation problems:
get_Procrustes_fit_from_param.html:75:1 (get_Procrustes_fit_from_param.Rd:30): Warning: missing </ul> before </div>
Maintainer: ‘Hui Zou <zouxx019@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hui",
                      family = "Zou",
                      role = c("aut", "cre"),
                      email = "zouxx019@umn.edu"),
               person(given = "Trevor",
                      family = "Hastie",
                      role = "aut",
                      email = "hastie@stanford.edu"))
as necessary.
checkRd: (-1) docs_delete_by_query.Rd:47: Lost braces; missing escapes or markup?
    47 | as a document at .tasks/task/${taskId}. This is yours to keep or remove
       |                               ^
checkRd: (-1) docs_update_by_query.Rd:48: Lost braces; missing escapes or markup?
    48 | as a document at .tasks/task/${taskId}. This is yours to keep or remove
       |                               ^
Maintainer: ‘Luke Mirarix <lmiratrix@g.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luke",
                      family = "Miratrix",
                      role = "aut"),
               person(given = "Luke",
                      family = "Mirarix",
                      role = "cre",
                      email = "lmiratrix@g.harvard.edu"))
as necessary.
checkRd: (-1) AuditErrors.Rd:40: Escaped LaTeX specials: \_
checkRd: (-1) compute.audit.errors.Rd:24: Escaped LaTeX specials: \_
checkRd: (-1) compute.stark.t.Rd:35: Escaped LaTeX specials: \_ \_
checkRd: (-1) find.q.Rd:44: Escaped LaTeX specials: \_
checkRd: (-1) find.q.Rd:56: Escaped LaTeX specials: \_
checkRd: (-1) stark.test.Rd:50: Escaped LaTeX specials: \$
checkRd: (-1) stark.test.Rd:101: Escaped LaTeX specials: \$ \$
checkRd: (-1) tri.audit.sim.Rd:47: Escaped LaTeX specials: \_
checkRd: (-1) tri.calc.sample.Rd:34: Escaped LaTeX specials: \_
checkRd: (-1) tri.sample.Rd:34: Escaped LaTeX specials: \$
checkRd: (-1) tri.sample.Rd:36: Escaped LaTeX specials: \$
checkRd: (-1) tri.sample.Rd:49: Escaped LaTeX specials: \$
checkRd: (-1) weight.function.Rd:16: Escaped LaTeX specials: \_
Found the following HTML validation problems:
CAST.audit.html:63:1 (CAST.audit.Rd:21): Warning: missing </ul> before </div>
make.cartoon.html:57:1 (make.cartoon.Rd:16): Warning: missing </ul> before </div>
make.sample.from.totals.html:58:1 (make.sample.from.totals.Rd:14): Warning: missing </ul> before </div>
print.audit.plan.KM.html:51:1 (print.audit.plan.KM.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Willem M. van der Wal <willem@vanderwalresearch.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Willem", "M."),
                    family = "van der Wal",
                    role = c("aut", "cre"),
                    email = "willem@vanderwalresearch.com")
as necessary.
Maintainer: ‘Ardo van den Hout <Ardo.vandenHout@ucl.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ardo",
                      family = "van den Hout",
                      role = c("aut", "cre"),
                      email = "ardo.vandenhout@ucl.ac.uk"),
               person(given = c("Mei", "Sum"),
                      family = "Chan",
                      role = "aut"))
as necessary.
checkRd: (-1) electData.Rd:16: Lost braces; missing escapes or markup?
    16 | Variables: \code{id}  = {identification number},
       |                         ^
checkRd: (-1) electData.Rd:17: Lost braces; missing escapes or markup?
    17 | \code{state} = {state}, \code{age} = age in years on a shifted scale (current age minus 70),
       |                ^
checkRd: (-1) summary.elect.Rd:25: Lost braces; missing escapes or markup?
    25 |  TRUE for output on start-state totals e_{r.} (for \code{S}>0)
       |                                          ^
Found the following HTML validation problems:
bbox_to_sf.html:52:1 (bbox_to_sf.Rd:13): Warning: missing </ul> before </div>
estimate_raster_size.html:58:1 (estimate_raster_size.Rd:16): Warning: missing </ul> before </div>
merge_rasters.html:73:1 (merge_rasters.Rd:28): Warning: missing </ul> before </div>
set_opentopo_key.html:49:1 (set_opentopo_key.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Geoff Hing <geoffhing@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Geoff",
                    family = "Hing",
                    role = c("aut", "cre"),
                    email = "geoffhing@gmail.com")
as necessary.

The Description field contains
  (https://github.com/newsdev/elex/), a Python package and command line
Please enclose URLs in angle brackets (<...>).
Found the following HTML validation problems:
results.html:46:1 (results.Rd:10): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
rangeOD.html:46:1 (rangeOD.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Chris Mann <cmann3@unl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chris",
                    family = "Mann",
                    role = c("aut", "cre"),
                    email = "cmann3@unl.edu")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Marwan El Homsi [aut, cre, cph] (<https://orcid.org/0000-0002-5782-6757>, Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France.), Isabella Annesi-Maesano [ctb, ths, fnd] (<https://orcid.org/0000-0002-6340-9300>, Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France., Department of Allergic and Respiratory Diseases, Montpellier University Hospital, Montpellier.)’
  Authors@R: ‘Marwan El Homsi [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-5782-6757>, affiliation: Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France.), Isabella Annesi-Maesano [ctb, ths, fnd] (ORCID: <https://orcid.org/0000-0002-6340-9300>, affiliation1: Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France., affiliation2: Department of Allergic and Respiratory Diseases, Montpellier University Hospital, Montpellier.)’
Maintainer: ‘Shinichiro Tomizono <cowares@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shinichiro",
                    family = "Tomizono",
                    role = c("aut", "cre"),
                    email = "cowares@gmail.com")
as necessary.
Maintainer: ‘Duncan Murdoch <murdoch.duncan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Duncan",
                      family = "Murdoch",
                      role = c("aut", "cre"),
                      email = "murdoch.duncan@gmail.com"),
               person(given = c("E.", "D."),
                      family = "Chow",
                      role = "aut",
                      comment = "porting to R by Jesus M. Frias Celayeta"))
as necessary.
File ‘ellipsis/libs/ellipsis.so’:
  Found non-API calls to R: ‘PRVALUE’, ‘Rf_findVarInFrame3’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
dots_empty.html:41:1 (dots_empty.Rd:7): Warning: missing </ul> before </div>
dots_used.html:41:1 (dots_used.Rd:7): Warning: missing </ul> before </div>
Maintainer: ‘Marko Palangetic <marko.palangetic@ugent.be>’

The Description field contains
  et al. (2021) <arXiv:2011.12560v2>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Christof Neumann <christofneumann1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christof",
                    family = "Neumann",
                    role = c("aut", "cre"),
                    email = "christofneumann1@gmail.com")
as necessary.
checkRd: (-1) elo.run.Rd:80: Lost braces
    80 | \code{\link{score}}, \link{elo.run.helpers}{elo.run helpers}, \code{\link{elo.calc}},
       |                                            ^
Found the following HTML validation problems:
favored.elo.html:88:1 (favored.elo.Rd:43): Warning: missing </ul> before </div>
rank.teams.html:76:1 (rank.teams.Rd:34): Warning: missing </ul> before </div>
Maintainer: ‘Wassim Youssef <Wassim.G.Youssef@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Julien",
                      family = "Tomas",
                      role = "aut"),
               person(given = "Frederic",
                      family = "Planchet",
                      role = "aut"),
               person(given = "Wassim",
                      family = "Youssef",
                      role = c("aut", "cre"),
                      email = "wassim.g.youssef@gmail.com"))
as necessary.
Found the following HTML validation problems:
AddReference.html:54:1 (AddReference.Rd:14): Warning: missing </ul> before </div>
ComparisonMethods.html:81:1 (ComparisonMethods.Rd:29): Warning: missing </ul> before </div>
CompletionA.html:76:1 (CompletionA.Rd:26): Warning: missing </ul> before </div>
CompletionB.html:67:1 (CompletionB.Rd:21): Warning: missing </ul> before </div>
Dispersion.html:67:1 (Dispersion.Rd:21): Warning: missing </ul> before </div>
FctMethod1.html:70:1 (FctMethod1.Rd:22): Warning: missing </ul> before </div>
FctMethod2.html:70:1 (FctMethod2.Rd:22): Warning: missing </ul> before </div>
FctMethod3.html:70:1 (FctMethod3.Rd:22): Warning: missing </ul> before </div>
FctMethod4_1stPart.html:66:1 (FctMethod4_1stPart.Rd:20): Warning: missing </ul> before </div>
FctMethod4_2ndPart.html:78:1 (FctMethod4_2ndPart.Rd:26): Warning: missing </ul> before </div>
Method1.html:58:1 (Method1.Rd:16): Warning: missing </ul> before </div>
Method2.html:58:1 (Method2.Rd:16): Warning: missing </ul> before </div>
Method3.html:58:1 (Method3.Rd:16): Warning: missing </ul> before </div>
Method4A.html:58:1 (Method4A.Rd:16): Warning: missing </ul> before </div>
Method4B.html:71:1 (Method4B.Rd:23): Warning: missing </ul> before </div>
NoCompletion.html:63:1 (NoCompletion.Rd:19): Warning: missing </ul> before </div>
ReadHistory.html:77:1 (ReadHistory.Rd:29): Warning: missing </ul> before </div>
SurfacePlot.html:62:1 (SurfacePlot.Rd:18): Warning: missing </ul> before </div>
ValidationLevel1.html:71:1 (ValidationLevel1.Rd:23): Warning: missing </ul> before </div>
ValidationLevel2.html:62:1 (ValidationLevel2.Rd:18): Warning: missing </ul> before </div>
ValidationLevel3.html:63:1 (ValidationLevel3.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Mai Zhou <mai@ms.uky.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mai",
                    family = "Zhou",
                    role = c("aut", "cre"),
                    email = "mai@ms.uky.edu")
as necessary.
Found the following HTML validation problems:
after.envelope.html:51:1 (after.envelope.Rd:12): Warning: missing </ul> before </div>
as.character.MIME.html:51:1 (as.character.MIME.Rd:12): Warning: missing </ul> before </div>
mime-parameters.html:104:1 (mime-parameters.Rd:42): Warning: missing </ul> before </div>
Maintainer: ‘Joan Garriga <jgarriga@ceab.csic.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Joan",
                      family = "Garriga",
                      role = c("aut", "cre"),
                      email = "jgarriga@ceab.csic.es"),
               person(given = c("John", "R.B."),
                      family = "Palmer",
                      role = "aut"),
               person(given = "Aitana",
                      family = "Oltra",
                      role = "aut"),
               person(given = "Frederic",
                      family = "Bartumeus",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
GQTSOM.html:118:1 (GQTSOM.Rd:54): Warning: missing </ul> before </div>
PlotData.html:92:1 (PlotData.Rd:40): Warning: missing </ul> before </div>
PlotDefault.html:46:1 (PlotDefault.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
auto_thin.html:61:1 (auto_thin.Rd:19): Warning: missing </ul> before </div>
factor_diagram.html:110:1 (factor_diagram.Rd:49): Warning: missing </ul> before </div>
Found the following HTML validation problems:
contour3d.html:76:1 (contour3d.Rd:30): Warning: <h3> anchor "_sec_note" already defined
Maintainer: ‘Simon Urbanek <simon.urbanek@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Urbanek",
                      role = c("aut", "cre"),
                      email = "urbanek@research.att.com"),
               person(given = "Yossi",
                      family = "Rubner",
                      role = "aut"))
as necessary.
License stub is invalid DCF.
Maintainer: ‘Donghoh Kim <donghoh.kim@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
censor_data.html:65:1 (censor_data.Rd:23): Warning: missing </ul> before </div>
dmvnorm.html:54:1 (dmvnorm.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Maintainer: ‘Shawn Garbett <Shawn@Garbett.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shawn",
                      family = "Garbett",
                      role = c("aut", "cre"),
                      email = "shawn@garbett.org"),
               person(given = "Mark",
                      family = "Kozdoba",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
hreal.html:103:1 (hreal.Rd:23): Warning: missing </ul> before </div>
hvol.html:95:1 (hvol.Rd:45): Warning: missing </ul> before </div>
Found the following HTML validation problems:
animate_population.html:52:1 (animate_population.Rd:12): Warning: missing </ul> before </div>
plot_history.html:50:1 (plot_history.Rd:12): Warning: missing </ul> before </div>
plot_population.html:55:1 (plot_population.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
build_factors.html:50:1 (build_factors.Rd:12): Warning: missing </ul> before </div>
build_units_table.html:50:1 (build_units_table.Rd:12): Warning: missing </ul> before </div>
htmlwidgets_attributes.html:50:1 (htmlwidgets_attributes.Rd:12): Warning: missing </ul> before </div>
table_to_r.html:46:1 (table_to_r.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Suren Rathnayake <surenr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Suren",
                      family = "Rathnayake",
                      role = c("aut", "cre"),
                      email = "surenr@gmail.com"),
               person(given = "Geoff",
                      family = "McLachlan",
                      role = "aut"),
               person(given = "David",
                      family = "Peel",
                      role = "aut"),
               person(given = "Jangsun",
                      family = "Baek",
                      role = "aut"))
as necessary.
Maintainer: ‘Ziyang Lyu <ziyang.lyu@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ziyang",
                      family = "Lyu",
                      role = c("aut", "cre"),
                      email = "ziyang.lyu@unsw.edu.au"),
               person(given = "Daniel",
                      family = "Ahfock",
                      role = "aut"),
               person(given = c("Geoffrey", "J."),
                      family = "McLachlan",
                      role = "aut"))
as necessary.
Maintainer: ‘Tim Lucas <timcdlucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Anjali",
                      family = "Goswami",
                      role = "aut"),
               person(given = "Tim",
                      family = "Lucas",
                      role = c("aut", "cre"),
                      email = "timcdlucas@gmail.com"),
               person(given = "Prabu",
                      family = "Sivasubramaniam",
                      role = "aut"),
               person(given = "John",
                      family = "Finarelli",
                      role = "aut"))
as necessary.
checkRd: (-1) macacaModels.Rd:9: Lost braces in \itemize; meant \describe ?
checkRd: (-1) macacaModels.Rd:10-11: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Deniz Akdemir <deniz.akdemir.work@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Deniz",
                      family = "Akdemir",
                      role = c("aut", "cre"),
                      email = "deniz.akdemir.work@gmail.com"),
               person(given = c("Okeke", "Uche"),
                      family = "Godfrey",
                      role = "aut"))
as necessary.
Maintainer: ‘Jon Barry <jon.barry@cefas.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jon",
                      family = "Barry",
                      role = c("aut", "cre"),
                      email = "jon.barry@cefas.co.uk"),
               person(given = "David",
                      family = "Maxwell",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘emon-package.Rd’:
    \keyword{power, ecological surveys, video surveys, [TRUNCATED]
Maintainer: ‘Simon Schwab <schw4b@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Schwab",
                    role = c("aut", "cre"),
                    email = "schw4b@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘as.character.emphatic.Rd’ ‘as_emphatic.Rd’ ‘as_html.Rd’
    ‘as_latex.Rd’ ‘as_svg.Rd’ ‘as_svg_anim.Rd’ ‘as_svg_group.Rd’
    ‘as_typst.Rd’ ‘hl.Rd’ ‘hl_adjust.Rd’ ‘is_emphatic.Rd’
    ‘knit_print.emphatic.Rd’ ‘print.emphatic.Rd’ ‘show_html.Rd’
    ‘write_xlsx.Rd’
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/em.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) em.Rd:25: Lost braces
    25 |  \code{terms} the code{terms} object used.
       |                       ^
checkRd: (-1) em.clogit.Rd:65: Lost braces
    65 |  \code{terms} the code{terms} object used.
       |                       ^
checkRd: (-1) em.default.Rd:65: Lost braces
    65 |  \code{terms} the code{terms} object used.
       |                       ^
checkRd: (-1) em.fitdist.Rd:49: Lost braces
    49 |  \code{terms} the code{terms} object used.
       |                       ^
checkRd: (-1) em.glmerMod.Rd:50: Lost braces
    50 |  \code{terms} the code{terms} object used.
       |                       ^
checkRd: (-1) em.panelmodel.Rd:49: Lost braces
    49 |  \code{terms} the code{terms} object used.
       |                       ^
Found the following HTML validation problems:
cstep.html:48:1 (cstep.Rd:11): Warning: missing </ul> before </div>
sstep.html:48:1 (sstep.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Eun-Kyung Lee <lee.eunk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eun-Kyung",
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "lee.eunk@gmail.com"),
               person(given = "Hye-Min",
                      family = "Choe",
                      role = "aut"))
as necessary.
Maintainer: ‘Linsui Deng <denglinsui@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Linsui",
                    family = "Deng",
                    role = c("aut", "cre"),
                    email = "denglinsui@gmail.com")
as necessary.
Maintainer: ‘Sang Kyu Lee <leesa111@msu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kexuan",
                      family = "Yang",
                      role = "aut",
                      email = "717260446@qq.com"),
               person(given = c("Sang", "Kyu"),
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "leesa111@msu.edu"),
               person(given = "Jun",
                      family = "Zhao",
                      role = "aut",
                      email = "zhaojun2021@hotmail.com"),
               person(given = "Hyoung-Moon",
                      family = "Kim",
                      role = "aut",
                      email = "hmk966a@gmail.com"))
as necessary.
Maintainer: ‘Uwe Menzel <uwemenzel@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Uwe",
                    family = "Menzel",
                    role = c("aut", "cre"),
                    email = "uwemenzel@gmail.com")
as necessary.
Found the following HTML validation problems:
bind.trackdata.html:47:1 (bind.trackdata.Rd:10): Warning: missing </ul> before </div>
create_itemsInLevel.html:239:1 (create_itemsInLevel.Rd:160): Warning: missing </ul> before </div>
create_links.html:75:1 (create_links.Rd:24): Warning: missing </ul> before </div>
dimnames.trackdata.html:47:1 (dimnames.trackdata.Rd:10): Warning: missing </ul> before </div>
dur.html:46:1 (dur.Rd:10): Warning: missing </ul> before </div>
export_seglistToTxtCollection.html:58:1 (export_seglistToTxtCollection.Rd:15): Warning: missing </ul> before </div>
make.emuRsegs.html:58:1 (make.emuRsegs.Rd:16): Warning: missing </ul> before </div>
polygonplot.html:93:1 (polygonplot.Rd:39): Warning: missing </ul> before </div>
print.emuRsegs.html:51:1 (print.emuRsegs.Rd:12): Warning: missing </ul> before </div>
print.emuRtrackdata.html:51:1 (print.emuRtrackdata.Rd:12): Warning: missing </ul> before </div>
sort.emuRsegs.html:55:1 (sort.emuRsegs.Rd:14): Warning: missing </ul> before </div>
summary.emuDBhandle.html:53:1 (summary.emuDBhandle.Rd:12): Warning: missing </ul> before </div>
summary.emusegs.html:51:1 (summary.emusegs.Rd:12): Warning: missing </ul> before </div>
summary.trackdata.html:51:1 (summary.trackdata.Rd:12): Warning: missing </ul> before </div>
update_itemsInLevel.html:105:1 (update_itemsInLevel.Rd:30): Warning: missing </ul> before </div>
Maintainer: ‘Tim Bergsma <bergsmat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tim",
                    family = "Bergsma",
                    role = c("aut", "cre"),
                    email = "bergsmat@gmail.com")
as necessary.
checkRd: (-1) encode.character.Rd:22: Escaped LaTeX specials: \~
Found the following HTML validation problems:
assign_to_global.html:45:1 (assign_to_global.Rd:10): Warning: missing </ul> before </div>
hex2raw.html:45:1 (hex2raw.Rd:10): Warning: missing </ul> before </div>
raw2hex.html:45:1 (raw2hex.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Christian E. Galarza <cgalarza88@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Christian", "E."),
                      family = "Galarza",
                      role = c("aut", "cre"),
                      email = "cgalarza88@gmail.com"),
               person(given = c("Jonathan", "M."),
                      family = "Olate",
                      role = "aut"))
as necessary.
Maintainer: ‘Yafei Xu <yafei.xu@hotmail.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yafei",
                    family = "Xu",
                    role = c("aut", "cre"),
                    email = "yafei.xu@hotmail.de")
as necessary.
Maintainer: ‘Fatma Sevinc Kurnaz <fatmasevinckurnaz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Fatma", "Sevinc"),
                      family = "Kurnaz",
                      role = c("aut", "cre"),
                      email = "fatmasevinckurnaz@gmail.com"),
               person(given = "Irene",
                      family = "Hoffmann",
                      role = "aut"),
               person(given = "Peter",
                      family = "Filzmoser",
                      role = "aut"))
as necessary.
checkRd: (-1) enetLTS-package.Rd:41: Lost braces; missing escapes or markup?
    41 |   \code{family="binomial"} should be a factor with two levels which is coded as \code{0} and {1}.
       |                                                                                              ^
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "John",
                      family = "Fox",
                      role = "aut"),
               person(given = "Bill",
                      family = "Venables",
                      role = c("aut", "cre"),
                      email = "bill.venables@gmail.com"),
               person(given = "Anthony",
                      family = "Damico",
                      role = "aut"),
               person(given = c("Anne", "Pier"),
                      family = "Salverda",
                      role = "aut"))
as necessary.
Maintainer: ‘Nicolai Meinshausen <meinshausen@stat.math.ethz.ch>’

The Description field contains
  supports classification (experimental).  <arxiv:2307.00835>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Douglas Bates <bates@stat.wisc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R", "port", "by", "Douglas"),
                      family = "Bates",
                      role = "aut",
                      email = "bates@stat.wisc.edu"),
               person(given = c("Karen", "A.F."),
                      family = "Copeland",
                      role = "aut",
                      email = "karen@boulderstats.com"),
               person(given = "Douglas",
                      family = "Bates",
                      role = "cre",
                      email = "bates@stat.wisc.edu"))
as necessary.
Found the following HTML validation problems:
plot_jk.html:73:1 (plot_jk.Rd:23): Warning: missing </ul> before </div>
print.html:55:1 (print.Rd:19): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-euclid.html:50:1 (dot-euclid.Rd:12): Warning: missing </ul> before </div>
dot-interpCoordFromQuantile.html:73:1 (dot-interpCoordFromQuantile.Rd:27): Warning: missing </ul> before </div>
dot-scalePredictors.html:54:1 (dot-scalePredictors.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
rasterToPoints2.html:46:1 (rasterToPoints2.Rd:10): Warning: missing </ul> before </div>
unwrap_list.html:46:1 (unwrap_list.Rd:10): Warning: missing </ul> before </div>
wrap_list.html:46:1 (wrap_list.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
coef.enriched_glm.html:55:1 (coef.enriched_glm.Rd:14): Warning: missing </ul> before </div>
coef.enriched_lm.html:55:1 (coef.enriched_lm.Rd:14): Warning: missing </ul> before </div>
get_auxiliary_functions.html:52:1 (get_auxiliary_functions.Rd:13): Warning: missing </ul> before </div>
get_bias_function.html:52:1 (get_bias_function.Rd:13): Warning: missing </ul> before </div>
get_dmodel_function.html:52:1 (get_dmodel_function.Rd:13): Warning: missing </ul> before </div>
get_information_function.html:52:1 (get_information_function.Rd:13): Warning: missing </ul> before </div>
get_pmodel_function.html:52:1 (get_pmodel_function.Rd:13): Warning: missing </ul> before </div>
get_qmodel_function.html:52:1 (get_qmodel_function.Rd:13): Warning: missing </ul> before </div>
get_score_function.html:52:1 (get_score_function.Rd:13): Warning: missing </ul> before </div>
get_simulate_function.html:52:1 (get_simulate_function.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Saeid Amiri <saeid.amiri1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Saeid",
                      family = "Amiri",
                      role = c("aut", "cre"),
                      email = "saeid.amiri1@gmail.com"),
               person(given = "Bertrand",
                      family = "Clarke",
                      role = "aut"),
               person(given = "Jennifer",
                      family = "Clarke.",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:1506.07930>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) CTN.Rd:22: Lost braces; missing escapes or markup?
    22 | less memory. Genetic data consists of nucleotide data {A,T,C,G} and are usually saved
       |                                                       ^
Maintainer: ‘Chris Fraley <fraley@u.washington.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chris",
                      family = "Fraley",
                      role = c("aut", "cre"),
                      email = "fraley@u.washington.edu"),
               person(given = c("Adrian", "E."),
                      family = "Raftery",
                      role = "aut"),
               person(given = c("J.", "McLean"),
                      family = "Sloughter",
                      role = "aut"),
               person(given = "Tilmann",
                      family = "Gneiting",
                      role = "aut"),
               person(given = c("University", "of"),
                      family = "Washington.",
                      role = "aut"))
as necessary.
Maintainer: ‘Sandor Baran <baran.sandor@inf.unideb.hu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "RA",
                      family = "Yuen",
                      role = "aut"),
               person(given = "Sandor",
                      family = "Baran",
                      role = c("aut", "cre"),
                      email = "baran.sandor@inf.unideb.hu"),
               person(given = "Chris",
                      family = "Fraley",
                      role = "aut"),
               person(given = "Tilmann",
                      family = "Gneiting",
                      role = "aut"),
               person(given = "Sebastian",
                      family = "Lerch",
                      role = "aut"),
               person(given = "Michael",
                      family = "Scheuerer",
                      role = "aut"),
               person(given = "Thordis",
                      family = "Thorarinsdottir",
                      role = "aut"))
as necessary.
Maintainer: ‘Jakob Messner <jakob.messner@posteo.net>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Dylan Catlett <dcat4444@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dylan",
                      family = "Catlett",
                      role = c("aut", "cre"),
                      email = "dcat4444@gmail.com"),
               person(given = "Kevin",
                      family = "Son",
                      role = "ctb"),
               person(given = "Connie",
                      family = "Liang",
                      role = "ctb"))
as necessary.
Found the following HTML validation problems:
ensr.html:83:1 (ensr.Rd:35): Warning: missing </ul> before </div>
preferable.html:52:1 (preferable.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Didier Chauveau <didier.chauveau@univ-orleans.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘EntropyMCMC-package.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘EntropyMCMC.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘EntropyParallel.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘MCMCcopies.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘MCMCcopies.cl.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘MCMCcopies.mc.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘plot.KbMCMC.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘plot.plMCMC.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘plot_Kblist.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
  File ‘summary.plMCMC.Rd’:
    http://dx.doi.org/10.1051/ps/2012004
Found the following HTML validation problems:
collapseInfo.html:46:1 (collapseInfo.Rd:10): Warning: missing </ul> before </div>
getRenvStatus.html:51:1 (getRenvStatus.Rd:13): Warning: missing </ul> before </div>
getRepo.html:49:1 (getRepo.Rd:10): Warning: missing </ul> before </div>
prettyPrintInfo.html:47:1 (prettyPrintInfo.Rd:10): Warning: missing </ul> before </div>
remoteInfo.html:46:1 (remoteInfo.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cash-enve.GrowthCurve-method.html:51:1 (cash-enve.GrowthCurve-method.Rd:12): Warning: missing </ul> before </div>
cash-enve.RecPlot2-method.html:51:1 (cash-enve.RecPlot2-method.Rd:12): Warning: missing </ul> before </div>
cash-enve.RecPlot2.Peak-method.html:51:1 (cash-enve.RecPlot2.Peak-method.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plotanno.html:50:1 (plotanno.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Martin Loos <mloos@envibee.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Loos",
                      role = c("aut", "cre"),
                      email = "mloos@envibee.ch"),
               person(given = "Christian",
                      family = "Gerber",
                      role = "aut"))
as necessary.
File ‘enviPat/libs/enviPat.so’:
  Found non-API call to R: ‘SETLENGTH’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Daniel Mastropietro <mastropi@uwalumni.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Mastropietro",
                    role = c("aut", "cre"),
                    email = "mastropi@uwalumni.com")
as necessary.
Maintainer: ‘Castor Guisande Gonzalez <castor@uvigo.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Castor", "Guisande"),
                    family = "Gonzalez",
                    role = c("aut", "cre"),
                    email = "castor@uvigo.es")
as necessary.
checkRd: (-1) metrics.Rd:124: Lost braces
   124 | Avg = 0.5 (sum | P_i - Q_i| + max{ | P_i - Q_i |})
       |                                  ^
Maintainer: ‘Martina Campulova <martina.campulova@mendelu.cz>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘network.Rd’ ‘types.Rd’
Found the following HTML validation problems:
col2hex.html:46:1 (col2hex.Rd:10): Warning: missing </ul> before </div>
dot-getext.html:46:1 (dot-getext.Rd:10): Warning: missing </ul> before </div>
dot-getfilename.html:46:1 (dot-getfilename.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Andreas Schulz <ades-s@web.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Schulz",
                    role = c("aut", "cre"),
                    email = "ades-s@web.de")
as necessary.
Found the following HTML validation problems:
ENadddemand.html:58:1 (ENadddemand.Rd:16): Warning: missing </ul> before </div>
ENdeletedemand.html:50:1 (ENdeletedemand.Rd:12): Warning: missing </ul> before </div>
ENsetbasedemand.html:54:1 (ENsetbasedemand.Rd:14): Warning: missing </ul> before </div>
ENsetdemandmodel.html:58:1 (ENsetdemandmodel.Rd:16): Warning: missing </ul> before </div>
ENsetdemandname.html:54:1 (ENsetdemandname.Rd:14): Warning: missing </ul> before </div>
ENsetlinkid.html:50:1 (ENsetlinkid.Rd:12): Warning: missing </ul> before </div>
ENsetlinknodes.html:54:1 (ENsetlinknodes.Rd:14): Warning: missing </ul> before </div>
ENsetnodeid.html:50:1 (ENsetnodeid.Rd:12): Warning: missing </ul> before </div>
ENsetreport.html:46:1 (ENsetreport.Rd:10): Warning: missing </ul> before </div>
ENsetstatusreport.html:46:1 (ENsetstatusreport.Rd:10): Warning: missing </ul> before </div>
ENsettankdata.html:83:1 (ENsettankdata.Rd:33): Warning: missing </ul> before </div>
ENsetvertices.html:54:1 (ENsetvertices.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Bradley Eck <brad@bradeck.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Bradley", "J."),
                      family = "Eck",
                      role = "aut"),
               person(given = "Bradley",
                      family = "Eck",
                      role = "cre",
                      email = "brad@bradeck.net"))
as necessary.
Found the following HTML validation problems:
is.epanet.inp.html:46:1 (is.epanet.inp.Rd:10): Warning: missing </ul> before </div>
is.epanet.rpt.html:46:1 (is.epanet.rpt.Rd:10): Warning: missing </ul> before </div>
is.epanetmsx.rpt.html:46:1 (is.epanetmsx.rpt.Rd:10): Warning: missing </ul> before </div>
is.expandedLinkTable.html:46:1 (is.expandedLinkTable.Rd:10): Warning: missing </ul> before </div>
is.sparkline.html:46:1 (is.sparkline.Rd:10): Warning: missing </ul> before </div>
is.sparklineTable.html:46:1 (is.sparklineTable.Rd:10): Warning: missing </ul> before </div>
plot.sparklineTable.html:51:1 (plot.sparklineTable.Rd:12): Warning: missing </ul> before </div>
print.summary.epanet.rpt.html:52:1 (print.summary.epanet.rpt.Rd:12): Warning: missing </ul> before </div>
print.summary.epanetmsx.rpt.html:52:1 (print.summary.epanetmsx.rpt.Rd:12): Warning: missing </ul> before </div>
summary.epanet.inp.html:52:1 (summary.epanet.inp.Rd:12): Warning: missing </ul> before </div>
summary.epanetmsx.rpt.html:51:1 (summary.epanetmsx.rpt.Rd:12): Warning: missing </ul> before </div>
Found the following files/directories:
  ‘Net1-fromR.inp’
checkRd: (-1) misClustRate.Rd:18: Lost braces; missing escapes or markup?
    18 | Compute the empirical MCR, assuming that #{cluster} = #{block},
       |                                           ^
checkRd: (-1) misClustRate.Rd:18: Lost braces; missing escapes or markup?
    18 | Compute the empirical MCR, assuming that #{cluster} = #{block},
       |                                                        ^
Found the following HTML validation problems:
absmin.criteria.html:47:1 (absmin.criteria.Rd:10): Warning: missing </ul> before </div>
hard.html:50:1 (hard.Rd:12): Warning: missing </ul> before </div>
permColumn.html:51:1 (permColumn.Rd:12): Warning: missing </ul> before </div>
rootmatrix.html:47:1 (rootmatrix.Rd:10): Warning: missing </ul> before </div>
soft.html:50:1 (soft.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Teemu Daniel Laajala <teelaa@utu.fi>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Teemu", "Daniel"),
                      family = "Laajala",
                      role = c("aut", "cre"),
                      email = "teelaa@utu.fi"),
               person(given = "Mika",
                      family = "Murtojarvi",
                      role = "ctb",
                      email = "mianmu2@hotmail.com"))
as necessary.
Found the following HTML validation problems:
PEP-methods.html:74:1 (PEP-methods.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Michael A Rotondi <mrotondi@yorku.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "A"),
                    family = "Rotondi",
                    role = c("aut", "cre"),
                    email = "mrotondi@yorku.ca")
as necessary.
Maintainer: ‘Tanujit Chakraborty <tanujitisi@gmail.com>’

The Description field contains
  et al. (2023) <arXiv:2206.10696> <doi:10.1016/j.chaos.2023.113124>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
dot-check_generation_time_valid.html:48:1 (dot-check_generation_time_valid.Rd:12): Warning: missing </ul> before </div>
dot-check_offspring_func_valid.html:55:1 (dot-check_offspring_func_valid.Rd:18): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘clean_admin_names.R’ ‘consistency_check.R’ ‘get_admin_names.R’
    ‘handle_outliers.R’ ‘missing_plot.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  clean_admin_names.Rd: countrycode
  clean_names_strings.Rd: janitor
  consistency_check.Rd: ggplot2
  export.Rd: rio
  import.Rd: rio
  missing_plot.Rd: ggplot2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
check_for_cache_warnings.html:50:1 (check_for_cache_warnings.Rd:12): Warning: missing </ul> before </div>
parse_signal.html:50:1 (parse_signal.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Virasakdi Chongsuvivatwong <cvirasak@medicine.psu.ac.th>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Virasakdi",
                    family = "Chongsuvivatwong",
                    role = c("aut", "cre"),
                    email = "cvirasak@medicine.psu.ac.th")
as necessary.
checkRd: (-1) risk.display.rd:98: Escaped LaTeX specials: \$
Found the following HTML validation problems:
DiscrSI.html:55:1 (DiscrSI.Rd:14): Warning: missing </ul> before </div>
EstimateR.html:145:1 (EstimateR.Rd:70): Warning: missing </ul> before </div>
OverallInfectivity.html:51:1 (OverallInfectivity.Rd:12): Warning: missing </ul> before </div>
WT.html:95:1 (WT.Rd:40): Warning: missing </ul> before </div>
Found the following HTML validation problems:
expo_fun.html:54:1 (expo_fun.Rd:13): Warning: missing </ul> before </div>
gompi_fun.html:54:1 (gompi_fun.Rd:13): Warning: missing </ul> before </div>
logi_fun.html:54:1 (logi_fun.Rd:13): Warning: missing </ul> before </div>
mono_fun.html:54:1 (mono_fun.Rd:13): Warning: missing </ul> before </div>
print.fit_lin.html:51:1 (print.fit_lin.Rd:12): Warning: missing </ul> before </div>
print.fit_nlin2.html:51:1 (print.fit_nlin2.Rd:12): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  sub-.epiflows.Rd: [.epicontacts
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
adls_timevarying_region_data.html:65:1 (adls_timevarying_region_data.Rd:20): Warning: missing </ul> before </div>
andh_forest_data.html:75:1 (andh_forest_data.Rd:25): Warning: missing </ul> before </div>
Found the following HTML validation problems:
api_get_request.html:50:1 (api_get_request.Rd:12): Warning: missing </ul> before </div>
api_post_request.html:50:1 (api_post_request.Rd:12): Warning: missing </ul> before </div>
api_request.html:66:1 (api_request.Rd:24): Warning: missing </ul> before </div>
http_condition.html:50:1 (http_condition.Rd:12): Warning: missing </ul> before </div>
stop_for_status.html:50:1 (stop_for_status.Rd:12): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:151:1 (inst/NEWS.Rd:80): Warning: missing </ul> before </div>
NEWS.html:73:1 (inst/NEWS.Rd:33): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:93:1 (inst/NEWS.Rd:45): Warning: <h4> anchor "BUG-FIXES" already defined
Found the following HTML validation problems:
as.epi.data.frame.html:47:1 (as.epi.data.frame.Rd:10): Warning: missing </ul> before </div>
create_scenario_list.html:51:1 (create_scenario_list.Rd:20): Warning: <h3> anchor "scenarios.df" already defined
format_param.html:52:1 (format_param.Rd:13): Warning: missing </ul> before </div>
get_nwparam.html:52:1 (get_nwparam.Rd:13): Warning: missing </ul> before </div>
mcat.html:47:1 (mcat.Rd:10): Warning: missing </ul> before </div>
param.net_from_table.html:54:1 (param.net_from_table.Rd:23): Warning: <h3> anchor "long.param.df" already defined
plot.epi.data.frame.html:198:1 (plot.epi.data.frame.Rd:108): Warning: missing </ul> before </div>
print_nwstats_table.html:50:1 (print_nwstats_table.Rd:12): Warning: missing </ul> before </div>
test_icm.html:48:1 (test_icm.Rd:10): Warning: missing </ul> before </div>
test_net.html:48:1 (test_net.Rd:10): Warning: missing </ul> before </div>
use_scenario.html:57:1 (use_scenario.Rd:24): Warning: <h3> anchor "scenario" already defined
verbose.dcm.html:58:1 (verbose.dcm.Rd:17): Warning: missing </ul> before </div>
verbose.icm.html:62:1 (verbose.icm.Rd:19): Warning: missing </ul> before </div>
verbose.net.html:62:1 (verbose.net.Rd:19): Warning: missing </ul> before </div>
checkRd: (-1) runSim.Rd:111: Lost braces
   111 | \ifelse{html}{\out{<i>r</i><sub>1</sub> = 1}}{{\eqn{r_1 = 1}}{r_1 = 1}} while the individual with the lowest phenotypic value
       |                                                              ^
checkRd: (-1) runSim.Rd:112: Lost braces
   112 | is given the rank \ifelse{html}{\out{<i>r<sub>n</sub></i> = <i>n</i>}}{{\eqn{r_n = n}}{r_n = n}}), the probability of an individual
       |                                                                                       ^
checkRd: (-1) runSim.Rd:120-122: Lost braces
   120 | }{
       |  ^
Found the following HTML validation problems:
fit_model.html:52:1 (fit_model.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
epiparameterDB.html:50:1 (epiparameterDB.Rd:14): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Nassim AYAD [aut, cre] (<https://orcid.org/0000-0002-1809-0935>, Laboratory of Modeling and Biostatistics, Pasteur Institute of Algeria)’
  Authors@R: ‘Nassim AYAD [aut, cre] (ORCID: <https://orcid.org/0000-0002-1809-0935>, affiliation: Laboratory of Modeling and Biostatistics, Pasteur Institute of Algeria)’
Maintainer: ‘Bilge Baser <bilge.baser@msgsu.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bilge",
                    family = "Baser",
                    role = c("aut", "cre"),
                    email = "bilge.baser@msgsu.edu.tr")
as necessary.
Maintainer: ‘Stuart Lacy <stuart.lacy@york.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stuart",
                    family = "Lacy",
                    role = c("aut", "cre"),
                    email = "stuart.lacy@york.ac.uk")
as necessary.
Maintainer: ‘Adam Omidpanah <adam.omidpanah@wsu.edu>’

Found the following (possibly) invalid file URI:
  URI: www.colorbrewer.org
    From: man/colorbrewer.Rd
Found the following HTML validation problems:
epiworldR-deprecated.html:73:1 (epiworldR-deprecated.Rd:34): Warning: missing </ul> before </div>
Found the following HTML validation problems:
DiseaseModel.html:383:1 (DiseaseModel.Rd:281): Warning: missing </ul> before </div>
DiseaseModel.html:290:1 (DiseaseModel.Rd:228): Warning: <h5> anchor "Usage" already defined
DiseaseModel.html:296:1 (DiseaseModel.Rd:232): Warning: <h5> anchor "Arguments" already defined
DiseaseModel.html:323:1 (DiseaseModel.Rd:249): Warning: <h5> anchor "Usage" already defined
DiseaseModel.html:329:1 (DiseaseModel.Rd:253): Warning: <h5> anchor "Arguments" already defined
DiseaseModel.html:360:1 (DiseaseModel.Rd:270): Warning: <h5> anchor "Usage" already defined
DiseaseModel.html:366:1 (DiseaseModel.Rd:274): Warning: <h5> anchor "Arguments" already defined
SimulationHandler.html:325:1 (SimulationHandler.Rd:206): Warning: missing </ul> before </div>
SimulationHandler.html:180:1 (SimulationHandler.Rd:117): Warning: <h5> anchor "Usage" already defined
SimulationHandler.html:186:1 (SimulationHandler.Rd:121): Warning: <h5> anchor "Arguments" already defined
SimulationHandler.html:222:1 (SimulationHandler.Rd:143): Warning: <h5> anchor "Usage" already defined
SimulationHandler.html:228:1 (SimulationHandler.Rd:147): Warning: <h5> anchor "Arguments" already defined
SimulationHandler.html:261:1 (SimulationHandler.Rd:170): Warning: <h5> anchor "Usage" already defined
SimulationHandler.html:267:1 (SimulationHandler.Rd:174): Warning: <h5> anchor "Arguments" already defined
SimulationHandler.html:282:1 (SimulationHandler.Rd:183): Warning: <h5> anchor "Returns" already defined
SimulationHandler.html:302:1 (SimulationHandler.Rd:195): Warning: <h5> anchor "Usage" already defined
SimulationHandler.html:308:1 (SimulationHandler.Rd:199): Warning: <h5> anchor "Arguments" already defined
Running examples in ‘epocakir-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GFR_staging
> ### Title: GFR Staging
> ### Aliases: GFR_staging GFR_staging.data.frame GFR_staging.units
> ###   GFR_staging.numeric
> 
> ### ** Examples
> 
> df <- tibble::tibble(
+   eGFR = units::set_units(c(-1, NA, 100, 70, 50, 35, 20, 10), "mL/min/1.73m2")
+ )
> 
> GFR_staging(df, "eGFR")
Error: cannot convert mL/(min*1.73m^2) into mL/min
Execution halted
Running ‘testthat.R’ [13s/18s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(epocakir)
  > 
  > test_check("epocakir")
  [ FAIL 1 | WARN 9 | SKIP 0 | PASS 598 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ckd.R:378:3'): GFR_staging() ───────────────────────────────────
  Error: cannot convert mL/(min*1.73m^2) into mL/min
  Backtrace:
       ▆
    1. ├─epocakir::GFR_staging(df, "eGFR") at test-ckd.R:378:3
    2. └─epocakir:::GFR_staging.data.frame(df, "eGFR")
    3.   ├─epocakir::GFR_staging(.data[[rlang::as_name(rlang::enquo(GFR))]])
    4.   └─epocakir:::GFR_staging.units(.data[[rlang::as_name(rlang::enquo(GFR))]])
    5.     ├─epocakir::GFR_staging(as_metric(GFR = GFR, value_only = TRUE))
    6.     └─epocakir::as_metric(GFR = GFR, value_only = TRUE)
    7.       ├─units::set_units(meas, conversion$metric_units, mode = "standard")
    8.       └─units:::set_units.units(meas, conversion$metric_units, mode = "standard")
    9.         ├─base::`units<-`(`*tmp*`, value = as_units(value, ...))
   10.         └─units:::`units<-.units`(`*tmp*`, value = as_units(value, ...))
  
  [ FAIL 1 | WARN 9 | SKIP 0 | PASS 598 ]
  Error: Test failures
  Execution halted
Found the following HTML validation problems:
dot-checkIndex.html:50:1 (dot-checkIndex.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Emmanuel Arnhold <emmanuelarnhold@yahoo.com.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emmanuel",
                    family = "Arnhold",
                    role = c("aut", "cre"),
                    email = "emmanuelarnhold@yahoo.com.br")
as necessary.
Maintainer: ‘Steven E. Pav <shabbychef@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
NEWS.html:44:81 (NEWS.Rd:16): Warning: missing </p> before <a>
NEWS.html:44:5 (NEWS.Rd:16): Warning: missing </a> before <a>
NEWS.html:44:208 (NEWS.Rd:16): Warning: inserting implicit <p>
NEWS.html:44:212 (NEWS.Rd:16): Warning: discarding unexpected </a>
NEWS.html:44:81 (NEWS.Rd:16): Warning: trimming empty <p>
NEWS.html:44:208 (NEWS.Rd:16): Warning: trimming empty <p>
Maintainer: ‘Jabed Tomal <jtomal@tru.ca>’

The Description field contains
  <arXiv:1706.06971> for more details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Thorn Thaler <thorn.thaler@thothal.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thorn",
                    family = "Thaler",
                    role = c("aut", "cre"),
                    email = "thorn.thaler@thothal.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jun Li <jli49@kent.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jun",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "jli49@kent.edu"),
               person(given = c("Song", "Xi"),
                      family = "Chen",
                      role = "aut"),
               person(given = "Lingjun",
                      family = "Li",
                      role = "ctb"),
               person(given = "Clay",
                      family = "James",
                      role = "ctb"))
as necessary.

The Description field contains
  (2012) <arXiv:1206.0917>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Anthony Albano <tony.d.albano@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anthony",
                    family = "Albano",
                    role = c("aut", "cre"),
                    email = "tony.d.albano@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Bill Denney <wdenney@humanpredictions.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Kathrin Moellenhoff <kathrin.moellenhoff@rub.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kathrin",
                    family = "Moellenhoff",
                    role = c("aut", "cre"),
                    email = "kathrin.moellenhoff@rub.de")
as necessary.

The Description field contains
  equivalence in time-to-event data <arXiv:2009.06699>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Stefan Wellek <stefan.wellek@zi-mannheim.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stefan",
                      family = "Wellek",
                      role = c("aut", "cre"),
                      email = "stefan.wellek@zi-mannheim.de"),
               person(given = "Peter",
                      family = "Ziegler",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
export2CEF.html:59:1 (export2CEF.Rd:17): Warning: missing </ul> before </div>
export2MSP.html:68:1 (export2MSP.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Isabel Serra <iserra@crm.cat>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Joan", "del"),
                      family = "Castillo",
                      role = "aut"),
               person(given = c("David", "Moriña"),
                      family = "Soler",
                      role = "aut"),
               person(given = "Isabel",
                      family = "Serra",
                      role = c("aut", "cre"),
                      email = "iserra@crm.cat"))
as necessary.
checkRd: (-1) Tm.Rd:46-48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Tm.Rd:49-51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Tm.Rd:52-54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Tm.Rd:55-57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Tm.Rd:58-60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitpot.Rd:36-39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitpot.Rd:40-42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitpot.Rd:43-46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitpot.Rd:47-49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:54-56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:57-59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:60-62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:63-65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:66-68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:69-71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:72-74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) thrselect.Rd:75-77: Lost braces in \itemize; \value handles \item{}{} directly
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘render_erd.R’
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:276:1 (inst/NEWS.Rd:240): Warning: missing </ul> before </div>
NEWS.html:47:1 (inst/NEWS.Rd:85): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:77:1 (inst/NEWS.Rd:107): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:122:1 (inst/NEWS.Rd:137): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:135:1 (inst/NEWS.Rd:146): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:152:1 (inst/NEWS.Rd:158): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:163:1 (inst/NEWS.Rd:166): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:178:1 (inst/NEWS.Rd:179): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:197:1 (inst/NEWS.Rd:191): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:214:1 (inst/NEWS.Rd:202): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:233:1 (inst/NEWS.Rd:216): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:261:1 (inst/NEWS.Rd:235): Warning: <h4> anchor "NEW-FEATURES" already defined
Found the following HTML validation problems:
Binomial-ergmReference-cdff43a4.html:64:1 (Binomial-ergmReference-cdff43a4.Rd:25): Warning: missing </ul> before </div>
CMB-ergmTerm-5a51afe9.html:72:1 (CMB-ergmTerm-5a51afe9.Rd:31): Warning: missing </ul> before </div>
CMP-ergmTerm-4d501174.html:62:1 (CMP-ergmTerm-4d501174.Rd:27): Warning: missing </ul> before </div>
Disc-ergmProposal-b6c6e5ca.html:53:1 (Disc-ergmProposal-b6c6e5ca.Rd:22): Warning: missing </ul> before </div>
DiscTNT-ergmProposal-c3c2e8cb.html:55:1 (DiscTNT-ergmProposal-c3c2e8cb.Rd:24): Warning: missing </ul> before </div>
Geometric-ergmReference-1ee5c5ac.html:57:1 (Geometric-ergmReference-1ee5c5ac.Rd:25): Warning: missing </ul> before </div>
Poisson-ergmReference-40df5ec8.html:90:1 (Poisson-ergmReference-40df5ec8.Rd:51): Warning: missing </ul> before </div>
ZIPoisson-ergmProposal-bba55a81.html:49:1 (ZIPoisson-ergmProposal-bba55a81.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Jenine K. Harris <harrisj@wustl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jenine", "K."),
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "harrisj@wustl.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  nvertex.Rd: network
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:324:1 (inst/NEWS.Rd:272): Warning: missing </ul> before </div>
NEWS.html:146:1 (inst/NEWS.Rd:155): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:159:1 (inst/NEWS.Rd:164): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:172:1 (inst/NEWS.Rd:173): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:194:1 (inst/NEWS.Rd:190): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:208:1 (inst/NEWS.Rd:198): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:223:1 (inst/NEWS.Rd:209): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:240:1 (inst/NEWS.Rd:219): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:255:1 (inst/NEWS.Rd:229): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:268:1 (inst/NEWS.Rd:238): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:286:1 (inst/NEWS.Rd:250): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:308:1 (inst/NEWS.Rd:265): Warning: <h4> anchor "NEW-FEATURES" already defined
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:229:1 (inst/NEWS.Rd:202): Warning: missing </ul> before </div>
NEWS.html:54:1 (inst/NEWS.Rd:93): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:69:1 (inst/NEWS.Rd:104): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:108:1 (inst/NEWS.Rd:128): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:130:1 (inst/NEWS.Rd:143): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:141:1 (inst/NEWS.Rd:149): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:156:1 (inst/NEWS.Rd:158): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:171:1 (inst/NEWS.Rd:171): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:182:1 (inst/NEWS.Rd:177): Warning: <h4> anchor "OTHER-USER-VISIBLE-CHANGES" already defined
NEWS.html:193:1 (inst/NEWS.Rd:183): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:211:1 (inst/NEWS.Rd:195): Warning: <h4> anchor "NEW-FEATURES" already defined
Found the following HTML validation problems:
AlterSwap-ergmProposal-7e827ae4.html:49:1 (AlterSwap-ergmProposal-7e827ae4.Rd:18): Warning: missing </ul> before </div>
CompleteOrder-ergmReference-f40141c3.html:48:1 (CompleteOrder-ergmReference-f40141c3.Rd:16): Warning: missing </ul> before </div>
rankdeference-ergmTerm-73181c43.html:53:1 (rankdeference-ergmTerm-73181c43.Rd:21): Warning: missing </ul> before </div>
rankedgecov-ergmTerm-5905bc22.html:75:1 (rankedgecov-ergmTerm-5905bc22.Rd:35): Warning: missing </ul> before </div>
rankinconsistency-ergmTerm-b232ab56.html:90:1 (rankinconsistency-ergmTerm-b232ab56.Rd:46): Warning: missing </ul> before </div>
ranknodeicov-ergmTerm-856bed59.html:59:1 (ranknodeicov-ergmTerm-856bed59.Rd:20): Warning: missing </ul> before </div>
ranknonconformity-ergmTerm-a4593778.html:100:1 (ranknonconformity-ergmTerm-a4593778.Rd:46): Warning: missing </ul> before </div>
Maintainer: ‘Renfei Mao <renfeimao@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Renfei",
                    family = "Mao",
                    role = c("aut", "cre"),
                    email = "renfeimao@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘erlang_c_app.R’
Found the following HTML validation problems:
attach_startdate_agg.html:46:1 (attach_startdate_agg.Rd:10): Warning: missing </ul> before </div>
check_cl.input_format.html:59:1 (check_cl.input_format.Rd:16): Warning: missing </ul> before </div>
check_dist.html:46:1 (check_dist.Rd:10): Warning: missing </ul> before </div>
check_for_deconv.html:50:1 (check_for_deconv.Rd:12): Warning: missing </ul> before </div>
check_prm.R.html:50:1 (check_prm.R.Rd:12): Warning: missing </ul> before </div>
check_prm.daily.html:46:1 (check_prm.daily.Rd:10): Warning: missing </ul> before </div>
check_prm.daily.check.html:46:1 (check_prm.daily.check.Rd:10): Warning: missing </ul> before </div>
check_prm.smooth.html:46:1 (check_prm.smooth.Rd:10): Warning: missing </ul> before </div>
cl.data.html:65:1 (cl.data.Rd:21): Warning: missing </ul> before </div>
correct_underreporting.html:50:1 (correct_underreporting.Rd:12): Warning: missing </ul> before </div>
deconv.html:58:1 (deconv.Rd:16): Warning: missing </ul> before </div>
estimate_R_cl_single.html:103:1 (estimate_R_cl_single.Rd:44): Warning: missing </ul> before </div>
fit_jags_aggreg.html:111:1 (fit_jags_aggreg.Rd:42): Warning: missing </ul> before </div>
na_to_0.html:46:1 (na_to_0.Rd:10): Warning: missing </ul> before </div>
reports_to_incidence.html:68:1 (reports_to_incidence.Rd:24): Warning: missing </ul> before </div>
reshape_fit_jags.html:46:1 (reshape_fit_jags.Rd:10): Warning: missing </ul> before </div>
sample_a_dist.html:49:1 (sample_a_dist.Rd:12): Warning: missing </ul> before </div>
sample_from_dist.html:52:1 (sample_from_dist.Rd:13): Warning: missing </ul> before </div>
sample_post_ee.html:54:1 (sample_post_ee.Rd:14): Warning: missing </ul> before </div>
summarise_by_date_iters.html:46:1 (summarise_by_date_iters.Rd:10): Warning: missing </ul> before </div>
ww.data.html:62:1 (ww.data.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘David Causeur <david.causeur@agrocampus-ouest.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Causeur",
                      role = c("aut", "cre"),
                      email = "david.causeur@agrocampus-ouest.fr"),
               person(given = "Ching-Fan",
                      family = "Sheu",
                      role = "aut"),
               person(given = "Mei-Chen",
                      family = "Chu",
                      role = "aut"),
               person(given = "Flavia",
                      family = "Rufini",
                      role = "aut"))
as necessary.
checkRd: (-1) ifa.Rd:16: Lost braces; missing escapes or markup?
    16 | If Sigma has the q-factor decomposition Sigma=diag(Psi)+BB', then Sigma^{-1} 
       |                                                                         ^
checkRd: (-1) ifa.Rd:17: Lost braces; missing escapes or markup?
    17 | has the corresponding q-factor decomposition Sigma^{-1}=diag(phi)(I-theta theta')diag(phi), where theta is a mxq matrix and phi the vector of 
       |                                                    ^
checkRd: (-1) ifa.Rd:21: Lost braces; missing escapes or markup?
    21 | \item{iSB}{m x q matrix (diag(Psi)+BB')^{-1}B.}
       |                                         ^
checkRd: (-1) isqrtfa.Rd:15: Lost braces; missing escapes or markup?
    15 | If Sigma has the q-factor decomposition Sigma=diag(Psi)+BB', then the function returns a matrix Omega such that Sigma^{-1} = Omega Omega'. Equivalently,
       |                                                                                                                       ^
Found the following HTML validation problems:
cat_coefficients.html:51:1 (cat_coefficients.Rd:12): Warning: missing </ul> before </div>
expect_values.html:58:1 (expect_values.Rd:16): Warning: missing </ul> before </div>
mip_rule.html:50:1 (mip_rule.Rd:12): Warning: missing </ul> before </div>
translate_mip_lp.html:58:1 (translate_mip_lp.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Catherine B. Hurley <catherine.hurley@mu.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Catherine", "B."),
                    family = "Hurley",
                    role = c("aut", "cre"),
                    email = "catherine.hurley@mu.ie")
as necessary.
Maintainer: ‘Merlin Unterfinger <info@munterfinger.ch>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Matteo Fasiolo <matteo.fasiolo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Matteo",
                      family = "Fasiolo",
                      role = c("aut", "cre"),
                      email = "matteo.fasiolo@gmail.com"),
               person(given = c("Simon", "N."),
                      family = "Wood",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) enp.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enp.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) evolat.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) evolat.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) psns.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) psns.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
parameter_definition.html:66:1 (parameter_definition.Rd:20): Warning: missing </ul> before </div>
Found the following HTML validation problems:
CorrelatedPatientSample.html:150:1 (CorrelatedPatientSample.Rd:96): Warning: <h5> anchor "Usage" already defined
CorrelatedPatientSample.html:156:1 (CorrelatedPatientSample.Rd:100): Warning: <h5> anchor "Arguments" already defined
CorrelatedPatientSample.html:179:1 (CorrelatedPatientSample.Rd:113): Warning: <h5> anchor "Usage" already defined
CorrelatedPatientSample.html:185:1 (CorrelatedPatientSample.Rd:117): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:153:1 (PatientSample.Rd:92): Warning: <h5> anchor "Usage" already defined
PatientSample.html:164:1 (PatientSample.Rd:101): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:195:1 (PatientSample.Rd:122): Warning: <h5> anchor "Usage" already defined
PatientSample.html:201:1 (PatientSample.Rd:126): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:224:1 (PatientSample.Rd:139): Warning: <h5> anchor "Usage" already defined
PatientSample.html:230:1 (PatientSample.Rd:143): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:253:1 (PatientSample.Rd:156): Warning: <h5> anchor "Usage" already defined
PatientSample.html:259:1 (PatientSample.Rd:160): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:286:1 (PatientSample.Rd:177): Warning: <h5> anchor "Usage" already defined
PatientSample.html:292:1 (PatientSample.Rd:181): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:315:1 (PatientSample.Rd:194): Warning: <h5> anchor "Usage" already defined
PatientSample.html:321:1 (PatientSample.Rd:198): Warning: <h5> anchor "Arguments" already defined
PatientSample.html:348:1 (PatientSample.Rd:215): Warning: <h5> anchor "Usage" already defined
PatientSample.html:354:1 (PatientSample.Rd:219): Warning: <h5> anchor "Arguments" already defined
check_simulations_consistency.html:46:1 (check_simulations_consistency.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
data_bodywellf.html:56:1 (data_bodywellf.Rd:15): Warning: missing </ul> before </div>
data_bodywellfm.html:56:1 (data_bodywellfm.Rd:15): Warning: missing </ul> before </div>
data_bodywellm.html:56:1 (data_bodywellm.Rd:15): Warning: missing </ul> before </div>
data_campus_involvement.html:69:1 (data_campus_involvement.Rd:19): Warning: missing </ul> before </div>
data_chap_8_paired_ex_8.18.html:59:1 (data_chap_8_paired_ex_8.18.Rd:17): Warning: missing </ul> before </div>
data_college_survey_1.html:98:1 (data_college_survey_1.Rd:36): Warning: missing </ul> before </div>
data_college_survey_2.html:85:1 (data_college_survey_2.Rd:30): Warning: missing </ul> before </div>
data_damischrcj.html:61:1 (data_damischrcj.Rd:18): Warning: missing </ul> before </div>
data_exam_scores.html:62:1 (data_exam_scores.Rd:16): Warning: missing </ul> before </div>
data_home_prices.html:71:1 (data_home_prices.Rd:21): Warning: missing </ul> before </div>
data_labels_flavor.html:75:1 (data_labels_flavor.Rd:19): Warning: missing </ul> before </div>
data_religious_belief.html:60:1 (data_religious_belief.Rd:16): Warning: missing </ul> before </div>
data_sleep_beauty.html:61:1 (data_sleep_beauty.Rd:15): Warning: missing </ul> before </div>
data_smithrecall.html:63:1 (data_smithrecall.Rd:19): Warning: missing </ul> before </div>
data_thomason_1.html:63:1 (data_thomason_1.Rd:16): Warning: missing </ul> before </div>
esci_plot_difference_axis_x.html:78:1 (esci_plot_difference_axis_x.Rd:31): Warning: missing </ul> before </div>
print.esci_estimate.html:63:1 (print.esci_estimate.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Lauren Eyler Dang <lauren.eyler@berkeley.edu>’

The Description field contains
  <arXiv:2210.05802>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Zhao Yang <yangz98@connect.hku.hk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhao",
                      family = "Yang",
                      role = c("aut", "cre"),
                      email = "yangz98@connect.hku.hk"),
               person(given = "Ruitao",
                      family = "Lin",
                      role = "aut"),
               person(given = "Guosheng",
                      family = "Yin",
                      role = "aut"),
               person(given = "Ying",
                      family = "Yuan",
                      role = "aut"))
as necessary.
Maintainer: ‘Satoshi Aoki <aokis1ll1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Satoshi",
                    family = "Aoki",
                    role = c("aut", "cre"),
                    email = "aokis1ll1@gmail.com")
as necessary.
Found the following HTML validation problems:
eSDM_GUI.html:48:1 (eSDM_GUI.Rd:11): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘esem_cfa_syntax.R’
Maintainer: ‘Wassim Youssef <Wassim.G.Youssef@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean-Charles",
                      family = "Croix",
                      role = "aut"),
               person(given = "Thierry",
                      family = "Moudiki",
                      role = "aut"),
               person(given = "Frédéric",
                      family = "Planchet",
                      role = "aut"),
               person(given = "Wassim",
                      family = "Youssef",
                      role = c("aut", "cre"),
                      email = "wassim.g.youssef@gmail.com"))
as necessary.
Found the following HTML validation problems:
Bond_PriceDistribution.html:52:1 (Bond_PriceDistribution.Rd:12): Warning: missing </ul> before </div>
CBond_PriceDistribution.html:56:1 (CBond_PriceDistribution.Rd:14): Warning: missing </ul> before </div>
CDSPremium_PriceDistribution.html:49:1 (CDSPremium_PriceDistribution.Rd:10): Warning: missing </ul> before </div>
ConvBond_PriceDistribution.html:60:1 (ConvBond_PriceDistribution.Rd:17): Warning: missing </ul> before </div>
EuroCall_Stock_PriceDistribution.html:48:1 (EuroCall_Stock_PriceDistribution.Rd:10): Warning: missing </ul> before </div>
EuroCall_ZC_PriceDistribution.html:52:1 (EuroCall_ZC_PriceDistribution.Rd:12): Warning: missing </ul> before </div>
EuroPut_Stock_PriceDistribution.html:48:1 (EuroPut_Stock_PriceDistribution.Rd:10): Warning: missing </ul> before </div>
EuroPut_ZC_PriceDistribution.html:52:1 (EuroPut_ZC_PriceDistribution.Rd:12): Warning: missing </ul> before </div>
ZCBond_PriceDistribution.html:44:1 (ZCBond_PriceDistribution.Rd:8): Warning: missing </ul> before </div>
setRiskParamsScenariosRE.html:55:1 (setRiskParamsScenariosRE.Rd:13): Warning: missing </ul> before </div>
setRiskParamsScenariosS.html:59:1 (setRiskParamsScenariosS.Rd:15): Warning: missing </ul> before </div>
setRiskParamsScenariosdefSpr.html:55:1 (setRiskParamsScenariosdefSpr.Rd:13): Warning: missing </ul> before </div>
setRiskParamsScenariosliqSpr.html:46:1 (setRiskParamsScenariosliqSpr.Rd:8): Warning: missing </ul> before </div>
setRiskParamsScenariosrt.html:46:1 (setRiskParamsScenariosrt.Rd:8): Warning: missing </ul> before </div>
checkRd: (-1) USA_state_N.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) USA_state_N.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) confirmed.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) confirmed.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) death.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) death.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) recovered.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) recovered.Rd:11: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Marcel Miché <esmprep@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marcel",
                    family = "Miché",
                    role = c("aut", "cre"),
                    email = "esmprep@gmail.com")
as necessary.
Found the following HTML validation problems:
G1_fun.html:59:1 (G1_fun.Rd:16): Warning: missing </ul> before </div>
G1_prime_fun.html:59:1 (G1_prime_fun.Rd:16): Warning: missing </ul> before </div>
G1_prime_prime_fun.html:59:1 (G1_prime_prime_fun.Rd:16): Warning: missing </ul> before </div>
G2_curly_fun.html:68:1 (G2_curly_fun.Rd:19): Warning: missing </ul> before </div>
G2_fun.html:68:1 (G2_fun.Rd:19): Warning: missing </ul> before </div>
G2_prime_fun.html:68:1 (G2_prime_fun.Rd:19): Warning: missing </ul> before </div>
G2_prime_prime.html:68:1 (G2_prime_prime.Rd:19): Warning: missing </ul> before </div>
G_vec.html:55:1 (G_vec.Rd:15): Warning: missing </ul> before </div>
cdf_at_quantile.html:55:1 (cdf_at_quantile.Rd:14): Warning: missing </ul> before </div>
conditional_mean_sigma.html:50:1 (conditional_mean_sigma.Rd:12): Warning: missing </ul> before </div>
conditional_truncated_variance.html:66:1 (conditional_truncated_variance.Rd:14): Warning: missing </ul> before </div>
esr_rho_lp.html:70:1 (esr_rho_lp.Rd:22): Warning: missing </ul> before </div>
estfun.esreg.html:53:1 (estfun.esreg.Rd:12): Warning: missing </ul> before </div>
lambda_matrix.html:79:1 (lambda_matrix.Rd:25): Warning: missing </ul> before </div>
sigma_matrix.html:66:1 (sigma_matrix.Rd:19): Warning: missing </ul> before </div>
vcov.esreg.html:55:1 (vcov.esreg.Rd:14): Warning: missing </ul> before </div>
vcovA.html:107:1 (vcovA.Rd:38): Warning: missing </ul> before </div>
vcovB.html:61:1 (vcovB.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Andrew Simmons <akwsimmo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Simmons",
                    role = c("aut", "cre"),
                    email = "akwsimmo@gmail.com")
as necessary.
File ‘essentials/libs/essentials.so’:
  Found non-API calls to R: ‘IS_S4_OBJECT’, ‘OBJECT’, ‘UNSET_S4_OBJECT’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Housen Li <housen.li@outlook.com>’

The Description field contains
  <arXiv:1612.07216>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Mads Lindskou <mads@math.aau.dk>’

The Description field contains
  Garofalakis, Michael I Jordan (2013) <arXiv:1301.2267>. The ESS
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
as_adj_lst.html:46:1 (as_adj_lst.Rd:10): Warning: missing </ul> before </div>
print.gengraph.html:51:1 (print.gengraph.Rd:12): Warning: missing </ul> before </div>
print.tree.html:51:1 (print.tree.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jorge Cimentada <cimentadaj@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
print.resumen.html:51:1 (print.resumen.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
estat_api.html:54:1 (estat_api.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Cengiz Zopluoglu <cen.zop@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Cengiz",
                    family = "Zopluoglu",
                    role = c("aut", "cre"),
                    email = "cen.zop@gmail.com")
as necessary.
Maintainer: ‘Ladislas Nalborczyk <ladislas.nalborczyk@gmail.com>’

The Description field contains
  <arXiv:1704.02030v3>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) aic.Rd:25: Escaped LaTeX specials: \&
checkRd: (-1) aic.Rd:29: Escaped LaTeX specials: \&
checkRd: (-1) ictab.Rd:56: Escaped LaTeX specials: \&
checkRd: (-1) ictab.Rd:60: Escaped LaTeX specials: \&
checkRd: (-1) ictab.Rd:64: Escaped LaTeX specials: \&
Maintainer: ‘Giulio Costantini <giulio.costantini@unimib.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giulio",
                      family = "Costantini",
                      role = c("aut", "cre"),
                      email = "giulio.costantini@unimib.it"),
               person(given = "Nils",
                      family = "Kappelmann",
                      role = "aut"),
               person(given = "Sacha",
                      family = "Epskamp",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
extract.lm_robust.html:114:1 (extract.lm_robust.Rd:62): Warning: missing </ul> before </div>
lm_robust_fit.html:118:1 (lm_robust_fit.Rd:54): Warning: missing </ul> before </div>
Maintainer: ‘Xuan You <youxuan90@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xuan",
                      family = "You",
                      role = c("aut", "cre"),
                      email = "youxuan90@gmail.com"),
               person(given = "Yichen",
                      family = "Cheng",
                      role = "aut",
                      email = "ycheng11@gsu.edu"))
as necessary.
Maintainer: ‘Rodrigo R Remédio <rremedio@hotmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘wooldridge.Rd’:
    https://doi.org/10.1016/j.econlet.2009.04.026
Found the following HTML validation problems:
combination_with_repetition.html:50:1 (combination_with_repetition.Rd:12): Warning: missing </ul> before </div>
poly_elements.html:50:1 (poly_elements.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
coh.html:66:1 (coh.Rd:20): Warning: missing </ul> before </div>
descrip_stats.html:51:1 (descrip_stats.Rd:15): Warning: missing </ul> before </div>
ecdf_fun.html:64:1 (ecdf_fun.Rd:23): Warning: missing </ul> before </div>
hedg.html:54:1 (hedg.Rd:14): Warning: missing </ul> before </div>
paired_ecdf.html:64:1 (paired_ecdf.Rd:23): Warning: missing </ul> before </div>
psd.html:58:1 (psd.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Andreas Schulz <ades-s@web.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Schulz",
                    role = c("aut", "cre"),
                    email = "ades-s@web.de")
as necessary.
Found the following HTML validation problems:
bwd.nrd.html:70:1 (bwd.nrd.Rd:26): Warning: <h3> anchor "_sec_note" already defined
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  catalog.Rd: inside.owin
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mario Hasler <hasler@email.uni-kiel.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mario",
                    family = "Hasler",
                    role = c("aut", "cre"),
                    email = "hasler@email.uni-kiel.de")
as necessary.
checkRd: (-1) ETC-package.Rd:28-29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ETC-package.Rd:30-31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ETC-package.Rd:32: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Jan Wijffels <jwijffels@bnosac.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jan",
                    family = "Wijffels",
                    role = c("aut", "cre"),
                    email = "jwijffels@bnosac.be")
as necessary.
Maintainer: ‘Riccardo Giubilei <riccardogbl@gmail.com>’

The Description field contains
  Giubilei et al. (2022) <arXiv:2207.04430>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) data_cls.Rd:24: Lost braces
    24 | \item Graphs: Erd\"{o}s-R\'{e}nyi graphs with connection probability 0.10 for
       |                    ^
checkRd: (-1) data_cls.Rd:24: Lost braces
    24 | \item Graphs: Erd\"{o}s-R\'{e}nyi graphs with connection probability 0.10 for
       |                            ^
checkRd: (-1) data_reg.Rd:21: Lost braces
    21 | \item Graphs: Erd\"{o}s-R\'{e}nyi graphs with connection probability given by
       |                    ^
checkRd: (-1) data_reg.Rd:21: Lost braces
    21 | \item Graphs: Erd\"{o}s-R\'{e}nyi graphs with connection probability given by
       |                            ^
Found the following HTML validation problems:
dot-onLoad.html:57:1 (dot-onLoad.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Anders D. Sleire <sleire@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Anders", "D."),
                    family = "Sleire",
                    role = c("aut", "cre"),
                    email = "sleire@gmail.com")
as necessary.
Maintainer: ‘Matthew Stephens <mstephens@uchicago.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Stephens",
                    role = c("aut", "cre"),
                    email = "mstephens@uchicago.edu")
as necessary.
Found the following HTML validation problems:
df_to_char.html:46:1 (df_to_char.Rd:10): Warning: missing </ul> before </div>
plot.dot_plot.html:51:1 (plot.dot_plot.Rd:12): Warning: missing </ul> before </div>
print.dot_plot.html:51:1 (print.dot_plot.Rd:12): Warning: missing </ul> before </div>
print.safety_summary.html:51:1 (print.safety_summary.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘elx_run_query.R’
Found the following HTML validation problems:
dot-inheritParams.html:82:1 (dot-inheritParams.Rd:30): Warning: missing </ul> before </div>
Maintainer: ‘Leo Lahti <leo.lahti@iki.fi>’

Found the following (possibly) invalid URLs:
  URL: https://app.gitter.im/#/room/#rOpenGov_eurostat:gitter.im
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment
  URL: https://app.gitter.im/#/room/#rOpenGov_eurostat:gitter.im?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment
Found the following HTML validation problems:
convert_time_col.html:51:1 (convert_time_col.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Fahimeh Nezhadmoghadam <f.nejad.moghadam@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Fahimeh", "Nezhadmoghadam,Jose", "Gerardo"),
                      family = "Tamez-Pena",
                      role = "aut"),
               person(given = "Fahimeh",
                      family = "Nezhadmoghadam",
                      role = "cre",
                      email = "f.nejad.moghadam@gmail.com"))
as necessary.
checkRd: (-1) FuzzyCluster.Rd:15: Lost braces; missing escapes or markup?
    15 | A list of cluster labels and a R object of class "fcm {ppclust}"
       |                                                       ^
checkRd: (-1) pamCluster.Rd:15: Lost braces; missing escapes or markup?
    15 | A list of cluster labels and a R object of class "pam {cluster}"
       |                                                       ^
Maintainer: ‘Michael Lingzhi Li <mili@hbs.edu>’

The Description field contains
  <arXiv:1905.05389>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
compute_qoi.html:50:1 (compute_qoi.Rd:12): Warning: missing </ul> before </div>
compute_qoi_user.html:70:1 (compute_qoi_user.Rd:22): Warning: missing </ul> before </div>
create_ml_args.html:46:1 (create_ml_args.Rd:10): Warning: missing </ul> before </div>
create_ml_args_bart.html:46:1 (create_ml_args_bart.Rd:10): Warning: missing </ul> before </div>
create_ml_args_bartc.html:46:1 (create_ml_args_bartc.Rd:10): Warning: missing </ul> before </div>
create_ml_args_causalforest.html:46:1 (create_ml_args_causalforest.Rd:10): Warning: missing </ul> before </div>
create_ml_args_lasso.html:46:1 (create_ml_args_lasso.Rd:10): Warning: missing </ul> before </div>
create_ml_args_superLearner.html:46:1 (create_ml_args_superLearner.Rd:10): Warning: missing </ul> before </div>
create_ml_args_svm.html:46:1 (create_ml_args_svm.Rd:10): Warning: missing </ul> before </div>
create_ml_args_svm_cls.html:46:1 (create_ml_args_svm_cls.Rd:10): Warning: missing </ul> before </div>
create_ml_arguments.html:54:1 (create_ml_arguments.Rd:14): Warning: missing </ul> before </div>
print.summary.itr.html:51:1 (print.summary.itr.Rd:12): Warning: missing </ul> before </div>
print.summary.test_itr.html:51:1 (print.summary.test_itr.Rd:12): Warning: missing </ul> before </div>
summary.itr.html:51:1 (summary.itr.Rd:12): Warning: missing </ul> before </div>
summary.test_itr.html:51:1 (summary.test_itr.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
binary_operators_ref.html:40:1 (binary_operators_ref.Rd:7): Warning: missing </ul> before </div>
map_ref.html:40:1 (map_ref.Rd:7): Warning: missing </ul> before </div>
mapping_names_ref.html:40:1 (mapping_names_ref.Rd:7): Warning: missing </ul> before </div>
pval_ref.html:40:1 (pval_ref.Rd:7): Warning: missing </ul> before </div>
singular_operators_ref.html:40:1 (singular_operators_ref.Rd:7): Warning: missing </ul> before </div>
text_ref.html:40:1 (text_ref.Rd:7): Warning: missing </ul> before </div>
tree_ref.html:40:1 (tree_ref.Rd:7): Warning: missing </ul> before </div>
valid_functions_ref.html:40:1 (valid_functions_ref.Rd:7): Warning: missing </ul> before </div>
Found the following HTML validation problems:
create_traceback.html:47:1 (create_traceback.Rd:11): Warning: missing </ul> before </div>
local_reproducible_output.html:81:1 (local_reproducible_output.Rd:28): Warning: missing </ul> before </div>
try_capture_stack.html:51:1 (try_capture_stack.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
threshold_selection.html:82:1 (threshold_selection.Rd:34): Warning: missing </ul> before </div>
Maintainer: ‘Danlu Guo <danlu.guo@unimelb.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Danlu",
                      family = "Guo",
                      role = c("aut", "cre"),
                      email = "danlu.guo@adelaide.edu.au"),
               person(given = "Seth",
                      family = "Westra",
                      role = "aut",
                      email = "swestra@civeng.adelaide.edu.au"),
               person(given = "Tim",
                      family = "Peterson",
                      role = "ctb",
                      email = "tim.peterson@monash.edu"))
as necessary.
Maintainer: ‘Brian Bader <bbader.stat@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Thierry Denoeux <tdenoeux@utc.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thierry",
                    family = "Denoeux",
                    role = c("aut", "cre"),
                    email = "tdenoeux@utc.fr")
as necessary.
Maintainer: ‘Alexander Karlsson <alexander.karlsson@his.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexander",
                    family = "Karlsson",
                    role = c("aut", "cre"),
                    email = "alexander.karlsson@his.se")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Alec Stephenson <alec_stephenson@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Alec", "Stephenson.", "Function", "fbvpot", "by", "Chris"),
                      family = "Ferro.",
                      role = "aut"),
               person(given = "Alec",
                      family = "Stephenson",
                      role = "cre",
                      email = "alec_stephenson@hotmail.com"))
as necessary.
Maintainer: ‘Gert Janssenswillen <gert.janssenswillen@uhasselt.be>’

The BugReports field in DESCRIPTION has
  https://github.com/bupaverse/eventdataR/
which should likely be
  https://github.com/bupaverse/eventdataR/issues
instead.
Maintainer: ‘Sowmya Chandrasekaran <sowzz.17@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘Sowmya Chandrasekaran <sowzz.17@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Found the following HTML validation problems:
print.edObject.html:52:1 (print.edObject.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
calc_ipcw_pos.html:66:1 (calc_ipcw_pos.Rd:20): Warning: missing </ul> before </div>
check_mod_cens.html:47:1 (check_mod_cens.Rd:10): Warning: missing </ul> before </div>
match_cause.html:50:1 (match_cause.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jim Lemon <drjimlemon@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jim",
                      family = "Lemon,",
                      role = "aut",
                      email = "drjimlemon@gmail.com"),
               person(given = "Jim",
                      family = "Lemon",
                      role = "cre",
                      email = "drjimlemon@gmail.com"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Jiafen Gong <jiafen.gong@sickkids.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Dr.", "Lisa", "J", "Strug;", "Dr.", "Zeynep", "Baskurt", "<zeynep.baskurt@sickkids.ca>;", "Bowei", "Xiao", "<bowei.xiao91@gmail.com>;", "Ted", "Chiang"),
                      family = "<theodorechiang@gmail.com>",
                      role = "aut",
                      email = "theodorechiang@gmail.com"),
               person(given = "Jiafen",
                      family = "Gong",
                      role = "cre",
                      email = "jiafen.gong@sickkids.ca"))
as necessary.
checkRd: (-1) calculateGLR.Rd:43: Escaped LaTeX specials: \&
checkRd: (-1) glr.Rd:5: Lost braces
     5 |   Conducts a generalized likelihood ratio test testing whether {\eqn{\beta \in}  (-\code{c},\code{c})}. Covariates can be accommodated.
       |                                                                ^
checkRd: (-1) glr.Rd:34: Lost braces
    34 |   This is a similar function to the main function \code{evian}. Instead of testing H0: \eqn{\beta}=0, it tests for whether H0:{\eqn{\beta \in} (-\code{c},\code{c})}.
       |                                                                                                                               ^
Maintainer: ‘Bikram Karmakar <bkarmakar@ufl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bikram",
                    family = "Karmakar",
                    role = c("aut", "cre"),
                    email = "bkarmakar@ufl.edu")
as necessary.
Maintainer: ‘Robert van Hulst <rvhulst@ubishops.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Robert",
                    family = "van Hulst",
                    role = c("aut", "cre"),
                    email = "rvhulst@ubishops.ca")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/rvhulst/evidence/
which should likely be
  https://github.com/rvhulst/evidence/issues
instead.
checkRd: (-1) Snoring.Rd:21: Escaped LaTeX specials: \&
Found the following HTML validation problems:
createApproximations.html:50:1 (createApproximations.Rd:12): Warning: missing </ul> before </div>
loadCyclopsLibraryForJava.html:48:1 (loadCyclopsLibraryForJava.Rd:12): Warning: missing </ul> before </div>
summarizeChain.html:50:1 (summarizeChain.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
'library' or 'require' call not declared from: ‘ggplot2’
Maintainer: ‘Carl Scarrott <carl.scarrott@canterbury.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Carl",
                      family = "Scarrott",
                      role = c("aut", "cre"),
                      email = "carl.scarrott@canterbury.ac.nz"),
               person(given = "Yang",
                      family = "Hu",
                      role = "aut"),
               person(given = "Alfadino",
                      family = "Akbar",
                      role = "aut"),
               person(given = c("University", "of"),
                      family = "Canterbury",
                      role = "aut"))
as necessary.
checkRd: (-1) fmgammagpd.Rd:183: Lost braces; missing escapes or markup?
   183 |  \item {nlumgammagpd} and {proflumgammagpd} - \code{c(mgshape, mgscale, mgweight[1:(M-1)], sigmau, xi)}
       |                           ^
checkRd: (-1) fmgammagpdcon.Rd:181: Lost braces; missing escapes or markup?
   181 |  \item {nlumgammagpdcon} and {proflumgammagpdcon} - \code{c(mgshape, mgscale, mgweight[1:(M-1)], xi)}
       |                              ^
checkRd: (-1) kernels.Rd:87: Lost braces
    87 | code{\link[evmix:kernels]{kd*}}  and \code{\link[evmix:kernels]{kp*}} give the
       |     ^
Maintainer: ‘Heath Blackmon <coleoguy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Heath",
                      family = "Blackmon",
                      role = c("aut", "cre"),
                      email = "coleoguy@gmail.com"),
               person(given = c("Richard", "H."),
                      family = "Adams",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘SuperMatrix.Rd’:
    \keyword{ SuperMatrix, concatenation, alignment }
Found the following files/directories:
  ‘sample .nwk’
Maintainer: ‘Juan Manuel Cabrera <juanmanuelcabrera1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Manuel"),
                      family = "Cabrera",
                      role = c("aut", "cre"),
                      email = "juanmanuelcabrera1@gmail.com"),
               person(given = "Federico",
                      family = "Giri",
                      role = "aut"))
as necessary.
checkRd: (-1) ShapeDist.Rd:18: Lost braces; missing escapes or markup?
    18 | Procrustes distance provides a measure of coincidence of two point sets {xi} and {yi}, i=1..N. For this purpose the variance of point deviations is calculated at the optimal superposition of the sets. It allows to characterize the shape proximity of a given simplex to shape of a reference one.
       |                                                                         ^
checkRd: (-1) ShapeDist.Rd:18: Lost braces; missing escapes or markup?
    18 | Procrustes distance provides a measure of coincidence of two point sets {xi} and {yi}, i=1..N. For this purpose the variance of point deviations is calculated at the optimal superposition of the sets. It allows to characterize the shape proximity of a given simplex to shape of a reference one.
       |                                                                                  ^
Found the following HTML validation problems:
convert_time_dt_to_plot_dt.html:50:1 (convert_time_dt_to_plot_dt.Rd:12): Warning: missing </ul> before </div>
convert_time_dt_to_plot_num.html:50:1 (convert_time_dt_to_plot_num.Rd:12): Warning: missing </ul> before </div>
convert_time_num_to_chr.html:46:1 (convert_time_num_to_chr.Rd:10): Warning: missing </ul> before </div>
convert_time_num_to_period.html:46:1 (convert_time_num_to_period.Rd:10): Warning: missing </ul> before </div>
get_connection_model_params.html:46:1 (get_connection_model_params.Rd:10): Warning: missing </ul> before </div>
mutate_to_log.html:54:1 (mutate_to_log.Rd:14): Warning: missing </ul> before </div>
round_to_half.html:46:1 (round_to_half.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
california_ev_model.html:57:1 (california_ev_model.Rd:15): Warning: missing </ul> before </div>
convert_time_num_to_period.html:46:1 (convert_time_num_to_period.Rd:10): Warning: missing </ul> before </div>
round_to_interval.html:50:1 (round_to_interval.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Edoardo Vignotto <edoardo.vignotto@unige.ch>’

The Description field contains
  Vignotto, E., & Engelke, S. (2018) <arXiv:1808.09902>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Thomas Grubinger <ThomasGrubinger@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Meryam Krit <meryam.krit@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Meryam",
                    family = "Krit",
                    role = c("aut", "cre"),
                    email = "meryam.krit@gmail.com")
as necessary.
Maintainer: ‘Marcio A. Diniz <marcio.diniz@cshs.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Marcio", "A."),
                    family = "Diniz",
                    role = c("aut", "cre"),
                    email = "marcio.diniz@cshs.org")
as necessary.
checkRd: (-1) stop_rule.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) stop_rule.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) stop_rule.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) stop_rule.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
dlt_curve_d1classical.html:71:1 (dlt_curve_d1classical.Rd:25): Warning: missing </ul> before </div>
dlt_curve_d1extended.html:68:1 (dlt_curve_d1extended.Rd:24): Warning: missing </ul> before </div>
dlt_curve_d1ph.html:96:1 (dlt_curve_d1ph.Rd:44): Warning: missing </ul> before </div>
Maintainer: ‘Quentin Lajaunie <quentin_lajaunie@hotmail.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean-Baptiste",
                      family = "Hasse",
                      role = "aut"),
               person(given = "Quentin",
                      family = "Lajaunie",
                      role = c("aut", "cre"),
                      email = "quentin_lajaunie@hotmail.fr"))
as necessary.
Maintainer: ‘Guogen Shan <gshan@ufl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guogen",
                      family = "Shan",
                      role = c("aut", "cre"),
                      email = "gshan@ufl.edu"),
               person(given = "Weizhen",
                      family = "Wang",
                      role = "aut",
                      email = "weizhen.wang@wright.edu"))
as necessary.
Specified C++14: please drop specification unless essential
Maintainer: ‘Chris J. Lloyd <c.lloyd@mbs.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Chris", "J."),
                    family = "Lloyd",
                    role = c("aut", "cre"),
                    email = "c.lloyd@mbs.edu")
as necessary.
Found the following HTML validation problems:
AlphaIfDel.html:62:1 (AlphaIfDel.Rd:18): Warning: missing </ul> before </div>
LD_param_est.html:63:1 (LD_param_est.Rd:18): Warning: missing </ul> before </div>
PSD_item_params.html:58:1 (PSD_item_params.Rd:16): Warning: missing </ul> before </div>
asymprior.html:54:1 (asymprior.Rd:14): Warning: missing </ul> before </div>
generate_start_values.html:46:1 (generate_start_values.Rd:10): Warning: missing </ul> before </div>
grm_cumprob.html:54:1 (grm_cumprob.Rd:14): Warning: missing </ul> before </div>
objective_function_IRT.html:62:1 (objective_function_IRT.Rd:18): Warning: missing </ul> before </div>
params_to_target.html:50:1 (params_to_target.Rd:12): Warning: missing </ul> before </div>
slopeprior.html:58:1 (slopeprior.Rd:16): Warning: missing </ul> before </div>
softmax.html:46:1 (softmax.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Joshua French <joshua.french@ucdenver.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joshua",
                    family = "French",
                    role = c("aut", "cre"),
                    email = "joshua.french@ucdenver.edu")
as necessary.
Maintainer: ‘Jack Will <wujackwill@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jack",
                    family = "Will",
                    role = c("aut", "cre"),
                    email = "wujackwill@outlook.com")
as necessary.
Found the following HTML validation problems:
createCategorisedVar.html:56:1 (createCategorisedVar.Rd:15): Warning: missing </ul> before </div>
createSurvVar.html:62:1 (createSurvVar.Rd:19): Warning: missing </ul> before </div>
importCodes.html:51:1 (importCodes.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Nika Salia <2001salia@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Irakli",
                      family = "Salia",
                      role = "aut",
                      email = "irakli.salia854@gmail.com"),
               person(given = "Nika",
                      family = "Salia",
                      role = "cre",
                      email = "2001salia@gmail.com"))
as necessary.
Maintainer: ‘Marc-Daniel Mildenberger <mildenberger.stat@web.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marc-Daniel",
                    family = "Mildenberger",
                    role = c("aut", "cre"),
                    email = "mildenberger.stat@web.de")
as necessary.
Found the following HTML validation problems:
excess_stats.html:93:1 (excess_stats.Rd:39): Warning: missing </ul> before </div>
fit_ar.html:62:1 (fit_ar.Rd:18): Warning: missing </ul> before </div>
get_demographics.html:68:1 (get_demographics.Rd:24): Warning: missing </ul> before </div>
noleap_yday.html:46:1 (noleap_yday.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
keep_marked_column.html:56:1 (keep_marked_column.Rd:14): Warning: missing </ul> before </div>
mark_rows.html:59:1 (mark_rows.Rd:16): Warning: missing </ul> before </div>
print_data.html:51:1 (print_data.Rd:13): Warning: missing </ul> before </div>
print_exclusion.html:55:1 (print_exclusion.Rd:14): Warning: missing </ul> before </div>
validate_columns.html:51:1 (validate_columns.Rd:12): Warning: missing </ul> before </div>
File ‘excursions/libs/excursions.so’:
  Found ‘printf’, possibly from ‘printf’ (C)
    Object: ‘CAMD.a’
  Found ‘stdout’, possibly from ‘stdout’ (C)
    Object: ‘CAMD.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Found the following HTML validation problems:
summary.excurobj.html:63:1 (summary.excurobj.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Oliver Keyes <ironholds@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Oliver",
                      family = "Keyes",
                      role = c("aut", "cre"),
                      email = "ironholds@gmail.com"),
               person(given = "Penelope",
                      family = "Hopkins",
                      role = "ctb"),
               person(given = "Robyn",
                      family = "Temple-Wood",
                      role = "ctb"),
               person(given = "Mayank",
                      family = "Lahiri",
                      role = "cph"))
as necessary.

The Description field contains
  (https://github.com/mayanklahiri/easyexif) library.
Please enclose URLs in angle brackets (<...>).
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
dbAppendTable.html:54:1 (dbAppendTable.Rd:14): Warning: missing </ul> before </div>
dbInsertUpdateByRow.html:58:1 (dbInsertUpdateByRow.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Eric Batista Ferreira <eric.ferreira@unifal-mg.edu.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Eric", "Batista"),
                      family = "Ferreira",
                      role = c("aut", "cre"),
                      email = "eric.ferreira@unifal-mg.edu.br"),
               person(given = c("Portya", "Piscitelli"),
                      family = "Cavalcanti",
                      role = "aut"),
               person(given = c("Denismar", "Alves"),
                      family = "Nogueira",
                      role = "aut"))
as necessary.
checkRd: (-1) ccF.Rd:5: Escaped LaTeX specials: \&
checkRd: (-1) ccF.Rd:32: Escaped LaTeX specials: \&
checkRd: (-1) ccF.Rd:29: Escaped LaTeX specials: \&
checkRd: (-1) ccF.Rd:42: Lost braces
    42 | CALI\'{N}SKI, T.; CORSTEN, L. C. A. Clustering
       |       ^
Maintainer: ‘Eric Batista Ferreira <eric.ferreira@unifal-mg.edu.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Eric", "Batista"),
                      family = "Ferreira",
                      role = c("aut", "cre"),
                      email = "eric.ferreira@unifal-mg.edu.br"),
               person(given = c("Portya", "Piscitelli"),
                      family = "Cavalcanti",
                      role = "aut"),
               person(given = c("Denismar", "Alves"),
                      family = "Nogueira",
                      role = "aut"))
as necessary.
checkRd: (-1) ccF.Rd:41: Lost braces
    41 | CALI\'{N}SKI, T.; CORSTEN, L. C. A. Clustering
       |       ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compare_benchmark_event.R’ ‘compare_benchmark_time.R’
Maintainer: ‘Vincent Goulet <vincent.goulet@act.ulaval.ca>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:54:1 (inst/NEWS.Rd:22): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:120:1 (inst/NEWS.Rd:62): Warning: <h4> anchor "BUG-FIX" already defined
NEWS.html:148:1 (inst/NEWS.Rd:79): Warning: <h4> anchor "BUG-FIX" already defined
File ‘expint/libs/expint.so’:
  Found non-API call to R: ‘OBJECT’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
CA_var_plot.html:123:1 (CA_var_plot.Rd:57): Warning: missing </ul> before </div>
MCA_biplot.html:123:1 (MCA_biplot.Rd:57): Warning: missing </ul> before </div>
MCA_ind_plot.html:113:1 (MCA_ind_plot.Rd:51): Warning: missing </ul> before </div>
MCA_var_plot.html:118:1 (MCA_var_plot.Rd:54): Warning: missing </ul> before </div>
PCA_ind_plot.html:113:1 (PCA_ind_plot.Rd:51): Warning: missing </ul> before </div>
PCA_var_plot.html:113:1 (PCA_var_plot.Rd:51): Warning: missing </ul> before </div>
ggind.html:90:1 (ggind.Rd:36): Warning: missing </ul> before </div>
Maintainer: ‘Ben Powell <ben.powell@york.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ben",
                    family = "Powell",
                    role = c("aut", "cre"),
                    email = "ben.powell@york.ac.uk")
as necessary.
Maintainer: ‘Larisa Zamora-Matamoros <larisa@uo.edu.cu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Larisa",
                      family = "Zamora-Matamoros",
                      role = c("aut", "cre"),
                      email = "larisa@uo.edu.cu"),
               person(given = "Jorge",
                      family = "Diaz-Silvera",
                      role = "aut"))
as necessary.
Maintainer: ‘Rob J Hyndman <Rob.Hyndman@monash.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Rob", "J"),
                    family = "Hyndman",
                    role = c("aut", "cre"),
                    email = "Rob.Hyndman@monash.edu")
as necessary.

Found the following (possibly) invalid file URIs:
  URI: www.exponentialsmoothing.net
    From: man/expsmooth-package.Rd
  URI: www.exponentialsmoothing.net
    From: man/freight.Rd
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compute_fct_adjs.R’ ‘compute_fct_adjs.Rd’ ‘guess_measure_sets.R’
    ‘mutate_expecvar.R’ ‘mutate_expecvar.Rd’ ‘mutate_metrics.R’
    ‘mutate_metrics.Rd’ ‘summarise_measures.R’ ‘summarise_measures.Rd’
    ‘validators.R’
Maintainer: ‘Huixia Judy Wang <judywang@gwu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Huixia", "Judy"),
                    family = "Wang",
                    role = c("aut", "cre"),
                    email = "judywang@gwu.edu")
as necessary.
Found the following HTML validation problems:
WeatherLoach.html:54:1 (WeatherLoach.Rd:14): Warning: missing </ul> before </div>
plot.batchMarkOptim.html:51:1 (plot.batchMarkOptim.Rd:12): Warning: missing </ul> before </div>
plot.batchMarkUnmarkOptim.html:51:1 (plot.batchMarkUnmarkOptim.Rd:12): Warning: missing </ul> before </div>
print.batchMarkOptim.html:51:1 (print.batchMarkOptim.Rd:12): Warning: missing </ul> before </div>
print.batchMarkUnmarkOptim.html:51:1 (print.batchMarkUnmarkOptim.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Greg McMahan <gmcmacran@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Greg",
                    family = "McMahan",
                    role = c("aut", "cre"),
                    email = "gmcmacran@gmail.com")
as necessary.
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
Maintainer: ‘B N Mandal <mandal.stat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("B", "N"),
                      family = "Mandal",
                      role = c("aut", "cre"),
                      email = "mandal.stat@gmail.com"),
               person(given = "Jun",
                      family = "Ma",
                      role = "aut",
                      email = "jun.ma@mq.edu.au"))
as necessary.
Maintainer: ‘Han Li <hli@szu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Han",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "hli@szu.edu.cn"),
               person(given = "Minxuan",
                      family = "Xu",
                      role = "aut"),
               person(given = c("Jun", "S."),
                      family = "Liu",
                      role = "aut"),
               person(given = "Xiaodan",
                      family = "Fan",
                      role = "aut"))
as necessary.
Maintainer: ‘Subhadip Datta <subhadipdatta007@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Suhadip",
                      family = "Datta",
                      role = "aut"),
               person(given = "Subhadip",
                      family = "Datta",
                      role = "cre",
                      email = "subhadipdatta007@gmail.com"))
as necessary.
Maintainer: ‘Tymoteusz Wolodzko <twolodzko+extraDistr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tymoteusz",
                    family = "Wolodzko",
                    role = c("aut", "cre"),
                    email = "twolodzko+extradistr@gmail.com")
as necessary.
Found the following HTML validation problems:
Rademacher.html:48:1 (Rademacher.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ttf_import.html:54:1 (ttf_import.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Chester C. Deocaris <ccdeocaris@pup.edu.ph>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Chester", "C."),
                    family = "Deocaris",
                    role = c("aut", "cre"),
                    email = "ccdeocaris@pup.edu.ph")
as necessary.

The Description field contains
  paper of Molina (2019) <arXiv:1912.01783>, Seager (2013)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Francesco Bartolucci <francesco.bartolucci@unipg.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francesco",
                      family = "Bartolucci",
                      role = c("aut", "cre"),
                      email = "francesco.bartolucci@unipg.it"),
               person(given = "Antonio",
                      family = "Forcina",
                      role = "aut"))
as necessary.

The Description field contains
  association parameters; see Forcina (2019) <arXiv:1910.13848>. These
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) MatIn.Rd:6: Lost braces
     6 | Computation of aggregation matrices for generalized interactions that are used in code{\link{extRC}} to estimate extended RC models.
       |                                                                                       ^
checkRd: (-1) plot.Rd:5: Lost braces
     5 | \description{It plots the output of code{\link{extRC}} function for a vector of lambda values.}
       |                                         ^
checkRd: (-1) print.Rd:5: Lost braces
     5 | \description{Given the output of code{\link{extRC}} function, it is written in a readable form.}
       |                                      ^
checkRd: (-1) summary.Rd:5: Lost braces
     5 | \description{Summary method for the output of code{\link{extRC}} function.}
       |                                                   ^
Maintainer: ‘Marek Hlavac <mhlavac@alumni.princeton.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marek",
                    family = "Hlavac",
                    role = c("aut", "cre"),
                    email = "mhlavac@alumni.princeton.edu")
as necessary.
Maintainer: ‘Maxime Taillardat <maxime.taillardat@meteo.fr>’

The Description field contains
  index in Taillardat et al. (2019) <arXiv:1905.04022>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Nadezda Frolova <nfrolova@ualberta.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nadezda",
                      family = "Frolova",
                      role = c("aut", "cre"),
                      email = "nfrolova@ualberta.ca"),
               person(given = "Ivor",
                      family = "Cribben",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
scale_exuber_manual.html:83:1 (scale_exuber_manual.Rd:34): Warning: missing </ul> before </div>
tidy.ds_radf.html:51:1 (tidy.ds_radf.Rd:12): Warning: missing </ul> before </div>
tidy_join.html:56:1 (tidy_join.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Tjebo Heeren <tjebo@gmx.de>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘amd.Rd’:
    https://doi.org/10.5061/dryad.nvx0k6dqg
    https://doi.org/10.1001/jamaophthalmol.2020.5044
  File ‘amd2.Rd’:
    https://doi.org/10.5061/dryad.97r9289
    https://doi.org/10.1136/bmjopen-2018-027441
  File ‘amd3.Rd’:
    https://doi.org/10.5061/dryad.9cnp5hqfm
    https://doi.org/10.1136/bjophthalmol-2020-317161
  File ‘amdoct.Rd’:
    https://doi.org/10.1038/s41591-018-0107-6
    https://doi.org/10.1038/s41591-020-0867-7
    https://doi.org/10.5061/dryad.2rbnzs7m4
    https://doi.org/10.1016/j.ophtha.2020.09.025
  File ‘dme.Rd’:
    https://doi.org/10.5061/dryad.pzgmsbcfw
    https://doi.org/10.1038/s41433-020-1048-0
Maintainer: ‘Austin Hurst <ajhurst@uwaterloo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Barthelme",
                      role = "aut",
                      email = "simon.barthelme@gipsa-lab.fr"),
               person(given = "Austin",
                      family = "Hurst",
                      role = "cre",
                      email = "ajhurst@uwaterloo.ca"))
as necessary.
Found the following HTML validation problems:
parse_snellen.html:46:1 (parse_snellen.Rd:10): Warning: missing </ul> before </div>
checkRd: (-1) codePasses.Rd:64: Escaped LaTeX specials: \#
Found the following HTML validation problems:
log_message.html:62:1 (log_message.Rd:18): Warning: missing </ul> before </div>
logging.html:55:1 (logging.Rd:14): Warning: missing </ul> before </div>
plot_with_seed.html:95:1 (plot_with_seed.Rd:40): Warning: missing </ul> before </div>
Maintainer: ‘Timothy Koscik <timothy-koscik@uiowa.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Timothy", "R."),
                      family = "Koscik",
                      role = c("aut", "cre", "cph")),
               person(given = "Timothy",
                      family = "Koscik",
                      role = "cre",
                      email = "timothy-koscik@uiowa.edu"))
as necessary.
Found the following HTML validation problems:
checkIndex.html:50:1 (checkIndex.Rd:12): Warning: missing </ul> before </div>
fragilityRow.html:54:1 (fragilityRow.Rd:14): Warning: missing </ul> before </div>
ridgeR2.html:56:1 (ridgeR2.Rd:16): Warning: missing </ul> before </div>
checkRd: (-1) EEzGP_fit.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EEzGP_fit.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EEzGP_predict.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EEzGP_predict.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EzGP_fit.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EzGP_fit.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EzGP_predict.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EzGP_predict.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LEzGP_fit.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LEzGP_fit.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LLF_gradients.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LLF_gradients.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
ezmmek_calc_mm_fit.html:54:1 (ezmmek_calc_mm_fit.Rd:14): Warning: missing </ul> before </div>
ezmmek_calc_std_lm_buffer.html:46:1 (ezmmek_calc_std_lm_buffer.Rd:10): Warning: missing </ul> before </div>
ezmmek_calc_std_lm_homo.html:46:1 (ezmmek_calc_std_lm_homo.Rd:10): Warning: missing </ul> before </div>
ezmmek_calc_std_lm_homo_buffer.html:46:1 (ezmmek_calc_std_lm_homo_buffer.Rd:10): Warning: missing </ul> before </div>
ezmmek_calibrate_activities.html:54:1 (ezmmek_calibrate_activities.Rd:14): Warning: missing </ul> before </div>
ezmmek_std_lm.html:54:1 (ezmmek_std_lm.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ez_png.html:94:1 (ez_png.Rd:40): Warning: missing </ul> before </div>
ez_server.html:46:1 (ez_server.Rd:10): Warning: missing </ul> before </div>
ez_ui.html:46:1 (ez_ui.Rd:10): Warning: missing </ul> before </div>
get_incr.html:47:1 (get_incr.Rd:10): Warning: missing </ul> before </div>
quick_facet.html:55:1 (quick_facet.Rd:14): Warning: missing </ul> before </div>
save_png.html:70:1 (save_png.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Michael A. Lawrence <mike.lwrnc@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "A."),
                    family = "Lawrence",
                    role = c("aut", "cre"),
                    email = "mike.lwrnc@gmail.com")
as necessary.
checkRd: (-1) ez-package.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ez-package.Rd:33: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Jin Kim <jin.m.kim@yale.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jill Lundell <jflundell@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Peter Hoff <peter.hoff@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Peter",
                      family = "Hoff",
                      role = c("aut", "cre"),
                      email = "peter.hoff@duke.edu"),
               person(given = "Chaoyu",
                      family = "Yu",
                      role = "aut"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Peter Hoff <peter.hoff@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Hoff",
                    role = c("aut", "cre"),
                    email = "peter.hoff@duke.edu")
as necessary.

The Description field contains
  construction. See Hoff (2019) <arXiv:1907.12589> "Smaller p-values via
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Martin Ondrus <mondrus@ualberta.ca>’

The Description field contains
  (2021) <arXiv:2103.06347>. For a more detailed explanation and applied
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘GLARMA.R’ ‘GLARMA.Rd’ ‘INGARCH.R’ ‘INGARCH.Rd’ ‘fitted.GLARMA.Rd’
    ‘fitted.INGARCH.Rd’ ‘forecast.GLARMA.Rd’ ‘forecast.INGARCH.Rd’
    ‘glance.GLARMA.Rd’ ‘glance.INGARCH.Rd’ ‘residuals.GLARMA.Rd’
    ‘residuals.INGARCH.Rd’ ‘tidy.GLARMA.Rd’ ‘tidy.INGARCH.Rd’
Found the following HTML validation problems:
IRF.ARIMA.html:59:1 (IRF.ARIMA.Rd:16): Warning: missing </ul> before </div>
IRF.VAR.html:70:1 (IRF.VAR.Rd:20): Warning: missing </ul> before </div>
IRF.VECM.html:70:1 (IRF.VECM.Rd:20): Warning: missing </ul> before </div>
common_xregs.html:113:1 (common_xregs.Rd:51): Warning: missing </ul> before </div>
Maintainer: ‘Elizabeth Bersson <elizabeth.bersson@duke.edu>’

The Description field contains
  <arXiv:2204.08122> "Optimal Conformal Prediction for Small Areas".
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) fmCov.Rd:37: Lost braces; missing escapes or markup?
    37 | where, \code{alpha(i)} is the intercept, \code{f(t)} is a {K x 1} vector of 
       |                                                           ^
checkRd: (-1) plot.ffm.Rd:82: Lost braces; missing escapes or markup?
    82 | \item{las}{one of {0, 1, 2, 3} to set the direction of axis labels, same as
       |                   ^
checkRd: (-1) summary.ffm.Rd:39: Lost braces; missing escapes or markup?
    39 | Returned object is of class {summary.ffm}.
       |                             ^
Found the following HTML validation problems:
calcFLAM.html:76:1 (calcFLAM.Rd:30): Warning: missing </ul> before </div>
Maintainer: ‘Koulik Khamaru <koulik123@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Koulik",
                      family = "Khamaru",
                      role = c("aut", "cre"),
                      email = "koulik123@gmail.com"),
               person(given = "Rahul",
                      family = "Mazumder",
                      role = "aut",
                      email = "rahul.mazumder@gmail.com"))
as necessary.
Maintainer: ‘Campo Elias Pardo <cepardot@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Campo", "Elias"),
                      family = "Pardo",
                      role = c("aut", "cre"),
                      email = "cepardot@unal.edu.co"),
               person(given = c("Pedro", "Cesar", "del"),
                      family = "Campo",
                      role = "aut",
                      email = "pcdelcampon@unal.edu.co"),
               person(given = c("Camilo", "Jose"),
                      family = "Torres",
                      role = "aut",
                      email = "cjtorresj@unal.edu.co"),
               person(given = c("with", "the", "contributions", "from.", "Ivan"),
                      family = "Diaz",
                      role = "aut",
                      email = "ildiazm@unal.edu.co"),
               person(given = "Mauricio",
                      family = "Sadinle",
                      role = "aut",
                      email = "msadinleg@unal.edu.co"),
               person(given = "Jhonathan",
                      family = "Medina.",
                      role = "aut",
                      email = "jmedinau@unal.edu.co"))
as necessary.
checkRd: (-1) fviz_nbclust.Rd:75: Lost braces; missing escapes or markup?
    75 | (2001) proposed: "the smallest k such that gap(k) >= gap(k+1) - s_{k+1}". 
       |                                                                   ^
checkRd: (-1) fviz_nbclust.Rd:77: Lost braces; missing escapes or markup?
    77 | SE.factor*s_{k+1}" where SE.factor is a numeric value which can be 1
       |             ^
Maintainer: ‘Francois Husson <francois.husson@institut-agro.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Thuleau",
                      role = "aut"),
               person(given = "Francois",
                      family = "Husson",
                      role = c("aut", "cre"),
                      email = "francois.husson@institut-agro.fr"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Investigate.Rd: CA
  classif.Rd: HCPC
  description.Rd: CA
  factoGraph.Rd: CA
  graphHab.Rd: CA
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Dibaba Bayisa Gemechu <diboobayu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Dibaba", "Bayisa"),
                      family = "Gemechu",
                      role = c("aut", "cre"),
                      email = "diboobayu@gmail.com"),
               person(given = c("Legesse", "Kassa"),
                      family = "Debusho",
                      role = "aut"),
               person(given = "Linda",
                      family = "Haines",
                      role = "aut"))
as necessary.
Maintainer: ‘Aristidis K. Nikoloulopoulos <a.nikoloulopoulos@uea.ac.uk>’

The Description field contains
  (2022) <arXiv:2201.00339>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
create_data.html:56:1 (create_data.Rd:18): Warning: missing </ul> before </div>
rank_via_null.html:50:1 (rank_via_null.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
factorH_dataset.html:50:1 (factorH_dataset.Rd:25): Warning: missing </ul> before </div>
factorH_reference.html:358:1 (factorH_reference.Rd:248): Warning: missing </ul> before </div>
factorH_syntax.html:91:1 (factorH_syntax.Rd:61): Warning: missing </ul> before </div>
Maintainer: ‘Eric Leifer <Eric.Leifer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eric",
                      family = "Leifer",
                      role = c("aut", "cre"),
                      email = "eric.leifer@gmail.com"),
               person(given = "James",
                      family = "Troendle",
                      role = "aut"))
as necessary.
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    minor changes
Found the following HTML validation problems:
digested_is.html:46:1 (digested_is.Rd:10): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  SMART.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
ClustPredictor.html:172:1 (ClustPredictor.Rd:134): Warning: <h5> anchor "Usage" already defined
ClustPredictor.html:178:1 (ClustPredictor.Rd:138): Warning: <h5> anchor "Arguments" already defined
IDEA.html:212:1 (IDEA.Rd:163): Warning: <h5> anchor "Usage" already defined
IDEA.html:218:1 (IDEA.Rd:167): Warning: <h5> anchor "Arguments" already defined
IDEA.html:232:1 (IDEA.Rd:175): Warning: <h5> anchor "Returns" already defined
IDEA.html:250:1 (IDEA.Rd:185): Warning: <h5> anchor "Usage" already defined
IDEA.html:256:1 (IDEA.Rd:189): Warning: <h5> anchor "Arguments" already defined
IDEA.html:270:1 (IDEA.Rd:197): Warning: <h5> anchor "Returns" already defined
IDEA.html:288:1 (IDEA.Rd:207): Warning: <h5> anchor "Usage" already defined
IDEA.html:294:1 (IDEA.Rd:211): Warning: <h5> anchor "Arguments" already defined
SMART.html:221:1 (SMART.Rd:179): Warning: <h5> anchor "Usage" already defined
SMART.html:227:1 (SMART.Rd:183): Warning: <h5> anchor "Returns" already defined
SMART.html:247:1 (SMART.Rd:195): Warning: <h5> anchor "Usage" already defined
SMART.html:253:1 (SMART.Rd:199): Warning: <h5> anchor "Arguments" already defined
SMART.html:292:1 (SMART.Rd:229): Warning: <h5> anchor "Returns" already defined
SMART.html:309:1 (SMART.Rd:238): Warning: <h5> anchor "Usage" already defined
SMART.html:315:1 (SMART.Rd:242): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘David Causeur <david.causeur@agrocampus-ouest.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Emeline",
                      family = "Perthame",
                      role = "aut",
                      comment = "Institut Pasteur, Paris, France"),
               person(given = "Chloe",
                      family = "Friguet",
                      role = "aut",
                      comment = "Universite de Bretagne Sud, Vannes, France"),
               person(given = "David",
                      family = "Causeur",
                      role = c("aut", "cre"),
                      email = "david.causeur@agrocampus-ouest.fr",
                      comment = "Agrocampus\n    Ouest, Rennes, France"))
as necessary.
Maintainer: ‘Thomas Petzoldt <thomas.petzoldt@tu-dresden.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francois",
                      family = "Aucoin",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Petzoldt",
                      role = "cre",
                      email = "thomas.petzoldt@tu-dresden.de"))
as necessary.
checkRd: (-1) FADPclust.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FADPclust.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Kjetil B Halvorsen <kjetil1001@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("compiled", "by", "Kjetil", "B"),
                      family = "Halvorsen",
                      role = "aut"),
               person(given = c("Kjetil", "B"),
                      family = "Halvorsen",
                      role = "cre",
                      email = "kjetil1001@gmail.com"))
as necessary.
checkRd: (-1) happy.Rd:14: Lost braces
    14 |                  code{Pretty happy} <  \code{Very happy}}
       |                      ^
Maintainer: ‘Michel Lang <michellang@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michel",
                    family = "Lang",
                    role = c("aut", "cre"),
                    email = "michellang@gmail.com")
as necessary.
Found the following HTML validation problems:
visualizeGraph.html:51:1 (visualizeGraph.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Carlos Santos-Mangudo   <carlossantos.csm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carlos",
                    family = "Santos-Mangudo",
                    role = c("aut", "cre"),
                    email = "carlossantos.csm@gmail.com")
as necessary.
Maintainer: ‘Jakub Wiśniewski <jakwisn@gmail.com>’

The Description field contains
  <arXiv:2104.00507>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Error(s) in re-building vignettes:
  ...
--- re-building ‘Advanced_tutorial.Rmd’ using rmarkdown
--- finished re-building ‘Advanced_tutorial.Rmd’

--- re-building ‘Basic_tutorial.Rmd’ using rmarkdown

Quitting from Basic_tutorial.Rmd:254-257 [unnamed-chunk-19]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `rep()`:
! attempt to replicate an object of type 'object'
---
Backtrace:
    ▆
 1. ├─base::plot(fheatmap, text_size = 3)
 2. └─fairmodels:::plot.fairness_heatmap(fheatmap, text_size = 3)
 3.   └─base::ifelse(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Basic_tutorial.Rmd' failed with diagnostics:
attempt to replicate an object of type 'object'
--- failed re-building ‘Basic_tutorial.Rmd’

SUMMARY: processing the following file failed:
  ‘Basic_tutorial.Rmd’

Error: Vignette re-building failed.
Execution halted
Found the following significant warnings:
  Warning: replacing previous import ‘e1071::element’ by ‘ggplot2::element’ when loading ‘fairness’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fairness.Rcheck/00install.out’ for details.
Maintainer: ‘Joe Delaney <delaneyj@musc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joe",
                    family = "Delaney",
                    role = c("aut", "cre"),
                    email = "delaneyj@musc.edu")
as necessary.
Maintainer: ‘Barbara Bodinier <barbara.bodinier@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Barbara",
                    family = "Bodinier",
                    role = c("aut", "cre"),
                    email = "barbara.bodinier@gmail.com")
as necessary.

The Description field contains
  (B Bodinier et al (2021) <arXiv:2106.02521>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) fra_sf.Rd:22: Lost braces; missing escapes or markup?
    22 | A map of France as {sf} object. Can be used as dataset or for maps
       |                    ^
Maintainer: ‘Alfi Nurrahmah <221810140@stis.ac.id>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alfi",
                    family = "Nurrahmah",
                    role = c("aut", "cre"),
                    email = "221810140@stis.ac.id")
as necessary.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = c("Nancy", "R."),
                      family = "Zhang",
                      role = "aut"))
as necessary.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = c("Nancy", "R."),
                      family = "Zhang",
                      role = "aut"))
as necessary.
Maintainer: ‘Yun-Hee Choi <yun-hee.choi@schulich.uwo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yun-Hee",
                      family = "Choi",
                      role = c("aut", "cre"),
                      email = "yun-hee.choi@schulich.uwo.ca"),
               person(given = "Karen",
                      family = "Kopciuk",
                      role = "aut"),
               person(given = "Wenqing",
                      family = "He",
                      role = "aut"),
               person(given = "Laurent",
                      family = "Briollais",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
dot-check_class_level_plausibility.html:123:1 (dot-check_class_level_plausibility.Rd:60): Warning: missing </ul> before </div>
dot-check_feature_availability.html:51:1 (dot-check_feature_availability.Rd:12): Warning: missing </ul> before </div>
dot-check_input_identifier_column.html:119:1 (dot-check_input_identifier_column.Rd:58): Warning: missing </ul> before </div>
dot-check_input_plot_args.html:206:1 (dot-check_input_plot_args.Rd:114): Warning: missing </ul> before </div>
dot-check_outcome_type_plausibility.html:98:1 (dot-check_outcome_type_plausibility.Rd:41): Warning: missing </ul> before </div>
dot-check_survival_time_plausibility.html:95:1 (dot-check_survival_time_plausibility.Rd:42): Warning: missing </ul> before </div>
Maintainer: ‘Thomas Petzoldt <thomas.petzoldt@tu-dresden.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francois",
                      family = "Aucoin",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Petzoldt",
                      role = "cre",
                      email = "thomas.petzoldt@tu-dresden.de"))
as necessary.
Found the following HTML validation problems:
FAmle-internal.html:112:1 (FAmle-internal.Rd:49): Warning: missing </ul> before </div>
Maintainer: ‘David Causeur <David.Causeur@agrocampus-ouest.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Causeur",
                      role = c("aut", "cre"),
                      email = "david.causeur@agrocampus-ouest.fr"),
               person(given = "Chloe",
                      family = "Friguet",
                      role = "aut"),
               person(given = "Magalie",
                      family = "Houee-Bigot",
                      role = "aut"),
               person(given = "Maela",
                      family = "Kloareg",
                      role = "aut"))
as necessary.
checkRd: (-1) pi0FAMT.Rd:18: Lost braces
    18 | \code{pi0}{The estimated proportion \code{pi0} of null hypotheses.}}
       |           ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  as.FAMTdata.Rd: impute.knn
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Guy J. Abel <g.j.abel@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
'library' or 'require' calls not declared from:
  ‘RColorBrewer’ ‘colorspace’ ‘zoo’
File ‘fansi/libs/fansi.so’:
  Found non-API call to R: ‘R_nchar’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Ali Ahani <ali.ahani66@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ali",
                      family = "Ahani",
                      role = c("aut", "cre"),
                      email = "a_ahani@sbu.ac.ir",
                      comment = c(ORCID = "0000-0002-1441-0444")),
               person(given = c("S.", "Saeid", "Mousavi"),
                      family = "Nadoushani",
                      role = "aut",
                      email = "sa_mousavi@sbu.ac.ir",
                      comment = c(ORCID = "0000-0001-6679-5553")))
as necessary.
Maintainer: ‘Paul Rougieux <paul.rougieux@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Michael", "C."),
                      family = "J.",
                      role = "aut"),
               person(given = "Markus",
                      family = "Gesmann",
                      role = "aut"),
               person(given = "Filippo",
                      family = "Gheri",
                      role = "aut"),
               person(given = "Paul",
                      family = "Rougieux",
                      role = c("aut", "cre"),
                      email = "paul.rougieux@gmail.com"),
               person(given = "Sebastian",
                      family = "Campbell",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
cache.html:58:1 (cache.Rd:16): Warning: missing </ul> before </div>
change_case.html:72:1 (change_case.Rd:23): Warning: missing </ul> before </div>
ebind.html:60:1 (ebind.Rd:17): Warning: missing </ul> before </div>
fillCountryCode.html:56:1 (fillCountryCode.Rd:15): Warning: missing </ul> before </div>
get_fao.html:63:1 (get_fao.Rd:21): Warning: missing </ul> before </div>
overlap.html:68:1 (overlap.Rd:21): Warning: missing </ul> before </div>
read_dataset_dimension.html:55:1 (read_dataset_dimension.Rd:16): Warning: missing </ul> before </div>
translate_countrycodes.html:79:1 (translate_countrycodes.Rd:34): Warning: missing </ul> before </div>
Found the following HTML validation problems:
faq-shiny.html:70:1 (faq-shiny.Rd:25): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FarmTest.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mohamed", "El", "Fodil"),
                    family = "Ihaddaden",
                    role = c("aut", "cre"),
                    email = "ihaddaden.fodeil@gmail.com")
as necessary.
Found the following HTML validation problems:
plot.fars_density.html:55:1 (plot.fars_density.Rd:14): Warning: missing </ul> before </div>
plot.fars_scenario.html:55:1 (plot.fars_scenario.Rd:14): Warning: missing </ul> before </div>
plot_factors.mldfm.html:62:1 (plot_factors.mldfm.Rd:18): Warning: missing </ul> before </div>
plot_loadings.mldfm.html:58:1 (plot_loadings.mldfm.Rd:16): Warning: missing </ul> before </div>
plot_residuals.mldfm.html:54:1 (plot_residuals.mldfm.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Emilie Lebarbier <emilie.lebarbier@agroparistech.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xavier",
                      family = "Collilieux",
                      role = "aut"),
               person(given = "Emilie",
                      family = "Lebarbier",
                      role = c("aut", "cre"),
                      email = "emilie.lebarbier@agroparistech.fr"),
               person(given = "Stephane",
                      family = "Robin",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:1505.05660>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘FASeg-package.Rd’:
    \keyword{Dynamic programming; EM algorithm; Factor [TRUNCATED]
Maintainer: ‘Peter W. MacDonald <pwmacdon@umich.edu>’

The Description field contains
  Zhu and Levina (2022+) <arXiv:2210.07491>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Jonas Striaukas <jonas.striaukas@gmail.com>’

The Description field contains
  Striaukas (2023) <arXiv:2307.13364>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yijian Huang <yhuang5@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yijian",
                    family = "Huang",
                    role = c("aut", "cre"),
                    email = "yhuang5@emory.edu")
as necessary.
Found the following HTML validation problems:
AdaptiveAvgPool.html:50:1 (AdaptiveAvgPool.Rd:12): Warning: missing </ul> before </div>
AddChannels.html:46:1 (AddChannels.Rd:10): Warning: missing </ul> before </div>
Flatten.html:46:1 (Flatten.Rd:10): Warning: missing </ul> before </div>
GANDiscriminativeLR.html:46:1 (GANDiscriminativeLR.Rd:10): Warning: missing </ul> before </div>
ImageDataLoaders_from_folder.html:113:1 (ImageDataLoaders_from_folder.Rd:51): Warning: missing </ul> before </div>
L.html:46:1 (L.Rd:10): Warning: missing </ul> before </div>
ResNet.html:83:1 (ResNet.Rd:33): Warning: missing </ul> before </div>
TfmdLists.html:46:1 (TfmdLists.Rd:10): Warning: missing </ul> before </div>
XResNet.html:66:1 (XResNet.Rd:20): Warning: missing </ul> before </div>
combined_flat_anneal.html:60:1 (combined_flat_anneal.Rd:16): Warning: missing </ul> before </div>
discriminator.html:68:1 (discriminator.Rd:24): Warning: missing </ul> before </div>
icevision_IAACropAndPad.html:78:1 (icevision_IAACropAndPad.Rd:30): Warning: missing </ul> before </div>
mask_from_blur.html:62:1 (mask_from_blur.Rd:18): Warning: missing </ul> before </div>
show_image.html:113:1 (show_image.Rd:51): Warning: missing </ul> before </div>
sort.html:55:1 (sort.Rd:15): Warning: missing </ul> before </div>
to_matrix.html:50:1 (to_matrix.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Eric C. Chi <ecchi1105@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  Studer, and Baraniuk (2016) <arXiv:1411.3406>. Schemes such as Fast
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Aaron Molstad <molst029@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "Molstad",
                    role = c("aut", "cre"),
                    email = "molst029@umn.edu")
as necessary.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:457:1 (inst/NEWS.Rd:271): Warning: missing </ul> before </div>
NEWS.html:130:1 (inst/NEWS.Rd:74): Warning: <h4> anchor "New-Features" already defined
NEWS.html:147:1 (inst/NEWS.Rd:83): Warning: <h4> anchor "New-Features" already defined
NEWS.html:171:1 (inst/NEWS.Rd:98): Warning: <h4> anchor "Significant-User-Visible-Changes" already defined
NEWS.html:190:1 (inst/NEWS.Rd:110): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:212:1 (inst/NEWS.Rd:124): Warning: <h4> anchor "New-Features" already defined
NEWS.html:255:1 (inst/NEWS.Rd:150): Warning: <h4> anchor "Significant-User-Visible-Changes" already defined
NEWS.html:287:1 (inst/NEWS.Rd:172): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:305:1 (inst/NEWS.Rd:183): Warning: <h4> anchor "New-Features" already defined
NEWS.html:319:1 (inst/NEWS.Rd:191): Warning: <h4> anchor "Installation" already defined
NEWS.html:337:1 (inst/NEWS.Rd:201): Warning: <h4> anchor "Significant-User-Visible-Changes" already defined
NEWS.html:379:1 (inst/NEWS.Rd:231): Warning: <h4> anchor "New-Features" already defined
NEWS.html:392:1 (inst/NEWS.Rd:238): Warning: <h4> anchor "Installation" already defined
NEWS.html:410:1 (inst/NEWS.Rd:248): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:422:1 (inst/NEWS.Rd:254): Warning: <h4> anchor "New-Features" already defined
NEWS.html:438:1 (inst/NEWS.Rd:263): Warning: <h4> anchor "Installation" already defined
Found the following HTML validation problems:
get_window.html:54:1 (get_window.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Dean Bodenham <deanbodenhambsse@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Felipe", "Llinares"),
                      family = "Lopez",
                      role = "aut"),
               person(given = "Dean",
                      family = "Bodenham",
                      role = c("aut", "cre"),
                      email = "deanbodenhambsse@gmail.com"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
kkk.html:52:1 (kkk.Rd:12): Warning: missing </ul> before </div>
loglikcub00.html:59:1 (loglikcub00.Rd:16): Warning: missing </ul> before </div>
loglikcub0q.html:64:1 (loglikcub0q.Rd:19): Warning: missing </ul> before </div>
loglikcubp0.html:64:1 (loglikcubp0.Rd:19): Warning: missing </ul> before </div>
loglikcubpq.html:69:1 (loglikcubpq.Rd:22): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fasterElasticNet.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
dot-maxVal.html:46:1 (dot-maxVal.Rd:10): Warning: missing </ul> before </div>
dot-minVal.html:46:1 (dot-minVal.Rd:10): Warning: missing </ul> before </div>
dot-nlevels.html:46:1 (dot-nlevels.Rd:10): Warning: missing </ul> before </div>
dot-plot.html:50:1 (dot-plot.Rd:12): Warning: missing </ul> before </div>
dot-zonal.html:66:1 (dot-zonal.Rd:20): Warning: missing </ul> before </div>
dot-zonalByVector.html:58:1 (dot-zonalByVector.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
pspline_setting.html:75:1 (pspline_setting.Rd:27): Warning: missing </ul> before </div>
select_knots.html:61:1 (select_knots.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Alexander W Blocker <ablocker@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Alexander", "W"),
                    family = "Blocker",
                    role = c("aut", "cre"),
                    email = "ablocker@gmail.com")
as necessary.
Found the following HTML validation problems:
fastglcm.html:47:1 (fastglcm.Rd:113): Warning: <h3> anchor "Methods" already defined
fastglcm.html:93:1 (fastglcm.Rd:136): Warning: <h5> anchor "Usage" already defined
fastglcm.html:155:1 (fastglcm.Rd:182): Warning: <h5> anchor "Usage" already defined
fastglcm.html:161:1 (fastglcm.Rd:186): Warning: <h5> anchor "Arguments" already defined
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
extract-methods.html:56:1 (extract-methods.Rd:16): Warning: missing </ul> before </div>
predict.fastglm.html:81:1 (predict.fastglm.Rd:34): Warning: missing </ul> before </div>
print.html:51:1 (print.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Giri Gopalan <gopalan88@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giri",
                      family = "Gopalan",
                      role = c("aut", "cre"),
                      email = "gopalan88@gmail.com"),
               person(given = "Luke",
                      family = "Bornn",
                      role = "aut"))
as necessary.
Maintainer: ‘Steven T. Garren <garrenst@jmu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Steven", "T."),
                    family = "Garren",
                    role = c("aut", "cre"),
                    email = "garrenst@jmu.edu")
as necessary.
Maintainer: ‘Stephen R. Haptonstahl <srh@haptonstahl.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Stephen", "R."),
                    family = "Haptonstahl",
                    role = c("aut", "cre"),
                    email = "srh@haptonstahl.org")
as necessary.
Maintainer: ‘Xun Li <lixun910@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xun",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "lixun910@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Gaston Besanson <besanson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gaston",
                    family = "Besanson",
                    role = c("aut", "cre"),
                    email = "besanson@gmail.com")
as necessary.
Found the following HTML validation problems:
aggregateEM.html:53:1 (aggregateEM.Rd:15): Warning: missing </ul> before </div>
plot.fastLink.html:57:1 (plot.fastLink.Rd:15): Warning: missing </ul> before </div>
print.inspectEM.html:51:1 (print.inspectEM.Rd:12): Warning: missing </ul> before </div>
summary.fastLink.html:71:1 (summary.fastLink.Rd:23): Warning: missing </ul> before </div>
checkRd: (-1) eigen_compute_single_entry_of_diagonal_matrix.Rd:17: Lost braces; missing escapes or markup?
    17 | The value of m^{-1}_{j,j}
       |                ^
checkRd: (-1) eigen_compute_single_entry_of_diagonal_matrix.Rd:17: Lost braces; missing escapes or markup?
    17 | The value of m^{-1}_{j,j}
       |                     ^
Maintainer: ‘Mathieu Steijn <m.p.a.steijn@uu.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mathieu",
                    family = "Steijn",
                    role = c("aut", "cre"),
                    email = "m.p.a.steijn@uu.nl")
as necessary.
Found the following HTML validation problems:
key_missing.html:48:1 (key_missing.Rd:13): Warning: missing </ul> before </div>
Maintainer field differs from that derived from Authors@R
  Maintainer: ‘Simon Urbanek <simon.urbanek@r-project.org>’
  Authors@R:  ‘Simon Urbanek <Simon.Urbanek@r-project.org>’
File ‘fastmatch/libs/fastmatch.so’:
  Found non-API calls to R: ‘DATAPTR’, ‘EXTPTR_PTR’, ‘NAMED’, ‘OBJECT’,
    ‘SETLENGTH’, ‘SET_NAMED’, ‘STRING_PTR’, ‘VECTOR_PTR’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Martin Skogholt <m.skogholt@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Martin",
                    family = "Skogholt",
                    role = c("aut", "cre"),
                    email = "m.skogholt@gmail.com")
as necessary.
Found the following HTML validation problems:
updateFNB.html:80:1 (updateFNB.Rd:36): Warning: missing </ul> before </div>
Maintainer: ‘Georg Hahn <ghahn@hsph.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Georg",
                    family = "Hahn",
                    role = c("aut", "cre"),
                    email = "ghahn@hsph.harvard.edu")
as necessary.
Found the following HTML validation problems:
f_mutate.html:133:1 (f_mutate.Rd:85): Warning: missing </ul> before </div>
f_reframe.html:122:1 (f_reframe.Rd:76): Warning: missing </ul> before </div>
list_tidy.html:57:1 (list_tidy.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
fastqc_install.html:52:1 (fastqc_install.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
information.html:50:1 (information.Rd:12): Warning: missing </ul> before </div>
maxLik2.html:55:1 (maxLik2.Rd:14): Warning: missing </ul> before </div>
plot.maxLik2.html:67:1 (plot.maxLik2.Rd:21): Warning: missing </ul> before </div>
checkRd: (-1) update_nhl_db.Rd:51-53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) update_nhl_db.Rd:54-57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) update_phf_db.Rd:51-53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) update_phf_db.Rd:54-57: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Stefan Kloessner <S.Kloessner@mx.uni-saarland.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Lampros Mouselimis <mouselimislampros@gmail.com>’

The Description field contains
  Matthijs Douze, Herve Jegou, Tomas Mikolov, 2016, <arXiv:1612.03651>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Simon Urbanek <simon.urbanek@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Urbanek",
                    role = c("aut", "cre"),
                    email = "simon.urbanek@r-project.org")
as necessary.
Found the following HTML validation problems:
internal.html:82:1 (internal.Rd:30): Warning: missing </ul> before </div>
penalty_scaler.html:62:1 (penalty_scaler.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Dominic Grün <dominic.gruen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dominic",
                    family = "Grün",
                    role = c("aut", "cre"),
                    email = "dominic.gruen@gmail.com")
as necessary.
checkRd: (-1) Error-Classes.Rd:107-119: Lost braces
   107 |   \item \code{do_verbose(response, template)} {
       |                                               ^
checkRd: (-1) Error.Rd:33-45: Lost braces
    33 |   \item \code{do(response, mssg)} {
       |                                   ^
Found the following HTML validation problems:
xue_microbiome_sample.html:61:1 (xue_microbiome_sample.Rd:17): Warning: missing </ul> before </div>
xue_species_info.html:57:1 (xue_species_info.Rd:16): Warning: missing </ul> before </div>
xue_species_similarity.html:51:1 (xue_species_similarity.Rd:11): Warning: missing </ul> before </div>
xue_species_tree.html:47:1 (xue_species_tree.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Oliver Keyes <ironholds@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Oliver",
                      family = "Keyes",
                      role = c("aut", "cre"),
                      email = "ironholds@gmail.com"),
               person(given = "Alex",
                      family = "Bellos",
                      role = "cph"))
as necessary.

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md

The Description field contains
  (http://pages.bloomsbury.com/favouritenumber).
Please enclose URLs in angle brackets (<...>).
Maintainer: ‘Davide Altomare <davide.altomare@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Davide",
                      family = "Altomare",
                      role = c("aut", "cre"),
                      email = "davide.altomare@gmail.com"),
               person(given = "Guido",
                      family = "Consonni",
                      role = "aut"),
               person(given = "Luca",
                      family = "La Rocca",
                      role = "aut"))
as necessary.
Maintainer: ‘Luca Agnelli  <luca.agnelli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adrian",
                      family = "Andronache",
                      role = "aut",
                      email = "adi.andronache@gmail.com"),
               person(given = "Luca",
                      family = "Agnelli",
                      role = c("aut", "cre"),
                      email = "luca.agnelli@gmail.com"))
as necessary.
checkRd: (-1) FBN.histogramMaxima.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.histogramMaxima.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.histogramMaxima.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.histogramMaxima.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.kmeans.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.kmeans.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.kmeans.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBN.kmeans.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FBNormalization.Rd:40: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Tobias Setz <tobias.setz@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Diethelm",
                      family = "Wuertz",
                      role = "aut"),
               person(given = "Tobias",
                      family = "Setz",
                      role = "cre",
                      email = "tobias.setz@live.com"))
as necessary.
checkRd: (-1) fbad_copy_ad.Rd:25: Lost braces; missing escapes or markup?
    25 | \item{status_option}{(string) enum {ACTIVE, PAUSED, INHERITED_FROM_SOURCE}}
       |                                    ^
checkRd: (-1) fbad_copy_ad.Rd:27: Lost braces; missing escapes or markup?
    27 | \item{rename_strategy}{(string) enum {DEEP_RENAME, ONLY_TOP_LEVEL_RENAME, NO_RENAME}}
       |                                      ^
checkRd: (-1) fbad_copy_adset.Rd:34: Lost braces; missing escapes or markup?
    34 | \item{status_option}{(string) enum {ACTIVE, PAUSED, INHERITED_FROM_SOURCE}}
       |                                    ^
checkRd: (-1) fbad_copy_adset.Rd:36: Lost braces; missing escapes or markup?
    36 | \item{rename_strategy}{(string) enum {DEEP_RENAME, ONLY_TOP_LEVEL_RENAME, NO_RENAME}}
       |                                      ^
checkRd: (-1) fbad_copy_campaign.Rd:31: Lost braces; missing escapes or markup?
    31 | \item{status_option}{(string) enum {ACTIVE, PAUSED, INHERITED_FROM_SOURCE}}
       |                                    ^
checkRd: (-1) fbad_copy_campaign.Rd:33: Lost braces; missing escapes or markup?
    33 | \item{rename_strategy}{(string) enum {DEEP_RENAME, ONLY_TOP_LEVEL_RENAME, NO_RENAME}}
       |                                      ^
Found the following HTML validation problems:
fbad_assign_users_to_account.html:63:1 (fbad_assign_users_to_account.Rd:21): Warning: missing </ul> before </div>
fbad_get_adaccounts.html:62:1 (fbad_get_adaccounts.Rd:18): Warning: missing </ul> before </div>
fbad_get_client_ad_accounts.html:68:1 (fbad_get_client_ad_accounts.Rd:24): Warning: missing </ul> before </div>
fbad_get_client_pages.html:62:1 (fbad_get_client_pages.Rd:18): Warning: missing </ul> before </div>
fbad_get_owned_pages.html:62:1 (fbad_get_owned_pages.Rd:18): Warning: missing </ul> before </div>
fbad_request_next_page.html:46:1 (fbad_request_next_page.Rd:10): Warning: missing </ul> before </div>
is.FB_Ad_Account.html:46:1 (is.FB_Ad_Account.Rd:10): Warning: missing </ul> before </div>
print.FB_Ad_Account.html:51:1 (print.FB_Ad_Account.Rd:12): Warning: missing </ul> before </div>
checkRd: (-1) plot.fbroc.conf.Rd:5: Lost braces
     5 | \title{Plots function for object of class{fbroc.conf}}
       |                                          ^
Maintainer: ‘Riko Kelter <riko_k@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Riko",
                    family = "Kelter",
                    role = c("aut", "cre"),
                    email = "riko_k@gmx.de")
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
SPYUS500.html:48:1 (SPYUS500.Rd:11): Warning: missing </ul> before </div>
cancer.html:48:1 (cancer.Rd:11): Warning: missing </ul> before </div>
rates.html:48:1 (rates.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Shaun Turney <shaun.turney@mail.mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shaun",
                      family = "Turney",
                      role = c("aut", "cre"),
                      email = "shaun.turney@mail.mcgill.ca"),
               person(given = "Michael",
                      family = "Bachhofer",
                      role = "aut"))
as necessary.
Running examples in ‘FCMapper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graph.fcm
> ### Title: Fuzzy cognitive map graph
> ### Aliases: graph.fcm
> 
> ### ** Examples
> 
> 
> matrix = matrix(nrow=7,ncol=7)
> matrix[1,] = c(0,-0.5,0,0,1,0,1)
> matrix[2,] = c(1,0,1,0.2,0,0,0.6)
> matrix[3,] = c(0,1,0,0,0,0,0)
> matrix[4,] = c(0.6,0,0,1,0,0,0.1)
> matrix[5,] = c(0,0.5,0,0,1,0,-0.6) 
> matrix[6,] = c(0,0,-1,0,0,0,0)
> matrix[7,] = c(0,0,0,-0.5,0,0,1)
> concept.names = c("A","B","C","D","E","F","G")
> 
> results = nochanges.scenario(matrix,iter=25,concept.names)
> 
> graph.fcm(matrix,concept.sizes=results$Equilibrium_value,concept.names)
Warning: Non-positive edge weight found, ignoring all weights during graph layout.
Warning in rep(no, length.out = len) :
  'x' is NULL so the result will be NULL
Error in ans[npos] <- rep(no, length.out = len)[npos] : 
  replacement has length zero
Calls: graph.fcm ... .tkplot.update.vertex -> .tkplot.update.edge -> ifelse
Execution halted
Maintainer: ‘Zoumpoulia Dikopoulou <dikopoulia@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Zoumpoulia", "Dikopoulou"),
                      family = "<zoumpolia.dikopoulou@uhasselt.be>",
                      role = "aut",
                      email = "zoumpolia.dikopoulou@uhasselt.be"),
               person(given = "Elpiniki",
                      family = "Papageorgiou",
                      role = "aut",
                      email = "epapageorgiou@teiste.gr"),
               person(role = "aut",
                      email = "e.i.papageorgiou75@gmail.com"),
               person(given = "Zoumpoulia",
                      family = "Dikopoulou",
                      role = "cre",
                      email = "dikopoulia@gmail.com"))
as necessary.
Maintainer: ‘Paul Smith <paul@waternumbers.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Diethelm",
                      family = "Wuertz",
                      role = "aut"),
               person(given = "Tobias",
                      family = "Setz",
                      role = "aut"),
               person(given = "Yohan",
                      family = "Chalabi",
                      role = "ctb"),
               person(given = "Paul",
                      family = "Smith",
                      role = "cre",
                      email = "paul@waternumbers.co.uk"))
as necessary.
Maintainer: ‘Doulaye Dembele <doulaye@igbmc.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Doulaye",
                    family = "Dembele",
                    role = c("aut", "cre"),
                    email = "doulaye@igbmc.fr")
as necessary.
Found the following files/directories:
  ‘test2delete.txt’ ‘test2delete2_values.txt’ ‘test2delete_values.txt’
Maintainer: ‘Vincent Guyader <vincent@thinkr.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vincent",
                    family = "Guyader",
                    role = c("aut", "cre"),
                    email = "vincent@thinkr.fr")
as necessary.
Found the following files/directories:
  ‘.Rprofile’
Maintainer: ‘Lealand Morin <lealand.morin@ucf.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Guillermo Mestre Marcos <guillermo.mestre@comillas.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘FTS_identification.Rd’:
    https://doi.org/10.1016/j.csda.2020.107108
    https://doi.org/10.1016/j.ijepes.2020.106083
    https://doi.org/10.1016/j.jmva.2017.08.004
  File ‘fit_ARHp_FPCA.Rd’:
    https://doi.org/10.1080/01621459.2014.909317
  File ‘obtain_FACF.Rd’:
    https://doi.org/10.1016/j.csda.2020.107108
    https://doi.org/10.1016/j.ijepes.2020.106083
    https://doi.org/10.1016/j.jmva.2017.08.004
  File ‘obtain_FPACF.Rd’:
    https://doi.org/10.1016/j.csda.2020.107108
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘caps-plot.R’ ‘utils.R’
Maintainer: ‘Lukasz Smaga <ls@amu.edu.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tomasz",
                      family = "Gorecki",
                      role = "aut"),
               person(given = "Lukasz",
                      family = "Smaga",
                      role = c("aut", "cre"),
                      email = "ls@amu.edu.pl"))
as necessary.
checkRd: (-1) simulation_model9.Rd:47: Lost braces; missing escapes or markup?
    47 | \item{ci}{A vector of 2 values containing $c_{1i}$ and $c_{2i}$ in the contamination
       |                                              ^
checkRd: (-1) simulation_model9.Rd:47: Lost braces; missing escapes or markup?
    47 | \item{ci}{A vector of 2 values containing $c_{1i}$ and $c_{2i}$ in the contamination
       |                                                           ^
Found the following HTML validation problems:
plot_dtt.html:100:1 (plot_dtt.Rd:45): Warning: missing </ul> before </div>
Found the following HTML validation problems:
CheckData.html:50:1 (CheckData.Rd:12): Warning: missing </ul> before </div>
CheckOptions.html:54:1 (CheckOptions.Rd:14): Warning: missing </ul> before </div>
ConvertSupport.html:74:1 (ConvertSupport.Rd:27): Warning: missing </ul> before </div>
SetOptions.html:56:1 (SetOptions.Rd:16): Warning: missing </ul> before </div>
cumtrapzRcpp.html:50:1 (cumtrapzRcpp.Rd:12): Warning: missing </ul> before </div>
print.FSVD.html:51:1 (print.FSVD.Rd:12): Warning: missing </ul> before </div>
print.WFDA.html:51:1 (print.WFDA.Rd:12): Warning: missing </ul> before </div>
str.FPCA.html:51:1 (str.FPCA.Rd:12): Warning: missing </ul> before </div>
trapzRcpp.html:50:1 (trapzRcpp.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
run_app.html:46:1 (run_app.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
beta.html:49:1 (beta.Rd:13): Warning: missing </ul> before </div>
f_plot.html:52:1 (f_plot.Rd:14): Warning: missing </ul> before </div>
growth_vel.html:58:1 (growth_vel.Rd:17): Warning: missing </ul> before </div>
im.html:56:1 (im.Rd:15): Warning: missing </ul> before </div>
simu_data.html:66:1 (simu_data.Rd:17): Warning: missing </ul> before </div>
simu_warp.html:56:1 (simu_warp.Rd:12): Warning: missing </ul> before </div>
simu_warp_median.html:56:1 (simu_warp_median.Rd:12): Warning: missing </ul> before </div>
toy_data.html:61:1 (toy_data.Rd:17): Warning: missing </ul> before </div>
toy_warp.html:51:1 (toy_warp.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Alessia Pini <alessia.pini@polimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessia",
                      family = "Pini",
                      role = c("aut", "cre"),
                      email = "alessia.pini@polimi.it"),
               person(given = "Simone",
                      family = "Vantini",
                      role = "aut"))
as necessary.
checkRd: (-1) NASAtemp.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) NASAtemp.Rd:15: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
getTaxonomy.html:47:1 (getTaxonomy.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Etienne Laliberté <etiennelaliberte@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Etienne",
                      family = "Laliberté",
                      role = c("aut", "cre"),
                      email = "etiennelaliberte@gmail.com"),
               person(given = "Pierre",
                      family = "Legendre",
                      role = "aut"),
               person(given = "Bill",
                      family = "Shipley",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following files/directories:
  ‘vert.txt’
Maintainer: ‘Joshua Millstein <joshua.millstein@usc.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Xiongzhi Chen <xiongzhi.chen@wsu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiongzhi",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "xiongzhi.chen@wsu.edu"),
               person(given = c("Rebecca", "W."),
                      family = "Doerge",
                      role = "aut",
                      email = "rwdoerge@andrew.cmu.edu"))
as necessary.
checkRd: (-1) p.fdr.Rd:30: Lost braces
    30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
       |                                                                                                                                                                     ^
Maintainer: ‘Stan Pounds <stanley.pounds@stjude.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stan",
                    family = "Pounds",
                    role = c("aut", "cre"),
                    email = "stanley.pounds@stjude.org")
as necessary.
Maintainer: ‘Han Lin Shang <hanlin.shang@anu.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Han", "Lin"),
                      family = "Shang",
                      role = c("aut", "cre"),
                      email = "hanlin.shang@anu.edu.au"),
               person(given = c("Rob", "J"),
                      family = "Hyndman",
                      role = "aut"))
as necessary.
Maintainer: ‘Valentina Masarotto <v.masarotto@math.leidenuniv.nl>’

The Description field contains
  in Masarotto, Panaretos & Zemel (2022) <arXiv:2212.04797>.  - perform a
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Habil Zare <zare@u.washington.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Habil",
                    family = "Zare",
                    role = c("aut", "cre"),
                    email = "zare@u.washington.edu")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Henna D. Bhramdat <bhramdath@ufl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Henna", "D."),
                    family = "Bhramdat",
                    role = c("aut", "cre"),
                    email = "bhramdath@ufl.edu")
as necessary.
Specified C++11: please drop specification unless essential
File ‘feather/libs/feather.so’:
  Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++)
    Object: ‘libfeather.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Found the following HTML validation problems:
feather_example.html:50:1 (feather_example.Rd:13): Warning: missing </ul> before </div>
checkRd: (-1) mutlicol_terminator.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mutlicol_terminator.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mutlicol_terminator.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mutlicol_terminator.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) rfeTerminator.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) rfeTerminator.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) rfeTerminator.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) rfeTerminator.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Ali Uenlue <ali.uenlue@tum.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) morse.Rd:40: Escaped LaTeX specials: \#
checkRd: (-1) noRegMin.Rd:23: Escaped LaTeX specials: \#
checkRd: (-1) noRegMin.Rd:24: Escaped LaTeX specials: \#
checkRd: (-1) regMin.Rd:24: Escaped LaTeX specials: \#
Maintainer: ‘Thomas J. Leeper <thosjleeper@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Thomas", "J."),
                    family = "Leeper",
                    role = c("aut", "cre"),
                    email = "thosjleeper@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘add.R’ ‘comments.R’ ‘create.R’ ‘delete.R’ ‘finish_upload.R’ ‘map.R’
    ‘map_elements.R’ ‘proc.R’ ‘style.R’ ‘user.R’
Maintainer: ‘Thuan Nguyen <nguythua@ohsu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiming",
                      family = "Jiang",
                      role = "aut"),
               person(given = "Jianyang",
                      family = "Zhao",
                      role = "aut"),
               person(given = c("J.", "Sunil"),
                      family = "Rao",
                      role = "aut"),
               person(given = "Thuan",
                      family = "Nguyen",
                      role = c("aut", "cre"),
                      email = "nguythua@ohsu.edu"))
as necessary.
Found the following HTML validation problems:
plot.AF.html:51:1 (plot.AF.Rd:12): Warning: missing </ul> before </div>
plot.NF.html:51:1 (plot.NF.Rd:12): Warning: missing </ul> before </div>
summary.AF.html:51:1 (summary.AF.Rd:12): Warning: missing </ul> before </div>
summary.NF.html:51:1 (summary.NF.Rd:12): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:754:1 (inst/NEWS.Rd:339): Warning: missing </ul> before </div>
NEWS.html:142:1 (inst/NEWS.Rd:65): Warning: <h4> anchor "Bug-fixes" already defined
NEWS.html:197:1 (inst/NEWS.Rd:90): Warning: <h4> anchor "Bug-fixes" already defined
NEWS.html:240:1 (inst/NEWS.Rd:112): Warning: <h4> anchor "Improvements" already defined
NEWS.html:283:1 (inst/NEWS.Rd:131): Warning: <h4> anchor "Vignette" already defined
NEWS.html:309:1 (inst/NEWS.Rd:144): Warning: <h4> anchor "New-arguments" already defined
NEWS.html:320:1 (inst/NEWS.Rd:149): Warning: <h4> anchor "Improvements" already defined
NEWS.html:343:1 (inst/NEWS.Rd:158): Warning: <h4> anchor "Other" already defined
NEWS.html:386:1 (inst/NEWS.Rd:178): Warning: <h4> anchor "Vignette" already defined
NEWS.html:404:1 (inst/NEWS.Rd:187): Warning: <h4> anchor "New-features" already defined
NEWS.html:427:1 (inst/NEWS.Rd:196): Warning: <h4> anchor "Improvements" already defined
NEWS.html:519:1 (inst/NEWS.Rd:236): Warning: <h4> anchor "Improvements" already defined
NEWS.html:533:1 (inst/NEWS.Rd:242): Warning: <h4> anchor "Documentation" already defined
NEWS.html:548:1 (inst/NEWS.Rd:250): Warning: <h4> anchor "New-features" already defined
NEWS.html:565:1 (inst/NEWS.Rd:257): Warning: <h4> anchor "Documentation" already defined
NEWS.html:582:1 (inst/NEWS.Rd:264): Warning: <h4> anchor "Bug" already defined
NEWS.html:596:1 (inst/NEWS.Rd:270): Warning: <h4> anchor "Miscellaneous" already defined
NEWS.html:637:1 (inst/NEWS.Rd:289): Warning: <h4> anchor "Other" already defined
NEWS.html:686:1 (inst/NEWS.Rd:313): Warning: <h4> anchor "New-Features" already defined
NEWS.html:740:1 (inst/NEWS.Rd:335): Warning: <h4> anchor "Bug-Fixes" already defined
Maintainer: ‘Pablo Saz Parkinson <sazpark2@gmail.com>’

The Description field contains
  Support Center (http://fermi.gsfc.nasa.gov/ssc/).
Please enclose URLs in angle brackets (<...>).
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘calc-squintability.R’ ‘get.R’ ‘pipe-sine-boa.Rd’ ‘plot-projection.R’
    ‘projection.Rd’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘change_column_types.Rd’ ‘create_alter_attr.Rd’ ‘create_edgelist.Rd’
    ‘create_nw.Rd’ ‘create_relation_labels.Rd’ ‘create_tidygraph.Rd’
    ‘fix_errors.Rd’ ‘produce_data.R’ ‘translate.Rd’
Running ‘spelling.R’ [0s/0s]
  Running ‘testthat.R’ [179s/231s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # tests/testthat.R
  > 
  > library(testthat)
  > library(ffaframework) 
  > test_check("ffaframework")
  [ FAIL 1 | WARN 0 | SKIP 24 | PASS 985 ]
  
  ══ Skipped tests (24) ══════════════════════════════════════════════════════════
  • On CRAN (9): 'test-select-zstatistic.R:36:2',
    'test-select-zstatistic.R:69:2', 'test-select-zstatistic.R:102:2',
    'test-select-zstatistic.R:135:2', 'test-select-zstatistic.R:168:2',
    'test-uncertainty-bootstrap.R:24:2', 'test-uncertainty-bootstrap.R:104:2',
    'test-uncertainty-rfgpl.R:47:2', 'test-uncertainty-rfpl.R:113:2'
  • Skip on R CMD check (15): 'test-plots.R:3:2', 'test-plots.R:30:2',
    'test-plots.R:50:2', 'test-plots.R:77:2', 'test-plots.R:104:2',
    'test-plots.R:124:2', 'test-plots.R:142:2', 'test-plots.R:161:2',
    'test-plots.R:175:2', 'test-plots.R:190:2', 'test-plots.R:209:2',
    'test-plots.R:241:2', 'test-plots.R:262:2', 'test-plots.R:318:2',
    'test-plots.R:337:2'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-data-loading.R:16:2'): data-local.R and data-geomet.R work properly and produce same results ──
  nrow(geomet_df) not equal to 102.
  1/1 mismatches
  [1] 103 - 102 == 1
  
  [ FAIL 1 | WARN 0 | SKIP 24 | PASS 985 ]
  Error: Test failures
  Execution halted
Found the following HTML validation problems:
param-alpha.html:41:1 (param-alpha.Rd:8): Warning: missing </ul> before </div>
param-data.html:41:1 (param-data.Rd:8): Warning: missing </ul> before </div>
param-distribution.html:42:1 (param-distribution.Rd:9): Warning: missing </ul> before </div>
param-generate-report.html:40:1 (param-generate-report.Rd:7): Warning: missing </ul> before </div>
param-method.html:41:1 (param-method.Rd:8): Warning: missing </ul> before </div>
param-ns-slice.html:42:1 (param-ns-slice.Rd:9): Warning: missing </ul> before </div>
param-ns-slices.html:42:1 (param-ns-slices.Rd:9): Warning: missing </ul> before </div>
param-ns-splits.html:44:1 (param-ns-splits.Rd:11): Warning: missing </ul> before </div>
param-ns-structure.html:50:1 (param-ns-structure.Rd:12): Warning: missing </ul> before </div>
param-ns-structures.html:44:1 (param-ns-structures.Rd:11): Warning: missing </ul> before </div>
param-ns-years.html:41:1 (param-ns-years.Rd:8): Warning: missing </ul> before </div>
param-p.html:40:1 (param-p.Rd:7): Warning: missing </ul> before </div>
param-params.html:42:1 (param-params.Rd:9): Warning: missing </ul> before </div>
param-periods.html:41:1 (param-periods.Rd:8): Warning: missing </ul> before </div>
param-prior.html:41:1 (param-prior.Rd:8): Warning: missing </ul> before </div>
param-q.html:40:1 (param-q.Rd:7): Warning: missing </ul> before </div>
param-report-formats.html:41:1 (param-report-formats.Rd:8): Warning: missing </ul> before </div>
param-report-path.html:41:1 (param-report-path.Rd:8): Warning: missing </ul> before </div>
param-samples.html:40:1 (param-samples.Rd:7): Warning: missing </ul> before </div>
param-tolerance.html:41:1 (param-tolerance.Rd:8): Warning: missing </ul> before </div>
param-years.html:41:1 (param-years.Rd:8): Warning: missing </ul> before </div>
Maintainer: ‘Ian Kopacka <ian.kopacka@ages.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ian",
                    family = "Kopacka",
                    role = c("aut", "cre"),
                    email = "ian.kopacka@ages.at")
as necessary.
Unexported object imported by a ':::' call: ‘bit:::R_bit_as_hi’
  See the note in ?`:::` about the use of this operator.
Found the following HTML validation problems:
Forbidden_ffdf.html:59:1 (Forbidden_ffdf.rd:24): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-add_allplay.html:50:1 (dot-add_allplay.Rd:12): Warning: missing </ul> before </div>
dot-fn_set_ratelimit.html:55:1 (dot-fn_set_ratelimit.Rd:14): Warning: missing </ul> before </div>
dot-retry_get.html:46:1 (dot-retry_get.Rd:10): Warning: missing </ul> before </div>
dot-retry_post.html:46:1 (dot-retry_post.Rd:10): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘add_cplx.Rd’ ‘add_l2nm.Rd’ ‘can_repr.Rd’ ‘cross.R’ ‘fft.R’
    ‘fftab.Rd’ ‘fourier_frequencies.Rd’ ‘frequency.R’ ‘get.R’ ‘get_fx.Rd’
    ‘get_rect.Rd’ ‘has_cplx.Rd’ ‘internal.R’ ‘plot.R’ ‘repr.R’
    ‘to_cplx.Rd’
Found the following HTML validation problems:
dot-shift_phase.html:50:1 (dot-shift_phase.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
fact_clean.html:54:1 (fact_clean.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Karim Rahim <karim.rahim@queensu.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Karim",
                    family = "Rahim",
                    role = c("aut", "cre"),
                    email = "karim.rahim@queensu.ca")
as necessary.
Maintainer: ‘Dariush Najarzadeh <D_Najarzadeh@sbu.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dariush",
                    family = "Najarzadeh",
                    role = c("aut", "cre"),
                    email = "d_najarzadeh@sbu.ac.ir")
as necessary.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:440:1 (inst/NEWS.Rd:331): Warning: missing </ul> before </div>
NEWS.html:223:1 (inst/NEWS.Rd:182): Warning: <h4> anchor "NEW-MAINTAINER" already defined
NEWS.html:250:1 (inst/NEWS.Rd:198): Warning: <h4> anchor "NEW-MAINTAINER" already defined
NEWS.html:283:1 (inst/NEWS.Rd:217): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:329:1 (inst/NEWS.Rd:248): Warning: <h4> anchor "Misc" already defined
NEWS.html:349:1 (inst/NEWS.Rd:275): Warning: <h4> anchor "Misc" already defined
NEWS.html:374:1 (inst/NEWS.Rd:294): Warning: <h4> anchor "Misc" already defined
NEWS.html:395:1 (inst/NEWS.Rd:304): Warning: <h4> anchor "Misc" already defined
Found the following HTML validation problems:
headers.html:40:1 (headers.Rd:7): Warning: missing </ul> before </div>
Found the following HTML validation problems:
fgit_clone_from_url.html:58:1 (fgit_clone_from_url.Rd:16): Warning: missing </ul> before </div>
func_mk_dir.html:54:1 (func_mk_dir.Rd:14): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FGLMtrunc.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Clayton Vieira Fraga Filho <forestgrowthsoftware@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Clayton", "Vieira", "Fraga"),
                      family = "Filho",
                      role = c("aut", "cre"),
                      email = "forestgrowthsoftware@gmail.com"),
               person(given = c("Ana", "Paula"),
                      family = "Simiqueli",
                      role = "aut"),
               person(given = c("Gilson", "Fernandes", "da"),
                      family = "Silva",
                      role = "aut"),
               person(given = "Miqueias",
                      family = "Fernandes",
                      role = "aut"),
               person(given = c("Wagner", "Amorim", "da", "Silva"),
                      family = "Altoe",
                      role = "aut"))
as necessary.
checkRd: (-1) contemParametros.Rd:19: Lost braces
    19 | \item{exclui3pontos}{verify por ... ? in f<-function(a, ...){ }}
       |                                                             ^
Found the following HTML validation problems:
avaliaAjuste.html:84:1 (avaliaAjuste.Rd:30): Warning: missing </ul> before </div>
defineClasses.html:67:1 (defineClasses.Rd:21): Warning: missing </ul> before </div>
getGraphicHistogram.html:67:1 (getGraphicHistogram.Rd:21): Warning: missing </ul> before </div>
getGraphicObservadoXEstimado.html:85:1 (getGraphicObservadoXEstimado.Rd:31): Warning: missing </ul> before </div>
getGraphicResiduoAbs.html:81:1 (getGraphicResiduoAbs.Rd:29): Warning: missing </ul> before </div>
getGraphicResiduoPerc.html:81:1 (getGraphicResiduoPerc.Rd:29): Warning: missing </ul> before </div>
rrmse.html:50:1 (rrmse.Rd:12): Warning: missing </ul> before </div>
salvaModelo.html:50:1 (salvaModelo.Rd:12): Warning: missing </ul> before </div>
separaDados.html:58:1 (separaDados.Rd:16): Warning: missing </ul> before </div>
syx.html:58:1 (syx.Rd:16): Warning: missing </ul> before </div>
syxPerc.html:50:1 (syxPerc.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Thomas Hoffmann <tjhoffm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Hoffmann",
                    role = c("aut", "cre"),
                    email = "tjhoffm@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
fhir_authenticate.html:84:1 (fhir_authenticate.Rd:37): Warning: missing </ul> before </div>
Maintainer: ‘Ramon Oller <ramon.oller@uvic.cat>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ramon",
                      family = "Oller",
                      role = c("aut", "cre"),
                      email = "ramon.oller@uvic.cat"),
               person(given = "Klaus",
                      family = "Langohr",
                      role = "aut"))
as necessary.
Maintainer: ‘Natalya Pya Arnqvist <nat.pya@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Natalya", "Pya"),
                      family = "Arnqvist",
                      role = c("aut", "cre"),
                      email = "nat.pya@gmail.com"),
               person(given = c("Sara", "Sjöstedt"),
                      family = "de Luna",
                      role = "aut"),
               person(given = "Konrad",
                      family = "Abramowicz",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
flame.html:59:1 (flame.Rd:47): Warning: missing </ul> before </div>
minitri.html:68:1 (minitri.Rd:53): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dfs_equal.html:54:1 (dfs_equal.Rd:12): Warning: missing </ul> before </div>
get_file_info.html:46:1 (get_file_info.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Roger D. Peng <roger.peng@austin.utexas.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Roger", "D."),
                    family = "Peng",
                    role = c("aut", "cre"),
                    email = "roger.peng@austin.utexas.edu")
as necessary.
Found the following HTML validation problems:
coerceDB1RDS.html:40:1 (coerceDB1RDS.Rd:8): Warning: missing </ul> before </div>
coerceDB1list.html:40:1 (coerceDB1list.Rd:8): Warning: missing </ul> before </div>
coercelist.html:40:1 (coercelist.Rd:8): Warning: missing </ul> before </div>
registerFormatDB.html:50:1 (registerFormatDB.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Roger D. Peng <roger.peng@austin.utexas.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Roger", "D."),
                    family = "Peng",
                    role = c("aut", "cre"),
                    email = "roger.peng@austin.utexas.edu")
as necessary.
Maintainer: ‘Kridsadakorn Chaichoompu <kridsadakorn@biostatgen.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
fill_missing.html:58:1 (fill_missing.Rd:16): Warning: missing </ul> before </div>
fill_vector_interval.html:46:1 (fill_vector_interval.Rd:10): Warning: missing </ul> before </div>
fill_vector_last.html:50:1 (fill_vector_last.Rd:12): Warning: missing </ul> before </div>
fill_vector_max.html:50:1 (fill_vector_max.Rd:12): Warning: missing </ul> before </div>
fill_vector_min.html:50:1 (fill_vector_min.Rd:12): Warning: missing </ul> before </div>
fill_vector_previous.html:46:1 (fill_vector_previous.Rd:10): Warning: missing </ul> before </div>
fill_vector_strict.html:50:1 (fill_vector_strict.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
catTestfisher.html:46:1 (catTestfisher.Rd:10): Warning: missing </ul> before </div>
condense_fit.html:83:1 (condense_fit.Rd:34): Warning: missing </ul> before </div>
extract_fit.html:176:1 (extract_fit.Rd:120): Warning: missing </ul> before </div>
ff_eval.html:47:1 (ff_eval.Rd:10): Warning: missing </ul> before </div>
format_n_percent.html:62:1 (format_n_percent.Rd:18): Warning: missing </ul> before </div>
plot_title.html:60:1 (plot_title.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-final_size.html:48:1 (dot-final_size.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Xuanhua(Peter) Yin <peteryin.sju@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xuanhua",
                      family = "Yin",
                      role = "aut",
                      email = "peteryin.sju@hotmail.com",
                      comment = "Peter"),
               person(given = "Xuanhua",
                      family = "Yin",
                      role = "cre",
                      email = "peteryin.sju@hotmail.com",
                      comment = "Peter"))
as necessary.
Maintainer: ‘Felix Yanhui Fan <nolanfyh@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Felix", "Yanhui"),
                    family = "Fan",
                    role = c("aut", "cre"),
                    email = "nolanfyh@gmail.com")
as necessary.
Found the following HTML validation problems:
plot.CovCv.html:51:1 (plot.CovCv.Rd:12): Warning: missing </ul> before </div>
print.CovCv.html:51:1 (print.CovCv.Rd:12): Warning: missing </ul> before </div>
summary.CovCv.html:51:1 (summary.CovCv.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.CausalANOVA.html:79:1 (plot.CausalANOVA.Rd:30): Warning: missing </ul> before </div>
summary.CausalANOVA.html:63:1 (summary.CausalANOVA.Rd:18): Warning: missing </ul> before </div>
summary.FindIt.html:51:1 (summary.FindIt.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Thibault Sellam <thibault.sellam@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thibault",
                    family = "Sellam",
                    role = c("aut", "cre"),
                    email = "thibault.sellam@gmail.com")
as necessary.
Maintainer: ‘Reiichiro Nakamichi <nakamichi@affrc.go.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Reiichiro",
                      family = "Nakamichi",
                      role = c("aut", "cre"),
                      email = "nakamichi@affrc.go.jp"),
               person(given = "Shuichi",
                      family = "Kitada",
                      role = "aut"),
               person(given = "Hirohisa",
                      family = "Kishino",
                      role = "aut"))
as necessary.
Maintainer: ‘Reiichiro Nakamichi <nakamichi_reiichiro33@fra.go.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Reiichiro",
                      family = "Nakamichi",
                      role = c("aut", "cre"),
                      email = "nakamichi_reiichiro33@fra.go.jp"),
               person(given = "Hirohisa",
                      family = "Kishino",
                      role = "aut"),
               person(given = "Shuichi",
                      family = "Kitada",
                      role = "aut"))
as necessary.
Maintainer: ‘Rajarshi Guha <rajarshi.guha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rajarshi",
                    family = "Guha",
                    role = c("aut", "cre"),
                    email = "rajarshi.guha@gmail.com")
as necessary.
checkRd: (-1) bitspec.Rd:8: Escaped LaTeX specials: \&
Found the following HTML validation problems:
LDA_plot.html:62:1 (LDA_plot.Rd:18): Warning: missing </ul> before </div>
PCA_plot.html:54:1 (PCA_plot.Rd:14): Warning: missing </ul> before </div>
correlation_plot.html:68:1 (correlation_plot.Rd:24): Warning: missing </ul> before </div>
inputMixture.html:46:1 (inputMixture.Rd:10): Warning: missing </ul> before </div>
inputSource.html:50:1 (inputSource.Rd:12): Warning: missing </ul> before </div>
plot_results.html:78:1 (plot_results.Rd:30): Warning: missing </ul> before </div>
write_results.html:46:1 (write_results.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Benjamin Baumgartner <benjamin@baumgrt.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
finna_as_json.html:49:1 (finna_as_json.Rd:13): Warning: missing </ul> before </div>
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘00.helpers.R’ ‘01.firm_register.R’ ‘02.FOandFM.R’ ‘03.people.R’
    ‘04.FF_either.R’ ‘05.network&graph.R’
Found the following HTML validation problems:
cubist_multistep_fit_impl.html:88:1 (cubist_multistep_fit_impl.Rd:36): Warning: missing </ul> before </div>
glmnet_multistep_fit_impl.html:83:1 (glmnet_multistep_fit_impl.Rd:33): Warning: missing </ul> before </div>
mars_multistep_fit_impl.html:89:1 (mars_multistep_fit_impl.Rd:37): Warning: missing </ul> before </div>
svm_poly_multistep_fit_impl.html:96:1 (svm_poly_multistep_fit_impl.Rd:42): Warning: missing </ul> before </div>
svm_rbf_multistep_fit_impl.html:90:1 (svm_rbf_multistep_fit_impl.Rd:38): Warning: missing </ul> before </div>
xgboost_multistep_fit_impl.html:138:1 (xgboost_multistep_fit_impl.Rd:70): Warning: missing </ul> before </div>
Maintainer: ‘Jan Greve <jan.greve@wu.ac.at>’

The Description field contains
  (2020) <arXiv:2005.09918>). For methodological details, please refer to
  <arXiv:2012.12337>) as well as the package vignette.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fipp.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
CORS.html:234:1 (CORS.Rd:163): Warning: <h5> anchor "Usage" already defined
CORS.html:248:1 (CORS.Rd:175): Warning: <h5> anchor "Arguments" already defined
CORS.html:319:1 (CORS.Rd:227): Warning: <h5> anchor "Usage" already defined
CORS.html:325:1 (CORS.Rd:231): Warning: <h5> anchor "Arguments" already defined
CORS.html:350:1 (CORS.Rd:246): Warning: <h5> anchor "Usage" already defined
CORS.html:356:1 (CORS.Rd:250): Warning: <h5> anchor "Arguments" already defined
ResourceIsolation.html:199:1 (ResourceIsolation.Rd:138): Warning: <h5> anchor "Usage" already defined
ResourceIsolation.html:210:1 (ResourceIsolation.Rd:147): Warning: <h5> anchor "Arguments" already defined
ResourceIsolation.html:245:1 (ResourceIsolation.Rd:172): Warning: <h5> anchor "Usage" already defined
ResourceIsolation.html:251:1 (ResourceIsolation.Rd:176): Warning: <h5> anchor "Arguments" already defined
ResourceIsolation.html:276:1 (ResourceIsolation.Rd:191): Warning: <h5> anchor "Usage" already defined
ResourceIsolation.html:282:1 (ResourceIsolation.Rd:195): Warning: <h5> anchor "Arguments" already defined
SecurityHeaders.html:441:1 (SecurityHeaders.Rd:367): Warning: <h5> anchor "Usage" already defined
SecurityHeaders.html:447:1 (SecurityHeaders.Rd:371): Warning: <h5> anchor "Arguments" already defined
SecurityHeaders.html:472:1 (SecurityHeaders.Rd:386): Warning: <h5> anchor "Usage" already defined
SecurityHeaders.html:478:1 (SecurityHeaders.Rd:390): Warning: <h5> anchor "Arguments" already defined
Found the following HTML validation problems:
FireSale.html:163:1 (FireSale.Rd:104): Warning: <h5> anchor "Usage" already defined
FireSale.html:169:1 (FireSale.Rd:108): Warning: <h5> anchor "Arguments" already defined
FireSale.html:193:1 (FireSale.Rd:122): Warning: <h5> anchor "Usage" already defined
FireSale.html:199:1 (FireSale.Rd:126): Warning: <h5> anchor "Arguments" already defined
FireSale.html:225:1 (FireSale.Rd:142): Warning: <h5> anchor "Usage" already defined
FireSale.html:231:1 (FireSale.Rd:146): Warning: <h5> anchor "Arguments" already defined
FireSale.html:260:1 (FireSale.Rd:165): Warning: <h5> anchor "Usage" already defined
FireSale.html:266:1 (FireSale.Rd:169): Warning: <h5> anchor "Arguments" already defined
FireSale.html:291:1 (FireSale.Rd:184): Warning: <h5> anchor "Usage" already defined
FireSale.html:297:1 (FireSale.Rd:188): Warning: <h5> anchor "Arguments" already defined
Found the following HTML validation problems:
ReverseProxy.html:137:1 (ReverseProxy.Rd:99): Warning: <h5> anchor "Usage" already defined
ReverseProxy.html:143:1 (ReverseProxy.Rd:103): Warning: <h5> anchor "Arguments" already defined
ReverseProxy.html:168:1 (ReverseProxy.Rd:118): Warning: <h5> anchor "Usage" already defined
ReverseProxy.html:174:1 (ReverseProxy.Rd:122): Warning: <h5> anchor "Arguments" already defined
Found the following HTML validation problems:
alba_boot.html:58:1 (alba_boot.Rd:17): Warning: missing </ul> before </div>
bonito_boot.html:63:1 (bonito_boot.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Charles Bouveyron <charles.bouveyron@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Charles",
                      family = "Bouveyron",
                      role = c("aut", "cre"),
                      email = "charles.bouveyron@gmail.com"),
               person(given = c("Camille", "Brunet", "&", "Nicolas"),
                      family = "Jouvin.",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) FiSh-package.Rd:19: Lost braces
    19 | \doi{10.3389/feart.2020.00255}{Frontiers in Earth Science, 8:255}.
       |                               ^
checkRd: (-1) FiSh-package.Rd:32: Lost braces
    32 | \doi{10.3389/feart.2020.00255}{Frontiers in Earth Science, 8:255}.
       |                               ^
checkRd: (-1) SEP_FIM.Rd:46: Lost braces
    46 | \doi{10.3389/feart.2020.00255}{Frontiers in Earth Science, 8:255}.
       |                               ^
Maintainer: ‘Cory Nissen <corynissen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Cory",
                    family = "Nissen",
                    role = c("aut", "cre"),
                    email = "corynissen@gmail.com")
as necessary.
checkRd: (-1) fitConic.Rd:66-73: Lost braces
    66 | \code{parA }{vector of the six "ABCDEF" coefficients
       |             ^
checkRd: (-1) fitConic.Rd:67: Lost braces
    67 | \code{RSS }{'root sum square' figure of merit describing the relative fit quality}
       |            ^
checkRd: (-1) fitConic.Rd:68: Lost braces
    68 | \code{iters }{number of iterations at convergence}
       |              ^
checkRd: (-1) fitConic.Rd:69-71: Lost braces
    69 | \code{exitCode }{1 means ellipse, 2 means hyperbola, 3 means parabola.
       |                 ^
checkRd: (-1) rotateA.Rd:59: Lost braces; missing escapes or markup?
    59 | For \code{xyrot} {a Nx2 array of the x,y coordinates of the rotated data set. }
       |                  ^
checkRd: (-1) fitmixEM.Rd:51: Escaped LaTeX specials: \&
Found the following HTML validation problems:
center.html:53:1 (center.Rd:14): Warning: missing </ul> before </div>
summary.covfm.html:57:1 (summary.covfm.Rd:16): Warning: missing </ul> before </div>
vcor.html:56:1 (vcor.Rd:14): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘app_server.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  fitode-class.Rd: mle2-class
  fitode.Rd: ode, ginv, mle2
  fitodeMCMC.Rd: ode
  logLik.sensitivity.Rd: ode
  ode.sensitivity.Rd: ode
  summary-fitodeMCMC-method.Rd: effectiveSize, gelman.diag
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
check_link.html:51:1 (check_link.Rd:12): Warning: missing </ul> before </div>
fixpar.html:51:1 (fixpar.Rd:12): Warning: missing </ul> before </div>
grad-odemodel-method.html:55:1 (grad-odemodel-method.Rd:15): Warning: missing </ul> before </div>
jacobian-odemodel-method.html:59:1 (jacobian-odemodel-method.Rd:17): Warning: missing </ul> before </div>
make_prior.html:62:1 (make_prior.Rd:18): Warning: missing </ul> before </div>
ode.sensitivity.html:69:1 (ode.sensitivity.Rd:24): Warning: missing </ul> before </div>
plot_internal.html:108:1 (plot_internal.Rd:48): Warning: missing </ul> before </div>
select_model.html:49:1 (select_model.Rd:13): Warning: missing </ul> before </div>
select_prior.html:63:1 (select_prior.Rd:21): Warning: missing </ul> before </div>
simulate_internal.html:88:1 (simulate_internal.Rd:36): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.plcfit.html:177:1 (plot.plcfit.Rd:82): Warning: missing </ul> before </div>
Found the following HTML validation problems:
writeDatfile.html:92:1 (writeDatfile.Rd:39): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘readData.R’
Found the following HTML validation problems:
rzeta.html:55:1 (rzeta.Rd:14): Warning: missing </ul> before </div>
var.html:50:1 (var.Rd:12): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Maintainer: ‘Andrew Harris <harris@astro.umd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "harris@astro.umd.edu")
as necessary.
Maintainer: ‘Markus Boenn <markus.boenn.sf@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Markus",
                    family = "Boenn",
                    role = c("aut", "cre"),
                    email = "markus.boenn.sf@gmail.com")
as necessary.
Maintainer: ‘José Carlos Del Valle <jcval94@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("José", "Carlos", "Del"),
                    family = "Valle",
                    role = c("aut", "cre"),
                    email = "jcval94@gmail.com")
as necessary.
Found the following HTML validation problems:
parse_team_abbr.html:48:1 (parse_team_abbr.Rd:11): Warning: missing </ul> before </div>
replace_teams.html:48:1 (replace_teams.Rd:11): Warning: missing </ul> before </div>
replace_venues.html:50:1 (replace_venues.Rd:12): Warning: missing </ul> before </div>
team_abr_afl.html:46:1 (team_abr_afl.Rd:10): Warning: missing </ul> before </div>
team_abr_afl2.html:50:1 (team_abr_afl2.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Albert Y. Kim <albert.ys.kim@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) food_world_cup.Rd:70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) food_world_cup.Rd:71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) food_world_cup.Rd:72: Lost braces in \itemize; meant \describe ?
checkRd: (-1) food_world_cup.Rd:73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) food_world_cup.Rd:74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) food_world_cup.Rd:75: Lost braces in \itemize; meant \describe ?
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  fpAnova.Rd: anovaBF
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Stuart Baumann <Stuart@StuartBaumann.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Stuart", "Baumann", "&", "Margaryta"),
                      family = "Klymak",
                      role = "aut"),
               person(given = "Stuart",
                      family = "Baumann",
                      role = "cre",
                      email = "Stuart@StuartBaumann.com"))
as necessary.
Maintainer: ‘Evan Odell <evanodell91@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CODE_OF_CONDUCT.md
    From: README.md
Found the following HTML validation problems:
fixer_api_key.html:53:1 (fixer_api_key.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Yalin Zhu <yalin.zhu@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yalin",
                      family = "Zhu",
                      role = c("aut", "cre"),
                      email = "yalin.zhu@outlook.com"),
               person(given = "Wenge",
                      family = "Guo",
                      role = "aut"))
as necessary.
checkRd: (-1) distribution_vector.Rd:14: Lost braces; missing escapes or markup?
    14 | All standard distributions from {stats} package are covered. For a list
       |                                 ^
Found the following HTML validation problems:
MockDataGenerator.html:202:1 (MockDataGenerator.Rd:105): Warning: missing </ul> before </div>
MockDataGenerator.html:101:1 (MockDataGenerator.Rd:48): Warning: <h5> anchor "Usage" already defined
MockDataGenerator.html:107:1 (MockDataGenerator.Rd:52): Warning: <h5> anchor "Arguments" already defined
MockDataGenerator.html:124:1 (MockDataGenerator.Rd:63): Warning: <h5> anchor "Returns" already defined
MockDataGenerator.html:141:1 (MockDataGenerator.Rd:72): Warning: <h5> anchor "Usage" already defined
MockDataGenerator.html:147:1 (MockDataGenerator.Rd:76): Warning: <h5> anchor "Arguments" already defined
MockDataGenerator.html:162:1 (MockDataGenerator.Rd:85): Warning: <h5> anchor "Returns" already defined
MockDataGenerator.html:179:1 (MockDataGenerator.Rd:94): Warning: <h5> anchor "Usage" already defined
MockDataGenerator.html:185:1 (MockDataGenerator.Rd:98): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘David P. Hofmeyr <dhofmeyr@sun.ac.za>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("David", "P."),
                    family = "Hofmeyr",
                    role = c("aut", "cre"),
                    email = "dhofmeyr@sun.ac.za")
as necessary.
Found the following HTML validation problems:
plot.fk_ICA.html:51:1 (plot.fk_ICA.Rd:12): Warning: missing </ul> before </div>
plot.fk_density.html:55:1 (plot.fk_density.Rd:13): Warning: missing </ul> before </div>
plot.fk_mdh.html:51:1 (plot.fk_mdh.Rd:12): Warning: missing </ul> before </div>
plot.fk_ppr.html:56:1 (plot.fk_ppr.Rd:14): Warning: missing </ul> before </div>
plot.fk_regression.html:55:1 (plot.fk_regression.Rd:13): Warning: missing </ul> before </div>
print.fk_ICA.html:51:1 (print.fk_ICA.Rd:12): Warning: missing </ul> before </div>
print.fk_density.html:51:1 (print.fk_density.Rd:12): Warning: missing </ul> before </div>
print.fk_mdh.html:51:1 (print.fk_mdh.Rd:12): Warning: missing </ul> before </div>
print.fk_ppr.html:51:1 (print.fk_ppr.Rd:12): Warning: missing </ul> before </div>
print.fk_regression.html:51:1 (print.fk_regression.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Pascal Kerschke <kerschke@uni-muenster.de>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘features.Rd’:
    http://dx.doi.org/10.1007/978-3-319-07494-8_9
    http://dx.doi.org/10.1145/2739480.2754642
    http://dx.doi.org/10.1145/1143997.1144085
    http://dx.doi.org/10.1145/2001576.2001690
    http://dx.doi.org/10.1109/TEVC.2014.2302006
  File ‘plotCellMapping.Rd’:
    http://dx.doi.org/10.1007/978-3-319-07494-8_9
  File ‘plotInformationContent.Rd’:
    http://dx.doi.org/10.1109/TEVC.2014.2302006
checkRd: (-1) convertInitDesignToGrid.Rd:11: Lost braces; missing escapes or markup?
    11 | The initial design, consisting of \code{d + 1} columns ({d} dimensions and
       |                                                         ^
Found the following HTML validation problems:
BBOBImport.html:64:1 (BBOBImport.Rd:20): Warning: missing </ul> before </div>
SmoofImport.html:64:1 (SmoofImport.Rd:20): Warning: missing </ul> before </div>
featureObject_sidebar.html:49:1 (featureObject_sidebar.Rd:11): Warning: missing </ul> before </div>
functionInput.html:64:1 (functionInput.Rd:20): Warning: missing </ul> before </div>
Maintainer: ‘Mátyás Mészáros <matyas.meszaros@ec.europa.eu>’

Found the following (possibly) invalid file URI:
  URI: vignettes/flagr_introduction.pdf
    From: README.md
Maintainer: ‘Florian Lecocq <florian.lecocq@outlook.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/flamingos.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) ModelMixHMM-class.Rd:31: Lost braces; missing escapes or markup?
    31 |         \code{smoothed} of class {StatMixHMM}).
       |                                  ^
checkRd: (-1) ModelMixHMMR-class.Rd:31: Lost braces; missing escapes or markup?
    31 |         \code{smoothed} of class {StatMixHMMR}).
       |                                  ^
Maintainer: ‘Ashley Petersen <ashleyjpete@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ashley",
                    family = "Petersen",
                    role = c("aut", "cre"),
                    email = "ashleyjpete@gmail.com")
as necessary.
checkRd: (-1) summary.flamcv.rd:8: Lost braces
     8 | This function summarizes a call to code{\link{flamCV}} and identifies the tuning parameter chosen by cross-validation.
       |                                        ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘projection.R’
Found the following HTML validation problems:
flashCard-shiny.html:70:1 (flashCard-shiny.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Peter Langfelder <Peter.Langfelder@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("code", "by", "Fionn"),
                      family = "Murtagh",
                      role = "aut"),
               person(given = c("R", "development"),
                      family = "team",
                      role = "aut"),
               person(family = "modifications",
                      role = "aut"),
               person(given = c("packaging", "by", "Peter"),
                      family = "Langfelder",
                      role = "aut"),
               person(given = "Peter",
                      family = "Langfelder",
                      role = "cre",
                      email = "Peter.Langfelder@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Malformed Description field: should contain one or more complete sentences.
checkRd: (-1) flashClust.Rd:92: Escaped LaTeX specials: \&
Found the following HTML validation problems:
check_character.html:58:1 (check_character.Rd:16): Warning: missing </ul> before </div>
check_logical.html:50:1 (check_logical.Rd:12): Warning: missing </ul> before </div>
fail_gracefully.html:55:1 (fail_gracefully.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Scott D. Graham <scott.grah95@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Scott", "D."),
                    family = "Graham",
                    role = c("aut", "cre"),
                    email = "scott.grah95@gmail.com")
as necessary.
Found the following HTML validation problems:
print.ct_goodness_of_fit.html:51:1 (print.ct_goodness_of_fit.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘define_labels.Rd’ ‘divide.Rd’ ‘extract_labels.Rd’ ‘fill_labels.Rd’
    ‘fill_values.Rd’ ‘flatten_table_list.Rd’ ‘ft_ex.Rd’ ‘ft_ex_v2.Rd’
    ‘ft_set.Rd’ ‘get_col_values.Rd’ ‘get_page.Rd’ ‘pf_ex_compact.Rd’
    ‘remove_agg.Rd’ ‘remove_bottom.Rd’ ‘remove_cols.Rd’ ‘remove_empty.Rd’
    ‘remove_k.Rd’ ‘remove_left.Rd’ ‘remove_right.Rd’ ‘remove_rows.Rd’
    ‘remove_top.Rd’ ‘replace_dec.Rd’ ‘set_page.Rd’ ‘unpivot.Rd’
Maintainer: ‘Brian D. Williamson <brian.d.williamson@kp.org>’

The Description field contains
  Williamson and Huang (2023+) <arXiv:2202.12989>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Angelo Mazza <a.mazza@unict.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mazza",
                      family = "A.",
                      role = "aut"),
               person(given = "Punzo",
                      family = "A.",
                      role = "aut"),
               person(given = "Ingrassia",
                      family = "S.",
                      role = "aut"),
               person(given = "Angelo",
                      family = "Mazza",
                      role = "cre",
                      email = "a.mazza@unict.it"))
as necessary.
checkRd: (-1) flex_dashboard.Rd:96: Lost braces; missing escapes or markup?
    96 | the `{.storyboard}` attribute to individual pages rather than using the
       |      ^
Found the following HTML validation problems:
gauge-shiny.html:68:1 (gauge-shiny.Rd:25): Warning: missing </ul> before </div>
valueBox-shiny.html:68:1 (valueBox-shiny.Rd:25): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print.FDfitted.html:51:1 (print.FDfitted.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
wb_add_caption.html:68:1 (wb_add_caption.Rd:24): Warning: missing </ul> before </div>
wb_apply_border.html:54:1 (wb_apply_border.Rd:14): Warning: missing </ul> before </div>
wb_apply_cell_styles.html:54:1 (wb_apply_cell_styles.Rd:14): Warning: missing </ul> before </div>
wb_apply_content.html:54:1 (wb_apply_content.Rd:14): Warning: missing </ul> before </div>
wb_apply_text_styles.html:54:1 (wb_apply_text_styles.Rd:14): Warning: missing </ul> before </div>
wb_change_cell_width.html:58:1 (wb_change_cell_width.Rd:16): Warning: missing </ul> before </div>
wb_change_row_height.html:54:1 (wb_change_row_height.Rd:14): Warning: missing </ul> before </div>
checkRd: (-1) fmp.Rd:45: Lost braces; missing escapes or markup?
    45 | If k = 0: (xi_1, ..., x_{C_i - 1}, omega)
       |                         ^
checkRd: (-1) fmp.Rd:47: Lost braces; missing escapes or markup?
    47 | If k = 1: (xi_1, ..., x_{C_i - 1}, omega, alpha1, tau1)
       |                         ^
checkRd: (-1) fmp.Rd:49: Lost braces; missing escapes or markup?
    49 | If k = 2: (xi_1, ..., x_{C_i - 1}, omega, alpha1, tau1, alpha2, tau2)
       |                         ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AICc.Rd: gam
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
print.flexreg.html:51:1 (print.flexreg.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Zhicheng Du <dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
ajfit_flexsurvmix.html:70:1 (ajfit_flexsurvmix.Rd:23): Warning: missing </ul> before </div>
dot-hess_to_cov.html:58:1 (dot-hess_to_cov.Rd:16): Warning: missing </ul> before </div>
dot-hessian.html:70:1 (dot-hessian.Rd:23): Warning: missing </ul> before </div>
get_basepars.html:54:1 (get_basepars.Rd:14): Warning: missing </ul> before </div>
plot_survtrunc.html:54:1 (plot_survtrunc.Rd:15): Warning: missing </ul> before </div>
quantile_flexsurvmix.html:66:1 (quantile_flexsurvmix.Rd:22): Warning: missing </ul> before </div>
summary.flexsurvrtrunc.html:122:1 (summary.flexsurvrtrunc.Rd:64): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as_raster.html:46:1 (as_raster.Rd:10): Warning: missing </ul> before </div>
body_replace_flextable_at_bkm.html:70:1 (body_replace_flextable_at_bkm.Rd:25): Warning: missing </ul> before </div>
footers_flextable_at_bkm.html:46:1 (footers_flextable_at_bkm.Rd:10): Warning: missing </ul> before </div>
headers_flextable_at_bkm.html:46:1 (headers_flextable_at_bkm.Rd:10): Warning: missing </ul> before </div>
plot.flextableGrob.html:51:1 (plot.flextableGrob.Rd:12): Warning: missing </ul> before </div>
regulartable.html:57:1 (regulartable.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Léonie Courcoul <leonie.courcoul@u-bordeaux.fr>’

The Description field contains
  Jacqmin-Gadda (2023) <arXiv:2306.16785>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
pred_s.t.bootstrap.tps.html:66:1 (pred_s.t.bootstrap.tps.Rd:20): Warning: missing </ul> before </div>
pred_s.t.ponctuel.tps.html:62:1 (pred_s.t.ponctuel.tps.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
FlickrAPIRequest.html:76:1 (FlickrAPIRequest.Rd:29): Warning: missing </ul> before </div>
setFlickrAPIKey.html:63:1 (setFlickrAPIKey.Rd:24): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:765:1 (inst/NEWS.Rd:513): Warning: missing </ul> before </div>
NEWS.html:170:1 (inst/NEWS.Rd:95): Warning: <h4> anchor "Description" already defined
NEWS.html:243:1 (inst/NEWS.Rd:145): Warning: <h4> anchor "Methods" already defined
NEWS.html:284:1 (inst/NEWS.Rd:176): Warning: <h4> anchor "New-Features" already defined
NEWS.html:338:1 (inst/NEWS.Rd:218): Warning: <h4> anchor "Bug-Fixes" already defined
NEWS.html:378:1 (inst/NEWS.Rd:241): Warning: <h4> anchor "Documentation" already defined
NEWS.html:391:1 (inst/NEWS.Rd:248): Warning: <h4> anchor "New-Features" already defined
NEWS.html:414:1 (inst/NEWS.Rd:264): Warning: <h4> anchor "Internals" already defined
NEWS.html:430:1 (inst/NEWS.Rd:272): Warning: <h4> anchor "Installation" already defined
NEWS.html:471:1 (inst/NEWS.Rd:300): Warning: <h4> anchor "Installation" already defined
NEWS.html:505:1 (inst/NEWS.Rd:323): Warning: <h4> anchor "Description" already defined
NEWS.html:541:1 (inst/NEWS.Rd:348): Warning: <h4> anchor "Installation" already defined
NEWS.html:569:1 (inst/NEWS.Rd:369): Warning: <h4> anchor "Documentation" already defined
NEWS.html:586:1 (inst/NEWS.Rd:380): Warning: <h4> anchor "Classes" already defined
NEWS.html:652:1 (inst/NEWS.Rd:426): Warning: <h4> anchor "Methods" already defined
NEWS.html:686:1 (inst/NEWS.Rd:453): Warning: <h4> anchor "New-Features" already defined
Found the following HTML validation problems:
flipscores-method.html:60:1 (flipscores-method.Rd:19): Warning: missing </ul> before </div>
Found the following HTML validation problems:
names.html:72:1 (names.Rd:34): Warning: missing </ul> before </div>
Maintainer: ‘Ivan Popivanov <ivan.popivanov@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ivan",
                    family = "Popivanov",
                    role = c("aut", "cre"),
                    email = "ivan.popivanov@gmail.com")
as necessary.
Maintainer: ‘Friederike Deiters <deiters@statistik.tu-dortmund.de>’

The Description field contains
  see Kinsvater et al. (2017) <arXiv:1701.06455>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Gustavo Carvalho <gustavo.bio@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gustavo",
                    family = "Carvalho",
                    role = c("aut", "cre"),
                    email = "gustavo.bio@gmail.com")
as necessary.
Found the following HTML validation problems:
df2phytaxa.html:50:1 (df2phytaxa.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
format_percentage.html:54:1 (format_percentage.Rd:14): Warning: missing </ul> before </div>
is_class.html:50:1 (is_class.Rd:12): Warning: missing </ul> before </div>
quiet_prettyNum.html:50:1 (quiet_prettyNum.Rd:12): Warning: missing </ul> before </div>
replace_num_in_expr.html:54:1 (replace_num_in_expr.Rd:14): Warning: missing </ul> before </div>
update_numbers.html:50:1 (update_numbers.Rd:12): Warning: missing </ul> before </div>
update_x.html:54:1 (update_x.Rd:14): Warning: missing </ul> before </div>
update_y.html:54:1 (update_y.Rd:14): Warning: missing </ul> before </div>
update_y_stack.html:62:1 (update_y_stack.Rd:18): Warning: missing </ul> before </div>
update_y_stack_unite.html:54:1 (update_y_stack_unite.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ch_flows.html:57:1 (ch_flows.Rd:16): Warning: missing </ul> before </div>
ch_locations.html:59:1 (ch_locations.Rd:17): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Resampler.html:203:1 (Resampler.Rd:144): Warning: <h5> anchor "Usage" already defined
Resampler.html:209:1 (Resampler.Rd:148): Warning: <h5> anchor "Returns" already defined
Resampler.html:227:1 (Resampler.Rd:158): Warning: <h5> anchor "Usage" already defined
Resampler.html:233:1 (Resampler.Rd:162): Warning: <h5> anchor "Arguments" already defined
Resampler.html:246:1 (Resampler.Rd:169): Warning: <h5> anchor "Returns" already defined
Resampler.html:263:1 (Resampler.Rd:178): Warning: <h5> anchor "Usage" already defined
Resampler.html:269:1 (Resampler.Rd:182): Warning: <h5> anchor "Arguments" already defined
checkRd: (-1) flow_embed.Rd:30: Lost braces; missing escapes or markup?
    30 | \item Don't forget to add {flow} to Suggests in your DESCRIPTION file.
       |                           ^
Maintainer: ‘Javier Martinez-Lopez <javi.martinez.lopez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Silvestre", "Garcia", "de", "Jalon;", "Javier", "Martinez-Lopez;", "Marta", "Gonzalez", "del", "Tanago;", "Carlos", "Alonso;", "Diego", "Garcia"),
                      family = "de Jalon",
                      role = "aut"),
               person(given = "Javier",
                      family = "Martinez-Lopez",
                      role = "cre",
                      email = "javi.martinez.lopez@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘flowdata.Rd’:
    https://doi.org/10.1007/s11269-017-1663-0
checkRd: (-1) flowdata.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{Flow}{Water flow, in m^{3}/s}
       |                              ^
Maintainer: ‘Constantinos Mavridis <consmavr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Constantinos",
                      family = "Mavridis",
                      role = c("aut", "cre"),
                      email = "consmavr@gmail.com"),
               person(given = c("Ioannis", "N."),
                      family = "Athanasiadis",
                      role = "aut"))
as necessary.
Malformed Description field: should contain one or more complete sentences.
Maintainer: ‘Holger Hoefling <hhoeflin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Holger",
                    family = "Hoefling",
                    role = c("aut", "cre"),
                    email = "hhoeflin@gmail.com")
as necessary.

The Description field contains
  <arXiv:0910.0526>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Jean-Baptiste Ferdy <jean-baptiste.ferdy@univ-tlse3.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jean-Baptiste",
                    family = "Ferdy",
                    role = c("aut", "cre"),
                    email = "jean-baptiste.ferdy@univ-tlse3.fr")
as necessary.
Maintainer: ‘Alberto Hornero <alberto@hornero.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alberto",
                      family = "Hornero",
                      role = c("aut", "cre"),
                      email = "alberto@hornero.es"),
               person(given = "Nastassia",
                      family = "Vilfan",
                      role = "aut"),
               person(given = "Christiaan",
                      family = "van der Tol",
                      role = "aut"),
               person(given = "Onno",
                      family = "Muller",
                      role = "aut"),
               person(given = "Uwe",
                      family = "Rascher",
                      role = "aut"),
               person(given = "Wouter",
                      family = "Verhoef",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘fluspect.Rd’:
    https://doi.org/10.1016/j.rse.2016.09.017
Found the following HTML validation problems:
flux_cut.html:54:1 (flux_cut.Rd:14): Warning: missing </ul> before </div>
flux_fit_type.html:61:1 (flux_fit_type.Rd:20): Warning: missing </ul> before </div>
flux_fortify.html:77:1 (flux_fortify.Rd:31): Warning: missing </ul> before </div>
flux_fortify_exp.html:51:1 (flux_fortify_exp.Rd:12): Warning: missing </ul> before </div>
flux_fortify_lin.html:47:1 (flux_fortify_lin.Rd:10): Warning: missing </ul> before </div>
flux_fortify_quadratic.html:47:1 (flux_fortify_quadratic.Rd:10): Warning: missing </ul> before </div>
flux_match_col.html:60:1 (flux_match_col.Rd:18): Warning: missing </ul> before </div>
flux_match_fixed.html:57:1 (flux_match_fixed.Rd:17): Warning: missing </ul> before </div>
flux_param_exp.html:49:1 (flux_param_exp.Rd:10): Warning: missing </ul> before </div>
flux_param_kappamax.html:49:1 (flux_param_kappamax.Rd:10): Warning: missing </ul> before </div>
flux_param_lm.html:49:1 (flux_param_lm.Rd:10): Warning: missing </ul> before </div>
flux_param_qua.html:49:1 (flux_param_qua.Rd:10): Warning: missing </ul> before </div>
flux_plot_flag.html:51:1 (flux_plot_flag.Rd:12): Warning: missing </ul> before </div>
flux_plot_longpdf.html:59:1 (flux_plot_longpdf.Rd:17): Warning: missing </ul> before </div>
flux_plot_pdf.html:59:1 (flux_plot_pdf.Rd:17): Warning: missing </ul> before </div>
flux_print_plot.html:51:1 (flux_print_plot.Rd:13): Warning: missing </ul> before </div>
flux_quality_kappamax.html:103:1 (flux_quality_kappamax.Rd:47): Warning: missing </ul> before </div>
Maintainer: ‘Gerald Jurasinski <gerald.jurasinski@uni-rostock.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gerald",
                      family = "Jurasinski",
                      role = c("aut", "cre"),
                      email = "gerald.jurasinski@uni-rostock.de"),
               person(given = "Franziska",
                      family = "Koebsch",
                      role = "aut"),
               person(given = "Anke",
                      family = "Guenther",
                      role = "aut"),
               person(given = "Sascha",
                      family = "Beetz",
                      role = "aut"))
as necessary.
Found the following files/directories:
  ‘flux.CH4.txt’
Author field differs from that derived from Authors@R
  Author:    ‘George Vega Yon [aut, cre] (<https://orcid.org/0000-0002-3171-0844>), Paul Marjoram [ctb, ths] (<https://orcid.org/0000-0003-0824-7449>), National Cancer Institute (NCI) [fnd] (Grant Number 5P01CA196569-02), Fabian Scheipl [rev] (JOSS reviewer, <https://orcid.org/0000-0001-8172-3603>)’
  Authors@R: ‘George Vega Yon [aut, cre] (ORCID: <https://orcid.org/0000-0002-3171-0844>), Paul Marjoram [ctb, ths] (ORCID: <https://orcid.org/0000-0003-0824-7449>), National Cancer Institute (NCI) [fnd] (Grant Number 5P01CA196569-02), Fabian Scheipl [rev] (what: JOSS reviewer, ORCID: <https://orcid.org/0000-0001-8172-3603>)’
Maintainer: ‘Shwetank Lall <shwetanklall@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Yan Li <yan.4.li@uconn.edu>’

The Description field contains
  <arXiv:2003.04787>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fmerPack.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
fm_area.html:56:1 (fm_area.Rd:18): Warning: missing </ul> before </div>
fmesher_qinv.html:48:1 (fmesher_qinv.Rd:10): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
  Warning: replacing previous import ‘e1071::element’ by ‘ggplot2::element’ when loading ‘fmf’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fmf.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Niels G. Waller <nwaller@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Niels", "G."),
                    family = "Waller",
                    role = c("aut", "cre"),
                    email = "nwaller@umn.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) FMP.Rd:30: Lost braces; missing escapes or markup?
    30 | \eqn{m(\theta) = b_0 + b_1 \theta + b_2 \theta^2 + b_3 \theta^3}. Acceptable values of k = {0,1,2,3}. According to 
       |                                                                                            ^
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:62:1 (inst/NEWS.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
data_CompCor_Params.html:99:1 (data_CompCor_Params.Rd:62): Warning: missing </ul> before </div>
noise_Params.html:60:1 (noise_Params.Rd:25): Warning: missing </ul> before </div>
pscrub_Params.html:148:1 (pscrub_Params.Rd:93): Warning: missing </ul> before </div>
Found the following HTML validation problems:
data_CompCor_Params.html:99:1 (data_CompCor_Params.Rd:62): Warning: missing </ul> before </div>
despike_3D.interpolate.html:55:1 (despike_3D.interpolate.Rd:15): Warning: missing </ul> before </div>
noise_Params.html:60:1 (noise_Params.Rd:25): Warning: missing </ul> before </div>
plot_FC.html:110:1 (plot_FC.Rd:54): Warning: missing </ul> before </div>
Maintainer: ‘Minato Nakazawa <minatonakazawa@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Minato",
                    family = "Nakazawa",
                    role = c("aut", "cre"),
                    email = "minatonakazawa@gmail.com")
as necessary.
Maintainer: ‘Luis Benites Sanchez <lbenitesanchez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luis", "Benites"),
                      family = "Sanchez",
                      role = c("aut", "cre"),
                      email = "lbenitesanchez@gmail.com"),
               person(given = c("Rocio", "Paola"),
                      family = "Maehara",
                      role = "aut"),
               person(given = c("Victor", "Hugo"),
                      family = "Lachos",
                      role = "aut"))
as necessary.
Maintainer: ‘Daniel Wilson <hmp.R.package@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Geoff",
                      family = "Robinson",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Wilson",
                      role = "cre",
                      email = "hmp.R.package@gmail.com"))
as necessary.
checkRd: (-1) Estable.Rd:40: Lost braces
    40 |   \code{dEstable}{ gives the density function;}
       |                  ^
checkRd: (-1) Estable.Rd:41: Lost braces
    41 |   \code{pEstable}{ gives the distribution function or its complement;}
       |                  ^
checkRd: (-1) Estable.Rd:42: Lost braces
    42 |   \code{qEstable}{ gives quantiles;}
       |                  ^
checkRd: (-1) Estable.Rd:43-56: Lost braces
    43 |   \code{tailsEstable}{ returns a list with the following components
       |                      ^
checkRd: (-1) FMstable.Rd:50: Lost braces
    50 |   \code{dFMstable}{ gives the density function;}
       |                   ^
checkRd: (-1) FMstable.Rd:51: Lost braces
    51 |   \code{pFMstable}{ gives the distribution function or its complement;}
       |                   ^
checkRd: (-1) FMstable.Rd:52: Lost braces
    52 |   \code{qFMstable}{ gives quantiles;}
       |                   ^
checkRd: (-1) FMstable.Rd:53-66: Lost braces
    53 |   \code{tailsFMstable}{  returns a list with the following components
       |                       ^
Maintainer: ‘Stefan Theussl <Stefan.Theussl@R-Project.org>’

The Description field contains
  <arXiv:0911.2093> to manage, investigate and analyze bivariate and
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Haeran Cho <haeran.cho@bristol.ac.uk>’

The Description field contains
  methodology and Owens, Cho and Barigozzi (2024+) <arXiv:2301.11675>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Mona Azadkia <monaazadkia@gmail.com>’

The Description field contains
  simple measure of conditional dependence" <arXiv:1910.12327>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
check_cran_results.html:46:1 (check_cran_results.Rd:10): Warning: missing </ul> before </div>
checkRd: (-1) navbar_page.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) navbar_page.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) navbar_page.Rd:38: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
fontset_register.html:54:1 (fontset_register.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Leo N. Geppert <geppert@statistik.uni-dortmund.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Leo", "N."),
                      family = "Geppert",
                      role = c("aut", "cre"),
                      email = "geppert@statistik.uni-dortmund.de"),
               person(given = "Peter",
                      family = "Gnändinger",
                      role = "ctb"),
               person(given = "Katja",
                      family = "Ickstadt",
                      role = "ctb"),
               person(given = "Björn",
                      family = "Bornkamp",
                      role = "ctb"),
               person(given = "Arno",
                      family = "Fritsch",
                      role = "ctb"),
               person(given = "Oliver",
                      family = "Kuß",
                      role = "ctb"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘airport_footprint.R’ ‘airport_footprint.Rd’ ‘latlong_footprint.R’
    ‘latlong_footprint.Rd’
Maintainer: ‘Tianshu Chen <tianshu129@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tianshu",
                    family = "Chen",
                    role = c("aut", "cre"),
                    email = "tianshu129@163.com")
as necessary.
Maintainer: ‘Marcos Bella-Fernández <marcosbellafernandez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marcos",
                    family = "Bella-Fernández",
                    role = c("aut", "cre"),
                    email = "marcosbellafernandez@gmail.com")
as necessary.
Maintainer: ‘Rodrigo Aluizio <r.aluizio@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rodrigo",
                    family = "Aluizio",
                    role = c("aut", "cre"),
                    email = "r.aluizio@gmail.com")
as necessary.
Maintainer: ‘Georg M. Goerg <im@gmge.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) foreca.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:78-80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:81-83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:84-87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:88-90: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:91-92: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) foreca.Rd:93: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) initialize_weightvector.Rd:53-54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:60-61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) initialize_weightvector.Rd:64-65: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
common-arguments.html:105:1 (common-arguments.Rd:50): Warning: missing </ul> before </div>
Maintainer: ‘Eran Raviv  <eeraviv@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Eran",
                    family = "Raviv",
                    role = c("aut", "cre"),
                    email = "eeraviv@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mod_carga_datos.R’ ‘mod_comparacion.R’ ‘mod_descom.R’
    ‘mod_descom_utils.R’ ‘mod_desvio.R’ ‘mod_model_arima_utils.R’
    ‘mod_normal_utils.R’ ‘mod_nuevos.R’ ‘mod_periodograma.R’
    ‘mod_periodograma_utils_.R’ ‘mod_t_c.R’ ‘mod_t_c_utils.R’
    ‘mod_train_test.R’ ‘ts_utils.R’
Found the following HTML validation problems:
run_app.html:46:1 (run_app.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
checkCVArguments.html:56:1 (checkCVArguments.Rd:16): Warning: missing </ul> before </div>
checkModelArgs.html:50:1 (checkModelArgs.Rd:12): Warning: missing </ul> before </div>
checkParallelArguments.html:50:1 (checkParallelArguments.Rd:12): Warning: missing </ul> before </div>
plotFitted.html:55:1 (plotFitted.Rd:15): Warning: missing </ul> before </div>
plotModelObjects.html:55:1 (plotModelObjects.Rd:15): Warning: missing </ul> before </div>
prepareTimeseries.html:46:1 (prepareTimeseries.Rd:10): Warning: missing </ul> before </div>
removeModels.html:50:1 (removeModels.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Nickalus Redell <nickalusredell@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nickalus",
                    family = "Redell",
                    role = c("aut", "cre"),
                    email = "nickalusredell@gmail.com")
as necessary.
Found the following HTML validation problems:
is.constant.html:46:1 (is.constant.Rd:10): Warning: missing </ul> before </div>
is.ets.html:62:1 (is.ets.Rd:35): Warning: missing </ul> before </div>
is.forecast.html:50:1 (is.forecast.Rd:16): Warning: missing </ul> before </div>
modeldf.html:50:1 (modeldf.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Tobias Kley <tobias.kley@bristol.ac.uk>’

The Description field contains
  <arXiv:1611.04460>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Author field differs from that derived from Authors@R
  Author:    ‘R Core Team [aut, cph, cre] (02zz1nj61), Roger Bivand [ctb, cph], Vincent J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen [ctb, cph], Rajarshi Guha [ctb, cph], Swetlana Herbrandt [ctb], Nicholas Lewin-Koh [ctb, cph], Mark Myatt [ctb, cph], Michael Nelson [ctb], Ben Pfaff [ctb], Brian Quistorff [ctb], Frank Warmerdam [ctb, cph], Stephen Weigand [ctb, cph], Free Software Foundation, Inc. [cph]’
  Authors@R: ‘R Core Team [aut, cph, cre] (ROR: <https://ror.org/02zz1nj61>), Roger Bivand [ctb, cph], Vincent J. Carey [ctb, cph], Saikat DebRoy [ctb, cph], Stephen Eglen [ctb, cph], Rajarshi Guha [ctb, cph], Swetlana Herbrandt [ctb], Nicholas Lewin-Koh [ctb, cph], Mark Myatt [ctb, cph], Michael Nelson [ctb], Ben Pfaff [ctb], Brian Quistorff [ctb], Frank Warmerdam [ctb, cph], Stephen Weigand [ctb, cph], Free Software Foundation, Inc. [cph]’
Maintainer: ‘Tom Wilson <tpw2@aber.ac.uk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  Melanie Ganz (2014) <arXiv:1410.2838>.  Methods for calculating the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Haddouchi Maïssae <maissaem7@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haddouchi",
                    family = "Maïssae",
                    role = c("aut", "cre"),
                    email = "maissaem7@gmail.com")
as necessary.
Maintainer: ‘Benjamin Lu <b.lu@berkeley.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Benjamin",
                      family = "Lu",
                      role = c("aut", "cre"),
                      email = "b.lu@berkeley.edu"),
               person(given = "Johanna",
                      family = "Hardin",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
summary.html:64:1 (summary.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Nick Kennedy <r@nick-kennedy.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Kennedy",
                    role = c("aut", "cre"),
                    email = "r@nick-kennedy.com")
as necessary.
Found the following HTML validation problems:
check_errors.html:160:1 (check_errors.Rd:92): Warning: missing </ul> before </div>
make_arrow.html:77:1 (make_arrow.Rd:31): Warning: missing </ul> before </div>
xscale.html:65:1 (xscale.Rd:23): Warning: missing </ul> before </div>
Found the following HTML validation problems:
drawHorizontalLines.html:56:1 (drawHorizontalLines.Rd:16): Warning: missing </ul> before </div>
prepLines.html:67:1 (prepLines.Rd:23): Warning: missing </ul> before </div>
safeLoadPackage.html:46:1 (safeLoadPackage.Rd:10): Warning: missing </ul> before </div>
checkRd: (-1) process_pcl.Rd:28: Lost braces; missing escapes or markup?
    28 | \item{pavd}{logical input to include Plant Area Volume Density Plot from {plot_pavd},
       |                                                                          ^
Maintainer: ‘Srihari Jaganathan <sriharitn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Srihari",
                    family = "Jaganathan",
                    role = c("aut", "cre"),
                    email = "sriharitn@gmail.com")
as necessary.
Maintainer: ‘Kevin Kuo <kevin.kuo@rstudio.com>’

Found the following (possibly) invalid file URI:
  URI: .github/CODE_OF_CONDUCT.md
    From: README.md
Found the following HTML validation problems:
certify.html:89:1 (certify.Rd:42): Warning: missing </ul> before </div>
Found the following HTML validation problems:
formattableOutput.html:54:1 (formattableOutput.Rd:14): Warning: missing </ul> before </div>
renderFormattable.html:55:1 (renderFormattable.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
basemethods.html:51:1 (basemethods.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
add.backtick.html:54:1 (add.backtick.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
familias.html:50:1 (familias.Rd:11): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘str_extract_part.R’
Found the following HTML validation problems:
install_fortls_python_deps.html:50:1 (install_fortls_python_deps.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
threshold_peaks.html:76:1 (threshold_peaks.Rd:28): Warning: missing </ul> before </div>
Maintainer: ‘Matthew J. Vavrek <matthew@matthewvavrek.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Matthew", "J."),
                    family = "Vavrek",
                    role = c("aut", "cre"),
                    email = "matthew@matthewvavrek.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
SAtree.html:50:1 (SAtree.Rd:12): Warning: missing </ul> before </div>
summary.taxonomy.html:63:1 (summary.taxonomy.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Milton T Drott <mtd66@cornell.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Milton", "T"),
                    family = "Drott",
                    role = c("aut", "cre"),
                    email = "mtd66@cornell.edu")
as necessary.
checkRd: (-1) FGf.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FGf.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FGf.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FGf.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FGf.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) FourgameteP.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FourgameteP.Rd:38: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Guillermo Basulto-Elias <guillermobasulto@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Guillermo",
                    family = "Basulto-Elias",
                    role = c("aut", "cre"),
                    email = "guillermobasulto@gmail.com")
as necessary.
Maintainer: ‘Steven Andrew Culpepper <sculpepp@illinois.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/fourPNO.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
FieldPlot.html:54:1 (FieldPlot.Rd:14): Warning: missing </ul> before </div>
fbuttons.html:87:1 (fbuttons.Rd:31): Warning: missing </ul> before </div>
painter.html:50:1 (painter.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Salvatore D. Tomarchio <daniele.tomarchio@unict.it>’

The Description field contains
  Tomarchio et al. (2020) <arXiv:2107.04330>.  The matrix-variate normal
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Jinlu Cao <caojinlu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jinlu",
                    family = "Cao",
                    role = c("aut", "cre"),
                    email = "caojinlu@gmail.com")
as necessary.
Maintainer: ‘Salil Koner <salil.koner@duke.edu>’

The Description field contains
  (2023) <arXiv:2302.05612> respectively.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Nan Lin <edmondlinnan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nan",
                      family = "Lin",
                      role = c("aut", "cre"),
                      email = "edmondlinnan@gmail.com"),
               person(given = "Momiao",
                      family = "Xiong",
                      role = "aut"))
as necessary.
Maintainer: ‘S.Sampath <sampath1959@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(family = "S.Sampath",
                    role = c("aut", "cre"),
                    email = "sampath1959@gmail.com")
as necessary.
checkRd: (-1) plot_lines.Rd:66: Lost braces
    66 | moderator. By default it is equal to \8code{c(19, 17, 15, 8, 5, 4, 3, 1)}.}
       |                                            ^
checkRd: (-1) Fpop.Rd:8: Lost braces; missing escapes or markup?
     8 | sum_{i=1}^n (x_i-m_i)^2 + lambda * sum_{i=1}^{n-1} I(m_i !=
       |     ^
checkRd: (-1) Fpop.Rd:8: Lost braces; missing escapes or markup?
     8 | sum_{i=1}^n (x_i-m_i)^2 + lambda * sum_{i=1}^{n-1} I(m_i !=
       |                                        ^
checkRd: (-1) Fpop.Rd:8: Lost braces; missing escapes or markup?
     8 | sum_{i=1}^n (x_i-m_i)^2 + lambda * sum_{i=1}^{n-1} I(m_i !=
       |                                              ^
checkRd: (-1) Fpop.Rd:9: Lost braces; missing escapes or markup?
     9 | m_{i+1}), where the indicator function I counts the number of
       |   ^
Maintainer: ‘Guillem Rigaill <guillem.rigaill@inrae.fr>’

The Description field contains
  <arXiv:1004.0887> algorithm for detecting multiple changepoints in the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
nlminb2Control.html:111:1 (nlminb2Control.Rd:63): Warning: missing </ul> before </div>
Maintainer: ‘Juan J. Serrano-Perez <jjserra@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Patricia",
                      family = "Roman-Roman",
                      role = "aut"),
               person(given = c("Juan", "J."),
                      family = "Serrano-Perez",
                      role = c("aut", "cre"),
                      email = "jjserra@ugr.es"),
               person(given = "Francisco",
                      family = "Torres-Ruiz.",
                      role = "aut"))
as necessary.
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/RobinHankin/frab
which should likely be
  https://github.com/RobinHankin/frab/issues
instead.
Maintainer: ‘Shawn Garbett <Shawn@Garbett.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shawn",
                      family = "Garbett",
                      role = c("aut", "cre"),
                      email = "shawn@garbett.org"),
               person(given = "Darren",
                      family = "Tyson",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘fracprolif-package.Rd’:
    \keyword{ package, quiescence, growth }
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hana",
                      family = "Sevcikova",
                      role = c("aut", "cre"),
                      email = "hanas@uw.edu"),
               person(given = "Don",
                      family = "Percival",
                      role = "aut",
                      email = "dbp@apl.washington.edu"),
               person(given = "Tilmann",
                      family = "Gneiting",
                      role = "aut",
                      email = "tilmann@stat.washington.edu"))
as necessary.
Maintainer: ‘Philipp Hermann <philipp.hermann@jku.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Philipp",
                      family = "Hermann",
                      role = c("aut", "cre"),
                      email = "philipp.hermann@jku.at"),
               person(given = "Jozef",
                      family = "Kiselak",
                      role = "aut"),
               person(given = "Milan",
                      family = "Stehlik",
                      role = "aut"))
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/PhHermann/FractalParameterEstimation
which should likely be
  https://github.com/PhHermann/FractalParameterEstimation/issues
instead.
Maintainer: ‘Bill Venables <bill.venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
Maintainer: ‘OuYang Ming <oula2004@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "OuYang",
                    family = "Ming",
                    role = c("aut", "cre"),
                    email = "oula2004@163.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Giovanny Covarrubias-Pazaran <covarrubiasp@wisc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giovanny",
                      family = "Covarrubias-Pazaran",
                      role = c("aut", "cre"),
                      email = "covarrubiasp@wisc.edu"),
               person(given = "Luis",
                      family = "Diaz-Garcia",
                      role = "aut"),
               person(given = "Brandon",
                      family = "Schlautman",
                      role = "aut"),
               person(given = "Walter",
                      family = "Salazar",
                      role = "aut"),
               person(given = "Juan",
                      family = "Zalapa.",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Theodor Adrian Balan <hello@tbalan.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Theodor", "Adrian"),
                      family = "Balan",
                      role = c("aut", "cre"),
                      email = "hello@tbalan.com"),
               person(given = "Hein",
                      family = "Putter",
                      role = "aut"))
as necessary.
checkRd: (-1) emfrail_control.Rd:49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) emfrail_control.Rd:50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) emfrail_control.Rd:51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) emfrail_control.Rd:52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) emfrail_control.Rd:53-54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) emfrail_control.Rd:55-57: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Maengseok Noh <msnoh@pknu.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Il", "Do"),
                      family = "Ha",
                      role = "aut"),
               person(given = "Maengseok",
                      family = "Noh",
                      role = c("aut", "cre"),
                      email = "msnoh@pknu.ac.kr"),
               person(given = "Jiwoong",
                      family = "Kim",
                      role = "aut"),
               person(given = "Youngjo",
                      family = "Lee",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
CmpRsk.html:53:1 (CmpRsk.Rd:17): Warning: missing </ul> before </div>
frailty.vs.html:90:1 (frailty.vs.Rd:26): Warning: missing </ul> before </div>
hlike.frailty.html:89:1 (hlike.frailty.Rd:31): Warning: missing </ul> before </div>
jmfit.html:65:1 (jmfit.Rd:20): Warning: missing </ul> before </div>
jointmodeling.html:73:1 (jointmodeling.Rd:24): Warning: missing </ul> before </div>
mlmfit.html:67:1 (mlmfit.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.fpen.html:50:1 (plot.fpen.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
RocFun.html:66:1 (RocFun.Rd:20): Warning: missing </ul> before </div>
dnorkernel.html:50:1 (dnorkernel.Rd:12): Warning: missing </ul> before </div>
integ.html:58:1 (integ.Rd:16): Warning: missing </ul> before </div>
muro.html:46:1 (muro.Rd:10): Warning: missing </ul> before </div>
wIQR.html:50:1 (wIQR.Rd:12): Warning: missing </ul> before </div>
wquantile.html:54:1 (wquantile.Rd:14): Warning: missing </ul> before </div>
wvar.html:54:1 (wvar.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘David Molina <dmolinam@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Arcos",
                      role = "aut",
                      email = "arcos@ugr.es"),
               person(given = c("Maria", "del", "Mar"),
                      family = "Rueda",
                      role = "aut",
                      email = "mrueda@ugr.es"),
               person(given = c("Maria", "Giovanna"),
                      family = "Ranalli",
                      role = "aut",
                      email = "giovanna.ranalli@stat.unipg.it"),
               person(given = "David",
                      family = "Molina",
                      role = c("aut", "cre"),
                      email = "dmolinam@ugr.es"))
as necessary.
Maintainer: ‘Gábor Csárdi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gabor",
                      family = "Csardi",
                      role = "aut"),
               person(given = "Titus",
                      family = "Wormer",
                      role = "aut"),
               person(given = "Maciej",
                      family = "Ceglowski",
                      role = "aut"),
               person(given = c("Jacob", "R."),
                      family = "Rideout",
                      role = "aut"),
               person(given = c("and", "Kent", "S."),
                      family = "Johnson",
                      role = "aut"),
               person(given = "Gábor",
                      family = "Csárdi",
                      role = "cre",
                      email = "csardi.gabor@gmail.com"))
as necessary.
Maintainer: ‘Bernhard Pfaff <bernhard@pfaffikus.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) MultiAsset.Rd:26: Escaped LaTeX specials: \&
Maintainer: ‘Guanqiao Ding <gding16@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Guanqiao",
                    family = "Ding",
                    role = c("aut", "cre"),
                    email = "gding16@gmail.com")
as necessary.
Maintainer: ‘Jeonghwa Lee <leejeonghwa5@gmail.com>’

The Description field contains
  distributions. (Lee, J. (2023) <arXiv:2209.01516>.)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:42:1 (inst/NEWS.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Christoph Bergmeir <c.bergmeir@decsai.ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Lala", "Septem"),
                      family = "Riza",
                      role = "aut"),
               person(given = "Christoph",
                      family = "Bergmeir",
                      role = c("aut", "cre"),
                      email = "c.bergmeir@decsai.ugr.es"),
               person(given = "Francisco",
                      family = "Herrera",
                      role = "aut"),
               person(given = c("Jose", "Manuel"),
                      family = "Benitez",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) summary.frbs.Rd:32: Lost braces
    32 |                           \code{"GAUSSIAN"}, code{"TRIANGLE"}, \code{"TRAPEZOID"}, \code{"SIGMOID"}, and \code{"BELL"}.
       |                                                  ^
checkRd: (-1) summary.frbs.Rd:60: Lost braces; missing escapes or markup?
    60 |          {4.0, 0.23, 0.43, 0.53, 0.73} on its column. It means that the label a.2 of variable v.1 
       |          ^
Found the following HTML validation problems:
ANFIS.update.html:74:1 (ANFIS.update.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Philippe Courcoux <philippe.courcoux@oniris-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Philippe",
                    family = "Courcoux",
                    role = c("aut", "cre"),
                    email = "philippe.courcoux@oniris-nantes.fr")
as necessary.
Found the following HTML validation problems:
check.dtype.for.data.html:50:1 (check.dtype.for.data.Rd:12): Warning: missing </ul> before </div>
fileopen.gz.or.not.html:46:1 (fileopen.gz.or.not.Rd:10): Warning: missing </ul> before </div>
fwrite3.html:50:1 (fwrite3.Rd:12): Warning: missing </ul> before </div>
linesplit.fixed.html:63:1 (linesplit.fixed.Rd:21): Warning: missing </ul> before </div>
print.fs.annot.html:51:1 (print.fs.annot.Rd:12): Warning: missing </ul> before </div>
print.fs.label.html:51:1 (print.fs.label.Rd:12): Warning: missing </ul> before </div>
print.fs.patch.html:51:1 (print.fs.patch.Rd:12): Warning: missing </ul> before </div>
print.fs.surface.html:51:1 (print.fs.surface.Rd:12): Warning: missing </ul> before </div>
print.fs.volume.html:51:1 (print.fs.volume.Rd:12): Warning: missing </ul> before </div>
read.element.counts.ply.header.html:46:1 (read.element.counts.ply.header.Rd:10): Warning: missing </ul> before </div>
rotate90.html:54:1 (rotate90.Rd:14): Warning: missing </ul> before </div>
stl.format.file.is.ascii.html:46:1 (stl.format.file.is.ascii.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Athanasse Zafirov <zafirov@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
Maintainer: ‘Kenneth W. Moffett <kmoffet@siue.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thomas",
                      family = "Feldman",
                      role = "aut",
                      email = "tfeldma@siue.edu"),
               person(given = c("Kenneth", "W."),
                      family = "Moffett",
                      role = c("aut", "cre"),
                      email = "kmoffet@siue.edu"))
as necessary.
Maintainer: ‘Kidzinski L. <lukasz.kidzinski@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hormann",
                      family = "S.",
                      role = "aut"),
               person(given = "Kidzinski",
                      family = "L.",
                      role = c("aut", "cre"),
                      email = "lukasz.kidzinski@stanford.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  fts.freqdom.Rd: freqdom
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
'library' or 'require' call not declared from: ‘tseries’
Maintainer: ‘Kidzinski L. <lukasz.kidzinski@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hormann",
                      family = "S.",
                      role = "aut"),
               person(given = "Kidzinski",
                      family = "L.",
                      role = c("aut", "cre"),
                      email = "lukasz.kidzinski@stanford.edu"))
as necessary.
Maintainer: ‘Norm Matloff <normmatloff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Norm",
                      family = "Matloff",
                      role = c("aut", "cre"),
                      email = "normmatloff@gmail.com"),
               person(given = "Yingkang",
                      family = "Xie",
                      role = "aut",
                      email = "yingkang.xie@gmail.com"))
as necessary.
Maintainer: ‘Masaaki Sudo <masaaki@sudori.info>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Annegret Grimm <annegret.grimm@ufz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Annegret", "Grimm", "&", "Klaus"),
                      family = "Henle",
                      role = "aut"),
               person(given = "Annegret",
                      family = "Grimm",
                      role = "cre",
                      email = "annegret.grimm@ufz.de"))
as necessary.
Maintainer: ‘Alistair Wilcox <frequency@alistairwilcox.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alistair",
                    family = "Wilcox",
                    role = c("aut", "cre"),
                    email = "frequency@alistairwilcox.com")
as necessary.
Maintainer: ‘Jose Gerardo Tamez-Pena <jose.tamezpena@tec.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jose", "Gerardo"),
                      family = "Tamez-Pena",
                      role = c("aut", "cre"),
                      email = "jose.tamezpena@tec.mx"),
               person(given = "Antonio",
                      family = "Martinez-Torteya",
                      role = "aut"),
               person(given = "Israel",
                      family = "Alanis",
                      role = "aut"),
               person(given = "Jorge",
                      family = "Orozco",
                      role = "aut"))
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FRESHD.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) maximin.Rd:197: Lost braces
   197 | Meinshausen, N and P. B{u}hlmann (2015). Maximin effects in inhomogeneous large-scale data.
       |                        ^
Found the following HTML validation problems:
use_pretty.html:48:1 (use_pretty.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
pb.html:271:1 (pb.Rd:193): Warning: <h3> anchor "Warning" already defined
'library' or 'require' call not declared from: ‘gridExtra’
Found the following HTML validation problems:
SRE.predict.html:46:1 (SRE.predict.Rd:10): Warning: missing </ul> before </div>
coef_uncertainty.html:64:1 (coef_uncertainty.Rd:21): Warning: missing </ul> before </div>
initialize-manifold-method.html:47:1 (initialize-manifold-method.Rd:10): Warning: missing </ul> before </div>
loglik.html:49:1 (loglik.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Lijun Wang <szcfweiya@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lijun",
                    family = "Wang",
                    role = c("aut", "cre", "cph"),
                    email = "szcfweiya@gmail.com")
as necessary.
Maintainer: ‘Arne Henningsen <arne.henningsen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tim",
                      family = "Coelli",
                      role = "aut"),
               person(given = "Arne",
                      family = "Henningsen",
                      role = c("aut", "cre"),
                      email = "arne.henningsen@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Aidan Lakshman <ahl27@pitt.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/ahl27/froth/issues/new/choose
which should likely be
  https://github.com/ahl27/froth/issues/new/choose/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘as_data_frame.Rd’ ‘as_list.Rd’ ‘dplyr_methods.Rd’ ‘fr_schema.R’
    ‘fr_tdr.R’ ‘read_fr_tdr.R’ ‘update_field.R’ ‘update_field.Rd’
Maintainer: ‘Carlos Miranda <carlos.miranda@unavarra.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carlos",
                    family = "Miranda",
                    role = c("aut", "cre"),
                    email = "carlos.miranda@unavarra.es")
as necessary.
Found the following HTML validation problems:
FSA-defunct.html:72:1 (FSA-defunct.Rd:50): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:218:1 (inst/NEWS.Rd:89): Warning: missing </ul> before </div>
NEWS.html:54:1 (inst/NEWS.Rd:21): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:72:1 (inst/NEWS.Rd:29): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:89:1 (inst/NEWS.Rd:38): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:106:1 (inst/NEWS.Rd:45): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:127:1 (inst/NEWS.Rd:54): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:147:1 (inst/NEWS.Rd:62): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:165:1 (inst/NEWS.Rd:70): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:192:1 (inst/NEWS.Rd:81): Warning: <h4> anchor "NEW-FEATURES" already defined
Maintainer: ‘Lars Kotthoff <larsko@uwyo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Piotr",
                      family = "Romanski",
                      role = "aut"),
               person(given = "Lars",
                      family = "Kotthoff",
                      role = c("aut", "cre"),
                      email = "larsko@uwyo.edu"),
               person(given = "Patrick",
                      family = "Schratz",
                      role = "aut"))
as necessary.
checkRd: (-1) FSelector-package.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FSelector-package.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FSelector-package.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) FSelector-package.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) relief.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) relief.Rd:22: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Michela Battauz <michela.battauz@uniud.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michela",
                    family = "Battauz",
                    role = c("aut", "cre"),
                    email = "michela.battauz@uniud.it")
as necessary.
checkRd: (-1) report.Rd:18: Lost braces; missing escapes or markup?
    18 |         \item{las}{numeric in {0,1,2,3}; the style of axis labels (see \code{\link{par}}).}
       |                               ^
Maintainer: ‘Rajen D. Shah <r.shah@statslab.cam.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Hyun", "Jik"),
                      family = "Kim",
                      role = "aut"),
               person(given = c("Rajen", "D."),
                      family = "Shah",
                      role = c("aut", "cre"),
                      email = "r.shah@statslab.cam.ac.uk"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
dir_tree.html:76:1 (dir_tree.Rd:27): Warning: missing </ul> before </div>
file_chown.html:56:1 (file_chown.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Felix Schönbrodt <felix@nicebread.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Felix",
                      family = "Schönbrodt",
                      role = c("aut", "cre"),
                      email = "felix@nicebread.de"),
               person(given = "Lara",
                      family = "Stas",
                      role = "aut"),
               person(given = "Tom",
                      family = "Loeys",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:385:1 (inst/NEWS.Rd:202): Warning: missing </ul> before </div>
NEWS.html:40:1 (inst/NEWS.Rd:18): Warning: <h4> anchor "Changes" already defined
NEWS.html:55:1 (inst/NEWS.Rd:27): Warning: <h4> anchor "Changes" already defined
NEWS.html:70:1 (inst/NEWS.Rd:37): Warning: <h4> anchor "Changes" already defined
NEWS.html:94:1 (inst/NEWS.Rd:50): Warning: <h4> anchor "Changes" already defined
NEWS.html:109:1 (inst/NEWS.Rd:60): Warning: <h4> anchor "Changes" already defined
NEWS.html:136:1 (inst/NEWS.Rd:74): Warning: <h4> anchor "Changes" already defined
NEWS.html:169:1 (inst/NEWS.Rd:89): Warning: <h4> anchor "Changes" already defined
NEWS.html:187:1 (inst/NEWS.Rd:99): Warning: <h4> anchor "Changes" already defined
NEWS.html:205:1 (inst/NEWS.Rd:109): Warning: <h4> anchor "Changes" already defined
NEWS.html:223:1 (inst/NEWS.Rd:120): Warning: <h4> anchor "Changes" already defined
NEWS.html:262:1 (inst/NEWS.Rd:143): Warning: <h4> anchor "New-Features" already defined
NEWS.html:304:1 (inst/NEWS.Rd:164): Warning: <h4> anchor "New-Features" already defined
NEWS.html:321:1 (inst/NEWS.Rd:174): Warning: <h4> anchor "New-Features" already defined
NEWS.html:345:1 (inst/NEWS.Rd:187): Warning: <h4> anchor "New-Features" already defined
NEWS.html:362:1 (inst/NEWS.Rd:195): Warning: <h4> anchor "Changes" already defined
Found the following HTML validation problems:
equalMeans.html:50:1 (equalMeans.Rd:12): Warning: missing </ul> before </div>
mod.html:50:1 (mod.Rd:12): Warning: missing </ul> before </div>
predict.fSRM.html:55:1 (predict.fSRM.Rd:14): Warning: missing </ul> before </div>
update.fSRM.html:55:1 (update.fSRM.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Xin Zhou <xxz220@miami.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xin",
                      family = "Zhou",
                      role = c("aut", "cre"),
                      email = "xxz220@miami.edu"),
               person(given = "Xiaodong",
                      family = "Cai",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
FDR.html:54:1 (FDR.Rd:14): Warning: missing </ul> before </div>
TPR.html:54:1 (TPR.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Nicolas Ewen <nicolas.ewen.math@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nicolas",
                    family = "Ewen",
                    role = c("aut", "cre"),
                    email = "nicolas.ewen.math@gmail.com")
as necessary.
Maintainer: ‘Sarah P. Flanagan <spflanagan.phd@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sarah", "P."),
                      family = "Flanagan",
                      role = c("aut", "cre"),
                      email = "spflanagan.phd@gmail.com"),
               person(given = c("Adam", "G."),
                      family = "Jones",
                      role = "aut"))
as necessary.
Maintainer: ‘Zihuai He <zihuai@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zihuai",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "zihuai@umich.edu")
as necessary.
Found the following HTML validation problems:
compress_fst.html:61:1 (compress_fst.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Mikkel Freltoft Krogsholm <mikkel@56n.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mikkel", "Freltoft"),
                    family = "Krogsholm",
                    role = c("aut", "cre"),
                    email = "mikkel@56n.dk")
as necessary.
Found the following HTML validation problems:
null_to_na.html:46:1 (null_to_na.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Tobias Setz <tobias.setz@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Diethelm",
                      family = "Wuertz",
                      role = "aut"),
               person(given = "Tobias",
                      family = "Setz",
                      role = "cre",
                      email = "tobias.setz@live.com"),
               person(given = "Yohan",
                      family = "Chalabi",
                      role = "ctb"))
as necessary.
Maintainer: ‘Sare Amerifar <sare.ameri.01@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sare",
                    family = "Amerifar",
                    role = c("aut", "cre"),
                    email = "sare.ameri.01@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘utility_fSACF.R’
checkRd: (-1) Spec_compare_localize_freq.Rd:49: Escaped LaTeX specials: \&
checkRd: (-1) Spec_compare_localize_freq.Rd:52: Escaped LaTeX specials: \&
Found the following HTML validation problems:
Epanechnikov_kernel.html:46:1 (Epanechnikov_kernel.Rd:10): Warning: missing </ul> before </div>
Get_noise_sd.html:50:1 (Get_noise_sd.Rd:12): Warning: missing </ul> before </div>
Marginal_basis_pval.html:64:1 (Marginal_basis_pval.Rd:20): Warning: missing </ul> before </div>
plot.SampleSpec.html:51:1 (plot.SampleSpec.Rd:12): Warning: missing </ul> before </div>
plot.SampleSpecDiffFreqCurvelength.html:55:1 (plot.SampleSpecDiffFreqCurvelength.Rd:14): Warning: missing </ul> before </div>
plot.SpecMA.html:51:1 (plot.SpecMA.Rd:12): Warning: missing </ul> before </div>
print.SampleSpecDiffFreqCurvelength.html:51:1 (print.SampleSpecDiffFreqCurvelength.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘combine_fude.R’ ‘extract_fude.R’ ‘get_boundary.R’ ‘ls_fude.R’
    ‘read_fude.R’ ‘rename_fude.Rd’
Maintainer: ‘Jiangtao Gou <gouRpackage@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiangtao",
                      family = "Gou",
                      role = c("aut", "cre"),
                      email = "gourpackage@gmail.com"),
               person(given = "Fengqing",
                      family = "Zhang",
                      role = "aut",
                      comment = "Zoe"))
as necessary.
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xinran",
                      family = "Li",
                      role = "aut"),
               person(given = c("Paul", "R."),
                      family = "Rosenbaum",
                      role = c("aut", "cre"),
                      email = "rosenbaum@wharton.upenn.edu"))
as necessary.
Found the following HTML validation problems:
yes_no.html:60:1 (yes_no.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Aimee Lee Houde <aimee.lee.houde@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Aimee", "Lee"),
                      family = "Houde",
                      role = c("aut", "cre"),
                      email = "aimee.lee.houde@gmail.com"),
               person(given = "Trevor",
                      family = "Pitcher",
                      role = "aut"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Paula Weidemueller [aut, cre, cph] (<https://orcid.org/0000-0003-3867-3131>, @PaulaH_W), Constantin Ahlmann-Eltze [aut] (<https://orcid.org/0000-0002-3762-068X>, @const_ae)’
  Authors@R: ‘Paula Weidemueller [aut, cre, cph] (ORCID: <https://orcid.org/0000-0003-3867-3131>, Twitter: @PaulaH_W), Constantin Ahlmann-Eltze [aut] (ORCID: <https://orcid.org/0000-0002-3762-068X>, Twitter: @const_ae)’

  Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘find_connected_components.R’
Maintainer: ‘Bryan A. Hanson <hanson@depauw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Bryan", "A.", "Hanson", "DePauw"),
                      family = "University",
                      role = "aut"),
               person(given = c("Greencastle", "Indiana"),
                      family = "USA",
                      role = "aut"),
               person(given = c("Bryan", "A."),
                      family = "Hanson",
                      role = "cre",
                      email = "hanson@depauw.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Barinder Thind <barinder.thi@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  discussion found in Thind, Multani and Cao (2020) <arXiv:2006.09590>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Peter Danenberg <pcd@roxygen.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Danenberg",
                    role = c("aut", "cre"),
                    email = "pcd@roxygen.org")
as necessary.
Malformed Description field: should contain one or more complete sentences.
Found the following HTML validation problems:
dot-scalarProduct.html:50:1 (dot-scalarProduct.Rd:12): Warning: missing </ul> before </div>
print.funData.html:48:1 (print.funData.Rd:10): Warning: missing </ul> before </div>
print.irregFunData.html:48:1 (print.irregFunData.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Charles Bouveyron <charles.bouveyron@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Charles",
                    family = "Bouveyron",
                    role = c("aut", "cre"),
                    email = "charles.bouveyron@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Ravgr.Rd’ ‘TaylorRussell.Rd’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  promaxQ.Rd: GPForth
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
obj_func.html:116:1 (obj_func.Rd:56): Warning: missing </ul> before </div>
Maintainer: ‘Charles Bouveyron <charles.bouveyron@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Charles",
                      family = "Bouveyron",
                      role = c("aut", "cre"),
                      email = "charles.bouveyron@gmail.com"),
               person(given = "Julien",
                      family = "Jacques",
                      role = "aut"),
               person(given = "Amandine",
                      family = "Schmutz",
                      role = "aut"))
as necessary.
checkRd: (-1) plot.fd.Rd:69-71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.fd.Rd:72-77: Lost braces in \itemize; meant \describe ?
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.fd.Rd: lines.fd, plotfit.fd
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘John J. Dziak <dziakj1@gmail.com>’

The Description field contains
  Piper & Li (2021) <arXiv:2112.03960>. The model is similar to that of
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following significant warnings:
  SobolDiss.cpp:16:17: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  probKMAImpl.cpp:749:28: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/funMoDisco.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Found the following HTML validation problems:
after_join_all.html:70:1 (after_join_all.Rd:24): Warning: missing </ul> before </div>
distinct_events.html:58:1 (distinct_events.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
limits.html:46:1 (limits.Rd:10): Warning: missing </ul> before </div>
outliers.html:46:1 (outliers.Rd:10): Warning: missing </ul> before </div>
phi.html:46:1 (phi.Rd:10): Warning: missing </ul> before </div>
source_data.html:46:1 (source_data.Rd:10): Warning: missing </ul> before </div>
tau2.html:46:1 (tau2.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Matthew Kumar <mattkumar@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Kumar",
                    role = c("aut", "cre"),
                    email = "mattkumar@gmail.com")
as necessary.

Found the following (possibly) invalid file URI:
  URI: www.ncbi.nlm.nih.gov/pubmed/15568194
    From: inst/doc/introduction.html
'library' or 'require' calls not declared from:
  ‘rgl’ ‘tuneR’
Found the following HTML validation problems:
plot.funeigen.html:76:1 (plot.funeigen.Rd:25): Warning: missing </ul> before </div>
plot.funreg.html:69:1 (plot.funreg.Rd:26): Warning: missing </ul> before </div>
print.funreg.html:62:1 (print.funreg.Rd:19): Warning: missing </ul> before </div>
Found the following HTML validation problems:
render_funr.html:51:1 (render_funr.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Andre Rehage <rehage@statistik.tu-dortmund.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andre",
                    family = "Rehage",
                    role = c("aut", "cre"),
                    email = "rehage@statistik.tu-dortmund.de")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘FUNTA-package.Rd’:
    \keyword{ package
      classif
      robust}
Found the following HTML validation problems:
to_latex.html:93:1 (to_latex.Rd:39): Warning: missing </ul> before </div>
Maintainer: ‘Frank Dondelinger <fdondelinger.work@gmail.com>’

The Description field contains
  in detail in Dondelinger and Mukherjee (2017) <arXiv:1611.00953>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
fusionMultiPlot-shiny.html:68:1 (fusionMultiPlot-shiny.Rd:25): Warning: missing </ul> before </div>
fusionPlotOutput.html:68:1 (fusionPlotOutput.Rd:24): Warning: missing </ul> before </div>
Maintainer: ‘Yuan Zhong <aqua.zhong@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xin",
                      family = "Gao",
                      role = "aut"),
               person(given = "Yuan",
                      family = "Zhong",
                      role = c("aut", "cre"),
                      email = "aqua.zhong@gmail.com"),
               person(given = c("Raymond", "J."),
                      family = "Carroll",
                      role = "aut"))
as necessary.

The Description field contains
  Raymond J. Carroll (2017) <arXiv:1610.00667v1>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Brian Lee Yung Rowe <r@zatonovo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Brian", "Lee", "Yung"),
                    family = "Rowe",
                    role = c("aut", "cre"),
                    email = "r@zatonovo.com")
as necessary.
Maintainer: ‘Brian Lee Yung Rowe <r@zatonovo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Brian", "Lee", "Yung"),
                    family = "Rowe",
                    role = c("aut", "cre"),
                    email = "r@zatonovo.com")
as necessary.
Found the following files/directories:
  ‘completeTrial_byArm_eventPriorRateC3=0.001_eventPriorRateT1=0_eventPriorRateT2=0_eventPriorWt=0.5.RData’
  ‘completeTrial_byArm_eventPriorRateC3=0.06_eventPriorRateT1=0.03_eventPriorRateT2=0.03_eventPriorWt=0.2.RData’
  ‘completeTrial_byArm_eventPriorRateC3=0.06_eventPriorRateT1=0.03_eventPriorRateT2=0.03_eventPriorWt=0.4.RData’
  ‘completeTrial_byArm_eventPriorRateC3=0.06_eventPriorRateT1=0.03_eventPriorRateT2=0.03_eventPriorWt=0.6.RData’
  ‘completeTrial_pooled_eventPriorRate=0.001_eventPriorWt=0.5.RData’
  ‘completeTrial_pooled_eventPriorRate=0.06_eventPriorWt=0.2.RData’
  ‘completeTrial_pooled_eventPriorRate=0.06_eventPriorWt=0.4.RData’
  ‘completeTrial_pooled_eventPriorRate=0.06_eventPriorWt=0.6.RData’
  ‘rcdf_byArm_arm=T1_eventPriorRateC3=0.06_eventPriorRateT1=0.03_eventPriorRateT2=0.03.pdf’
  ‘rcdf_pooled_eventPriorRate=0.06.pdf’
Found the following HTML validation problems:
BatchtoolsFutureError.html:46:1 (BatchtoolsFutureError.Rd:10): Warning: missing </ul> before </div>
grapes-resources-grapes.html:53:1 (grapes-resources-grapes.Rd:15): Warning: missing </ul> before </div>
print.BatchtoolsFuture.html:51:1 (print.BatchtoolsFuture.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
CallrFutureError.html:46:1 (CallrFutureError.Rd:10): Warning: missing </ul> before </div>
print.CallrFuture.html:51:1 (print.CallrFuture.Rd:12): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Fuzzy_DBScan.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
Fuzzy_DBScan.html:178:1 (Fuzzy_DBScan.Rd:147): Warning: <h5> anchor "Usage" already defined
Fuzzy_DBScan.html:184:1 (Fuzzy_DBScan.Rd:151): Warning: <h5> anchor "Arguments" already defined
Fuzzy_DBScan.html:223:1 (Fuzzy_DBScan.Rd:180): Warning: <h5> anchor "Usage" already defined
Fuzzy_DBScan.html:229:1 (Fuzzy_DBScan.Rd:184): Warning: <h5> anchor "Arguments" already defined
Fuzzy_DBScan.html:256:1 (Fuzzy_DBScan.Rd:201): Warning: <h5> anchor "Usage" already defined
Fuzzy_DBScan.html:262:1 (Fuzzy_DBScan.Rd:205): Warning: <h5> anchor "Arguments" already defined
Found the following HTML validation problems:
summary.impTest.html:51:1 (summary.impTest.Rd:12): Warning: missing </ul> before </div>
summary.metComp.html:51:1 (summary.metComp.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Alina Petukhova <petukhova.alina@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alina",
                    family = "Petukhova",
                    role = c("aut", "cre"),
                    email = "petukhova.alina@gmail.com")
as necessary.
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Maintainer: ‘Marek Gagolewski <marek@gagolewski.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) trapezoidalApproximation-methods.Rd:49: Lost braces; missing escapes or markup?
    49 | For example, if Val(A) < EV_{1/3}(A) or Val(A) > EV_{2/3}(A),
       |                             ^
checkRd: (-1) trapezoidalApproximation-methods.Rd:49: Lost braces; missing escapes or markup?
    49 | For example, if Val(A) < EV_{1/3}(A) or Val(A) > EV_{2/3}(A),
       |                                                     ^
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Maintainer: ‘Charles J. Geyer <charlie@stat.umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Charles", "J."),
                    family = "Geyer",
                    role = c("aut", "cre"),
                    email = "charlie@stat.umn.edu")
as necessary.
checkRd: (-1) genmf.Rd:26: Lost braces; missing escapes or markup?
    26 | \item 'gbellmf' is c(\code{a, b, c}), where \code{a} denotes the width, \code{b} is usually positive and {c} locates the center of the curve.
       |                                                                                                          ^
Found the following HTML validation problems:
writefis.html:50:1 (writefis.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Asun Lubiano <lubiano@uniovi.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Asun",
                      family = "Lubiano",
                      role = c("aut", "cre"),
                      email = "lubiano@uniovi.es"),
               person(given = c("Sara", "de", "la", "Rosa"),
                      family = "de Saa",
                      role = "aut",
                      email = "rosasara@uniovi.es"))
as necessary.
Maintainer: ‘Mikkel Meyer Andersen <mikl@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mikkel", "Meyer"),
                      family = "Andersen",
                      role = c("aut", "cre"),
                      email = "mikl@math.aau.dk"),
               person(given = c("Poul", "Svante"),
                      family = "Eriksen",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
'::' or ':::' import not declared from: ‘here’
'library' or 'require' calls not declared from:
  ‘dplyr’ ‘here’ ‘scales’ ‘tidyverse’
Maintainer: ‘Achim Zeileis <Achim.Zeileis@R-project.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘confint.fxregimes.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
  File ‘fxlm.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
  File ‘fxmonitor.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
  File ‘fxregimes.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
  File ‘fxreturns.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
  File ‘fxtools.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.12.005
Found the following HTML validation problems:
next_fy.html:53:1 (next_fy.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Regis K. Gallon <reg.gallon@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Regis", "K."),
                      family = "Gallon",
                      role = c("aut", "cre"),
                      email = "reg.gallon@gmail.com",
                      comment = "MNHN"),
               person(given = "Jerome",
                      family = "Fournier",
                      role = "aut",
                      comment = c(ROR = "CNRS|MNHN")))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Farimah Houshmand Nanehkaran <hoshmandcomputer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Farimah", "Houshmand"),
                      family = "Nanehkaran",
                      role = c("aut", "cre"),
                      email = "hoshmandcomputer@gmail.com"),
               person(given = c("Seyed", "Mohammad", "Reza"),
                      family = "Lajevardi",
                      role = "aut",
                      email = "R.Lajevardi@iaukashan.ac.ir"),
               person(given = c("Mahmoud", "Mahlouji"),
                      family = "Bidgholi",
                      role = "aut",
                      email = "m.mahlouji@iaukashan.ac.ir"))
as necessary.
Maintainer: ‘Magali Champion <magali.champion@parisdescartes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Magali",
                      family = "Champion",
                      role = c("aut", "cre"),
                      email = "magali.champion@parisdescartes.fr"),
               person(given = "Victor",
                      family = "Picheny",
                      role = "aut"),
               person(given = "Matthieu",
                      family = "Vignes",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
likelihood_tagging_ckmr.html:100:1 (likelihood_tagging_ckmr.Rd:54): Warning: <h4> anchor "obs_data" already defined
run_tmb.html:211:1 (run_tmb.Rd:130): Warning: <h4> anchor "g3_tmb_adfun" already defined
run_tmb.html:217:1 (run_tmb.Rd:131): Warning: <h4> anchor "g3_tmb_fn" already defined
Maintainer: ‘Telford Tendys <gafit@lnx-bsp.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Telford",
                    family = "Tendys",
                    role = c("aut", "cre"),
                    email = "gafit@lnx-bsp.net")
as necessary.
File ‘gafit/libs/gafit.so’:
  Found non-API calls to R: ‘FRAME’, ‘HASHTAB’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Bin Wang <eatingbeen@hotmail.com>’

The Description field contains
  and Jianhua Guo (2022) <arXiv:1911.00658>.  This paper provides the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
data.html:58:1 (data.Rd:17): Warning: missing </ul> before </div>
checkRd: (-1) min_hpd_inc_area_df.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) min_hpd_inc_area_df.Rd:21-22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) min_hpd_inc_area_df.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vza_mean_and_var_rasters.Rd:20: Lost braces
    20 | of the paper on Wilson's warbler, this function computes $tilde{T}^{(mu)}$ (returned as
       |                                                                ^
checkRd: (-1) vza_mean_and_var_rasters.Rd:20: Lost braces; missing escapes or markup?
    20 | of the paper on Wilson's warbler, this function computes $tilde{T}^{(mu)}$ (returned as
       |                                                                    ^
checkRd: (-1) vza_mean_and_var_rasters.Rd:21: Lost braces; missing escapes or markup?
    21 | list component \code{mean.raster}) and $R^{(sigma^2)}$ (returned as list component
       |                                           ^
Found the following HTML validation problems:
hpd_cumul.html:46:1 (hpd_cumul.Rd:10): Warning: missing </ul> before </div>
min_hpd_inclusion_area.html:58:1 (min_hpd_inclusion_area.Rd:14): Warning: missing </ul> before </div>
private_rescale.html:61:1 (private_rescale.Rd:15): Warning: missing </ul> before </div>
vza_mean_and_var_rasters.html:57:1 (vza_mean_and_var_rasters.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Hoon Hwangbo <hhwangb1@utk.edu>’

The Description field contains
  Hwangbo, Y. Ding, and D. Cabezon (2019) <arXiv:1906.05776>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Craig A. Rolling <craig.rolling@slu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Craig", "A."),
                    family = "Rolling",
                    role = c("aut", "cre"),
                    email = "craig.rolling@slu.edu")
as necessary.
Maintainer: ‘Yao Lin <zaiyaolin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tzu-Yao",
                      family = "Lin",
                      role = "aut"),
               person(given = "Yao",
                      family = "Lin",
                      role = "cre",
                      email = "zaiyaolin@gmail.com"))
as necessary.
Found the following HTML validation problems:
count.data_request.html:64:1 (count.data_request.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
autoStopCluster.html:46:1 (autoStopCluster.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mehmet Hakan Satman <mhsatman@istanbul.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mehmet", "Hakan"),
                    family = "Satman",
                    role = c("aut", "cre"),
                    email = "mhsatman@istanbul.edu.tr")
as necessary.
Maintainer: ‘Simon Wood <simon.wood@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Wood",
                    role = c("aut", "cre"),
                    email = "simon.wood@r-project.org")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Thomas Matthews <txm676@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Holger Reulen <hreulen@uni-goettingen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Holger",
                    family = "Reulen",
                    role = c("aut", "cre"),
                    email = "hreulen@uni-goettingen.de")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gamboostMSM-package.Rd: mboost
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Koen W. De Bock <kdebock@audencia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Koen", "W."),
                      family = "De Bock",
                      role = c("aut", "cre"),
                      email = "kdebock@audencia.com"),
               person(given = "Kristof",
                      family = "Coussement",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Maintainer: ‘Sebastian Cano-Berlanga <cano.berlanga@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sebastian",
                    family = "Cano-Berlanga",
                    role = c("aut", "cre"),
                    email = "cano.berlanga@gmail.com")
as necessary.
Found the following HTML validation problems:
summary.ClaimsRule.html:53:1 (summary.ClaimsRule.Rd:15): Warning: missing </ul> before </div>
summary.ClaimsRules.html:53:1 (summary.ClaimsRules.Rd:16): Warning: missing </ul> before </div>
summary.Game.html:53:1 (summary.Game.Rd:17): Warning: missing </ul> before </div>
summary.Nucleolus.html:53:1 (summary.Nucleolus.Rd:16): Warning: missing </ul> before </div>
summary.ShapleyShubik.html:53:1 (summary.ShapleyShubik.Rd:17): Warning: missing </ul> before </div>
summary.ShapleyValue.html:53:1 (summary.ShapleyValue.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Matt Taddy <mataddy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matt",
                    family = "Taddy",
                    role = c("aut", "cre"),
                    email = "mataddy@gmail.com")
as necessary.

The Description field contains
  Paths for Concave Regularization', <arXiv:1308.5623>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) naref.Rd:13: Lost braces
    13 | \details{ For every \code{factor} or \code{character} column in \code{x}, \code{naref} sets \code{NA} as the reference level for a \code{factor} variable. Columns coded as \code{character} class are first converted to factors via \R{factor(x)}.  If \code{impute=TRUE} then the numeric columns are converted to two columns, one appended \code{.x} that contains imputed values and another appended \code{.miss} which is a binary variable indicating whether the original value was missing.  Numeric columns are returned without change if \code{impute=FALSE} or if they do not contain any missing values.  
       |                                                                                                                                                                                                                                         ^
Maintainer: ‘Abu Hossain <a.hossain@londonmet.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Abu",
                      family = "Hossain",
                      role = c("aut", "cre"),
                      email = "a.hossain@londonmet.ac.uk"),
               person(given = "Robert",
                      family = "Rigby",
                      role = "aut"),
               person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = "aut"))
as necessary.
Maintainer: ‘Mikis Stasinopoulos <d.stasinopoulos@gre.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = c("aut", "cre"),
                      email = "d.stasinopoulos@gre.ac.uk"),
               person(given = "Bob",
                      family = "Rigby",
                      role = "aut"),
               person(given = "Nicoleta",
                      family = "Mortan",
                      role = "aut"),
               person(given = "Alexander",
                      family = "Seipp",
                      role = "aut"))
as necessary.
Maintainer: ‘Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = c("aut", "cre"),
                      email = "d.stasinopoulos@londonmet.ac.uk"),
               person(given = "Bob",
                      family = "Rigby",
                      role = "aut",
                      email = "r.rigby@londonmet.ac.uk"),
               person(given = "Paul",
                      family = "Eilers",
                      role = "aut",
                      email = "p.eilers@erasmusmc.nl"),
               person(given = c("Brian", "Marx"),
                      family = "\\email{bmarx@LSU.EDU}",
                      role = "aut"),
               person(given = c("Konstantinos", "Pateras", "with", "contributions", "from", "Larisa"),
                      family = "Kosidou.",
                      role = "aut",
                      email = "kostas.pateras@gmail.com"))
as necessary.
Maintainer: ‘Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = c("aut", "cre", "cph"),
                      email = "d.stasinopoulos@londonmet.ac.uk"),
               person(given = "Bob",
                      family = "Rigby",
                      role = "aut"),
               person(given = "Fernanda",
                      family = "De Bastiani",
                      role = "aut"))
as necessary.
checkRd: (-1) pc.Rd:17: Lost braces
    17 | The functions \code{gamlss.pcr()} and \code{gamlss.pc()} are supporting functions. The  are not intended to be called directly by users. The function \code{gamlss.pc()} is using the linear model function \code{lm()} to fit the first principal components while the function code{gamlss.pcr()} uses \code{fitPCR()}.
       |                                                                                                                                                                                                                                                                                      ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Bucket_plot.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  family_pdf.Rd: gamlss
  fitted_cdf.Rd: gamlss
  fitted_devianceIncr.Rd: gamlss
  model_pca.Rd: gamlss
  resid_plot.Rd: gamlss, plot.gamlss
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mikis Stasinopoulos <d.stasinopoulos@gre.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = c("aut", "cre"),
                      email = "d.stasinopoulos@gre.ac.uk"),
               person(given = "Bob",
                      family = "Rigby",
                      role = "aut",
                      email = "r.rigby@gre.ac.uk"))
as necessary.
Maintainer: ‘Mikis Stasinopoulos <d.stasinopoulos@gre.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mikis",
                      family = "Stasinopoulos",
                      role = c("aut", "cre"),
                      email = "d.stasinopoulos@gre.ac.uk"),
               person(given = "Bob",
                      family = "Rigby",
                      role = "aut",
                      email = "r.rigby@gre.ac.uk"))
as necessary.
Maintainer: ‘Martha Corrales <martha.corrales@usa.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martha",
                      family = "Corrales",
                      role = c("aut", "cre"),
                      email = "martha.corrales@usa.edu.co"),
               person(given = "Edilberto",
                      family = "Cepeda-Cuervo",
                      role = "aut"),
               person(given = c("with", "the", "colaboration", "of", "Margarita"),
                      family = "Marin",
                      role = "aut"),
               person(given = c("Maria", "Fernanda"),
                      family = "Zarate",
                      role = "aut"),
               person(given = "Ricardo",
                      family = "Duplat",
                      role = "aut"),
               person(given = c("Campo", "Elias"),
                      family = "Pardo.",
                      role = "aut"))
as necessary.
Maintainer: ‘Takayuki Kawashima <t-kawa@ism.ac.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Takayuki",
                    family = "Kawashima",
                    role = c("aut", "cre"),
                    email = "t-kawa@ism.ac.jp")
as necessary.
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Wangjian",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Maintainer: ‘Werner Mueller <werner.mueller5@chello.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Werner",
                    family = "Mueller",
                    role = c("aut", "cre"),
                    email = "werner.mueller5@chello.at")
as necessary.
Maintainer: ‘Zhaoyuan Fang <fangzhaoyuan@sibs.ac.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhaoyuan",
                      family = "Fang",
                      role = c("aut", "cre"),
                      email = "fangzhaoyuan@sibs.ac.cn"),
               person(given = "Weidong",
                      family = "Tian",
                      role = "aut"),
               person(given = "Hongbin",
                      family = "Ji",
                      role = "aut"))
as necessary.
Maintainer: ‘Zhaoyuan Fang <fangzhaoyuan@sibs.ac.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhaoyuan",
                      family = "Fang",
                      role = c("aut", "cre"),
                      email = "fangzhaoyuan@sibs.ac.cn"),
               person(given = "Weidong",
                      family = "Tian",
                      role = "aut"),
               person(given = "Hongbin",
                      family = "Ji",
                      role = "aut"))
as necessary.
Maintainer: ‘F.J. Martinez-de-Pison <fjmartin@unirioja.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "F.J.",
                    family = "Martinez-de-Pison",
                    role = c("aut", "cre"),
                    email = "fjmartin@unirioja.es")
as necessary.
Maintainer: ‘Ian Lundberg <ianlundberg@ucla.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Florian Gerber <flora.fauna.gerber@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) Gapfill.Rd:66-68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:69-70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:71-77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Gapfill.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ndvi.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ndvi.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ndvi.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) ndvi.Rd:13: Lost braces in \itemize; meant \describe ?
Running ‘run-all.R’ [13s/15s]
Running the tests in ‘tests/run-all.R’ failed.
Complete output:
  > library(testthat)
  > test_check('gapfill')
  Loading required package: gapfill
  Loading required package: ggplot2
  --> See ?Gapfill and https://doi.org/10.1109/TGRS.2017.2785240 <--
  [ FAIL 5 | WARN 6 | SKIP 0 | PASS 870 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-Image.R:5:4'): Image ─────────────────────────────────────────
  class(Image(ndvi)) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-Image.R:6:4'): Image ─────────────────────────────────────────
  class(Image(ndvi[, , , 1])) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-Image.R:7:4'): Image ─────────────────────────────────────────
  class(Image(ndvi[, , 1, 1])) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-Image.R:10:4'): Image ────────────────────────────────────────
  class(Image(unname(ndvi))) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-Image.R:11:4'): Image ────────────────────────────────────────
  class(Image(ndvi, zlim = c(1, 2))) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  
  [ FAIL 5 | WARN 6 | SKIP 0 | PASS 870 ]
  Error: Test failures
  Execution halted
Found the following HTML validation problems:
ReadGRM.html:46:1 (ReadGRM.Rd:10): Warning: missing </ul> before </div>
WriteGRM.html:58:1 (WriteGRM.Rd:16): Warning: missing </ul> before </div>
WriteGRMBin.html:62:1 (WriteGRMBin.Rd:18): Warning: missing </ul> before </div>
a2g.html:50:1 (a2g.Rd:12): Warning: missing </ul> before </div>
allele.recode.html:54:1 (allele.recode.Rd:14): Warning: missing </ul> before </div>
g2a.html:46:1 (g2a.Rd:10): Warning: missing </ul> before </div>
geno.recode.html:50:1 (geno.recode.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Xinyu Song <song.xinyu@mail.shufe.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xinyu",
                    family = "Song",
                    role = c("aut", "cre"),
                    email = "song.xinyu@mail.shufe.edu.cn")
as necessary.
Maintainer: ‘Sanjeev Sariya <sanjeevsariya@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Qingsheng Huang <huangqqss@126.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Qingsheng",
                    family = "Huang",
                    role = c("aut", "cre"),
                    email = "huangqqss@126.com")
as necessary.
checkRd: (-1) read.ctable.Rd:19: Lost braces; missing escapes or markup?
    19 | a integer scalar which is the index ({icol,irow}) of {row,col}-header
       |                                      ^
checkRd: (-1) read.ctable.Rd:19: Lost braces; missing escapes or markup?
    19 | a integer scalar which is the index ({icol,irow}) of {row,col}-header
       |                                                      ^
checkRd: (-1) read.ctable.Rd:29: Lost braces; missing escapes or markup?
    29 | output array, {row,col}.names are not necessary \code{dimnames[[1]]} and
       |               ^
Found the following HTML validation problems:
aperm.garray.html:58:1 (aperm.garray.Rd:14): Warning: missing </ul> before </div>
as.data.frame.garray.html:58:1 (as.data.frame.garray.Rd:16): Warning: missing </ul> before </div>
margins.html:65:1 (margins.Rd:23): Warning: missing </ul> before </div>
print.garray.html:51:1 (print.garray.Rd:12): Warning: missing </ul> before </div>
psummary.html:59:1 (psummary.Rd:17): Warning: missing </ul> before </div>
read.ctable.html:91:1 (read.ctable.Rd:36): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Danny Tholen [aut, cre] (<https://orcid.org/0000-0002-9517-0939>, University of Natural Resources and Life Sciences, Vienna)’
  Authors@R: ‘Danny Tholen [aut, cre] (ORCID: <https://orcid.org/0000-0002-9517-0939>, affiliation: University of Natural Resources and Life Sciences, Vienna)’
Found the following HTML validation problems:
evaluate-methods.html:83:1 (evaluate-methods.Rd:35): Warning: missing </ul> before </div>
getEvalFun-methods.html:63:1 (getEvalFun-methods.Rd:25): Warning: missing </ul> before </div>
validData-methods.html:62:1 (validData-methods.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Fabien Navarro <fabien.navarro@math.cnrs.fr>’

The Description field contains
  (2019) <arxiv:1906.01882>.  The package also provides an interface to
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
eigendec.html:48:1 (eigendec.Rd:10): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Goals.Rd: zoo
  MultiGASFit.Rd: hessian
  UniGASFit.Rd: hessian
  cpichg.Rd: xts
  fn.solnp.Rd: solnp
  sp500ret.Rd: xts
  sp500rv.Rd: xts
  usunp.Rd: xts
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dirk",
                    family = "Eddelbuettel",
                    role = c("aut", "cre"),
                    email = "edd@debian.org")
as necessary.
Maintainer: ‘Frederick Novomestky <fnovomes@poly.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Frederick",
                    family = "Novomestky",
                    role = c("aut", "cre"),
                    email = "fnovomes@poly.edu")
as necessary.
Found the following HTML validation problems:
NcontributorsRule_identical.html:112:1 (NcontributorsRule_identical.Rd:57): Warning: missing </ul> before </div>
Maintainer: ‘Vanesa Jorda <jordav@unican.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Vanesa",
                      family = "Jorda",
                      role = c("aut", "cre"),
                      email = "jordav@unican.es"),
               person(given = c("Jose", "Maria"),
                      family = "Sarabia",
                      role = "aut",
                      email = "jose.sarabia@unican.es"),
               person(given = "Markus",
                      family = "Jäntti.",
                      role = "aut",
                      email = "markus.jantti@sofi.su.se"))
as necessary.

The Description field contains
  <arXiv:1808.09831> for a detailed description of the estimation
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stéphane",
                    family = "Laurent",
                    role = c("aut", "cre"),
                    email = "laurent_step@outlook.fr")
as necessary.
Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/ropensci/gbifdb
which should likely be
  https://github.com/ropensci/gbifdb/issues
instead.
Maintainer: ‘Ryan Sun <ryansun.work@gmail.com>’

The Description field contains
  <arXiv:1710.02469> for more details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gbm.factorplot.R’ ‘gbm.mapsf.R’
'library' or 'require' call not declared from: ‘MASS’
Found the following HTML validation problems:
init_cluster.html:47:1 (init_cluster.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Guang Yang <gyang274@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Guang",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "gyang274@gmail.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/gbp.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
gbp2d_viewer.html:54:1 (gbp2d_viewer.Rd:14): Warning: missing </ul> before </div>
gbp2q_viewer.html:54:1 (gbp2q_viewer.Rd:14): Warning: missing </ul> before </div>
gbp3d_viewer.html:54:1 (gbp3d_viewer.Rd:14): Warning: missing </ul> before </div>
gbp3q_viewer.html:54:1 (gbp3q_viewer.Rd:14): Warning: missing </ul> before </div>
gbp4d_viewer.html:54:1 (gbp4d_viewer.Rd:14): Warning: missing </ul> before </div>
gbp4q_viewer.html:54:1 (gbp4q_viewer.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Bin Wang <bwang@southalabama.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bin",
                      family = "Wang.",
                      role = "aut",
                      email = "bwang@southalabama.edu"),
               person(given = "Bin",
                      family = "Wang",
                      role = "cre",
                      email = "bwang@southalabama.edu"))
as necessary.
checkRd: (-1) fitgbd.Rd:29: Escaped LaTeX specials: \&
checkRd: (-1) fitgld.Rd:30: Escaped LaTeX specials: \&
checkRd: (-1) gb.Rd:28: Escaped LaTeX specials: \&
checkRd: (-1) gbd.Rd:37: Escaped LaTeX specials: \&
checkRd: (-1) gld.Rd:36: Escaped LaTeX specials: \&
Maintainer: ‘Zachariah Gompert <zach.gompert@usu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zachariah",
                    family = "Gompert",
                    role = c("aut", "cre"),
                    email = "zach.gompert@usu.edu")
as necessary.
checkRd: (-1) estprops.Rd:40: Escaped LaTeX specials: \&
Maintainer: ‘Waley W. J. Liang <wliang10@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Waley", "W.", "J."),
                    family = "Liang",
                    role = c("aut", "cre"),
                    email = "wliang10@gmail.com")
as necessary.
Maintainer: ‘Andrew Tamalunas <atamalu@g.clemson.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Tamalunas",
                    role = c("aut", "cre"),
                    email = "atamalu@g.clemson.edu")
as necessary.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = c("Nancy", "R."),
                      family = "Zhang",
                      role = "aut"))
as necessary.
Maintainer: ‘Yi Yang <yi.yang6@mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yi",
                      family = "Yang",
                      role = c("aut", "cre"),
                      email = "yi.yang6@mcgill.ca"),
               person(given = "Yuwen",
                      family = "Gu",
                      role = "aut",
                      email = "yuwen.gu@uconn.edu"),
               person(given = "Hui",
                      family = "Zou",
                      role = "aut",
                      email = "hzou@stat.umn.edu"))
as necessary.
Maintainer: ‘Olivier Blarquez <blarquez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Global", "Paleofire", "Working"),
                      family = "Group",
                      role = "aut",
                      email = "paleofire@univ-fcomte.fr"),
               person(given = "Olivier",
                      family = "Blarquez",
                      role = "cre",
                      email = "blarquez@gmail.com"))
as necessary.
Maintainer: ‘Hanjie Shen <shenhanjie0418@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hanjie",
                      family = "Shen",
                      role = c("aut", "cre"),
                      email = "shenhanjie0418@gmail.com"),
               person(given = "Ruben",
                      family = "Carmona",
                      role = "aut",
                      email = "ruben.carmona13@gmail.com"),
               person(given = "Loren",
                      family = "Mell",
                      role = "aut",
                      email = "lmell@ucsd.edu"))
as necessary.
Found the following HTML validation problems:
gchart_available_areas.html:53:1 (gchart_available_areas.Rd:15): Warning: missing </ul> before </div>
gchart_cache_dir.html:48:1 (gchart_cache_dir.Rd:12): Warning: missing </ul> before </div>
gchart_remove_cache_path.html:52:1 (gchart_remove_cache_path.Rd:12): Warning: missing </ul> before </div>
path_existing_root.html:46:1 (path_existing_root.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
gcite_wordcloud.html:64:1 (gcite_wordcloud.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Zifei Han <hanzifei1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zifei",
                    family = "Han",
                    role = c("aut", "cre"),
                    email = "hanzifei1@gmail.com")
as necessary.
Maintainer: ‘Gherardo Varando <gherardo.varando@gmail.com>’

The Description field contains
  minimization problem.  Varando G, Hansen NR (2020) <arXiv:2005.10483>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) listInverseBlocks.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{List all the inverse matrices of the leading sub-matrix of P=Sigma^{-1}
       |                                                                           ^
checkRd: (-1) listInverseBlocks.Rd:17: Lost braces; missing escapes or markup?
    17 | List all the inverse matrices of the leading sub-matrix of P=Sigma^{-1}
       |                                                                    ^
Maintainer: ‘Hugo Gasca-Aragon <hugo_gasca_aragon@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hugo",
                    family = "Gasca-Aragon",
                    role = c("aut", "cre"),
                    email = "hugo_gasca_aragon@hotmail.com")
as necessary.
checkRd: (-1) gconsensus.Rd:48-54: Lost braces
    48 | {\code{display.signif.digits} an integer representing the number of significant digits to be obtained in the adaptative approach of the Monte Carlo simulation,
       | ^
Found the following HTML validation problems:
e2_Monte_Carlo_EM.html:116:1 (e2_Monte_Carlo_EM.Rd:54): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print_df.html:55:1 (print_df.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Kevin Jakob <Kevin.Jakob.Research@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kevin",
                    family = "Jakob",
                    role = c("aut", "cre"),
                    email = "kevin.jakob.research@gmail.com")
as necessary.
Found the following HTML validation problems:
export-methods.html:64:1 (export-methods.Rd:32): Warning: missing </ul> before </div>
plot-methods.html:58:1 (plot-methods.Rd:21): Warning: missing </ul> before </div>
checkRd: (-1) GCTF.Rd:56: Lost braces; missing escapes or markup?
    56 |   U : A matrix which has N-rows and J-columns (J < {N, M}).
       |                                                    ^
checkRd: (-1) GCTF.Rd:57: Lost braces; missing escapes or markup?
    57 |   V : A matrix which has M-rows and J-columns (J < {N, M}).
       |                                                    ^
checkRd: (-1) GCTF.Rd:58: Lost braces; missing escapes or markup?
    58 |   J : The number of dimension (J < {N, M}).
       |                                    ^
Maintainer: ‘Antony Unwin<unwin@math.uni-augsburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Antony",
                    family = "Unwin",
                    role = c("aut", "cre"),
                    email = "unwin@math.uni-augsburg.de")
as necessary.
Maintainer: ‘Joshua O'Brien <joshmobrien@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joshua",
                    family = "O'Brien",
                    role = c("aut", "cre"),
                    email = "joshmobrien@gmail.com")
as necessary.
checkRd: (-1) nearblack.Rd:30: Lost braces
    30 | code{infile=}, indicating that the input file should be
       |     ^
Maintainer: ‘David Brahm <brahm@alum.mit.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Brahm",
                    role = c("aut", "cre"),
                    email = "brahm@alum.mit.edu")
as necessary.
Found the following calls to attach():
File ‘g.data/R/g.data.attach.R’:
  attach(NULL, pos, basename(dir))
See section ‘Good practice’ in ‘?attach’.
Found the following HTML validation problems:
deprecated.html:73:1 (deprecated.Rd:55): Warning: missing </ul> before </div>
translate.logit.html:46:1 (translate.logit.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
shinyAppServer.html:54:1 (shinyAppServer.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Paul Murrell <paul@stat.auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paul",
                    family = "Murrell",
                    role = c("aut", "cre"),
                    email = "paul@stat.auckland.ac.nz")
as necessary.
Maintainer: ‘Alex Hayes <alexpghayes@gmail.com>’

The Description field contains
  see Chen et al. (2021) <arXiv:2108.03336> for details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
Transition-slots.html:50:1 (Transition-slots.Rd:31): Warning: missing </ul> before </div>
Maintainer: ‘Ezequiel Smucler <ezequiels.90@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daniel",
                      family = "Peña",
                      role = "aut",
                      email = "daniel.pena@uc3m.es"),
               person(given = "Ezequiel",
                      family = "Smucler",
                      role = c("aut", "cre"),
                      email = "ezequiels.90@gmail.com"),
               person(given = "Victor",
                      family = "Yohai",
                      role = "aut",
                      email = "vyohai@dm.uba.ar"))
as necessary.
Found the following HTML validation problems:
v2m.html:55:1 (v2m.Rd:13): Warning: missing </ul> before </div>
checkRd: (-1) GDSARM.Rd:7: Lost braces
     7 | Cand{\`e}s, E. and Tao, T. (2007). The Dantzig selector: Statistical estimation when p is much
       |     ^
checkRd: (-1) GDSARM.Rd:10: Lost braces
    10 | Dopico-Garc{\' i}a, M.S., Valentao, P., Guerra, L., Andrade, P. B., and Seabra, R. M. (2007).
       |            ^
checkRd: (-1) GDS_givencols.Rd:7: Lost braces
     7 | Cand{\`e}s, E. and Tao, T. (2007). The Dantzig selector: Statistical estimation when p is much
       |     ^
checkRd: (-1) GDS_givencols.Rd:10: Lost braces
    10 | Dopico-Garc{\' i}a, M.S., Valentao, P., Guerra, L., Andrade, P. B., and Seabra, R. M. (2007).
       |            ^
checkRd: (-1) dantzig.delta.Rd:7: Lost braces
     7 | Cand{\`e}s, E. and Tao, T. (2007). The Dantzig selector: Statistical estimation when p is much
       |     ^
checkRd: (-1) dantzigS.Rd:7: Lost braces
     7 | Cand{\`e}s, E. and Tao, T. (2007). The Dantzig selector: Statistical estimation when p is much
       |     ^
checkRd: (-1) dataCompoundExt.Rd:6: Lost braces
     6 | \title{Compound Extraction experiment of Dopico-Garc{\' i}a et al. (2007)}
       |                                                     ^
checkRd: (-1) dataCompoundExt.Rd:35: Lost braces
    35 | An analytical experiment conducted by Dopico-Garc{\' i}a et al. (2007) to
       |                                                  ^
checkRd: (-1) dataCompoundExt.Rd:22: Lost braces
    22 | Dopico-Garc{\' i}a, M.S., Valentao, P., Guerra, L., Andrade, P. B., and Seabra, R. M. (2007).
       |            ^
Maintainer: ‘Partha Sarathi Bishnu <psbishnu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Partha", "Sarathi"),
                    family = "Bishnu",
                    role = c("aut", "cre"),
                    email = "psbishnu@gmail.com")
as necessary.
Found the following HTML validation problems:
raw2gdx.html:55:1 (raw2gdx.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Joshua French <joshua.french@ucdenver.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joshua",
                    family = "French",
                    role = c("aut", "cre"),
                    email = "joshua.french@ucdenver.edu")
as necessary.
Maintainer: ‘Junghi Kim <junghikim0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Junghi",
                      family = "Kim",
                      role = c("aut", "cre"),
                      email = "junghikim0@gmail.com"),
               person(given = "Wei",
                      family = "Pan",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
emes.html:85:1 (emes.Rd:24): Warning: missing </ul> before </div>
es.html:93:1 (es.Rd:29): Warning: missing </ul> before </div>
geebt.html:75:1 (geebt.Rd:20): Warning: missing </ul> before </div>
geega.html:65:1 (geega.Rd:16): Warning: missing </ul> before </div>
initial_Lambda.html:76:1 (initial_Lambda.Rd:22): Warning: missing </ul> before </div>
print.geecure.html:50:1 (print.geecure.Rd:11): Warning: missing </ul> before </div>
print.geecure2.html:50:1 (print.geecure2.Rd:11): Warning: missing </ul> before </div>
varest.html:117:1 (varest.Rd:39): Warning: missing </ul> before </div>
varest2.html:86:1 (varest2.Rd:26): Warning: missing </ul> before </div>
Found the following HTML validation problems:
clean_drive_folders_by_name.html:64:1 (clean_drive_folders_by_name.Rd:22): Warning: missing </ul> before </div>
compile_db.html:66:1 (compile_db.Rd:20): Warning: missing </ul> before </div>
gee_message.html:48:1 (gee_message.Rd:11): Warning: missing </ul> before </div>
output_message.html:51:1 (output_message.Rd:13): Warning: missing </ul> before </div>
print_version.html:47:1 (print_version.Rd:11): Warning: missing </ul> before </div>
process_single_file.html:54:1 (process_single_file.Rd:14): Warning: missing </ul> before </div>
process_source_files.html:51:1 (process_source_files.Rd:13): Warning: missing </ul> before </div>
remove_tables.html:48:1 (remove_tables.Rd:11): Warning: missing </ul> before </div>
set_depend.html:63:1 (set_depend.Rd:20): Warning: missing </ul> before </div>
set_dirs.html:48:1 (set_dirs.Rd:11): Warning: missing </ul> before </div>
write_grid.html:47:1 (write_grid.Rd:11): Warning: missing </ul> before </div>
write_grid_stats.html:68:1 (write_grid_stats.Rd:24): Warning: missing </ul> before </div>
write_log_file.html:48:1 (write_log_file.Rd:11): Warning: missing </ul> before </div>
write_state_file.html:59:1 (write_state_file.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Lee McDaniel <lmcda4@lsuhsc.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zheng Li <zheng.li@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ming",
                      family = "Wang",
                      role = "aut",
                      email = "mwang@phs.psu.edu"),
               person(given = "Zheng",
                      family = "Li",
                      role = "cre",
                      email = "zheng.li@outlook.com"))
as necessary.
checkRd: (-1) dental.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dental.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dental.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dental.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dental.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dental.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) seizure.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) geexex.Rd:18: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
compute_pairwise_sum_of_list.html:61:1 (compute_pairwise_sum_of_list.Rd:19): Warning: missing </ul> before </div>
compute_sum_of_list.html:50:1 (compute_sum_of_list.Rd:12): Warning: missing </ul> before </div>
grab_GFUN-methods.html:52:1 (grab_GFUN-methods.Rd:19): Warning: missing </ul> before </div>
grab_estFUN-methods.html:49:1 (grab_estFUN-methods.Rd:15): Warning: missing </ul> before </div>
grab_psiFUN_list-methods.html:52:1 (grab_psiFUN_list-methods.Rd:19): Warning: missing </ul> before </div>
show-methods.html:58:1 (show-methods.Rd:27): Warning: missing </ul> before </div>
weights-methods.html:50:1 (weights-methods.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Luke Harmon <lukeh@uidaho.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luke",
                      family = "Harmon",
                      role = c("aut", "cre"),
                      email = "lukeh@uidaho.edu"),
               person(given = "Matthew",
                      family = "Pennell",
                      role = "aut"),
               person(given = "Chad",
                      family = "Brock",
                      role = "aut"),
               person(given = "Joseph",
                      family = "Brown",
                      role = "aut"),
               person(given = "Wendell",
                      family = "Challenger",
                      role = "aut"),
               person(given = "Jon",
                      family = "Eastman",
                      role = "aut"),
               person(given = "Rich",
                      family = "FitzJohn",
                      role = "aut"),
               person(given = "Rich",
                      family = "Glor",
                      role = "aut"),
               person(given = "Gene",
                      family = "Hunt",
                      role = "aut"),
               person(given = "Liam",
                      family = "Revell",
                      role = "aut"),
               person(given = "Graham",
                      family = "Slater",
                      role = "aut"),
               person(given = "Josef",
                      family = "Uyeda",
                      role = "aut"),
               person(given = "Jason",
                      family = "Weir",
                      role = "aut"),
               person(given = "CRAN",
                      family = "team",
                      role = "aut",
                      comment = "corrections in 2022"))
as necessary.
Maintainer: ‘Xiaoyan Wang <xywang@hnu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaoyan",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "xywang@hnu.edu.cn"),
               person(given = "Hongduo",
                      family = "Liu",
                      role = "aut"),
               person(given = "Shuangge",
                      family = "Ma",
                      role = "aut"))
as necessary.
Maintainer: ‘Michael Friendly <friendly@yorku.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Georges",
                      family = "Monette",
                      role = "aut"),
               person(given = "Michael",
                      family = "Friendly",
                      role = c("aut", "cre"),
                      email = "friendly@yorku.ca"))
as necessary.
Maintainer: ‘Artem Sokolov <artem.sokolov@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Artem",
                    family = "Sokolov",
                    role = c("aut", "cre"),
                    email = "artem.sokolov@gmail.com")
as necessary.
checkRd: (-1) gelnet.logreg.obj.Rd:17: Lost braces; missing escapes or markup?
    17 | \item{y}{n-by-1 binary response vector sampled from {0,1}}
       |                                                     ^
Found the following HTML validation problems:
MphCalcLogL.html:62:1 (MphCalcLogL.Rd:18): Warning: missing </ul> before </div>
calc_sigma.html:70:1 (calc_sigma.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Luisa Salazar Vizcaya <luisapaola.salazarvizcaya@insel.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luisa", "Salazar"),
                      family = "Vizcaya",
                      role = c("aut", "cre"),
                      email = "luisapaola.salazarvizcaya@insel.ch"),
               person(given = "Nello",
                      family = "Blaser",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Gsponer",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Seongho Kim <biostatistician.kim@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Seongho",
                    family = "Kim",
                    role = c("aut", "cre"),
                    email = "biostatistician.kim@gmail.com")
as necessary.
Maintainer: ‘Michel Ballings <Michel.Ballings@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Egon",
                      family = "Willighagen",
                      role = "aut"),
               person(given = "Michel",
                      family = "Ballings",
                      role = c("aut", "cre"),
                      email = "michel.ballings@gmail.com"))
as necessary.
Found the following HTML validation problems:
dot-createPatternFile.html:50:1 (dot-createPatternFile.Rd:12): Warning: missing </ul> before </div>
dot-generateColors.html:54:1 (dot-generateColors.Rd:14): Warning: missing </ul> before </div>
dot-getBarcodeFilter.html:46:1 (dot-getBarcodeFilter.Rd:10): Warning: missing </ul> before </div>
dot-getMinDist.html:56:1 (dot-getMinDist.Rd:16): Warning: missing </ul> before </div>
dot-getWobblePos.html:46:1 (dot-getWobblePos.Rd:10): Warning: missing </ul> before </div>
dot-revComp.html:46:1 (dot-revComp.Rd:10): Warning: missing </ul> before </div>
dot-revComp_EqLength.html:50:1 (dot-revComp_EqLength.Rd:12): Warning: missing </ul> before </div>
dot-revComp_UneqLength.html:46:1 (dot-revComp_UneqLength.Rd:10): Warning: missing </ul> before </div>
dot-testDirIdentifier.html:46:1 (dot-testDirIdentifier.Rd:10): Warning: missing </ul> before </div>
genBaRcode_app.html:47:1 (genBaRcode_app.Rd:11): Warning: missing </ul> before </div>
plotClusterTree.html:70:1 (plotClusterTree.Rd:26): Warning: missing </ul> before </div>
Maintainer: ‘Horst Lewitschnig <Horst.Lewitschnig@infineon.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Horst",
                      family = "Lewitschnig",
                      role = c("aut", "cre"),
                      email = "horst.lewitschnig@infineon.com"),
               person(given = "David",
                      family = "Lenzi",
                      role = "aut"))
as necessary.
Maintainer: ‘Helgem de Souza Ribeiro Martins <helgem.souza@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Helgem", "de", "Souza", "Ribeiro"),
                      family = "Martins",
                      role = c("aut", "cre"),
                      email = "helgem.souza@gmail.com"),
               person(given = c("Anderson", "Ribeiro"),
                      family = "Duarte",
                      role = "aut"))
as necessary.
Maintainer: ‘Francis Huang <flh3@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Francis",
                    family = "Huang",
                    role = c("aut", "cre"),
                    email = "flh3@hotmail.com")
as necessary.
Maintainer: ‘Lincoln Mullen <lincoln@lincolnmullen.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Shaiful Anuar Abu Bakar <saab@um.edu.my>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Shaiful", "Anuar", "Abu"),
                    family = "Bakar",
                    role = c("aut", "cre"),
                    email = "saab@um.edu.my")
as necessary.
Found the following HTML validation problems:
constrain.html:54:1 (constrain.Rd:14): Warning: missing </ul> before </div>
expand.html:50:1 (expand.Rd:12): Warning: missing </ul> before </div>
getfreqs.html:50:1 (getfreqs.Rd:12): Warning: missing </ul> before </div>
grapes-bq-grapes.html:50:1 (grapes-bq-grapes.Rd:12): Warning: missing </ul> before </div>
grapes-bt-grapes.html:52:1 (grapes-bt-grapes.Rd:12): Warning: missing </ul> before </div>
hanning.window.html:46:1 (hanning.window.Rd:10): Warning: missing </ul> before </div>
print.stft.html:51:1 (print.stft.Rd:12): Warning: missing </ul> before </div>
pseudolines.html:59:1 (pseudolines.Rd:16): Warning: missing </ul> before </div>
removeZero.html:46:1 (removeZero.Rd:10): Warning: missing </ul> before </div>
seq.log.html:63:1 (seq.log.Rd:18): Warning: missing </ul> before </div>
shift.html:58:1 (shift.Rd:16): Warning: missing </ul> before </div>
stftcalc.html:106:1 (stftcalc.Rd:48): Warning: missing </ul> before </div>
subs.html:55:1 (subs.Rd:14): Warning: missing </ul> before </div>
uniform.window.html:46:1 (uniform.window.Rd:10): Warning: missing </ul> before </div>
checkRd: (-1) GeneF-internal.Rd:40: Lost braces; missing escapes or markup?
    40 | \author{Yinglei Lai {ylai@gwu.edu}}
       |                     ^
checkRd: (-1) flexorhtest.Rd:57: Lost braces; missing escapes or markup?
    57 | \author{Yinglei Lai {ylai@gwu.edu}}
       |                     ^
checkRd: (-1) flexorhtest.pvalue.Rd:57: Lost braces; missing escapes or markup?
    57 | \author{Yinglei Lai {ylai@gwu.edu}}
       |                     ^
Running examples in ‘geneHapR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: LDheatmap
> ### Title: This function produces a pairwise LD plot.
> ### Aliases: LDheatmap plot_LDheatmap
> 
> ### ** Examples
> 
> # Pass LDheatmap a SnpMatrix object
> data(geneHapR_test)
> plot_LDheatmap(hap = hapResult,
+                gff = gff,
+                Chr = hapResult[1,2],
+                start = 4000, end = 8200)
Warning in LDheatmap(gdat, gff = gff, Chr = Chr, start = start, end = end,  :
  Only bi-alleles supported,Variables with less or more than 2 allels will be omitted.
Loading required namespace: GenomeInfoDb
Failed with error:  ‘there is no package called ‘GenomeInfoDb’’
Error in h(simpleError(msg, call)) : 
  error in evaluating the argument 'i' in selecting a method for function '[': unable to load required package ‘GenomeInfoDb’
Calls: plot_LDheatmap ... vapply -> FUN -> is -> getClassDef -> .requirePackage
Execution halted
Found the following HTML validation problems:
sites_compar.html:73:1 (sites_compar.Rd:28): Warning: missing </ul> before </div>
Maintainer: ‘Venkatraman E. Seshan <seshanv@mskcc.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Venkatraman", "E."),
                    family = "Seshan",
                    role = c("aut", "cre"),
                    email = "seshanv@mskcc.org")
as necessary.
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:192:1 (inst/NEWS.Rd:77): Warning: missing </ul> before </div>
NEWS.html:102:1 (inst/NEWS.Rd:41): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:117:1 (inst/NEWS.Rd:48): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:137:1 (inst/NEWS.Rd:56): Warning: <h4> anchor "CORRECTED-BUGS" already defined
NEWS.html:155:1 (inst/NEWS.Rd:64): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:172:1 (inst/NEWS.Rd:71): Warning: <h4> anchor "CORRECTED-BUGS" already defined
Found the following HTML validation problems:
genepop-utils.html:48:1 (genepop-utils.Rd:14): Warning: missing </ul> before </div>
setMantelSeed.html:46:1 (setMantelSeed.Rd:10): Warning: missing </ul> before </div>
setRandomSeed.html:46:1 (setRandomSeed.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘H. D. Vinod <vinod@fordham.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Prof.", "H.", "D."),
                      family = "Vinod",
                      role = "aut"),
               person(given = "Fordham",
                      family = "University",
                      role = "aut"),
               person(family = "NY.",
                      role = "aut"),
               person(given = c("H.", "D."),
                      family = "Vinod",
                      role = "cre",
                      email = "vinod@fordham.edu"))
as necessary.
Maintainer: ‘Jonas Peters <jonas.peters@math.ku.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jonas",
                      family = "Peters",
                      role = c("aut", "cre"),
                      email = "jonas.peters@math.ku.dk"),
               person(given = c("Rajen", "D."),
                      family = "Shah",
                      role = "aut"))
as necessary.
Maintainer: ‘Aurelien Nicosia <nicosia.aurelien@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Aurelien",
                      family = "Nicosia",
                      role = c("aut", "cre"),
                      email = "nicosia.aurelien@gmail.com"),
               person(given = "Simon",
                      family = "Baillargeon-Ladouceur",
                      role = "aut"))
as necessary.
Maintainer: ‘Max Welz <welz@ese.eur.nl>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  and Fernández-Val (2020) <arXiv:1712.04802>. This package's workhorse
  <arXiv:1712.04802> for a suite of user-specified machine learners. All
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following significant warnings:
  Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/geneSLOPE.Rcheck/00install.out’ for details.
Found the following HTML validation problems:
identify_clump.clumpingResult.html:51:1 (identify_clump.clumpingResult.Rd:12): Warning: missing </ul> before </div>
identify_clump.selectionResult.html:51:1 (identify_clump.selectionResult.Rd:12): Warning: missing </ul> before </div>
plot.clumpingResult.html:59:1 (plot.clumpingResult.Rd:16): Warning: missing </ul> before </div>
plot.selectionResult.html:59:1 (plot.selectionResult.Rd:16): Warning: missing </ul> before </div>
print.clumpingResult.html:51:1 (print.clumpingResult.Rd:12): Warning: missing </ul> before </div>
print.phenotypeData.html:51:1 (print.phenotypeData.Rd:12): Warning: missing </ul> before </div>
print.screeningResult.html:51:1 (print.screeningResult.Rd:12): Warning: missing </ul> before </div>
summary.clumpingResult.html:51:1 (summary.clumpingResult.Rd:12): Warning: missing </ul> before </div>
summary.phenotypeData.html:51:1 (summary.phenotypeData.Rd:12): Warning: missing </ul> before </div>
summary.screeningResult.html:51:1 (summary.screeningResult.Rd:12): Warning: missing </ul> before </div>
summary.selectionResult.html:55:1 (summary.selectionResult.Rd:14): Warning: missing </ul> before </div>
checkRd: (-1) cpm.Rd:70: Lost braces; missing escapes or markup?
    70 | covariates included in \code{formula_l} or {formula_s} (required).}
       |                                            ^
Found the following HTML validation problems:
app_msg_functions.html:98:1 (app_msg_functions.Rd:61): Warning: missing </ul> before </div>
app_output_utilities.html:89:1 (app_output_utilities.Rd:46): Warning: missing </ul> before </div>
app_panels.html:63:1 (app_panels.Rd:26): Warning: missing </ul> before </div>
app_ui_utilities.html:79:1 (app_ui_utilities.Rd:52): Warning: missing </ul> before </div>
app_utilities.html:120:1 (app_utilities.Rd:72): Warning: missing </ul> before </div>
cpmCPCellPlot.html:63:1 (cpmCPCellPlot.Rd:18): Warning: missing </ul> before </div>
model_utility_functions.html:58:1 (model_utility_functions.Rd:25): Warning: missing </ul> before </div>
plot.splitFull.html:75:1 (plot.splitFull.Rd:25): Warning: missing </ul> before </div>
plot.splitSummary.html:79:1 (plot.splitSummary.Rd:24): Warning: missing </ul> before </div>
print.cpm.html:51:1 (print.cpm.Rd:12): Warning: missing </ul> before </div>
print.pkm.html:51:1 (print.pkm.Rd:12): Warning: missing </ul> before </div>
simpleMplot.html:60:1 (simpleMplot.Rd:16): Warning: missing </ul> before </div>
summary.estM.html:55:1 (summary.estM.Rd:14): Warning: missing </ul> before </div>
update_input.html:68:1 (update_input.Rd:23): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-fetch_csv_page.html:68:1 (dot-fetch_csv_page.Rd:24): Warning: missing </ul> before </div>
dot-onLoad.html:50:1 (dot-onLoad.Rd:12): Warning: missing </ul> before </div>
filter_DOI.html:50:1 (filter_DOI.Rd:12): Warning: missing </ul> before </div>
filter_GENUS.html:50:1 (filter_GENUS.Rd:12): Warning: missing </ul> before </div>
filter_INSTCODE.html:50:1 (filter_INSTCODE.Rd:12): Warning: missing </ul> before </div>
filter_ORIGCTY.html:50:1 (filter_ORIGCTY.Rd:12): Warning: missing </ul> before </div>
filter_SAMPSTAT.html:50:1 (filter_SAMPSTAT.Rd:12): Warning: missing </ul> before </div>
filter_SPECIES.html:50:1 (filter_SPECIES.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘crossover.R’ ‘initialize_population.R’ ‘mutation.R’
Maintainer: ‘Gregory Warnes <greg@warnes.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gregory",
                      family = "Warnes",
                      role = c("aut", "cre"),
                      email = "greg@warnes.net"),
               person(given = c("with", "contributions", "from", "Gregor"),
                      family = "Gorjanc",
                      role = "aut"),
               person(given = "Friedrich",
                      family = "Leisch",
                      role = "aut"),
               person(given = "Michael",
                      family = "Man.",
                      role = "aut"))
as necessary.
checkRd: (-1) LD.Rd:37-46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:47-64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:66-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:78-79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:80-81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:82-83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:84-85: Lost braces in \itemize; meant \describe ?
checkRd: (-1) LD.Rd:86-87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:48-58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:59-76: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:78-87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:93-94: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:95-96: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:97-98: Lost braces in \itemize; meant \describe ?
checkRd: (-1) diseq.Rd:124: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) diseq.Rd:125: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) diseq.Rd:126-128: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) diseq.Rd:129: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Ryan C. Graebner <ryan.graebner@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ryan", "C."),
                      family = "Graebner",
                      role = c("aut", "cre"),
                      email = "ryan.graebner@gmail.com"),
               person(given = "Alfonso",
                      family = "Cuesta-Marcos",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
print.gravity.html:51:1 (print.gravity.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Marek Gagolewski <marek@gagolewski.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
print.genius_album.html:51:1 (print.genius_album.Rd:12): Warning: missing </ul> before </div>
print.genius_annotation.html:51:1 (print.genius_annotation.Rd:12): Warning: missing </ul> before </div>
print.genius_artist.html:51:1 (print.genius_artist.Rd:12): Warning: missing </ul> before </div>
print.genius_referent.html:51:1 (print.genius_referent.Rd:12): Warning: missing </ul> before </div>
print.genius_resource.html:51:1 (print.genius_resource.Rd:12): Warning: missing </ul> before </div>
print.genius_song.html:51:1 (print.genius_song.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Yaoyong Li<liyaoyong85@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yaoyong",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "liyaoyong85@gmail.com")
as necessary.
Maintainer: ‘Torben Tvedebrink <tvede@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Torben",
                    family = "Tvedebrink",
                    role = c("aut", "cre"),
                    email = "tvede@math.aau.dk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
app_genogeo.html:51:1 (app_genogeo.Rd:13): Warning: missing </ul> before </div>
bar_colour.html:50:1 (bar_colour.Rd:12): Warning: missing </ul> before </div>
profile_AA_x0.html:59:1 (profile_AA_x0.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Daniel Fischer <daniel.fischer@luke.fi>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Fischer",
                    role = c("aut", "cre"),
                    email = "daniel.fischer@luke.fi")
as necessary.
Maintainer: ‘Lionel Guy <lionel.guy@imbim.uu.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lionel",
                    family = "Guy",
                    role = c("aut", "cre"),
                    email = "lionel.guy@imbim.uu.se")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) barto.Rd:15-18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) barto.Rd:19-22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) barto.Rd:23-26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) chrY_subseg.Rd:16-17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) chrY_subseg.Rd:18-19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mauve_bbone.Rd:16-17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mauve_bbone.Rd:18-19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) three_genes.Rd:17-18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) three_genes.Rd:19-20: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Zihuai He <zihuai@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zihuai",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "zihuai@stanford.edu")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
'library' or 'require' call not declared from: ‘gridExtra’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot.precision.Rd’ ‘ridge.R’
Maintainer: ‘Sylvain Gubian <DL.RSupport@pmi.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sylvain",
                      family = "Gubian",
                      role = c("aut", "cre"),
                      email = "dl.rsupport@pmi.com"),
               person(given = "Yang",
                      family = "Xiang",
                      role = "aut"),
               person(given = "Brian",
                      family = "Suomela",
                      role = "aut"),
               person(given = "Julia",
                      family = "Hoeng",
                      role = "aut"),
               person(given = "PMP",
                      family = "SA.",
                      role = "aut"))
as necessary.
File ‘GenSA/libs/GenSA.so’:
  Found non-API call to R: ‘SET_TYPEOF’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Shiqing Yu <syu.phd@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shiqing",
                      family = "Yu",
                      role = c("aut", "cre"),
                      email = "syu.phd@gmail.com"),
               person(given = "Lina",
                      family = "Lin",
                      role = "aut"),
               person(given = "Wally",
                      family = "Gilks",
                      role = "aut"))
as necessary.
Maintainer: ‘John P Nolan <jpnolan@american.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "P"),
                    family = "Nolan",
                    role = c("aut", "cre"),
                    email = "jpnolan@american.edu")
as necessary.
checkRd: (-1) cfunc.new.Rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cfunc.new.Rd:58-59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cfunc.new.Rd:60-61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cfunc.new.Rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cfunc.new.Rd:63-64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cfunc.new.Rd:65: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Jixiang Wu <jixiang.wu@sdstate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jixiang",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "jixiang.wu@sdstate.edu")
as necessary.
Maintainer: ‘Artur Araujo <artur.stat@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Gertjan van den Burg <gertjanvandenburg@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.

The BugReports field in DESCRIPTION has
  https://github.com/GjjvdBurg/RGenSVM
which should likely be
  https://github.com/GjjvdBurg/RGenSVM/issues
instead.
checkRd: (-1) gensvm.grid.Rd:125: Lost braces
   125 | "Kernels in GenSVM" in the code{ink{gensvm-package}} page for more info.}
       |                                ^
checkRd: (-1) gensvm.grid.Rd:125: Lost braces
   125 | "Kernels in GenSVM" in the code{ink{gensvm-package}} page for more info.}
       |                                    ^
checkRd: (-1) gensvm.grid.Rd:127: Lost braces
   127 | GenSVM" in the code{ink{gensvm-package}} page for more info.}
       |                    ^
checkRd: (-1) gensvm.grid.Rd:127: Lost braces
   127 | GenSVM" in the code{ink{gensvm-package}} page for more info.}
       |                        ^
checkRd: (-1) gensvm.grid.Rd:129: Lost braces
   129 | section "Kernels in GenSVM" in the code{ink{gensvm-package}} page for more 
       |                                        ^
checkRd: (-1) gensvm.grid.Rd:129: Lost braces
   129 | section "Kernels in GenSVM" in the code{ink{gensvm-package}} page for more 
       |                                            ^
Maintainer: ‘Carlos Biagolini-Jr.<c.biagolini@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carlos",
                    family = "Biagolini-Jr.",
                    role = c("aut", "cre"),
                    email = "c.biagolini@gmail.com")
as necessary.
Maintainer: ‘Timothy M. Beissinger <timbeissinger@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Timothy", "M."),
                    family = "Beissinger",
                    role = c("aut", "cre"),
                    email = "timbeissinger@gmail.com")
as necessary.
'::' or ':::' import not declared from: ‘geoR’
'library' or 'require' call not declared from: ‘geoR’
Found the following HTML validation problems:
download_gpkg.html:62:1 (download_gpkg.Rd:22): Warning: missing </ul> before </div>
load_gpkg.html:46:1 (load_gpkg.Rd:10): Warning: missing </ul> before </div>
select_data_type.html:50:1 (select_data_type.Rd:12): Warning: missing </ul> before </div>
select_year_input.html:50:1 (select_year_input.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
plot.cate.html:94:1 (plot.cate.Rd:41): Warning: missing </ul> before </div>
plot.distlist.html:75:1 (plot.distlist.Rd:28): Warning: missing </ul> before </div>
plot.est.html:59:1 (plot.est.Rd:16): Warning: missing </ul> before </div>
plot.hyperframe.html:97:1 (plot.hyperframe.Rd:42): Warning: missing </ul> before </div>
plot.im.html:84:1 (plot.im.Rd:33): Warning: missing </ul> before </div>
plot.imlist.html:99:1 (plot.imlist.Rd:42): Warning: missing </ul> before </div>
plot.list.html:106:1 (plot.list.Rd:47): Warning: missing </ul> before </div>
plot.obs.html:68:1 (plot.obs.Rd:21): Warning: missing </ul> before </div>
plot.ppplist.html:65:1 (plot.ppplist.Rd:20): Warning: missing </ul> before </div>
plot.weights.html:62:1 (plot.weights.Rd:19): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘add_geometry.Rd’ ‘add_level.Rd’ ‘common.R’
    ‘complete_point_geometry.Rd’ ‘complete_relation_by_geography.Rd’
    ‘coordinates_to_geometry.Rd’ ‘explotation.R’ ‘geodimension.R’
    ‘geolevel.R’ ‘get_empty_geometry_instances.Rd’
    ‘get_higher_level_names.Rd’ ‘get_level_data.Rd’
    ‘get_level_data_geo.Rd’ ‘get_level_geometries.Rd’
    ‘get_level_layer.Rd’ ‘get_level_names.Rd’
    ‘get_unrelated_instances.Rd’ ‘relate_levels.Rd’ ‘relations.R’
    ‘select_levels.Rd’ ‘set_level_data.Rd’ ‘transform_crs.Rd’
Maintainer: ‘Annie C. Smith <annie.smith@dnr.wa.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Annie", "C."),
                      family = "Smith",
                      role = c("aut", "cre"),
                      email = "annie.smith@dnr.wa.gov"),
               person(given = "Phoebe",
                      family = "Zarnetske",
                      role = "aut"),
               person(given = "Kyla",
                      family = "Dahlin",
                      role = "aut"),
               person(given = "Adam",
                      family = "Wilson",
                      role = "aut"),
               person(given = "Andrew",
                      family = "Latimer",
                      role = "aut"))
as necessary.
Maintainer: ‘Ha-Young Shin <hayoung.shin@gmail.com>’

The Description field contains
  Oh, H.-S. (2020) <arXiv:2007.04518>. Also see Fletcher, P. T. (2013)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) calvaria.Rd:8: Lost braces; missing escapes or markup?
     8 | A named list containing \code{x} {a vector containing the ages}
       |                                  ^
checkRd: (-1) calvaria.Rd:9: Lost braces; missing escapes or markup?
     9 |   \code{y} {a matrix where each column is a preshape.} The 23rd, 101st,
       |            ^
Maintainer: ‘Anja Kleebaum <kleebaum@informatik.uni-heidelberg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anja",
                    family = "Kleebaum",
                    role = c("aut", "cre"),
                    email = "kleebaum@informatik.uni-heidelberg.de")
as necessary.
Found the following HTML validation problems:
myColorRamp.html:61:1 (myColorRamp.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
attach_spdf.html:50:1 (attach_spdf.Rd:12): Warning: missing </ul> before </div>
get_geofacet_grob.html:46:1 (get_geofacet_grob.Rd:10): Warning: missing </ul> before </div>
plot.facet_geo.html:51:1 (plot.facet_geo.Rd:12): Warning: missing </ul> before </div>
print.facet_geo.html:59:1 (print.facet_geo.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Fusion.html:100:1 (Fusion.Rd:82): Warning: <h5> anchor "Usage" already defined
Fusion.html:116:1 (Fusion.Rd:92): Warning: <h5> anchor "Usage" already defined
FusionLabel.html:105:1 (FusionLabel.Rd:54): Warning: missing </ul> before </div>
NewAggregFunction.html:46:1 (NewAggregFunction.Rd:10): Warning: missing </ul> before </div>
Zoning.html:152:1 (Zoning.Rd:103): Warning: <h5> anchor "Usage" already defined
Zoning.html:175:1 (Zoning.Rd:116): Warning: <h5> anchor "Usage" already defined
Zoning.html:191:1 (Zoning.Rd:126): Warning: <h5> anchor "Usage" already defined
Zoning.html:197:1 (Zoning.Rd:130): Warning: <h5> anchor "Returns" already defined
Zoning.html:214:1 (Zoning.Rd:139): Warning: <h5> anchor "Usage" already defined
Zoning.html:230:1 (Zoning.Rd:149): Warning: <h5> anchor "Usage" already defined
Zoning.html:236:1 (Zoning.Rd:153): Warning: <h5> anchor "Returns" already defined
Zoning.html:253:1 (Zoning.Rd:162): Warning: <h5> anchor "Usage" already defined
Zoning.html:269:1 (Zoning.Rd:172): Warning: <h5> anchor "Usage" already defined
Zoning.html:275:1 (Zoning.Rd:176): Warning: <h5> anchor "Returns" already defined
Zoning.html:292:1 (Zoning.Rd:185): Warning: <h5> anchor "Usage" already defined
Zoning.html:298:1 (Zoning.Rd:189): Warning: <h5> anchor "Arguments" already defined
Zoning.html:311:1 (Zoning.Rd:196): Warning: <h5> anchor "Returns" already defined
Zoning.html:328:1 (Zoning.Rd:205): Warning: <h5> anchor "Usage" already defined
Zoning.html:334:1 (Zoning.Rd:209): Warning: <h5> anchor "Arguments" already defined
Zoning.html:347:1 (Zoning.Rd:216): Warning: <h5> anchor "Returns" already defined
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/geoFKF.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
logLikMultiNorm.html:56:1 (logLikMultiNorm.Rd:15): Warning: missing </ul> before </div>
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/geoFourierFDA.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘acs_5yr_geo.R’ ‘acs_5yr_rolap.R’ ‘acs_5yr_topic.R’
    ‘anrc_2021_x01.Rd’ ‘as_GeoPackage.Rd’ ‘as_acs_5yr_geo.Rd’
    ‘as_acs_5yr_topic.Rd’ ‘as_flat_table.Rd’ ‘as_geomultistar.Rd’
    ‘as_star_database.Rd’ ‘download_selected_files.Rd’
    ‘get_area_file_names.Rd’ ‘get_area_groups.Rd’ ‘get_area_years.Rd’
    ‘get_areas.Rd’ ‘get_available_area_topics.Rd’
    ‘get_available_area_years.Rd’ ‘get_available_areas.Rd’
    ‘get_code_from_area_name.Rd’ ‘get_geo_attribute_names.Rd’
    ‘get_geo_layer.Rd’ ‘get_metadata.Rd’ ‘get_name_from_area_code.Rd’
    ‘get_names_of_other_topics.Rd’ ‘get_report_names.Rd’
    ‘get_selected_file_names.Rd’ ‘get_subreport_names.Rd’
    ‘get_too_heavy_file_names.Rd’ ‘get_topic_name.Rd’
    ‘select_area_files.Rd’ ‘select_report.Rd’ ‘select_subreport.Rd’
    ‘select_topic.Rd’ ‘set_metadata.Rd’ ‘unzip_files.Rd’
Found the following HTML validation problems:
calculate_cell_size.html:80:1 (calculate_cell_size.Rd:33): Warning: missing </ul> before </div>
get_shape_details.html:49:1 (get_shape_details.Rd:11): Warning: missing </ul> before </div>
get_shape_details_internal.html:49:1 (get_shape_details_internal.Rd:11): Warning: missing </ul> before </div>
hungarian_cc.html:46:1 (hungarian_cc.Rd:10): Warning: missing </ul> before </div>
hungariansafe_cc.html:46:1 (hungariansafe_cc.Rd:10): Warning: missing </ul> before </div>
plot.geogrid.html:55:1 (plot.geogrid.Rd:14): Warning: missing </ul> before </div>
read_polygons.html:49:1 (read_polygons.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
TO_GeoJson.html:69:1 (TO_GeoJson.Rd:226): Warning: <h3> anchor "Methods" already defined
TO_GeoJson.html:135:1 (TO_GeoJson.Rd:255): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:164:1 (TO_GeoJson.Rd:273): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:170:1 (TO_GeoJson.Rd:277): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:193:1 (TO_GeoJson.Rd:291): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:199:1 (TO_GeoJson.Rd:295): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:222:1 (TO_GeoJson.Rd:309): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:228:1 (TO_GeoJson.Rd:313): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:251:1 (TO_GeoJson.Rd:327): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:257:1 (TO_GeoJson.Rd:331): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:280:1 (TO_GeoJson.Rd:345): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:286:1 (TO_GeoJson.Rd:349): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:309:1 (TO_GeoJson.Rd:363): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:315:1 (TO_GeoJson.Rd:367): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:338:1 (TO_GeoJson.Rd:381): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:344:1 (TO_GeoJson.Rd:385): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:367:1 (TO_GeoJson.Rd:399): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:373:1 (TO_GeoJson.Rd:403): Warning: <h5> anchor "Arguments" already defined
TO_GeoJson.html:398:1 (TO_GeoJson.Rd:418): Warning: <h5> anchor "Usage" already defined
TO_GeoJson.html:404:1 (TO_GeoJson.Rd:422): Warning: <h5> anchor "Arguments" already defined
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
getPathRegion.html:50:1 (getPathRegion.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Karsten Donnay <kdonnay@gmx.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Karsten",
                      family = "Donnay",
                      role = c("aut", "cre"),
                      email = "kdonnay@gmx.net"),
               person(given = c("Andrew", "M."),
                      family = "Linke",
                      role = "aut"))
as necessary.
File ‘geometries/libs/geometries.so’:
  Found non-API call to R: ‘STRING_PTR’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following HTML validation problems:
feasible.point.html:58:1 (feasible.point.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
geomongo.html:82:1 (geomongo.Rd:99): Warning: <h3> anchor "Methods" already defined
geomongo.html:158:1 (geomongo.Rd:142): Warning: <h5> anchor "Usage" already defined
geomongo.html:172:1 (geomongo.Rd:151): Warning: <h5> anchor "Usage" already defined
geomongo.html:178:1 (geomongo.Rd:155): Warning: <h5> anchor "Arguments" already defined
geomongo.html:201:1 (geomongo.Rd:169): Warning: <h5> anchor "Usage" already defined
geomongo.html:213:1 (geomongo.Rd:179): Warning: <h5> anchor "Arguments" already defined
geomongo.html:242:1 (geomongo.Rd:199): Warning: <h5> anchor "Usage" already defined
geomongo.html:255:1 (geomongo.Rd:210): Warning: <h5> anchor "Arguments" already defined
geomongo.html:288:1 (geomongo.Rd:233): Warning: <h5> anchor "Usage" already defined
geomongo.html:294:1 (geomongo.Rd:237): Warning: <h5> anchor "Arguments" already defined
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘add_dimension.Rd’ ‘add_facts.Rd’ ‘define_geoattribute.Rd’
    ‘dimensional_query_run_geoquery.R’ ‘filter_dimension.Rd’
    ‘geomultistar_define_geoattribute.R’ ‘get_empty_geoinstances.Rd’
    ‘multistar_as_flat_table.Rd’ ‘relate_dimension.Rd’ ‘run_geoquery.Rd’
    ‘run_query.Rd’ ‘save_as_geopackage.Rd’ ‘select_dimension.Rd’
    ‘select_fact.Rd’
Maintainer: ‘Barry Rowlingson <b.rowlingson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Barry",
                    family = "Rowlingson",
                    role = c("aut", "cre"),
                    email = "b.rowlingson@gmail.com")
as necessary.
Found the following HTML validation problems:
download_gpkg.html:50:1 (download_gpkg.Rd:12): Warning: missing </ul> before </div>
download_gpkg_anp.html:50:1 (download_gpkg_anp.Rd:12): Warning: missing </ul> before </div>
load_gpkg.html:46:1 (load_gpkg.Rd:10): Warning: missing </ul> before </div>
select_data_level.html:50:1 (select_data_level.Rd:12): Warning: missing </ul> before </div>
select_data_type.html:50:1 (select_data_type.Rd:12): Warning: missing </ul> before </div>
select_metadata.html:52:1 (select_metadata.Rd:14): Warning: missing </ul> before </div>
select_metadata_anp.html:46:1 (select_metadata_anp.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mark A. Bell <mark.bell521@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mark", "A."),
                      family = "Bell.",
                      role = "aut",
                      email = "mark.bell521@gmail.com"),
               person(given = c("Mark", "A."),
                      family = "Bell",
                      role = "cre",
                      email = "mark.bell521@gmail.com"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘geoscale-package.Rd’:
    \keyword{time-series,plot}
  File ‘geoscaleBox.Rd’:
    \keyword{time-series,plot}
  File ‘geoscalePlot.Rd’:
    \keyword{time-series,plot}
Maintainer: ‘Shant Sukljian <asshtnt@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shant",
                    family = "Sukljian",
                    role = c("aut", "cre"),
                    email = "asshtnt@gmail.com")
as necessary.
Found the following HTML validation problems:
create_correlation_plots.html:50:1 (create_correlation_plots.Rd:12): Warning: missing </ul> before </div>
save_temporal_results.html:54:1 (save_temporal_results.Rd:14): Warning: missing </ul> before </div>
validate_method_compatibility.html:54:1 (validate_method_compatibility.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
geos_minimum_bounding_circle.html:66:1 (geos_minimum_bounding_circle.Rd:31): Warning: missing </ul> before </div>
vctrs-methods.html:48:1 (vctrs-methods.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Antoine Lucas <antoinelucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Antoine",
                    family = "Lucas",
                    role = c("aut", "cre"),
                    email = "antoinelucas@gmail.com")
as necessary.
Malformed Description field: should contain one or more complete sentences.
Found the following calls to data() loading into the global environment:
File ‘geotools/R/zzz.R’:
  data(fr_geo_rad)
See section ‘Good practice’ in ‘?data’.
Found the following HTML validation problems:
write.geotop.table.html:93:1 (write.geotop.table.Rd:39): Warning: missing </ul> before </div>
Maintainer: ‘Michael Robbins <mrobbins@rand.org>’

The Description field contains
  Robbins (2021) <arXiv:2008.02243>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
webTable.html:78:1 (webTable.Rd:30): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘J. Aravind [aut, cre] (<https://orcid.org/0000-0002-4791-442X>), S. Vimala Devi [aut], J. Radhamani [aut], Sherry Rachel Jacob [aut], Kalyani Srinivasan [aut], ICAR-NBGPR [cph] (www.nbpgr.ernet.in)’
  Authors@R: ‘J. Aravind [aut, cre] (ORCID: <https://orcid.org/0000-0002-4791-442X>), S. Vimala Devi [aut], J. Radhamani [aut], Sherry Rachel Jacob [aut], Kalyani Srinivasan [aut], ICAR-NBGPR [cph] (url: www.nbpgr.ernet.in)’
Found the following HTML validation problems:
plot.html:53:1 (plot.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
git_submodule.html:88:1 (git_submodule.Rd:43): Warning: missing </ul> before </div>
Maintainer: ‘Dandi Qiao <redaq@channing.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dandi",
                      family = "Qiao",
                      role = c("aut", "cre"),
                      email = "redaq@channing.harvard.edu"),
               person(given = c("Michael", "H."),
                      family = "Cho",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘query_gesla.R’ ‘query_gesla.Rd’ ‘write_gesla.Rd’
Maintainer: ‘Natalia Zemlianskaia <natasha.zemlianskaia@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Natalia",
                    family = "Zemlianskaia",
                    role = c("aut", "cre"),
                    email = "natasha.zemlianskaia@gmail.com")
as necessary.

The Description field contains
  details see Zemlianskaia et al. (2021) <arxiv:2103.13510>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) gesso.cv.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gesso.cv.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gesso.cv.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gesso.cv.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gesso.cv.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
Found the following HTML validation problems:
df2json.html:55:1 (df2json.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
function.ending.point.html:54:1 (function.ending.point.Rd:14): Warning: missing </ul> before </div>
translate.fn.calls.html:63:1 (translate.fn.calls.Rd:21): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gld_read_lattes_zip.R’
Maintainer: ‘Lerato E Magosi <magosil86@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zuguang Gu <z.gu@dkfz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zuguang",
                    family = "Gu",
                    role = c("aut", "cre"),
                    email = "z.gu@dkfz.de")
as necessary.
Maintainer: ‘Alexey Seleznev <selesnow@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexey",
                    family = "Seleznev",
                    role = c("aut", "cre"),
                    email = "selesnow@gmail.com")
as necessary.
Maintainer: ‘Marcelo S. Perlin <marceloperlin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Marcelo", "S."),
                    family = "Perlin",
                    role = c("aut", "cre"),
                    email = "marceloperlin@gmail.com")
as necessary.
Found the following HTML validation problems:
req_cache_getrad.html:84:1 (req_cache_getrad.Rd:35): Warning: missing </ul> before </div>
Found the following HTML validation problems:
is.curve_set.html:46:1 (is.curve_set.Rd:10): Warning: missing </ul> before </div>
plot.combined_fboxplot.html:88:1 (plot.combined_fboxplot.Rd:39): Warning: missing </ul> before </div>
print.GET_contingency.html:51:1 (print.GET_contingency.Rd:12): Warning: missing </ul> before </div>
print.combined_fboxplot.html:51:1 (print.combined_fboxplot.Rd:12): Warning: missing </ul> before </div>
print.combined_global_envelope.html:51:1 (print.combined_global_envelope.Rd:12): Warning: missing </ul> before </div>
print.curve_set.html:51:1 (print.curve_set.Rd:12): Warning: missing </ul> before </div>
print.deviation_test.html:51:1 (print.deviation_test.Rd:12): Warning: missing </ul> before </div>
print.fboxplot.html:51:1 (print.fboxplot.Rd:12): Warning: missing </ul> before </div>
print.fclust.html:51:1 (print.fclust.Rd:12): Warning: missing </ul> before </div>
print.fdr_envelope.html:51:1 (print.fdr_envelope.Rd:12): Warning: missing </ul> before </div>
print.global_envelope.html:51:1 (print.global_envelope.Rd:12): Warning: missing </ul> before </div>
rMatClustlpp.html:67:1 (rMatClustlpp.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Lerato E Magosi <magosil86@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Genaro Sucarrat <genaro.sucarrat@bi.no>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Genaro",
                      family = "Sucarrat",
                      role = c("aut", "cre"),
                      email = "genaro.sucarrat@bi.no"),
               person(given = "Felix",
                      family = "Pretis",
                      role = "aut"),
               person(given = "James",
                      family = "Reade",
                      role = "aut"),
               person(given = "Jonas",
                      family = "Kurle",
                      role = "ctb"),
               person(given = "Moritz",
                      family = "Schwarz",
                      role = "ctb"))
as necessary.
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dirk",
                    family = "Eddelbuettel",
                    role = c("aut", "cre"),
                    email = "edd@debian.org")
as necessary.
Maintainer: ‘Sydney Manning <sydney.manning@unthsc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhengyang",
                      family = "Zhou",
                      role = "aut"),
               person(given = "Sydney",
                      family = "Manning",
                      role = "cre",
                      email = "sydney.manning@unthsc.edu"))
as necessary.
Maintainer: ‘Alex J. Cannon <alex.cannon@canada.ca>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
gev.html:102:1 (gev.Rd:48): Warning: missing </ul> before </div>
Maintainer: ‘Ivan Bezerra Allaman <ivanalaman@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ivan", "Bezerra"),
                      family = "Allaman",
                      role = c("aut", "cre"),
                      email = "ivanalaman@gmail.com"),
               person(given = c("Jose", "Claudio"),
                      family = "Faria",
                      role = "aut",
                      email = "joseclaudio.faria@gmail.com"))
as necessary.
Maintainer: ‘Tino Werner <tino.werner1@uni-oldenburg.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  extract_gfc.Rd: writeRaster
  scale_by_pixel_area.Rd: dataType
  scale_toar.Rd: writeRaster
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
check_aoi.html:48:1 (check_aoi.Rd:11): Warning: missing </ul> before </div>
Maintainer: ‘Lukasz Smaga <ls@amu.edu.pl>’

The Description field contains
  <arXiv:2301.12009>). We can verify the global hypothesis about equality
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Sarah Friedrich <sarah.friedrich@math.uni-augsburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sarah",
                      family = "Friedrich",
                      role = c("aut", "cre"),
                      email = "sarah.friedrich@math.uni-augsburg.de"),
               person(given = "Frank",
                      family = "Konietschke",
                      role = "aut"),
               person(given = "Markus",
                      family = "Pauly",
                      role = "aut"),
               person(given = "Marc",
                      family = "Ditzhaus",
                      role = "aut"),
               person(given = "Philipp",
                      family = "Steinhauer",
                      role = "aut"))
as necessary.
checkRd: (-1) QANOVA.Rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) QANOVA.Rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) QANOVA.Rd:64-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) QANOVA.Rd:67: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Acero William <wfaceror@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Acero",
                      family = "William",
                      role = c("aut", "cre"),
                      email = "wfaceror@unal.edu.co"),
               person(given = "Gutierrez",
                      family = "Andres",
                      role = "aut",
                      email = "andres.gutierrez@un.org"),
               person(given = "Trujillo",
                      family = "Leonardo",
                      role = "aut",
                      email = "ltrujillo@unal.edu.co"))
as necessary.
Found the following HTML validation problems:
getWaternomicsData_NBS.html:50:1 (getWaternomicsData_NBS.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jia-Han Shih <tommy355097@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jia-Han",
                    family = "Shih",
                    role = c("aut", "cre"),
                    email = "tommy355097@gmail.com")
as necessary.
Found the following HTML validation problems:
GPareto.html:81:1 (GPareto.Rd:34): Warning: missing </ul> before </div>
Maintainer: ‘Hong Zhang <hzhang@wpi.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hong",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "hzhang@wpi.edu"),
               person(given = "Zheyang",
                      family = "Wu",
                      role = "aut"))
as necessary.

The Description field contains
  found in Hong Zhang and Zheyang Wu (2020) <arXiv:2003.01286>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) gfonts.Rd:8: Lost braces; missing escapes or markup?
     8 | Download Google fonts and generate CSS to use in {rmarkdown} documents and
       |                                                  ^
checkRd: (-1) gfonts.Rd:9: Lost braces; missing escapes or markup?
     9 | {shiny} applications. Some popular fonts are included and ready to use.
       | ^
checkRd: (-1) use_pkg_gfont.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Use a Google Font included in {gfonts}}
       |                                      ^
Found the following HTML validation problems:
simDataFullyObs.html:66:1 (simDataFullyObs.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
lazy_birdwatcher.html:57:1 (lazy_birdwatcher.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Mohamed Soudy <MohmedSoudy2009@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mohamed",
                    family = "Soudy",
                    role = c("aut", "cre"),
                    email = "mohmedsoudy2009@gmail.com")
as necessary.
Found the following HTML validation problems:
align_phylo.html:130:1 (align_phylo.Rd:67): Warning: missing </ul> before </div>
continuous_limits.html:52:1 (continuous_limits.Rd:11): Warning: missing </ul> before </div>
cross_none.html:77:1 (cross_none.Rd:33): Warning: missing </ul> before </div>
element_vec.html:127:1 (element_vec.Rd:54): Warning: missing </ul> before </div>
layout_expand.html:56:1 (layout_expand.Rd:15): Warning: missing </ul> before </div>
link_line.html:62:1 (link_line.Rd:24): Warning: missing </ul> before </div>
link_tetragon.html:63:1 (link_tetragon.Rd:25): Warning: missing </ul> before </div>
mark_line.html:61:1 (mark_line.Rd:23): Warning: missing </ul> before </div>
mark_tetragon.html:63:1 (mark_tetragon.Rd:25): Warning: missing </ul> before </div>
mark_triangle.html:79:1 (mark_triangle.Rd:34): Warning: missing </ul> before </div>
new_tune.html:64:1 (new_tune.Rd:17): Warning: missing </ul> before </div>
plot_ideogram.html:195:1 (plot_ideogram.Rd:100): Warning: missing </ul> before </div>
Found the following HTML validation problems:
NEWS.html:45:47 (NEWS.Rd:17): Warning: missing </p> before <a>
NEWS.html:45:5 (NEWS.Rd:17): Warning: missing </a> before <a>
NEWS.html:45:129 (NEWS.Rd:17): Warning: inserting implicit <p>
NEWS.html:45:133 (NEWS.Rd:17): Warning: discarding unexpected </a>
NEWS.html:45:47 (NEWS.Rd:17): Warning: trimming empty <p>
NEWS.html:45:129 (NEWS.Rd:17): Warning: trimming empty <p>
Found the following HTML validation problems:
add_ref_boxes.html:73:1 (add_ref_boxes.Rd:27): Warning: missing </ul> before </div>
add_ref_lines.html:58:1 (add_ref_lines.Rd:16): Warning: missing </ul> before </div>
brew_colors.html:46:1 (brew_colors.Rd:10): Warning: missing </ul> before </div>
get_x_axis_labels.html:50:1 (get_x_axis_labels.Rd:12): Warning: missing </ul> before </div>
is_date.html:46:1 (is_date.Rd:10): Warning: missing </ul> before </div>
mapping_color_to_fill.html:46:1 (mapping_color_to_fill.Rd:10): Warning: missing </ul> before </div>
plotting_data_type.html:46:1 (plotting_data_type.Rd:10): Warning: missing </ul> before </div>
print_if_interactive.html:46:1 (print_if_interactive.Rd:10): Warning: missing </ul> before </div>
rescale01.html:60:1 (rescale01.Rd:27): Warning: missing </ul> before </div>
str.ggmatrix.html:48:1 (str.ggmatrix.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
anim_save.html:67:1 (anim_save.Rd:20): Warning: missing </ul> before </div>
layer_type.html:50:1 (layer_type.Rd:17): Warning: missing </ul> before </div>
save_animation.html:51:1 (save_animation.Rd:12): Warning: missing </ul> before </div>
tween_before_stat.html:46:1 (tween_before_stat.Rd:10): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  geom_quasirandom.Rd: geom_boxplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘crime.Rd’ ‘get_SVD.Rd’ ‘ggscreeplot.Rd’ ‘reflect.Rd’
Found the following HTML validation problems:
dot-coordCorrection.html:100:1 (dot-coordCorrection.Rd:43): Warning: missing </ul> before </div>
dot-seekBrace.html:68:1 (dot-seekBrace.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
brick_row.html:78:1 (brick_row.Rd:30): Warning: missing </ul> before </div>
build_wall.html:62:1 (build_wall.Rd:18): Warning: missing </ul> before </div>
build_wall_waffle.html:62:1 (build_wall_waffle.Rd:18): Warning: missing </ul> before </div>
half_brick_row.html:73:1 (half_brick_row.Rd:27): Warning: missing </ul> before </div>
make_new_fill.html:54:1 (make_new_fill.Rd:14): Warning: missing </ul> before </div>
robust_random.html:50:1 (robust_random.Rd:12): Warning: missing </ul> before </div>
robust_round.html:50:1 (robust_round.Rd:12): Warning: missing </ul> before </div>
switch_pos.html:50:1 (switch_pos.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Jongbin Jung <me@jongbin.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jongbin",
                    family = "Jung",
                    role = c("aut", "cre"),
                    email = "me@jongbin.com")
as necessary.
Maintainer: ‘David Sjoberg <dav.sjob@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Sjoberg",
                    role = c("aut", "cre"),
                    email = "dav.sjob@gmail.com")
as necessary.
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ggbump)
  > 
  > test_check("ggbump")
  [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-numeric_inputs.R:17:3'): multiplication works ────────────────
  ... %>% class() not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-numeric_inputs.R:21:3'): multiplication works ────────────────
  ... %>% class() not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-numeric_inputs.R:26:3'): multiplication works ────────────────
  ... %>% class() not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  
  [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1 ]
  Error: Test failures
  Execution halted
Author field differs from that derived from Authors@R
  Author:    ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)’
  Authors@R: ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (ORCID: <https://orcid.org/0000-0003-1995-6531>, Twitter: @patilindrajeets)’
Maintainer: ‘Kyla Belisario <kyla_belisario@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kyla",
                    family = "Belisario",
                    role = c("aut", "cre"),
                    email = "kyla_belisario@protonmail.com")
as necessary.
Found the following HTML validation problems:
as.data.frame.tidy_dagitty.html:63:1 (as.data.frame.tidy_dagitty.Rd:20): Warning: missing </ul> before </div>
as.tbl.tidy_daggity.html:66:1 (as.tbl.tidy_daggity.Rd:23): Warning: missing </ul> before </div>
expand_plot.html:54:1 (expand_plot.Rd:16): Warning: missing </ul> before </div>
fortify.html:58:1 (fortify.Rd:18): Warning: missing </ul> before </div>
ggplot.tidy_dagitty.html:61:1 (ggplot.tidy_dagitty.Rd:20): Warning: missing </ul> before </div>
is.tidy_dagitty.html:46:1 (is.tidy_dagitty.Rd:10): Warning: missing </ul> before </div>
print.tidy_dagitty.html:51:1 (print.tidy_dagitty.Rd:12): Warning: missing </ul> before </div>
scale_adjusted.html:70:1 (scale_adjusted.Rd:19): Warning: missing </ul> before </div>
tbl_df.tidy_daggity.html:46:1 (tbl_df.tidy_daggity.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Neal Grantham <neal@nsgrantham.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Neal",
                    family = "Grantham",
                    role = c("aut", "cre"),
                    email = "neal@nsgrantham.com")
as necessary.
Running examples in ‘ggdark-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dark_mode
> ### Title: Activate dark mode on a 'ggplot2' theme
> ### Aliases: dark_mode
> 
> ### ** Examples
> 
> library(ggplot2)
> 
> p1 <- ggplot(iris, aes(Sepal.Width, Sepal.Length, color = Species)) +
+   geom_point()
> 
> p1  # theme returned by theme_get()
> p1 + dark_mode()  # activate dark mode on theme returned by theme_get()
Error in match(x, table, nomatch = 0L) : 
  'match' requires vector arguments
Calls: dark_mode -> %in%
Execution halted
Running ‘testthat.R’ [4s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ggdark)
  > 
  > test_check("ggdark")
  [ FAIL 1 | WARN 2 | SKIP 0 | PASS 0 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test_dark_mode.R:10:1'): (code run outside of `test_that()`) ────────
  Error in `match(x, table, nomatch = 0L)`: 'match' requires vector arguments
  Backtrace:
      ▆
   1. └─ggdark::dark_mode(light_theme) at test_dark_mode.R:10:1
   2.   └─geoms[["GeomPoint"]]$default_aes$colour %in% ...
  
  [ FAIL 1 | WARN 2 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted
Found the following HTML validation problems:
components.html:62:1 (components.Rd:31): Warning: missing </ul> before </div>
Found the following HTML validation problems:
rpartco.html:50:1 (rpartco.Rd:12): Warning: missing </ul> before </div>
treeco.html:50:1 (treeco.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ConvertChains.html:58:1 (ConvertChains.Rd:16): Warning: missing </ul> before </div>
DIC.html:52:1 (DIC.Rd:15): Warning: missing </ul> before </div>
GetPNames.html:46:1 (GetPNames.Rd:10): Warning: missing </ul> before </div>
StartNewsamples.html:141:1 (StartNewsamples.Rd:73): Warning: missing </ul> before </div>
check_pvec.html:50:1 (check_pvec.Rd:12): Warning: missing </ul> before </div>
dbeta_lu.html:66:1 (dbeta_lu.Rd:20): Warning: missing </ul> before </div>
dcauchy_l.html:58:1 (dcauchy_l.Rd:16): Warning: missing </ul> before </div>
dconstant.html:66:1 (dconstant.Rd:20): Warning: missing </ul> before </div>
deviance.model.html:53:1 (deviance.model.Rd:12): Warning: missing </ul> before </div>
dgamma_l.html:66:1 (dgamma_l.Rd:20): Warning: missing </ul> before </div>
dlnorm_l.html:66:1 (dlnorm_l.Rd:20): Warning: missing </ul> before </div>
iseffective.html:59:1 (iseffective.Rd:17): Warning: missing </ul> before </div>
isflat.html:73:1 (isflat.Rd:27): Warning: missing </ul> before </div>
isstuck.html:71:1 (isstuck.Rd:23): Warning: missing </ul> before </div>
mcmc_list.model.html:58:1 (mcmc_list.model.Rd:16): Warning: missing </ul> before </div>
random.html:59:1 (random.Rd:16): Warning: missing </ul> before </div>
summary_mcmc_list.html:54:1 (summary_mcmc_list.Rd:14): Warning: missing </ul> before </div>
unstick_one.html:50:1 (unstick_one.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
example_many_sequences.html:75:1 (example_many_sequences.Rd:23): Warning: missing </ul> before </div>
fastq_quality_scores.html:67:1 (fastq_quality_scores.Rd:14): Warning: missing </ul> before </div>
sequence_colour_palettes.html:65:1 (sequence_colour_palettes.Rd:18): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘girder_experiment.Rd’
Found the following HTML validation problems:
lazy_birdwatcher.html:57:1 (lazy_birdwatcher.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Lindsay Rutter <ggenealogypackage@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Lindsay",
                      family = "Rutter",
                      role = c("aut", "cre"),
                      email = "ggenealogypackage@gmail.com"),
               person(given = "Susan",
                      family = "Vanderplas",
                      role = "aut"),
               person(given = "Di",
                      family = "Cook",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
buildPathDF.html:67:1 (buildPathDF.Rd:16): Warning: missing </ul> before </div>
getPathOnly.html:70:1 (getPathOnly.Rd:20): Warning: missing </ul> before </div>
nodeToDF.html:61:1 (nodeToDF.Rd:16): Warning: missing </ul> before </div>
Found the following assignments to the global environment:
File ‘ggExtra/R/ggMarginalGadget.R’:
  assign(plotname, eval(parse(text = origPlot)), envir = .GlobalEnv)
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘geometrical_data_analysis.R’ ‘ggmca.Rd’ ‘ggmca_with_base_ref.Rd’
    ‘ggpca_3d.Rd’ ‘ggpca_cor_circle.Rd’ ‘pca_interpret.Rd’ ‘utils.R’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘lib.R’
Author field differs from that derived from Authors@R
  Author:    ‘Mikko Vihtakari [aut, cre] (Institute of Marine Research, <https://orcid.org/0000-0003-0371-4319>)’
  Authors@R: ‘Mikko Vihtakari [aut, cre] (affiliation: Institute of Marine Research, ORCID: <https://orcid.org/0000-0003-0371-4319>)’
Found the following HTML validation problems:
scale_unit.html:50:1 (scale_unit.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
interactive_layer_factory.html:47:1 (interactive_layer_factory.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
apply_grid.html:58:1 (apply_grid.Rd:16): Warning: missing </ul> before </div>
flatten.html:46:1 (flatten.Rd:10): Warning: missing </ul> before </div>
geom_confint.html:73:1 (geom_confint.Rd:27): Warning: missing </ul> before </div>
grid.draw.ggmultiplot.html:53:1 (grid.draw.ggmultiplot.Rd:13): Warning: missing </ul> before </div>
print-ggmultiplot-method.html:47:1 (print-ggmultiplot-method.Rd:10): Warning: missing </ul> before </div>
show-ggmultiplot-method.html:47:1 (show-ggmultiplot-method.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
theme_stamp.html:54:1 (theme_stamp.Rd:14): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘aaa.R’ ‘flip.R’ ‘geom_link.Rd’ ‘geom_seq.Rd’ ‘geom_seq_break.Rd’
    ‘shift.Rd’ ‘track_info.Rd’
Running examples in ‘gggenomes-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add_feats
> ### Title: Add different types of tracks
> ### Aliases: add_feats add_links add_subfeats add_sublinks add_clusters
> ###   add_tracks
> 
> ### ** Examples
> 
> # Add some repeat annotations
> gggenomes(seqs = emale_seqs) %>%
+   add_feats(repeats = emale_tirs) +
+   geom_seq() + geom_feat()
Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0.
ℹ Please use the `linewidth` argument instead.
ℹ The deprecated feature was likely used in the gggenomes package.
  Please report the issue at <https://github.com/thackl/gggenomes/issues>.
Error in UseMethod("add_feats") : 
  no applicable method for 'add_feats' applied to an object of class "NULL"
Calls: %>% -> add_feats
Execution halted
Found the following HTML validation problems:
theme_extensions.html:73:1 (theme_extensions.Rd:31): Warning: missing </ul> before </div>
Error(s) in re-building vignettes:
  ...
--- re-building ‘gghalves.Rmd’ using rmarkdown

Quitting from gghalves.Rmd:39-42 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'gghalves.Rmd' failed with diagnostics:
Problem while converting geom to grob.
ℹ Error occurred in the 1st layer.
Caused by error in `fun()`:
! argument "layout" is missing, with no default
--- failed re-building ‘gghalves.Rmd’

SUMMARY: processing the following file failed:
  ‘gghalves.Rmd’

Error: Vignette re-building failed.
Execution halted
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggheatmap_theme.Rd: theme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
geom_image_interactive.html:47:1 (geom_image_interactive.Rd:10): Warning: missing </ul> before </div>
geom_phylopic_interactive.html:47:1 (geom_phylopic_interactive.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
edit_layers.html:60:1 (edit_layers.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
addLabelDf.html:50:1 (addLabelDf.Rd:12): Warning: missing </ul> before </div>
coord_radar.html:54:1 (coord_radar.Rd:14): Warning: missing </ul> before </div>
makeEq.html:50:1 (makeEq.Rd:12): Warning: missing </ul> before </div>
model2df.html:54:1 (model2df.Rd:14): Warning: missing </ul> before </div>
myscale.html:46:1 (myscale.Rd:10): Warning: missing </ul> before </div>
myscale2.html:54:1 (myscale2.Rd:14): Warning: missing </ul> before </div>
newColName.html:46:1 (newColName.Rd:10): Warning: missing </ul> before </div>
num2factorDf.html:54:1 (num2factorDf.Rd:14): Warning: missing </ul> before </div>
p2chr.html:46:1 (p2chr.Rd:10): Warning: missing </ul> before </div>
palette2colors.html:50:1 (palette2colors.Rd:12): Warning: missing </ul> before </div>
pastecolon.html:46:1 (pastecolon.Rd:10): Warning: missing </ul> before </div>
pastecomma.html:46:1 (pastecomma.Rd:10): Warning: missing </ul> before </div>
subcolors.html:54:1 (subcolors.Rd:14): Warning: missing </ul> before </div>
theme_clean.html:46:1 (theme_clean.Rd:10): Warning: missing </ul> before </div>
theme_clean2.html:54:1 (theme_clean2.Rd:14): Warning: missing </ul> before </div>
unselectNumeric.html:54:1 (unselectNumeric.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ggiraph.html:49:1 (ggiraph.Rd:10): Warning: missing </ul> before </div>
ggiraphOutput.html:49:1 (ggiraphOutput.Rd:10): Warning: missing </ul> before </div>
renderGirafe.html:60:1 (renderGirafe.Rd:17): Warning: missing </ul> before </div>
renderggiraph.html:49:1 (renderggiraph.Rd:10): Warning: missing </ul> before </div>
run_girafe_example.html:48:1 (run_girafe_example.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘inset_shape_circle.R’ ‘inset_shape_rectangle.R’ ‘inset_shape_sf.R’
Maintainer: ‘Haley Jeppson <hjeppson@iastate.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/haleyjeppson/ggmosaic
which should likely be
  https://github.com/haleyjeppson/ggmosaic/issues
instead.
Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/ggmosaic.Rcheck/00install.out’ for details.
Maintainer: ‘Hugo Gasca-Aragon <hugo_gasca_aragon@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hugo",
                    family = "Gasca-Aragon",
                    role = c("aut", "cre"),
                    email = "hugo_gasca_aragon@hotmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ggmugs.R’
Found the following HTML validation problems:
coord_radar-deprecated.html:61:1 (coord_radar-deprecated.Rd:20): Warning: missing </ul> before </div>
get_scaledData.html:76:1 (get_scaledData.Rd:30): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ggnetwork.html:57:1 (ggnetwork.Rd:17): Warning: missing </ul> before </div>
theme_blank.html:55:1 (theme_blank.Rd:14): Warning: missing </ul> before </div>
theme_facet.html:55:1 (theme_facet.Rd:14): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Mikko Vihtakari [aut, cre] (Institute of Marine Research, <https://orcid.org/0000-0003-0371-4319>), Roger Bivand [ctb], Hadley Wickham [ctb]’
  Authors@R: ‘Mikko Vihtakari [aut, cre] (affiliation: Institute of Marine Research, ORCID: <https://orcid.org/0000-0003-0371-4319>), Roger Bivand [ctb], Hadley Wickham [ctb]’
Running ‘testthat.R’ [1s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(ggparallel)
  Loading required package: ggplot2
  > 
  > test_check("ggparallel")
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ggparallel.R:12:3'): ggparallel works ──────────────────────────
  Error in `UseMethod("ggplot_build")`: no applicable method for 'ggplot_build' applied to an object of class "c('gg', 'ggplot')"
  Backtrace:
      ▆
   1. └─ggplot2::ggplot_build(test_mtcars_plot) at test-ggparallel.R:12:3
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted
Found the following HTML validation problems:
get_predictions.html:60:1 (get_predictions.Rd:18): Warning: missing </ul> before </div>
makeContent.nodeplotgrob.html:47:1 (makeContent.nodeplotgrob.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ggpattern-defunct.html:85:1 (ggpattern-defunct.Rd:44): Warning: missing </ul> before </div>
checkRd: (-1) pcp_scale.Rd:50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) pcp_scale.Rd:51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) pcp_scale.Rd:52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) pcp_scale.Rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) pcp_scale.Rd:54-55: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
computeDistance.html:70:1 (computeDistance.Rd:21): Warning: missing </ul> before </div>
dot-addNodes.html:87:1 (dot-addNodes.Rd:33): Warning: missing </ul> before </div>
dot-restoreNames.html:91:1 (dot-restoreNames.Rd:43): Warning: missing </ul> before </div>
ggPedigree.core.html:159:1 (ggPedigree.core.Rd:75): Warning: missing </ul> before </div>
ggRelatednessMatrix.core.html:58:1 (ggRelatednessMatrix.core.Rd:15): Warning: missing </ul> before </div>
optimizePedigree.html:58:1 (optimizePedigree.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
get_period.html:46:1 (get_period.Rd:10): Warning: missing </ul> before </div>
is.periodic.html:46:1 (is.periodic.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
validate_abundance_data.html:50:1 (validate_abundance_data.Rd:12): Warning: missing </ul> before </div>
validate_group_sizes.html:51:1 (validate_group_sizes.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Yabing Song <songyb0519@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggdonut.Rd: geom_text_repel
  ggnestedpie.Rd: geom_text_repel
  ggpie.Rd: geom_text_repel
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
add_theme.html:55:1 (add_theme.Rd:15): Warning: missing </ul> before </div>
aes_auto.html:50:1 (aes_auto.Rd:12): Warning: missing </ul> before </div>
as.list.ggproto.html:68:1 (as.list.ggproto.Rd:23): Warning: missing </ul> before </div>
class_ggplot.html:112:1 (class_ggplot.Rd:51): Warning: missing </ul> before </div>
class_ggplot_built.html:62:1 (class_ggplot_built.Rd:16): Warning: missing </ul> before </div>
class_mapping.html:56:1 (class_mapping.Rd:14): Warning: missing </ul> before </div>
class_theme.html:61:1 (class_theme.Rd:17): Warning: missing </ul> before </div>
coord_munch.html:65:1 (coord_munch.Rd:20): Warning: missing </ul> before </div>
datetime_scale.html:271:1 (datetime_scale.Rd:152): Warning: missing </ul> before </div>
element_grob.html:52:1 (element_grob.Rd:13): Warning: missing </ul> before </div>
element_render.html:59:1 (element_render.Rd:16): Warning: missing </ul> before </div>
fortify.sp.html:80:1 (fortify.sp.Rd:35): Warning: missing </ul> before </div>
gg_dep.html:51:1 (gg_dep.Rd:13): Warning: missing </ul> before </div>
ggplotGrob.html:46:1 (ggplotGrob.Rd:10): Warning: missing </ul> before </div>
guide_none.html:54:1 (guide_none.Rd:16): Warning: missing </ul> before </div>
is_rel.html:46:1 (is_rel.Rd:10): Warning: missing </ul> before </div>
is_tests.html:89:1 (is_tests.Rd:73): Warning: missing </ul> before </div>
layer_sf.html:173:1 (layer_sf.Rd:97): Warning: missing </ul> before </div>
old_guide.html:61:1 (old_guide.Rd:25): Warning: missing </ul> before </div>
remove_missing.html:66:1 (remove_missing.Rd:18): Warning: missing </ul> before </div>
stat_manual.html:198:1 (stat_manual.Rd:193): Warning: <h3> anchor "Aesthetics" already defined
transform_position.html:51:1 (transform_position.Rd:13): Warning: missing </ul> before </div>
waiver.html:52:1 (waiver.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
textFunction.html:67:1 (textFunction.Rd:21): Warning: missing </ul> before </div>
Found the following HTML validation problems:
reverselog_trans.html:46:1 (reverselog_trans.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
check_shrink.html:46:1 (check_shrink.Rd:10): Warning: missing </ul> before </div>
pk_pd.html:46:1 (pk_pd.Rd:10): Warning: missing </ul> before </div>
pmx_manual_nm_import.html:62:1 (pmx_manual_nm_import.Rd:22): Warning: missing </ul> before </div>
pmx_register_plot.html:54:1 (pmx_register_plot.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
facet_share.html:125:1 (facet_share.Rd:71): Warning: missing </ul> before </div>
Found the following HTML validation problems:
these2logical.html:58:1 (these2logical.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
draw_prism_bracket.html:97:1 (draw_prism_bracket.Rd:45): Warning: missing </ul> before </div>
draw_prism_minor.html:89:1 (draw_prism_minor.Rd:39): Warning: missing </ul> before </div>
draw_prism_offset.html:84:1 (draw_prism_offset.Rd:36): Warning: missing </ul> before </div>
draw_prism_offset_minor.html:89:1 (draw_prism_offset_minor.Rd:39): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ggpubr-common-params.html:44:1 (ggpubr-common-params.Rd:11): Warning: missing </ul> before </div>
ggpubr_args.html:149:1 (ggpubr_args.Rd:76): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggplot2-ggproto.Rd: geom_jitter, geom_count, geom_bin2d, layer,
    geom_smooth, geom_quantile, geom_density_2d, geom_boxplot,
    geom_hex, geom_density2d
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
internal_extractors.html:57:1 (internal_extractors.Rd:18): Warning: missing </ul> before </div>
Maintainer: ‘Thomas Clarke <tclarke@jcvi.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
summary.ggrasp.html:51:1 (summary.ggrasp.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘reveal_aes.Rd’ ‘reveal_axis.Rd’ ‘reveal_groups.Rd’
    ‘reveal_layers.Rd’ ‘reveal_panels.Rd’ ‘reveal_save.Rd’
Found the following HTML validation problems:
netdata.coxph.html:194:1 (netdata.coxph.Rd:99): Warning: missing </ul> before </div>
netdata.crr.html:194:1 (netdata.crr.Rd:99): Warning: missing </ul> before </div>
netdata.glm.html:194:1 (netdata.glm.Rd:99): Warning: missing </ul> before </div>
netdata.randomFores.html:194:1 (netdata.randomFores.Rd:100): Warning: missing </ul> before </div>
netdata.scixgboot.html:194:1 (netdata.scixgboot.Rd:99): Warning: missing </ul> before </div>
netdata.svm.html:194:1 (netdata.svm.Rd:99): Warning: missing </ul> before </div>
Maintainer: ‘Athanasia Mo Mowinckel <a.m.mowinckel@psykologi.uio.no>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Athanasia Mo Mowinckel <a.m.mowinckel@psykologi.uio.no>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    * Changes all data options to .data to decrease possibility of column naming overlap
Maintainer: ‘Omar Wagih <omarwagih@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Omar",
                    family = "Wagih",
                    role = c("aut", "cre"),
                    email = "omarwagih@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggseqlogo.Rd: facet_wrap
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
list_col_schemes.html:46:1 (list_col_schemes.Rd:10): Warning: missing </ul> before </div>
list_fonts.html:46:1 (list_fonts.Rd:10): Warning: missing </ul> before </div>
theme_logo.html:50:1 (theme_logo.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as_ggside.html:68:1 (as_ggside.Rd:26): Warning: missing </ul> before </div>
geom_xsideabline.html:206:1 (geom_xsideabline.Rd:149): Warning: missing </ul> before </div>
ggside-ggproto-coord.html:64:1 (ggside-ggproto-coord.Rd:25): Warning: missing </ul> before </div>
ggside_geom.html:58:1 (ggside_geom.Rd:16): Warning: missing </ul> before </div>
ggside_layer.html:188:1 (ggside_layer.Rd:109): Warning: missing </ul> before </div>
ggside_layout.html:46:1 (ggside_layout.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Constantin Ahlmann-Eltze <artjom31415@googlemail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Author field differs from that derived from Authors@R
  Author:    ‘Constantin Ahlmann-Eltze [aut, cre, ctb] (<https://orcid.org/0000-0002-3762-068X>, @const_ae), Indrajeet Patil [aut, ctb] (<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)’
  Authors@R: ‘Constantin Ahlmann-Eltze [aut, cre, ctb] (ORCID: <https://orcid.org/0000-0002-3762-068X>, Twitter: @const_ae), Indrajeet Patil [aut, ctb] (ORCID: <https://orcid.org/0000-0003-1995-6531>, Twitter: @patilindrajeets)’
Maintainer: ‘Felipe Carvalho <lipecaso@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
apply_normalization.html:51:1 (apply_normalization.Rd:13): Warning: missing </ul> before </div>
check_idfactor_arg.html:55:1 (check_idfactor_arg.Rd:15): Warning: missing </ul> before </div>
subtitle_spct.generic_spct.html:65:1 (subtitle_spct.generic_spct.Rd:22): Warning: missing </ul> before </div>
title_spct.html:55:1 (title_spct.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
geom_histogramh.html:133:1 (geom_histogramh.Rd:79): Warning: missing </ul> before </div>
position-vertical.html:116:1 (position-vertical.Rd:67): Warning: missing </ul> before </div>
Found the following HTML validation problems:
scale_starshape.html:172:1 (scale_starshape.Rd:82): Warning: missing </ul> before </div>
starshape_pal.html:46:1 (starshape_pal.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
ggbetweenstats.html:582:1 (ggbetweenstats.Rd:317): Warning: <h4> anchor "between-subjects" already defined
ggbetweenstats.html:641:1 (ggbetweenstats.Rd:338): Warning: <h4> anchor "within-subjects" already defined
ggbetweenstats.html:718:1 (ggbetweenstats.Rd:371): Warning: <h4> anchor "between-subjects" already defined
ggbetweenstats.html:758:1 (ggbetweenstats.Rd:388): Warning: <h4> anchor "within-subjects" already defined
ggwithinstats.html:599:1 (ggwithinstats.Rd:326): Warning: <h4> anchor "between-subjects" already defined
ggwithinstats.html:658:1 (ggwithinstats.Rd:347): Warning: <h4> anchor "within-subjects" already defined
ggwithinstats.html:735:1 (ggwithinstats.Rd:380): Warning: <h4> anchor "between-subjects" already defined
ggwithinstats.html:775:1 (ggwithinstats.Rd:397): Warning: <h4> anchor "within-subjects" already defined
Found the following HTML validation problems:
ggcoef_multicomponents.html:240:1 (ggcoef_multicomponents.Rd:151): Warning: missing </ul> before </div>
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ggstream)
  > 
  > test_check("ggstream")
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-geom_stream.R:4:3'): geom_stream ─────────────────────────────
  class(...) not equal to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted
Maintainer: ‘Brittany Alexander <balexanderstatistics@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Brittany",
                    family = "Alexander",
                    role = c("aut", "cre"),
                    email = "balexanderstatistics@gmail.com")
as necessary.
Found the following HTML validation problems:
theme_white_f.html:52:1 (theme_white_f.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cnetplot.html:131:1 (cnetplot.Rd:69): Warning: missing </ul> before </div>
Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/ggtern.Rcheck/00install.out’ for details.
Author field differs from that derived from Authors@R
  Author:    ‘Claus O. Wilke [aut] (<https://orcid.org/0000-0002-7470-9261>), Brenton M. Wiernik [aut, cre] (<https://orcid.org/0000-0001-9560-6336>, @bmwiernik)’
  Authors@R: ‘Claus O. Wilke [aut] (ORCID: <https://orcid.org/0000-0002-7470-9261>), Brenton M. Wiernik [aut, cre] (ORCID: <https://orcid.org/0000-0001-9560-6336>, Twitter: @bmwiernik)’
Maintainer: ‘Calli Gross <ggthemeassist@icloud.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Calli",
                      family = "Gross",
                      role = c("aut", "cre"),
                      email = "ggthemeassist@icloud.com"),
               person(given = "Philipp",
                      family = "Ottolinger",
                      role = c("aut", "ctb")))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  geom_tufteboxplot.Rd: stat_boxplot, geom_boxplot
  scale_color_tableau.Rd: discrete_scale
  scale_colour_canva.Rd: discrete_scale
  theme_solid.Rd: theme
  theme_tufte.Rd: geom_rug
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
scale_colour_canva.html:56:1 (scale_colour_canva.Rd:19): Warning: missing </ul> before </div>
scale_stata.html:154:1 (scale_stata.Rd:77): Warning: missing </ul> before </div>
solarized_rebase.html:50:1 (solarized_rebase.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
grapes-plus-grapes.html:51:1 (grapes-plus-grapes.Rd:13): Warning: missing </ul> before </div>
Found the following HTML validation problems:
discretize.html:58:1 (discretize.Rd:17): Warning: missing </ul> before </div>
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    Win CRAN check results - R Windows
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘geom_donut.Rd’ ‘geom_donut_slice.Rd’ ‘geom_pie.Rd’
    ‘geom_series_circles.Rd’ ‘geom_series_text.Rd’ ‘geom_slice.Rd’
    ‘stat-series-circles.R’
checkRd: (-1) MODFIT.Rd:33: Lost braces; missing escapes or markup?
    33 |   {chisq_i = sum( (O_iz - E_iz)^2 / E_iz; z = 0, ..., C ), }
       |   ^
checkRd: (-1) probs.GGUM.Rd:27: Lost braces; missing escapes or markup?
    27 |   GUM-based probabilities just constrain alpha to a unit vector of length {I}
       |                                                                           ^
Found the following HTML validation problems:
combinations.html:46:1 (combinations.Rd:10): Warning: missing </ul> before </div>
plotData_add_venn.html:50:1 (plotData_add_venn.Rd:12): Warning: missing </ul> before </div>
print.html:56:1 (print.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Raymond L. Tremblay <raymondtremblay1@mac.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Raymond", ">"),
                      family = "Tremblay",
                      role = "aut"),
               person(given = c("Raymond", "L."),
                      family = "Tremblay",
                      role = "cre",
                      email = "raymondtremblay1@mac.com"))
as necessary.
'library' or 'require' calls not declared from:
  ‘nasaweather’ ‘tourr’
'data(package=)' call not declared from: ‘ggplot2’
Found the following HTML validation problems:
add_guide_axis.html:46:1 (add_guide_axis.Rd:10): Warning: missing </ul> before </div>
add_guide_legend.html:46:1 (add_guide_legend.Rd:10): Warning: missing </ul> before </div>
add_scale.html:55:1 (add_scale.Rd:15): Warning: missing </ul> before </div>
axis_props.html:79:1 (axis_props.Rd:30): Warning: missing </ul> before </div>
bin_vector.html:84:1 (bin_vector.Rd:36): Warning: missing </ul> before </div>
explain.ggvis.html:51:1 (explain.ggvis.Rd:12): Warning: missing </ul> before </div>
fullseq.html:54:1 (fullseq.Rd:14): Warning: missing </ul> before </div>
ggvisOutputElements.html:56:1 (ggvisOutputElements.Rd:15): Warning: missing </ul> before </div>
ggvis_message.html:59:1 (ggvis_message.Rd:16): Warning: missing </ul> before </div>
group_by.html:50:1 (group_by.Rd:13): Warning: missing </ul> before </div>
is.axis_props.html:46:1 (is.axis_props.Rd:10): Warning: missing </ul> before </div>
is.broker.html:46:1 (is.broker.Rd:10): Warning: missing </ul> before </div>
is.ggvis.html:46:1 (is.ggvis.Rd:10): Warning: missing </ul> before </div>
is.legend_props.html:46:1 (is.legend_props.Rd:10): Warning: missing </ul> before </div>
is.scaled_value.html:46:1 (is.scaled_value.Rd:10): Warning: missing </ul> before </div>
legend_props.html:72:1 (legend_props.Rd:27): Warning: missing </ul> before </div>
prop_domain.html:50:1 (prop_domain.Rd:12): Warning: missing </ul> before </div>
save_spec.html:56:1 (save_spec.Rd:17): Warning: missing </ul> before </div>
scaled_value.html:50:1 (scaled_value.Rd:12): Warning: missing </ul> before </div>
scaletype_to_vega_scaletype.html:46:1 (scaletype_to_vega_scaletype.Rd:10): Warning: missing </ul> before </div>
set_scale_label.html:54:1 (set_scale_label.Rd:14): Warning: missing </ul> before </div>
show_tooltip.html:60:1 (show_tooltip.Rd:19): Warning: missing </ul> before </div>
vega_data_parser.html:47:1 (vega_data_parser.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
power_trans.html:46:1 (power_trans.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Yuri Tani Utsunomiya <ytutsunomiya@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Yuri", "Tani"),
                      family = "Utsunomiya",
                      role = c("aut", "cre"),
                      email = "ytutsunomiya@gmail.com"),
               person(given = c("Andre", "Vieira", "do"),
                      family = "Nascimento",
                      role = "aut"),
               person(given = "Marco",
                      family = "Milanesi",
                      role = "aut"),
               person(given = "Mario",
                      family = "Barbato",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ancsvm.Rd: svm
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘annual.R’ ‘anomaly.R’ ‘coverage.R’ ‘daily.R’ ‘flags.R’
    ‘get-country-shapefile.R’ ‘monthly.R’ ‘quarterly.R’ ‘s3_classes.R’
    ‘stations.R’ ‘utils.R’
Found the following HTML validation problems:
country_codes.html:55:1 (country_codes.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Zihuai He <zihuai@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zihuai",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "zihuai@stanford.edu")
as necessary.
Maintainer: ‘Siyavash Shabani <s.shabani.aut@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Siyavash",
                      family = "Shabani",
                      role = c("aut", "cre"),
                      email = "s.shabani.aut@gmail.com"),
               person(given = "Reza",
                      family = "Rawassizadeh",
                      role = "aut"))
as necessary.
Maintainer: ‘Ashutosh Srivastava<srivas48@purdue.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ashutosh",
                      family = "Srivastava",
                      role = c("aut", "cre"),
                      email = "srivas48@purdue.edu"),
               person(given = "Anindya",
                      family = "Bhadra",
                      role = "aut",
                      email = "bhadra@purdue.edu"))
as necessary.

The Description field contains
  <arXiv:1707.06661>. The function uses matrix decomposition and variable
  <arXiv:1508.03884>. Structure of the graphical horseshoe function was
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Giona Casiraghi <giona@ethz.ch>’

The Description field contains
  Schweitzer, F. (2016) <arXiv:1607.02441>.  Casiraghi, G., Nanumyan, V.,
  Casiraghi, G., (2017) <arXiv:1702.02048> Brandenberger, L., Casiraghi,
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
Giac.html:99:1 (Giac.Rd:75): Warning: <h5> anchor "Usage" already defined
Giac.html:105:1 (Giac.Rd:79): Warning: <h5> anchor "Arguments" already defined
Giac.html:120:1 (Giac.Rd:88): Warning: <h5> anchor "Returns" already defined
Giac.html:151:1 (Giac.Rd:110): Warning: <h5> anchor "Usage" already defined
Giac.html:163:1 (Giac.Rd:120): Warning: <h5> anchor "Arguments" already defined
Giac.html:187:1 (Giac.Rd:138): Warning: <h5> anchor "Returns" already defined
Giac.html:194:1 (Giac.Rd:141): Warning: <h5> anchor "Examples" already defined
Giac.html:223:1 (Giac.Rd:165): Warning: <h5> anchor "Usage" already defined
Giac.html:229:1 (Giac.Rd:169): Warning: <h5> anchor "Returns" already defined
Found the following HTML validation problems:
check_giedata2input.html:98:1 (check_giedata2input.Rd:42): Warning: missing </ul> before </div>
check_giedatainput.html:98:1 (check_giedatainput.Rd:42): Warning: missing </ul> before </div>
check_gielistinginput.html:62:1 (check_gielistinginput.Rd:18): Warning: missing </ul> before </div>
check_gieunavinput.html:88:1 (check_gieunavinput.Rd:36): Warning: missing </ul> before </div>
construct_url.html:50:1 (construct_url.Rd:12): Warning: missing </ul> before </div>
extract_listelements.html:46:1 (extract_listelements.Rd:10): Warning: missing </ul> before </div>
gie_listinghierarchy.html:62:1 (gie_listinghierarchy.Rd:18): Warning: missing </ul> before </div>
is_response.html:46:1 (is_response.Rd:10): Warning: missing </ul> before </div>
parseresult.html:50:1 (parseresult.Rd:12): Warning: missing </ul> before </div>
send_getrequest.html:54:1 (send_getrequest.Rd:14): Warning: missing </ul> before </div>
setnull.html:50:1 (setnull.Rd:12): Warning: missing </ul> before </div>
try_GET.html:54:1 (try_GET.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Shiyun Lin <linshy27@mail2.sysu.edu.cn>’

The Description field contains
  <arXiv:1407.7819>. Secondly, a closed form solution for graphical lasso
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘John Muschelli <muschellij2@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "John",
                    family = "Muschelli",
                    role = c("aut", "cre"),
                    email = "muschellij2@gmail.com")
as necessary.
Found the following HTML validation problems:
writegii.html:60:1 (writegii.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Omar I. Elashkar <omar.ibrahim@miuegypt.edu.eg>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Omar", "I."),
                    family = "Elashkar",
                    role = c("aut", "cre"),
                    email = "omar.ibrahim@miuegypt.edu.eg")
as necessary.
Maintainer: ‘Michael Kleinsasser <mkleinsa@umich.edu>’

The Description field contains
  (2021) <arXiv:2102.10670>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) gigg.Rd:70-77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:81: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:82: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:84: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:85: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gigg.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Josef Leydold <josef.leydold@wu.ac.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Josef",
                      family = "Leydold",
                      role = c("aut", "cre"),
                      email = "josef.leydold@wu.ac.at"),
               person(given = "Wolfgang",
                      family = "Hormann",
                      role = "aut"))
as necessary.
Maintainer: ‘Robrecht Cannoodt <rcannood@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
plot_ssa.html:73:1 (plot_ssa.Rd:27): Warning: missing </ul> before </div>
print_ssa.html:54:1 (print_ssa.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cn_setup.html:55:1 (cn_setup.Rd:16): Warning: missing </ul> before </div>
ctrl_genes.html:55:1 (ctrl_genes.Rd:16): Warning: missing </ul> before </div>
encrypt_creds_path.html:46:1 (encrypt_creds_path.Rd:10): Warning: missing </ul> before </div>
gimap_stats.html:54:1 (gimap_stats.Rd:14): Warning: missing </ul> before </div>
tpm_setup.html:55:1 (tpm_setup.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
environmentSetup.html:48:1 (environmentSetup.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
setupConvolve.html:65:1 (setupConvolve.Rd:24): Warning: missing </ul> before </div>
setupDataLists.html:50:1 (setupDataLists.Rd:12): Warning: missing </ul> before </div>
setupPrepPaths.html:52:1 (setupPrepPaths.Rd:16): Warning: missing </ul> before </div>
setupTransformData.html:59:1 (setupTransformData.Rd:19): Warning: missing </ul> before </div>
Maintainer: ‘Han Zhang <zhangh.ustc@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Han",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zhangh.ustc@gmail.com"),
               person(given = "Kai",
                      family = "Yu",
                      role = "aut"))
as necessary.
Maintainer: ‘Dao Nguyen <dxnguyen@go.olemiss.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dao",
                      family = "Nguyen",
                      role = c("aut", "cre"),
                      email = "dxnguyen@go.olemiss.edu"),
               person(given = "Xin",
                      family = "Dang",
                      role = "aut"))
as necessary.

The Description field contains
  Nguyen, D., Chen, Y. and Zhang, J., (2018) <arXiv:1809.09793>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘rtgin1.R’
Maintainer: ‘Subhadip Datta <subhadipdatta007@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Subhadip",
                    family = "Datta",
                    role = c("aut", "cre"),
                    email = "subhadipdatta007@gmail.com")
as necessary.
Maintainer: ‘Anna Klimova <aklimova25@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Anna",
                      family = "Klimova",
                      role = c("aut", "cre"),
                      email = "aklimova25@gmail.com"),
               person(given = "Tamas",
                      family = "Rudas",
                      role = "aut"))
as necessary.
Maintainer: ‘Siddhanta Phuyal <siddhantaphuyal7159@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Siddhanta", "Phuyal", "Mamunur", "Rashid", "<mrashid@depauw.edu>", "Jyotirmoy", "Sarkar"),
                      family = "<jsarkar@iupui.edu>",
                      role = "aut",
                      email = "jsarkar@iupui.edu"),
               person(given = "Siddhanta",
                      family = "Phuyal",
                      role = "cre",
                      email = "siddhantaphuyal7159@gmail.com"))
as necessary.
Found the following HTML validation problems:
browse.html:50:1 (browse.Rd:12): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Thierry Onkelinx [aut, cre] (<https://orcid.org/0000-0001-8804-4216>, Research Institute for Nature and Forest (INBO)), Floris Vanderhaeghe [ctb] (<https://orcid.org/0000-0002-6378-6229>, Research Institute for Nature and Forest (INBO)), Peter Desmet [ctb] (<https://orcid.org/0000-0002-8442-8025>, Research Institute for Nature and Forest (INBO)), Els Lommelen [ctb] (<https://orcid.org/0000-0002-3481-5684>, Research Institute for Nature and Forest (INBO)), Research Institute for Nature and Forest (INBO) [cph, fnd]’
  Authors@R: ‘Thierry Onkelinx [aut, cre] (ORCID: <https://orcid.org/0000-0001-8804-4216>, affiliation: Research Institute for Nature and Forest (INBO)), Floris Vanderhaeghe [ctb] (ORCID: <https://orcid.org/0000-0002-6378-6229>, affiliation: Research Institute for Nature and Forest (INBO)), Peter Desmet [ctb] (ORCID: <https://orcid.org/0000-0002-8442-8025>, affiliation: Research Institute for Nature and Forest (INBO)), Els Lommelen [ctb] (ORCID: <https://orcid.org/0000-0002-3481-5684>, affiliation: Research Institute for Nature and Forest (INBO)), Research Institute for Nature and Forest (INBO) [cph, fnd]’
Found the following HTML validation problems:
find_records.html:59:1 (find_records.Rd:17): Warning: missing </ul> before </div>
set_database.html:54:1 (set_database.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
params.html:57:1 (params.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
is_verbose.html:46:1 (is_verbose.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘James S. Clark <jimclark@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("James", "S."),
                      family = "Clark",
                      role = c("aut", "cre"),
                      email = "jimclark@duke.edu"),
               person(given = "Daniel",
                      family = "Taylor-Rodriquez",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/gjam.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) gjamCensorY.Rd:27: Lost braces; missing escapes or markup?
    27 |   \item{\code{y}}{n by S matrix updated with censored {values} substituted for
       |                                                       ^
checkRd: (-1) gjamFillMissingTimes.Rd:32: Lost braces
    32 | Missing times in the data occur where there are gaps in \code{timeCol} column of \code{xdata} and the initial time \code{0} for each sequence.  New versions of the data have \code{NA} (\code{xdata}) or prior values with appropriate weight (\code{ydata}).  Missing times are filled in \code{xdata, ydata, edata}, including a time \code{0} which serves as a prior mean for \code{ydata} for time code{1}.  The group and time indices in columns \code{groupCol} and \code{timeCol} of \code{xdata} reference the time for a given time series.  Missing values in the columns \code{groupVars} of \code{xdata} are filled automatically filled in.  This assumes that values for these variables are fixed for the group.  If \code{FILLMEANS}, the missing  values in \code{ydata} are filled with means for the group and given a low weight specified in \code{missingEffort}.
       |                                                                                                                                                                                                                                                                                                                                                                                                              ^
Maintainer: ‘Thomas J. Leeper <thosjleeper@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Mike Beer <mbeer@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mahmoud",
                      family = "Ghandi",
                      role = "aut"),
               person(given = "Mike",
                      family = "Beer",
                      role = "cre",
                      email = "mbeer@jhu.edu"))
as necessary.
Found the following HTML validation problems:
Predict.matrix.gKRLS.smooth.html:53:1 (Predict.matrix.gKRLS.smooth.Rd:14): Warning: missing </ul> before </div>
create_sketched_kernel.html:58:1 (create_sketched_kernel.Rd:16): Warning: missing </ul> before </div>
mlr3_gKRLS.html:95:1 (mlr3_gKRLS.Rd:61): Warning: <h5> anchor "Usage" already defined
mlr3_gKRLS.html:115:1 (mlr3_gKRLS.Rd:74): Warning: <h3> anchor "Super-classes" already defined
mlr3_gKRLS.html:121:1 (mlr3_gKRLS.Rd:77): Warning: <h3> anchor "Methods" already defined
mlr3_gKRLS.html:125:1 (mlr3_gKRLS.Rd:78): Warning: <h4> anchor "Public-methods" already defined
mlr3_gKRLS.html:157:1 (mlr3_gKRLS.Rd:102): Warning: <h4> anchor "Method-+E2+80+98new+28+29+E2+80+99" already defined
mlr3_gKRLS.html:163:1 (mlr3_gKRLS.Rd:104): Warning: <h5> anchor "Usage" already defined
mlr3_gKRLS.html:173:1 (mlr3_gKRLS.Rd:112): Warning: <h4> anchor "Method-+E2+80+98clone+28+29+E2+80+99" already defined
mlr3_gKRLS.html:179:1 (mlr3_gKRLS.Rd:114): Warning: <h5> anchor "Usage" already defined
mlr3_gKRLS.html:185:1 (mlr3_gKRLS.Rd:118): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘Adam Lund <adam.lund@math.ku.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Adam",
                    family = "Lund",
                    role = c("aut", "cre"),
                    email = "adam.lund@math.ku.dk")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/glamlasso.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Marina Gomtsyan <marina.gomtsyan@agroparistech.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "M.",
                      family = "Gomtsyan",
                      role = "aut"),
               person(given = "C.",
                      family = "Levy-Leduc",
                      role = "aut"),
               person(given = "S.",
                      family = "Ouadah",
                      role = "aut"),
               person(given = "L.",
                      family = "Sansonnet",
                      role = "aut"),
               person(given = "Marina",
                      family = "Gomtsyan",
                      role = "cre",
                      email = "marina.gomtsyan@agroparistech.fr"))
as necessary.

The Description field contains
  (2020), <arXiv:2007.08623v1>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Julien Clavel <julien.clavel@hotmail.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Matyas", "A"),
                      family = "Sustik",
                      role = c("aut", "cph")),
               person(given = "Ben",
                      family = "Calderhead",
                      role = c("aut", "cph")),
               person(given = "Julien",
                      family = "Clavel",
                      role = c("com", "ctb", "cre"),
                      email = "julien.clavel@hotmail.fr"))
as necessary.
Maintainer: ‘Rob Tibshirani <tibs@stat.stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jerome",
                      family = "Friedman",
                      role = "aut"),
               person(given = "Trevor",
                      family = "Hastie",
                      role = "aut"),
               person(given = "Rob",
                      family = "Tibshirani",
                      role = c("aut", "cre"),
                      email = "tibs@stat.stanford.edu"))
as necessary.
Maintainer: ‘Ingmar Visser <i.visser@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ingmar",
                    family = "Visser",
                    role = c("aut", "cre"),
                    email = "i.visser@uva.nl")
as necessary.
Found the following significant warnings:
  calc_texture.cpp:209:46: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  calc_texture.cpp:209:84: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  calc_texture.cpp:221:41: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  calc_texture.cpp:230:42: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  calc_texture.cpp:230:77: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/glcm.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Found the following HTML validation problems:
print.gldrm.html:56:1 (print.gldrm.Rd:14): Warning: missing </ul> before </div>
print.gldrmCI.html:55:1 (print.gldrmCI.Rd:14): Warning: missing </ul> before </div>
print.gldrmLRT.html:56:1 (print.gldrmLRT.Rd:14): Warning: missing </ul> before </div>
Maintainer: ‘Michael Lim <michael626@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michael",
                      family = "Lim",
                      role = c("aut", "cre"),
                      email = "michael626@gmail.com"),
               person(given = "Trevor",
                      family = "Hastie",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
parameter_restriction.html:279:1 (parameter_restriction.Rd:343): Warning: missing </ul> before </div>
Maintainer: ‘David Duffy <David.Duffy@qimrberghofer.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "Duffy.", "C", "code", "in", "emgllmfitter", "by", "Andreas", "Borg"),
                      family = "<borg@imbei.uni-mainz.de>",
                      role = "aut",
                      email = "borg@imbei.uni-mainz.de"),
               person(given = "David",
                      family = "Duffy",
                      role = "cre",
                      email = "David.Duffy@qimrberghofer.edu.au"))
as necessary.
Maintainer: ‘Mark W. Donoghoe <markdonoghoe@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Chong Wu <wuxx0845@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chong",
                      family = "Wu",
                      role = c("aut", "cre"),
                      email = "wuxx0845@umn.edu"),
               person(given = "Wei",
                      family = "Pan",
                      role = "aut"))
as necessary.
Maintainer: ‘Charles J. Geyer <charlie@stat.umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Charles", "J."),
                      family = "Geyer.",
                      role = "aut",
                      email = "charlie@stat.umn.edu"),
               person(given = c("Charles", "J."),
                      family = "Geyer",
                      role = "cre",
                      email = "charlie@stat.umn.edu"))
as necessary.
checkRd: (-1) NEWS.Rd:16: Lost braces; missing escapes or markup?
    16 |         \item Now \code{AICc == Inf} when {n <= p + 1}.
       |                                           ^
Found the following HTML validation problems:
anova.html:51:1 (anova.Rd:12): Warning: missing </ul> before </div>
coef.html:55:1 (coef.Rd:14): Warning: missing </ul> before </div>
confint.glmcat.html:59:1 (confint.glmcat.Rd:16): Warning: missing </ul> before </div>
control_glmcat.html:54:1 (control_glmcat.Rd:14): Warning: missing </ul> before </div>
logLik.html:51:1 (logLik.Rd:12): Warning: missing </ul> before </div>
nobs.html:51:1 (nobs.Rd:12): Warning: missing </ul> before </div>
plot.html:51:1 (plot.Rd:12): Warning: missing </ul> before </div>
predict.html:63:1 (predict.Rd:20): Warning: missing </ul> before </div>
print.anova.html:55:1 (print.anova.Rd:14): Warning: missing </ul> before </div>
print.summary.glmcat.html:55:1 (print.summary.glmcat.Rd:14): Warning: missing </ul> before </div>
step.html:79:1 (step.Rd:16): Warning: missing </ul> before </div>
terms.html:51:1 (terms.Rd:12): Warning: missing </ul> before </div>
vcov.html:51:1 (vcov.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Sanjay Chaudhuri <sanjay@stat.nus.edu.sg>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) glmc.Rd:232: Escaped LaTeX specials: \&
checkRd: (-1) glmc.Rd:241: Escaped LaTeX specials: \&
checkRd: (-1) glmc.control.Rd:29: Escaped LaTeX specials: \$
checkRd: (-1) glmc.control.Rd:31: Escaped LaTeX specials: \$
checkRd: (-1) glmc.summaries.Rd:79: Escaped LaTeX specials: \&
Maintainer: ‘Canhong Wen <wencanhong@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Canhong",
                      family = "Wen",
                      role = c("aut", "cre"),
                      email = "wencanhong@gmail.com"),
               person(given = "Hao",
                      family = "Lin",
                      role = "aut"),
               person(given = "Xueqin",
                      family = "Wang",
                      role = "aut"))
as necessary.
Maintainer: ‘Matt P. Wand <matt.wand@uts.edu.au>’

The Description field contains
  Johnstone, Ormerod, Wand and Yu (2018) <arXiv:1805.08423v1>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) glmmSimData.Rd:4: Lost braces; missing escapes or markup?
     4 | \description{Section 4.1.2 of the refence below descries a simulation study with data generated from a probit mixed model with six fixed effects parameters and a bivariate random effects vector having a 2 by 2 symmetric positive definite covariance matrix. The function simulates a data set from this model with 2500 groups and the number of observation in each group being a random draw from {20,21,...,30}.}
       |                                                                                                                                                                                                                                                                                                                                                                                                          ^
Found the following HTML validation problems:
format_data.html:99:1 (format_data.Rd:43): Warning: missing </ul> before </div>
stan_pars.html:77:1 (stan_pars.Rd:31): Warning: missing </ul> before </div>
tidy.html:53:1 (tidy.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Andreas Groll <groll@statistik.tu-dortmund.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Groll",
                    role = c("aut", "cre"),
                    email = "groll@statistik.tu-dortmund.de")
as necessary.
'library' or 'require' calls not declared from:
  ‘MASS’ ‘nlme’
Found the following HTML validation problems:
survival_data.html:78:1 (survival_data.Rd:29): Warning: missing </ul> before </div>
Found the following HTML validation problems:
intDotplot.html:50:1 (intDotplot.Rd:12): Warning: missing </ul> before </div>
print.RRglmGOF.html:55:1 (print.RRglmGOF.Rd:14): Warning: missing </ul> before </div>
print.summary.RRglm.html:74:1 (print.summary.RRglm.Rd:27): Warning: missing </ul> before </div>
print.summary.RRglmerMod.html:74:1 (print.summary.RRglmerMod.Rd:27): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Sigma.html:48:1 (Sigma.Rd:11): Warning: missing </ul> before </div>
X.html:47:1 (X.Rd:11): Warning: missing </ul> before </div>
Y.html:48:1 (Y.Rd:11): Warning: missing </ul> before </div>
Z.html:48:1 (Z.Rd:11): Warning: missing </ul> before </div>
lipcancer_Sigma.html:48:1 (lipcancer_Sigma.Rd:11): Warning: missing </ul> before </div>
lipcancer_X.html:47:1 (lipcancer_X.Rd:11): Warning: missing </ul> before </div>
lipcancer_Y.html:47:1 (lipcancer_Y.Rd:11): Warning: missing </ul> before </div>
lipcancer_Z.html:48:1 (lipcancer_Z.Rd:11): Warning: missing </ul> before </div>
lipcancer_offset.html:47:1 (lipcancer_offset.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
dot-adjustX.html:58:1 (dot-adjustX.Rd:16): Warning: missing </ul> before </div>
dtruncated_nbinom2.html:74:1 (dtruncated_nbinom2.Rd:28): Warning: missing </ul> before </div>
formula.glmmTMB.html:59:1 (formula.glmmTMB.Rd:16): Warning: missing </ul> before </div>
glmmTMB_methods.html:76:1 (glmmTMB_methods.Rd:29): Warning: missing </ul> before </div>
gt_load.html:66:1 (gt_load.Rd:21): Warning: missing </ul> before </div>
mkTMBStruc.html:165:1 (mkTMBStruc.Rd:83): Warning: missing </ul> before </div>
print.VarCorr.glmmTMB.html:69:1 (print.VarCorr.glmmTMB.Rd:24): Warning: missing </ul> before </div>
set_simcodes.html:56:1 (set_simcodes.Rd:14): Warning: missing </ul> before </div>
startParams.html:102:1 (startParams.Rd:46): Warning: missing </ul> before </div>
summary.glmmTMB.html:72:1 (summary.glmmTMB.Rd:27): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cox_obj_function.html:71:1 (cox_obj_function.Rd:23): Warning: missing </ul> before </div>
dev_function.html:59:1 (dev_function.Rd:17): Warning: missing </ul> before </div>
get_eta.html:60:1 (get_eta.Rd:18): Warning: missing </ul> before </div>
mycoxph.html:57:1 (mycoxph.Rd:15): Warning: missing </ul> before </div>
mycoxpred.html:57:1 (mycoxpred.Rd:14): Warning: missing </ul> before </div>
obj_function.html:75:1 (obj_function.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Mee Young Park <meeyoung@google.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mee", "Young"),
                      family = "Park",
                      role = c("aut", "cre"),
                      email = "meeyoung@google.com"),
               person(given = "Trevor",
                      family = "Hastie",
                      role = "aut"))
as necessary.
Maintainer: ‘F. William Townes <will.townes@gmail.com>’

The Description field contains
  <arXiv:1907.02647>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘glmpca.Rd’:
    https://doi.org/10.1186/s13059-019-1861-6
Maintainer: ‘Benjamin E. Schlegel <kontakt@benjaminschlegel.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Benjamin", "E."),
                    family = "Schlegel",
                    role = c("aut", "cre"),
                    email = "kontakt@benjaminschlegel.ch")
as necessary.
Maintainer: ‘Peter K. Dunn <pdunn2@usc.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Peter", "K."),
                      family = "Dunn",
                      role = c("cre", "aut"),
                      email = "pdunn2@usc.edu.au"),
               person(given = c("Gordon", "K."),
                      family = "Smyth",
                      role = "aut"))
as necessary.
checkRd: (-1) ccancer.Rd:16: Lost braces
    16 |                          a factor with levels either \\code{F} (female) or code{M} (male)}
       |                                                            ^
checkRd: (-1) ccancer.Rd:16: Lost braces
    16 |                          a factor with levels either \\code{F} (female) or code{M} (male)}
       |                                                                                ^
checkRd: (-1) galapagos.Rd:4: Lost braces
     4 | \title{{Gal\'{a}pagos} Island species data}
       |              ^
checkRd: (-1) galapagos.Rd:6: Lost braces
     6 |   The number of species on the {Gal\'{a}pagos} Islands
       |                                ^
checkRd: (-1) galapagos.Rd:6: Lost braces
     6 |   The number of species on the {Gal\'{a}pagos} Islands
       |                                      ^
checkRd: (-1) galapagos.Rd:40: Lost braces
    40 |    {Gal\'{a}pagos} (the endemics). 
       |    ^
checkRd: (-1) galapagos.Rd:40: Lost braces
    40 |    {Gal\'{a}pagos} (the endemics). 
       |          ^
checkRd: (-1) galapagos.Rd:44: Lost braces
    44 |   Species number and endemism: The {Gal\'{a}pagos} Archipelago revisited.
       |                                          ^
Maintainer: ‘Greg McMahan <gmcmacran@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Greg",
                    family = "McMahan",
                    role = c("aut", "cre"),
                    email = "gmcmacran@gmail.com")
as necessary.
Found the following HTML validation problems:
setup_lambda.html:68:1 (setup_lambda.Rd:24): Warning: missing </ul> before </div>
Found the following HTML validation problems:
glance.glmgee.html:51:1 (glance.glmgee.Rd:12): Warning: missing </ul> before </div>
tidy.glmgee.html:74:1 (tidy.glmgee.Rd:27): Warning: missing </ul> before </div>
checkRd: (-1) coef.glmulti.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) coef.glmulti.Rd:27: Escaped LaTeX specials: \&
checkRd: (-1) coef.glmulti.Rd:51: Escaped LaTeX specials: \&
checkRd: (-1) coef.glmulti.Rd:60: Escaped LaTeX specials: \&
checkRd: (-1) coef.glmulti.Rd:61: Escaped LaTeX specials: \&
checkRd: (-1) consensus.Rd:29: Escaped LaTeX specials: \&
checkRd: (-1) getfit.Rd:14: Lost braces
    14 |   \item{object}{A fitted model object, of class \code{glm}, \code{lm} or code{glm.nb}}
       |                                                                              ^
checkRd: (-1) getfit.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) glmulti-class.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) glmulti-methods.Rd:14: Lost braces
    14 | code{glmulti} finds what are the \code{n} best models (the confidence set of models) among all possible models (the candidate set, as specified by the user).
       |     ^
checkRd: (-1) glmulti.Rd:99: Escaped LaTeX specials: \&
checkRd: (-1) summary.glmulti.Rd:72: Escaped LaTeX specials: \&
Maintainer: ‘Yi Yang <yi.yang6@mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ying",
                      family = "Nan",
                      role = "aut",
                      email = "nanx0006@gmail.com"),
               person(given = "Yanjia",
                      family = "Yu",
                      role = "aut",
                      email = "yuxxx748@umn.edu"),
               person(given = "Yi",
                      family = "Yang",
                      role = c("aut", "cre"),
                      email = "yi.yang6@mcgill.ca"),
               person(given = "Yuhong",
                      family = "Yang",
                      role = "aut",
                      email = "yyang@stat.umn.edu"))
as necessary.
Maintainer: ‘Zuguang Gu <z.gu@dkfz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zuguang",
                    family = "Gu",
                    role = c("aut", "cre"),
                    email = "z.gu@dkfz.de")
as necessary.
Maintainer: ‘Katharine Mullen <katharine.mullen@stat.ucla.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Katharine",
                    family = "Mullen",
                    role = c("aut", "cre"),
                    email = "katharine.mullen@stat.ucla.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Malformed Description field: should contain one or more complete sentences.
Found the following HTML validation problems:
cleanup.Globals.html:55:1 (cleanup.Globals.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Mary E. Savino <mary.savino@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("M.", "E."),
                      family = "Savino",
                      role = "aut"),
               person(given = c("Mary", "E."),
                      family = "Savino",
                      role = "cre",
                      email = "mary.savino@outlook.fr"))
as necessary.

The Description field contains
  Lévy-Leduc, C. (2023), <arXiv:2306.00686>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
knit_print.gloss.html:51:1 (knit_print.gloss.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Krzysztof Bartoszek <krzbar@protonmail.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Krzysztof",
                    family = "Bartoszek",
                    role = c("aut", "cre"),
                    email = "krzbar@protonmail.ch")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sergio Contador <scontador@ucm.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sergio",
                    family = "Contador",
                    role = c("aut", "cre"),
                    email = "scontador@ucm.es")
as necessary.
Maintainer: ‘Jiebiao Wang <randel.wang@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fan",
                      family = "Yang",
                      role = "aut"),
               person(given = "Jiebiao",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "randel.wang@gmail.com"),
               person(given = "Lin",
                      family = "Chen",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
accessors.html:60:1 (accessors.Rd:27): Warning: missing </ul> before </div>
as.character.mime.html:55:1 (as.character.mime.Rd:14): Warning: missing </ul> before </div>
checkRd: (-1) rtheta.Rd:50-76: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Osman Dag <osman.dag@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Osman",
                      family = "Dag",
                      role = c("aut", "cre"),
                      email = "osman.dag@outlook.com"),
               person(given = "Erdem",
                      family = "Karabulut",
                      role = "aut"),
               person(given = "Reha",
                      family = "Alpar",
                      role = "aut"),
               person(given = "Merve",
                      family = "Kasikci",
                      role = "ctb"))
as necessary.
Maintainer: ‘Osman Dag <osman.dag@hacettepe.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Osman",
                      family = "Dag",
                      role = c("aut", "cre"),
                      email = "osman.dag@hacettepe.edu.tr"),
               person(given = "Ceylan",
                      family = "Yozgatligil",
                      role = "aut"))
as necessary.
Maintainer: ‘Manuel Villacorta Tilve <mvt.oviedo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Manuel", "Villacorta"),
                    family = "Tilve",
                    role = c("aut", "cre"),
                    email = "mvt.oviedo@gmail.com")
as necessary.
Found the following HTML validation problems:
fun.svd_1.html:50:1 (fun.svd_1.Rd:12): Warning: missing </ul> before </div>
fun.svd_2.html:50:1 (fun.svd_2.Rd:12): Warning: missing </ul> before </div>
fun.svd_3.html:50:1 (fun.svd_3.Rd:12): Warning: missing </ul> before </div>
predict.neurona.html:51:1 (predict.neurona.Rd:12): Warning: missing </ul> before </div>
predict.svd.html:51:1 (predict.svd.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Herve Cardot <herve.cardot@u-bourgogne.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Herve",
                    family = "Cardot",
                    role = c("aut", "cre"),
                    email = "herve.cardot@u-bourgogne.fr")
as necessary.
Maintainer: ‘Andrea Martino <andrea.martino@polimi.it>’

The Description field contains
  Ieva, F. and Paganoni A. M. (2017) <arXiv:1708.00386>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
Gmisc-deprecated.html:46:1 (Gmisc-deprecated.Rd:12): Warning: missing </ul> before </div>
htmlTable_latex.html:61:1 (htmlTable_latex.Rd:21): Warning: missing </ul> before </div>
prPasteVec.html:47:1 (prPasteVec.Rd:10): Warning: missing </ul> before </div>
prTcPlotArrows.html:109:1 (prTcPlotArrows.Rd:49): Warning: missing </ul> before </div>
prTpGetBoxSizedTextGrob.html:73:1 (prTpGetBoxSizedTextGrob.Rd:27): Warning: missing </ul> before </div>
print.Gmisc_list_of_boxes.html:52:1 (print.Gmisc_list_of_boxes.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Charlie Wusuo Liu <liuwusuo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Charlie", "Wusuo"),
                    family = "Liu",
                    role = c("aut", "cre"),
                    email = "liuwusuo@gmail.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/GMKMcharlie.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Andreas Groll <groll@mathematik.uni-muenchen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Groll",
                    role = c("aut", "cre"),
                    email = "groll@mathematik.uni-muenchen.de")
as necessary.
Found the following HTML validation problems:
paraextract.html:46:1 (paraextract.Rd:11): Warning: missing </ul> before </div>
predict.html:46:1 (predict.Rd:11): Warning: missing </ul> before </div>
summary.html:46:1 (summary.Rd:11): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:137:1 (inst/NEWS.Rd:58): Warning: missing </ul> before </div>
NEWS.html:46:1 (inst/NEWS.Rd:16): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:76:1 (inst/NEWS.Rd:33): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:91:1 (inst/NEWS.Rd:42): Warning: <h4> anchor "FIXED-BUGS" already defined
NEWS.html:111:1 (inst/NEWS.Rd:50): Warning: <h4> anchor "NEW-FEATURES" already defined
Found the following HTML validation problems:
gFormula.html:81:1 (gFormula.Rd:31): Warning: missing </ul> before </div>
Found the following HTML validation problems:
mergeLists.html:50:1 (mergeLists.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stéphane",
                    family = "Laurent",
                    role = c("aut", "cre"),
                    email = "laurent_step@outlook.fr")
as necessary.
Maintainer: ‘Yaofang Hu <yaofang.hu@u.nus.edu>’

The Description field contains
  <arXiv:2006.03284>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Renfei Mao <renfeimao@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Renfei",
                    family = "Mao",
                    role = c("aut", "cre"),
                    email = "renfeimao@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘1-pitch-normalize-value.R’
Author field differs from that derived from Authors@R
  Author:    ‘Jan Philipp Dietrich [aut, cre] (Potsdam Institute for Climate Impact Research, <https://orcid.org/0000-0002-4309-6431>), David Klein [aut] (Potsdam Institute for Climate Impact Research), Anastasis Giannousakis [aut], Felicitas Beier [aut] (Potsdam Institute for Climate Impact Research), Johannes Koch [aut] (Potsdam Institute for Climate Impact Research), Lavinia Baumstark [aut] (Potsdam Institute for Climate Impact Research), Mika Pflüger [aut], Oliver Richters [aut] (Potsdam Institute for Climate Impact Research)’
  Authors@R: ‘Jan Philipp Dietrich [aut, cre] (affiliation: Potsdam Institute for Climate Impact Research, ORCID: <https://orcid.org/0000-0002-4309-6431>), David Klein [aut] (affiliation: Potsdam Institute for Climate Impact Research), Anastasis Giannousakis [aut], Felicitas Beier [aut] (affiliation: Potsdam Institute for Climate Impact Research), Johannes Koch [aut] (affiliation: Potsdam Institute for Climate Impact Research), Lavinia Baumstark [aut] (affiliation: Potsdam Institute for Climate Impact Research), Mika Pflüger [aut], Oliver Richters [aut] (affiliation: Potsdam Institute for Climate Impact Research)’
Found the following HTML validation problems:
print.hypotest.html:56:1 (print.hypotest.Rd:14): Warning: missing </ul> before </div>
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:291:1 (inst/NEWS.Rd:135): Warning: missing </ul> before </div>
NEWS.html:43:1 (inst/NEWS.Rd:15): Warning: <h4> anchor "NEW" already defined
NEWS.html:81:1 (inst/NEWS.Rd:33): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:128:1 (inst/NEWS.Rd:58): Warning: <h3> anchor "CHANGES-IN-+E2+80+98GNE+E2+80+99-VERSION-0.99-2" already defined
NEWS.html:132:1 (inst/NEWS.Rd:59): Warning: <h4> anchor "NOTE-FIXES" already defined
NEWS.html:150:1 (inst/NEWS.Rd:68): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:168:1 (inst/NEWS.Rd:77): Warning: <h4> anchor "BUG-FIXES" already defined
NEWS.html:189:1 (inst/NEWS.Rd:87): Warning: <h4> anchor "NEW" already defined
NEWS.html:249:1 (inst/NEWS.Rd:116): Warning: <h4> anchor "NEW-FEATURES" already defined
NEWS.html:261:1 (inst/NEWS.Rd:122): Warning: <h4> anchor "DEFUNC" already defined
NEWS.html:277:1 (inst/NEWS.Rd:131): Warning: <h4> anchor "NEW" already defined
Maintainer: ‘Ali Saeb <ali.saeb@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ali",
                    family = "Saeb",
                    role = c("aut", "cre"),
                    email = "ali.saeb@gmail.com")
as necessary.
Maintainer: ‘Maryclare Griffin <maryclaregriffin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Maryclare",
                    family = "Griffin",
                    role = c("aut", "cre"),
                    email = "maryclaregriffin@gmail.com")
as necessary.
Found the following HTML validation problems:
gnrs_core.html:63:1 (gnrs_core.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Annarosa Quarello <quarello.annarosa@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Annarosa",
                      family = "Quarello",
                      role = c("aut", "cre"),
                      email = "quarello.annarosa@gmail.com"),
               person(given = "Emilie",
                      family = "Lebarbier",
                      role = "aut"),
               person(given = "Olivier",
                      family = "Bock",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:2005.04683>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Karoly Antal <antalk2@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Karoly",
                      family = "Antal.",
                      role = "aut",
                      email = "antalk2@gmail.com"),
               person(given = "Karoly",
                      family = "Antal",
                      role = "cre",
                      email = "antalk2@gmail.com"))
as necessary.
Found the following HTML validation problems:
msg.html:47:1 (msg.Rd:11): Warning: missing </ul> before </div>
validateMatrices.html:91:1 (validateMatrices.Rd:43): Warning: missing </ul> before </div>
Found the following HTML validation problems:
goat_nulldistributions.html:47:1 (goat_nulldistributions.Rd:11): Warning: missing </ul> before </div>
Found the following HTML validation problems:
add_equation_single.html:58:1 (add_equation_single.Rd:16): Warning: missing </ul> before </div>
add_variable_single.html:58:1 (add_variable_single.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
print.goftime.html:53:1 (print.goftime.Rd:13): Warning: missing </ul> before </div>
Maintainer: ‘Eduardo García-Portugués <edgarcia@est-econ.uc3m.es>’

The BugReports field in DESCRIPTION has
  https://github.com/egarpor/goffda
which should likely be
  https://github.com/egarpor/goffda/issues
instead.
Maintainer: ‘Bruno Ebner <bruno.ebner@kit.edu>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘AD.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘BE.Rd’:
    https://doi.org/10.1007/s00184-019-00708-7
  File ‘CM.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘HME1.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘HME2.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘KS.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘WA.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘gamma_est.Rd’:
    https://doi.org/10.1080/00949650108812100
  File ‘test.AD.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘test.BE.Rd’:
    https://doi.org/10.1007/s00184-019-00708-7
  File ‘test.CM.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘test.HME1.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘test.HME2.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘test.KS.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
  File ‘test.WA.Rd’:
    https://doi.org/10.1080/03610926.2010.542851
Maintainer: ‘Jiwoong Kim <jwboys26@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jiwoong",
                    family = "Kim",
                    role = c("aut", "cre"),
                    email = "jwboys26atgmail.com")
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/GofKmt.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Elizabeth Gonzalez-Estrada <egonzalez@colpos.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Elizabeth",
                      family = "Gonzalez-Estrada",
                      role = c("aut", "cre"),
                      email = "egonzalez@colpos.mx"),
               person(given = c("Jose", "A."),
                      family = "Villasenor-Alva",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘cauchy.test.Rd’:
    https://doi.org/10.1080/00949655.2017.1404604
  File ‘de.test.Rd’:
    https://doi.org/10.1016/j.spl.2016.07.003
  File ‘ev.test.Rd’:
    https://doi.org/10.1080/00949655.2017.1404604
    https://doi.org/10.1080/03610910903528293
  File ‘gamma.fit.Rd’:
    http://dx.doi.org/10.1016/j.spl.2014.10.001
  File ‘gamma.test.Rd’:
    http://dx.doi.org/10.1016/j.spl.2014.10.001
  File ‘gp.fit.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.04.001
  File ‘gp.test.Rd’:
    http://dx.doi.org/10.1016/j.csda.2009.04.001
  File ‘ig.test.Rd’:
    http://dx.doi.org/10.1016/j.spl.2015.06.017
    https://doi.org/10.1007/s13571-017-0148-8
  File ‘mvShapiro.Test.Rd’:
    http://dx.doi.org/10.1080/03610920802474465
  File ‘normal.Rd’:
    http://dx.doi.org/10.1080/03610918.2013.810261
  File ‘sn.Rd’:
    https://doi.org/10.1080/00949655.2019.1658763
checkRd: (-1) BVDWSTOXX.Rd:14: Escaped LaTeX specials: \&
checkRd: (-1) BVDWSTOXX.Rd:15: Escaped LaTeX specials: \&
checkRd: (-1) BVDWSTOXX.Rd:16: Escaped LaTeX specials: \& \&
checkRd: (-1) BVDWSTOXX.Rd:26: Escaped LaTeX specials: \&
checkRd: (-1) BVDWSTOXX.Rd:31: Escaped LaTeX specials: \&
checkRd: (-1) BVDWSTOXX.Rd:34: Escaped LaTeX specials: \&
checkRd: (-1) BVDWSTOXX.Rd:37: Escaped LaTeX specials: \&
Found the following HTML validation problems:
addins.html:62:1 (addins.Rd:32): Warning: missing </ul> before </div>
Maintainer: ‘Michael B. Sohn <msohn@mail.med.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "B."),
                    family = "Sohn",
                    role = c("aut", "cre"),
                    email = "msohn@mail.med.upenn.edu")
as necessary.
Found the following HTML validation problems:
gomms.plot.html:64:1 (gomms.plot.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mohamed", "El", "Fodil"),
                    family = "Ihaddaden",
                    role = c("aut", "cre"),
                    email = "ihaddaden.fodeil@gmail.com")
as necessary.
Maintainer: ‘Kalifa Manjang <kalifamanjang1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kalifa",
                    family = "Manjang",
                    role = c("aut", "cre"),
                    email = "kalifamanjang1@gmail.com")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Mark Padgham [aut, cre] (<https://orcid.org/0000-0003-2172-5265>), Ascent Digital Services UK Limited [cph] (MangoTheCat), Karina Marks [aut] (KarinaMarks), Daniel de Bortoli [aut] (ddbortoli), Gabor Csardi [aut], Hannah Frick [aut], Owen Jones [aut] (owenjonesuob), Hannah Alexander [aut], Ana Simmons [ctb] (anasimmons), Fabian Scheipl [ctb] (fabian-s)’
  Authors@R: ‘Mark Padgham [aut, cre] (ORCID: <https://orcid.org/0000-0003-2172-5265>), Ascent Digital Services UK Limited [cph] (GitHub: MangoTheCat), Karina Marks [aut] (GitHub: KarinaMarks), Daniel de Bortoli [aut] (GitHub: ddbortoli), Gabor Csardi [aut], Hannah Frick [aut], Owen Jones [aut] (GitHub: owenjonesuob), Hannah Alexander [aut], Ana Simmons [ctb] (GitHub: anasimmons), Fabian Scheipl [ctb] (GitHub: fabian-s)’
Found the following HTML validation problems:
export_json.html:54:1 (export_json.Rd:14): Warning: missing </ul> before </div>
get_marker.html:50:1 (get_marker.Rd:12): Warning: missing </ul> before </div>
make_rcmd_check.html:74:1 (make_rcmd_check.Rd:28): Warning: missing </ul> before </div>
print.goodPractice.html:55:1 (print.goodPractice.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
parse_ga_account_summary.html:46:1 (parse_ga_account_summary.Rd:10): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gar_auth.Rd: Token-class
  gar_auto_auth.Rd: Token-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following HTML validation problems:
checkGoogleAPIError.html:46:1 (checkGoogleAPIError.Rd:10): Warning: missing </ul> before </div>
gar_scope_config.html:46:1 (gar_scope_config.Rd:10): Warning: missing </ul> before </div>
gar_token_info.html:46:1 (gar_token_info.Rd:10): Warning: missing </ul> before </div>
retryRequest.html:46:1 (retryRequest.Rd:10): Warning: missing </ul> before </div>
skip_if_no_env_auth.html:46:1 (skip_if_no_env_auth.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Mark Edmondson <r@sunholo.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
drive_empty_trash.html:51:1 (drive_empty_trash.Rd:15): Warning: missing </ul> before </div>
Maintainer: ‘Daniel Schmeh <danielschmeh@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Schmeh",
                    role = c("aut", "cre"),
                    email = "danielschmeh@gmail.com")
as necessary.
Found the following HTML validation problems:
gl_talk_languages.html:46:1 (gl_talk_languages.Rd:10): Warning: missing </ul> before </div>
gl_talk_shiny.html:115:1 (gl_talk_shiny.Rd:50): Warning: missing </ul> before </div>
my_message.html:50:1 (my_message.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘George Vega Yon <g.vegayon@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: publicdata.google.com
    From: man/dspl.Rd
Found the following HTML validation problems:
googler_.html:86:1 (googler_.Rd:32): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gt_make_grid.Rd’
checkRd: (-1) google_find_place.Rd:67: Lost braces in \itemize; meant \describe ?
checkRd: (-1) google_find_place.Rd:68: Lost braces in \itemize; meant \describe ?
checkRd: (-1) google_find_place.Rd:69: Lost braces in \itemize; meant \describe ?
checkRd: (-1) google_map.Rd:54: Lost braces; missing escapes or markup?
    54 | of `{sf}` objects).}
       |     ^
Found the following HTML validation problems:
add_circles.html:224:1 (add_circles.Rd:135): Warning: <h3> anchor "palette" already defined
add_dragdrop.html:47:1 (add_dragdrop.Rd:10): Warning: missing </ul> before </div>
add_polygons.html:225:1 (add_polygons.Rd:167): Warning: <h3> anchor "palette" already defined
add_polylines.html:209:1 (add_polylines.Rd:134): Warning: <h3> anchor "palette" already defined
add_rectangles.html:222:1 (add_rectangles.Rd:133): Warning: <h3> anchor "palette" already defined
clear_bounds.html:46:1 (clear_bounds.Rd:10): Warning: missing </ul> before </div>
clear_search.html:46:1 (clear_search.Rd:10): Warning: missing </ul> before </div>
google_map_view.html:57:1 (google_map_view.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Wencke Walter <wencke.walter@arcor.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jie Zhou <zhoujie02569@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jie",
                      family = "Zhou",
                      role = c("aut", "cre"),
                      email = "zhoujie02569@gmail.com"),
               person(given = "Jiajia",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Wenbin",
                      family = "Lu",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘GORCure-package.Rd’:
    \keyword{ package, linear transformation model, mi [TRUNCATED]
Found the following HTML validation problems:
plot.predict.GORMC.html:57:1 (plot.predict.GORMC.Rd:18): Warning: missing </ul> before </div>
summary.GORMC.html:59:1 (summary.GORMC.Rd:20): Warning: missing </ul> before </div>
Found the following HTML validation problems:
gotop-dependencies.html:46:1 (gotop-dependencies.Rd:10): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘collections.R’ ‘packages.R’ ‘published.R’ ‘related.R’ ‘utils.R’
Found the following HTML validation problems:
next_req.html:50:1 (next_req.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Yuichiro Otani <yuichiro@otani.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yuichiro",
                    family = "Otani",
                    role = c("aut", "cre"),
                    email = "yuichiro@otani.co")
as necessary.

The Description field contains
  (http://statdb.nstac.go.jp/)
Please enclose URLs in angle brackets (<...>).
Malformed Description field: should contain one or more complete sentences.
Found the following HTML validation problems:
gp-method.html:47:1 (gp-method.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
GPModel_shared_params.html:783:1 (GPModel_shared_params.Rd:421): Warning: missing </ul> before </div>
Author field differs from that derived from Authors@R
  Author:    ‘Naeem Khoshnevis [aut] (<https://orcid.org/0000-0003-4315-1426>, HUIT), Boyu Ren [aut, cre] (<https://orcid.org/0000-0002-5300-1184>, McLean Hospital), Tanujit Dey [ctb] (<https://orcid.org/0000-0001-5559-211X>, HMS), Danielle Braun [aut] (<https://orcid.org/0000-0002-5177-8598>, HSPH)’
  Authors@R: ‘Naeem Khoshnevis [aut] (ORCID: <https://orcid.org/0000-0003-4315-1426>, AFFILIATION: HUIT), Boyu Ren [aut, cre] (ORCID: <https://orcid.org/0000-0002-5300-1184>, AFFILIATION: McLean Hospital), Tanujit Dey [ctb] (ORCID: <https://orcid.org/0000-0001-5559-211X>, AFFILIATION: HMS), Danielle Braun [aut] (ORCID: <https://orcid.org/0000-0002-5177-8598>, AFFILIATION: HSPH)’
Maintainer: ‘Evandro Konzen <gpfda.r@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jian", "Qing"),
                      family = "Shi",
                      role = "aut"),
               person(given = "Yafeng",
                      family = "Cheng",
                      role = "aut"),
               person(given = "Evandro",
                      family = "Konzen",
                      role = c("aut", "cre"),
                      email = "gpfda.r@gmail.com"))
as necessary.
Found the following HTML validation problems:
condition_number.html:46:1 (condition_number.Rd:10): Warning: missing </ul> before </div>
expit.html:48:1 (expit.Rd:13): Warning: missing </ul> before </div>
fisher_scoring.html:73:1 (fisher_scoring.Rd:27): Warning: missing </ul> before </div>
get_linkfun.html:46:1 (get_linkfun.Rd:10): Warning: missing </ul> before </div>
get_penalty.html:58:1 (get_penalty.Rd:16): Warning: missing </ul> before </div>
get_start_parms.html:58:1 (get_start_parms.Rd:16): Warning: missing </ul> before </div>
pen_hi.html:58:1 (pen_hi.Rd:20): Warning: missing </ul> before </div>
pen_lo.html:58:1 (pen_lo.Rd:20): Warning: missing </ul> before </div>
pen_loglo.html:58:1 (pen_loglo.Rd:20): Warning: missing </ul> before </div>
sph_grad_xyz.html:51:1 (sph_grad_xyz.Rd:13): Warning: missing </ul> before </div>
summary.GpGp_fit.html:52:1 (summary.GpGp_fit.Rd:13): Warning: missing </ul> before </div>
test_likelihood_object.html:46:1 (test_likelihood_object.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Prabhanjan Tattar <prabhanjannt@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Prabhanjan",
                    family = "Tattar",
                    role = c("aut", "cre"),
                    email = "prabhanjannt@gmail.com")
as necessary.
Maintainer: ‘Xiang Li <ynaulx@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiang",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "ynaulx@gmail.com")
as necessary.
Maintainer: ‘Marlene Mueller <marlene.mueller@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marlene",
                    family = "Mueller",
                    role = c("aut", "cre"),
                    email = "marlene.mueller@gmx.de")
as necessary.
Found the following HTML validation problems:
add_sim_bound.html:70:1 (add_sim_bound.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Cyprien Mbogning <cyprien.mbogning@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cyprien",
                      family = "Mbogning",
                      role = c("aut", "cre"),
                      email = "cyprien.mbogning@inserm.fr"),
               person(given = "Wilson",
                      family = "Toussile",
                      role = "aut"))
as necessary.
Maintainer: ‘Arne B. Gjuvsland <arne.gjuvsland@nmbu.no>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Arne", "B."),
                      family = "Gjuvsland",
                      role = c("aut", "cre"),
                      email = "arne.gjuvsland@nmbu.no"),
               person(given = "Yunpeng",
                      family = "Wang",
                      role = "aut",
                      email = "yunpeng.wng@gmail.com"))
as necessary.
419,427d418
< Warning: `aes_string()` was deprecated in ggplot2 3.0.0.
< ℹ Please use tidy evaluation idioms with `aes()`.
< ℹ See also `vignette("ggplot2-in-packages")` for more information.
< ℹ The deprecated feature was likely used in the gpmap package.
<   Please report the issue to the authors.
< Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
< ℹ Please use `linewidth` instead.
< ℹ The deprecated feature was likely used in the gpmap package.
<   Please report the issue to the authors.
Running ‘genotype_test.R’ [1s/1s]
  Comparing ‘genotype_test.Rout’ to ‘genotype_test.Rout.save’ ... OK
  Running ‘test_code_example.R’ [3s/3s]
  Comparing ‘test_code_example.Rout’ to ‘test_code_example.Rout.save’ ...27,36d26
< Warning messages:
< 1: `aes_string()` was deprecated in ggplot2 3.0.0.
< ℹ Please use tidy evaluation idioms with `aes()`.
< ℹ See also `vignette("ggplot2-in-packages")` for more information.
< ℹ The deprecated feature was likely used in the gpmap package.
<   Please report the issue to the authors. 
< 2: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
< ℹ Please use `linewidth` instead.
< ℹ The deprecated feature was likely used in the gpmap package.
<   Please report the issue to the authors.
Maintainer: ‘Ramin Bostanabad <bostanabad@u.northwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ramin",
                      family = "Bostanabad",
                      role = c("aut", "cre"),
                      email = "bostanabad@u.northwestern.edu"),
               person(given = "Tucker",
                      family = "Kearney",
                      role = "aut"),
               person(given = "Siyo",
                      family = "Tao",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Apley",
                      role = "aut"),
               person(given = "Wei",
                      family = "Chen",
                      role = "aut",
                      comment = "IDEAL"))
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/GPM.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
checkRd: (-1) Auxil.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Auxil.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Auxil.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Auxil.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Fit.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Fit.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Fit.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Fit.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Fit.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Predict.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Predict.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Predict.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
'LinkingTo' field is unused: package has no 'src' directory
Running ‘testthat.R’ [255s/290s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > library(testthat)
  > library(gppm)
  > 
  > test_check("gppm")
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78892,188.845]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78892,188.845]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78892,188.845]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78892,188.845]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.79006,188.851]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78778,188.84]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78672,188.909]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.79111,188.782]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78997,189.018]
  
  [0.0101107,0.0101107,0.0101107,0.0101107,0.0101107,6.78786,188.673]
  
  [0.0111107,0.0111107,0.0111107,0.0111107,0.0111107,6.78992,188.846]
  
  [0.00911071,0.00911071,0.00911071,0.00911071,0.00911071,6.78792,188.844]
  
  [ FAIL 2 | WARN 0 | SKIP 6 | PASS 1808 ]
  
  ══ Skipped tests (6) ═══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-cv.R:26:3', 'test-fit.R:17:3', 'test-fit.R:25:3',
    'test-predict.R:21:3', 'test-predict.R:60:3', 'test-predict.R:69:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-plotLong.R:4:3'): simple ─────────────────────────────────────
  class(thePlot) not identical to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  ── Failure ('test-plotLong.R:9:3'): select all arguments ───────────────────────
  class(thePlot) not identical to c("gg", "ggplot").
  Lengths differ: 5 is not 2
  
  [ FAIL 2 | WARN 0 | SKIP 6 | PASS 1808 ]
  Error: Test failures
  Execution halted
Maintainer: ‘Ali Ghanbari <a.ghanbari541@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Parinaz",
                      family = "Mehdipour",
                      role = "aut",
                      email = "mehdipoor.p@gmail.com"),
               person(given = "Ali",
                      family = "Ghanbari",
                      role = c("cre", "aut"),
                      email = "a.ghanbari541@gmail.com"),
               person(given = "Iman",
                      family = "Navidi",
                      role = "aut",
                      email = "iman.navidi.1988@gmail.com"),
               person(given = "Farshad",
                      family = "Farzadfar",
                      role = "cph",
                      email = "farzadfar3@yahoo.com"))
as necessary.
Maintainer: ‘Liis Kolberg <liis.kolberg@ut.ee>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Liis",
                      family = "Kolberg",
                      role = c("aut", "cre"),
                      email = "liis.kolberg@ut.ee"),
               person(given = "Uku",
                      family = "Raudvere",
                      role = "aut",
                      email = "uku.raudvere@ut.ee"))
as necessary.
Found the following HTML validation problems:
set_base_url.html:47:1 (set_base_url.Rd:10): Warning: missing </ul> before </div>
set_tls_version.html:46:1 (set_tls_version.Rd:10): Warning: missing </ul> before </div>
set_user_agent.html:51:1 (set_user_agent.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Ivan Kuzmin <ivan.kuzmin@ut.ee>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Juri",
                      family = "Reimand",
                      role = "aut",
                      email = "juri.reimand@ut.ee"),
               person(given = "Raivo",
                      family = "Kolde",
                      role = "aut",
                      email = "rkolde@gmail.com"),
               person(given = "Tambet",
                      family = "Arak",
                      role = "aut",
                      email = "tambet.arak@gmail.com"),
               person(given = "Ivan",
                      family = "Kuzmin",
                      role = "cre",
                      email = "ivan.kuzmin@ut.ee"))
as necessary.
Found the following HTML validation problems:
set_base_url.html:47:1 (set_base_url.Rd:10): Warning: missing </ul> before </div>
set_tls_version.html:46:1 (set_tls_version.Rd:10): Warning: missing </ul> before </div>
set_user_agent.html:51:1 (set_user_agent.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Justin Clapp <justin.clapp@wyo.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Clapp",
                      role = "aut"),
               person(given = "J.",
                      family = "G.",
                      role = "aut"),
               person(given = "Justin",
                      family = "Clapp",
                      role = "cre",
                      email = "justin.clapp@wyo.gov"))
as necessary.
Maintainer: ‘Zheyuan Li <zheyuan.li@bath.edu>’

The Description field contains
  difference penalty, proposed by Li and Cao (2022) <arXiv:2201.06808>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
run_mcmc.html:168:1 (run_mcmc.Rd:84): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘service-cohere.R’
Found the following HTML validation problems:
OpenaiStreamParser.html:185:1 (OpenaiStreamParser.Rd:103): Warning: missing </ul> before </div>
OpenaiStreamParser.html:133:1 (OpenaiStreamParser.Rd:75): Warning: <h5> anchor "Usage" already defined
OpenaiStreamParser.html:139:1 (OpenaiStreamParser.Rd:79): Warning: <h5> anchor "Arguments" already defined
OpenaiStreamParser.html:162:1 (OpenaiStreamParser.Rd:92): Warning: <h5> anchor "Usage" already defined
OpenaiStreamParser.html:168:1 (OpenaiStreamParser.Rd:96): Warning: <h5> anchor "Arguments" already defined
mod_app_server.html:50:1 (mod_app_server.Rd:12): Warning: missing </ul> before </div>
mod_app_ui.html:50:1 (mod_app_ui.Rd:12): Warning: missing </ul> before </div>
mod_chat_server.html:64:1 (mod_chat_server.Rd:22): Warning: missing </ul> before </div>
mod_chat_ui.html:50:1 (mod_chat_ui.Rd:12): Warning: missing </ul> before </div>
streamingMessage-shiny.html:68:1 (streamingMessage-shiny.Rd:25): Warning: missing </ul> before </div>
streamingMessage.html:62:1 (streamingMessage.Rd:21): Warning: missing </ul> before </div>
welcomeMessage-shiny.html:68:1 (welcomeMessage-shiny.Rd:25): Warning: missing </ul> before </div>
welcomeMessage.html:67:1 (welcomeMessage.Rd:24): Warning: missing </ul> before </div>
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  LR_GradientConjugate_gpumatrix.Rd: Matrix-class
  gpu.matrix-class.Rd: Matrix-class
  gpu.matrix.Rd: Matrix-class
  matrix-product.Rd: %&%
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Ruoyong Xu <ruoyong.xu@mail.utoronto.ca>’

Found the following (possibly) invalid URLs:
  URL: https://app.gitter.im/#/room/#cdeterman_gpuR:gitter.im
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment
  URL: https://app.gitter.im/#/room/#cdeterman_gpuR_Tested_GPUs:gitter.im
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment
  URL: https://app.gitter.im/#/room/#cdeterman_gpuR_development:gitter.im
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment
  URL: https://app.gitter.im/#/room/#cdeterman_gpuR_general:gitter.im
    From: README.md
    Message: Invalid URL: '#' not allowed in fragment

The BugReports field in DESCRIPTION has
  https://github.com/cdeterman/gpuR/issues/new
which should likely be
  https://github.com/cdeterman/gpuR/issues/new/issues
instead.
Found the following HTML validation problems:
GP.csh.html:62:1 (GP.csh.Rd:22): Warning: missing </ul> before </div>
GP.un.html:62:1 (GP.un.Rd:22): Warning: missing </ul> before </div>
VP.CP.ZP.un.html:62:1 (VP.CP.ZP.un.Rd:22): Warning: missing </ul> before </div>
print.html:57:1 (print.Rd:20): Warning: missing </ul> before </div>
rGP.un.html:62:1 (rGP.un.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Marcin Jurek <marcinjurek1988@gmail.com>’

The Description field contains
  more detail in Katzfuss and Guinness (2017) <arXiv:1708.06302>. Package
  decomposition (IC0), based on Schaefer et al. (2019) <arXiv:1706.02205>
  and MaxMin ordering proposed in Guinness (2018) <arXiv:1609.05372>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hannah O. Ajoge <ohuajo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hannah", "O."),
                    family = "Ajoge",
                    role = c("aut", "cre"),
                    email = "ohuajo@gmail.com")
as necessary.
Maintainer: ‘Mayooran Thevaraja <mayooran@eng.jfn.ac.lk>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘prob_accept.Rd’:
    https://doi.org/10.1109/ICC.2006.255040
    https://doi.org/10.1016/j.foodcont.2013.02.021
  File ‘prob_contaminant.Rd’:
    https://doi.org/10.2307/1427041
Maintainer: ‘Sen Zhao <sen-zhao@sen-zhao.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sen",
                    family = "Zhao",
                    role = c("aut", "cre"),
                    email = "sen-zhao@sen-zhao.com")
as necessary.
Maintainer: ‘Leif Johnson <leif.t.johnson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Leif",
                    family = "Johnson",
                    role = c("aut", "cre"),
                    email = "leif.t.johnson@gmail.com")
as necessary.
Malformed Title field: should not end in a period.
checkRd: (-1) grade-package.Rd:51-54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) grade-package.Rd:55-57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) grade-package.Rd:58-71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) grade-package.Rd:72-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) grade-package.Rd:75-78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) grade-package.Rd:79-81: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
calcGradesForGradescope.html:63:1 (calcGradesForGradescope.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘Brendan Matthew Galdo <Brendan.m.galdo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/bmgaldo/graDiEnt
which should likely be
  https://github.com/bmgaldo/graDiEnt/issues
instead.
'library' or 'require' call not declared from: ‘Rgraphviz’
Found the following HTML validation problems:
generics.html:80:1 (generics.Rd:45): Warning: missing </ul> before </div>
simplify_query.html:47:1 (simplify_query.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
extract.html:65:1 (extract.Rd:26): Warning: missing </ul> before </div>
grainscape-defunct.html:46:1 (grainscape-defunct.Rd:10): Warning: missing </ul> before </div>
show.html:54:1 (show.Rd:17): Warning: missing </ul> before </div>
Maintainer: ‘Farzad Noorian <farzad.noorian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Farzad",
                      family = "Noorian",
                      role = c("aut", "cre"),
                      email = "farzad.noorian@gmail.com"),
               person(given = c("Anthony", "Mihirana"),
                      family = "de Silva",
                      role = "aut"))
as necessary.
Maintainer: ‘Iago Giné-Vázquez <iago.gin-vaz@protonmail.com>’

The Description field contains
  <arXiv:2106.14875> [math.NA] 28 Jun 2021, by Irfan Muhammad [School of
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Matteo Farne' <matteo.farne2@unibo.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Matteo",
                      family = "Farne'",
                      role = c("aut", "cre"),
                      email = "matteo.farne2@unibo.it"),
               person(given = "Angela",
                      family = "Montanari",
                      role = "aut",
                      email = "angela.montanari@unibo.it"))
as necessary.

The Description field contains
  Farne' and Montanari, 2018 <arXiv:1803.00374>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) Granger.inference.difference.Rd:65: Lost braces; missing escapes or markup?
    65 |         least one root larger than one) on bootstrapped \verb{x} and {y}.
       |                                                                      ^
checkRd: (-1) Granger.inference.difference.Rd:68: Lost braces; missing escapes or markup?
    68 |         least one root larger than one) on bootstrapped \verb{x} and {z}.
       |                                                                      ^
checkRd: (-1) Granger.inference.difference.Rd:71: Lost braces; missing escapes or markup?
    71 |         least one root larger than one) on bootstrapped \verb{x}, \verb{y} and {z}.
       |                                                                                ^
Maintainer: ‘Michael Klein <michael.klein@yale.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Klein",
                    role = c("aut", "cre"),
                    email = "michael.klein@yale.edu")
as necessary.
Maintainer: ‘Pratheesh P. Gopinath <grapescoa@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Author field differs from that derived from Authors@R
  Author:    ‘Pratheesh P. Gopinath [aut, cre] (<https://orcid.org/0000-0003-3290-0436>), Rajender Parsad [aut], Brigit Joseph [aut], Adarsh. V.S. [aut], Kerala Agricultural University [cph] (http://www.kau.in/)’
  Authors@R: ‘Pratheesh P. Gopinath [aut, cre] (ORCID: <https://orcid.org/0000-0003-3290-0436>), Rajender Parsad [aut], Brigit Joseph [aut], Adarsh. V.S. [aut], Kerala Agricultural University [cph] (url: http://www.kau.in/)’
checkRd: (-1) corrApp.Rd:40: Escaped LaTeX specials: \&
checkRd: (-1) crdApp.Rd:46: Escaped LaTeX specials: \&
checkRd: (-1) descApp.Rd:55: Escaped LaTeX specials: \&
checkRd: (-1) layoutApp.Rd:50: Escaped LaTeX specials: \&
checkRd: (-1) rbdApp.Rd:46: Escaped LaTeX specials: \&
checkRd: (-1) ttApp.Rd:43: Escaped LaTeX specials: \&
Maintainer: ‘Paul Savary <psavary@protonmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Tabea Rebafka <tabea.rebafka@sorbonne-universite.fr>’

The Description field contains
  algorithm" by T. Rebafka (2022) <arXiv:2211.02314>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Maxime HERVE <maxime.herve@univ-rennes1.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Maxime",
                    family = "HERVE",
                    role = c("aut", "cre"),
                    email = "maxime.herve@univ-rennes1.fr")
as necessary.
Found the following HTML validation problems:
gf_cache.html:47:1 (gf_cache.Rd:11): Warning: missing </ul> before </div>
gf_degrees.html:47:1 (gf_degrees.Rd:11): Warning: missing </ul> before </div>
gf_edge_columns.html:47:1 (gf_edge_columns.Rd:11): Warning: missing </ul> before </div>
gf_edges.html:47:1 (gf_edges.Rd:11): Warning: missing </ul> before </div>
gf_in_degrees.html:47:1 (gf_in_degrees.Rd:11): Warning: missing </ul> before </div>
gf_out_degrees.html:47:1 (gf_out_degrees.Rd:11): Warning: missing </ul> before </div>
gf_persist.html:53:1 (gf_persist.Rd:15): Warning: missing </ul> before </div>
gf_register.html:47:1 (gf_register.Rd:11): Warning: missing </ul> before </div>
gf_triplets.html:47:1 (gf_triplets.Rd:11): Warning: missing </ul> before </div>
gf_unpersist.html:51:1 (gf_unpersist.Rd:13): Warning: missing </ul> before </div>
gf_vertex_columns.html:47:1 (gf_vertex_columns.Rd:11): Warning: missing </ul> before </div>
gf_vertices.html:47:1 (gf_vertices.Rd:11): Warning: missing </ul> before </div>
spark_graphframe.html:53:1 (spark_graphframe.Rd:15): Warning: missing </ul> before </div>
Found the following HTML validation problems:
gh_bbox.html:52:1 (gh_bbox.Rd:16): Warning: missing </ul> before </div>
gh_points.html:46:1 (gh_points.Rd:10): Warning: missing </ul> before </div>
gh_spt_columns.html:69:1 (gh_spt_columns.Rd:23): Warning: missing </ul> before </div>
gh_time_distance.html:46:1 (gh_time_distance.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
Zmatrix.html:48:1 (Zmatrix.Rd:10): Warning: missing </ul> before </div>
fillFixedParams.html:54:1 (fillFixedParams.Rd:14): Warning: missing </ul> before </div>
Specified C++11: please drop specification unless essential
Running examples in ‘graphPAF-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.SAF_summary
> ### Title: Produce plots of sequential and average PAF
> ### Aliases: plot.SAF_summary
> 
> ### ** Examples
> 
> library(splines)
> library(survival)
> library(parallel)
> options(boot.parallel="snow")
> options(boot.ncpus=2)
> #  Simulated data on occupational and environmental exposure to
> # chronic cough from Eide, 1995
> # First specify the causal graph, in terms of the parents of each node.  Then put into a list
> parent_urban.rural <- c()
> parent_smoking.category <- c("urban.rural")
> parent_occupational.exposure <- c("urban.rural")
> parent_y <- c("urban.rural","smoking.category","occupational.exposure")
> parent_list <- list(parent_urban.rural, parent_smoking.category,
+ parent_occupational.exposure, parent_y)
> # also specify nodes of graph, in order from root to leaves
> node_vec <- c("urban.rural","smoking.category","occupational.exposure", "y")
> model_list=automatic_fit(Hordaland_data,
+ parent_list=parent_list, node_vec=node_vec, prev=.09)
Warning in eval(family$initialize) :
  non-integer #successes in a binomial glm!
Warning in eval(family$initialize) :
  non-integer #successes in a binomial glm!
Warning in eval(family$initialize) :
  non-integer #successes in a binomial glm!
Warning in eval(family$initialize) :
  non-integer #successes in a binomial glm!
> out <- average_paf(data=model_list[[length(model_list)]]$data,
+  model_list=model_list,
+ parent_list=parent_list, node_vec=node_vec, prev=.09, nperm=10,
+ riskfactor_vec = c("urban.rural","occupational.exposure"),ci=FALSE)
> plot(out)
Warning in fortify(data, ...) : Arguments in `...` must be used.
✖ Problematic argument:
• size = point.size
ℹ Did you misspell an argument name?
Error: Can't find method for generic `+(e1, e2)`:
- e1: <ggplot2::element_text>
- e2: <theme>
Execution halted
Found the following HTML validation problems:
compare_avg_tax_rates.html:63:1 (compare_avg_tax_rates.Rd:18): Warning: missing </ul> before </div>
install_taxstats.html:52:1 (install_taxstats.Rd:12): Warning: missing </ul> before </div>
revenue_foregone.html:54:1 (revenue_foregone.Rd:14): Warning: missing </ul> before </div>
sapto.html:87:1 (sapto.Rd:37): Warning: missing </ul> before </div>
Maintainer: ‘C. Cronkite-Ratcliff <ccronkite-ratcliff@usgs.gov>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Found the following HTML validation problems:
api-cell_.html:84:1 (api-cell_.Rd:46): Warning: missing </ul> before </div>
api-tabX.html:104:1 (api-tabX.Rd:72): Warning: missing </ul> before </div>
api-tabX_.html:98:1 (api-tabX_.Rd:62): Warning: missing </ul> before </div>
data_handling.html:59:1 (data_handling.Rd:26): Warning: missing </ul> before </div>
gmwr_book.html:47:1 (gmwr_book.Rd:11): Warning: missing </ul> before </div>
graph-ug2dag.html:47:1 (graph-ug2dag.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Xin Guo <x.guo@polyu.edu.hk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xin",
                      family = "Guo",
                      role = c("aut", "cre"),
                      email = "x.guo@polyu.edu.hk"),
               person(given = "Qiang",
                      family = "Fu",
                      role = "aut",
                      email = "qiang.fu@ubc.ca"))
as necessary.
Found the following HTML validation problems:
toLisp.html:46:1 (toLisp.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Adam Kapelner <kapelner@qc.cuny.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adam",
                      family = "Kapelner",
                      role = c("aut", "cre"),
                      email = "kapelner@qc.cuny.edu"),
               person(given = "David",
                      family = "Azriel",
                      role = "aut"),
               person(given = c("Abba", "Krieger", "see", "COPYRIGHTS", "file", "for", "the", "authors", "of", "the", "java"),
                      family = "libraries",
                      role = "aut"))
as necessary.
Maintainer: ‘Adam Kapelner <kapelner@qc.cuny.edu>’

The Description field contains
  Greatly Improved Balance" (2016) <arXiv:1612.02315>, Krieger, A,
  Binary Matching with Imbalance Optimization" (2021) <arXiv:2012.03330>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
check_duplicate_columns.html:46:1 (check_duplicate_columns.Rd:10): Warning: missing </ul> before </div>
rename_duplicate_columns.html:46:1 (rename_duplicate_columns.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
prEnvModelCall.html:59:1 (prEnvModelCall.Rd:15): Warning: missing </ul> before </div>
prNlChooseDf.html:104:1 (prNlChooseDf.Rd:52): Warning: missing </ul> before </div>
prPrintCAstring.html:53:1 (prPrintCAstring.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Xiaoping Shi <xiaoping.shi@ubc.ca>’

The Description field contains
  <arXiv:2107.00728>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Sophie Donnet <sophie.donnet@inrae.fr>’

The Description field contains
  Bar-hen, Barbillon and Donnet (2020) <arXiv:1807.10138>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) GREMLINS.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) GREMLINS.Rd:23: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Frank E Harrell Jr <fh@fharrell.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Frank", "E"),
                    family = "Harrell Jr",
                    role = c("aut", "cre"),
                    email = "fh@fharrell.com")
as necessary.
accrualReport: multiple local function definitions for ‘gg’ with
  different formal arguments
checkRd: (-1) setgreportOption.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:24: Lost braces
    24 | \item{code{figpos}:}{LaTeX figure environment position; default is \code{"htb!"}}
       |           ^
checkRd: (-1) setgreportOption.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) setgreportOption.Rd:29: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
appsection.html:58:1 (appsection.Rd:16): Warning: missing </ul> before </div>
dNeedle.html:58:1 (dNeedle.Rd:16): Warning: missing </ul> before </div>
getgreportOption.html:46:1 (getgreportOption.Rd:10): Warning: missing </ul> before </div>
maskDframe.html:54:1 (maskDframe.Rd:14): Warning: missing </ul> before </div>
maskVal.html:54:1 (maskVal.Rd:14): Warning: missing </ul> before </div>
putFig.html:98:1 (putFig.Rd:42): Warning: missing </ul> before </div>
sampleFrac.html:54:1 (sampleFrac.Rd:14): Warning: missing </ul> before </div>
setgreportOption.html:103:1 (setgreportOption.Rd:30): Warning: missing </ul> before </div>
startPlot.html:64:1 (startPlot.Rd:21): Warning: missing </ul> before </div>
Maintainer: ‘David Buch <davidbuch42@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sagiru Mati <smati@smati.com.ng>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
create_dot_body.html:60:1 (create_dot_body.Rd:17): Warning: missing </ul> before </div>
export_graphviz.html:54:1 (export_graphviz.Rd:14): Warning: missing </ul> before </div>
leaf_stats.default.html:57:1 (leaf_stats.default.Rd:15): Warning: missing </ul> before </div>
plot.rank_average_treatment_effect.html:63:1 (plot.rank_average_treatment_effect.Rd:18): Warning: missing </ul> before </div>
print.boosted_regression_forest.html:51:1 (print.boosted_regression_forest.Rd:12): Warning: missing </ul> before </div>
print.grf.html:59:1 (print.grf.Rd:16): Warning: missing </ul> before </div>
print.grf_tree.html:51:1 (print.grf_tree.Rd:12): Warning: missing </ul> before </div>
print.rank_average_treatment_effect.html:51:1 (print.rank_average_treatment_effect.Rd:12): Warning: missing </ul> before </div>
print.tuning_output.html:58:1 (print.tuning_output.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Paul Murrell <paul@stat.auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paul",
                    family = "Murrell",
                    role = c("aut", "cre"),
                    email = "paul@stat.auckland.ac.nz")
as necessary.
Malformed Description field: should contain one or more complete sentences.
Maintainer: ‘Paul Murrell <paul@stat.auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paul",
                    family = "Murrell",
                    role = c("aut", "cre"),
                    email = "paul@stat.auckland.ac.nz")
as necessary.
Maintainer: ‘Paul Murrell <p.murrell@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paul",
                      family = "Murrell",
                      role = c("aut", "cre"),
                      email = "p.murrell@auckland.ac.nz"),
               person(given = "Velvet",
                      family = "Ly.",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
bind.html:62:1 (bind.Rd:21): Warning: missing </ul> before </div>
combine.html:61:1 (combine.Rd:23): Warning: missing </ul> before </div>
Found the following HTML validation problems:
cluster.html:55:1 (cluster.Rd:14): Warning: missing </ul> before </div>
plot.GridOnClusters.html:85:1 (plot.GridOnClusters.Rd:33): Warning: missing </ul> before </div>
plotGOCpatterns.html:51:1 (plotGOCpatterns.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Mark Heckmann <heckmann.mark@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Author field differs from that derived from Authors@R
  Author:    ‘Claus O. Wilke [aut] (<https://orcid.org/0000-0002-7470-9261>), Brenton M. Wiernik [aut, cre] (<https://orcid.org/0000-0001-9560-6336>, @bmwiernik)’
  Authors@R: ‘Claus O. Wilke [aut] (ORCID: <https://orcid.org/0000-0002-7470-9261>), Brenton M. Wiernik [aut, cre] (ORCID: <https://orcid.org/0000-0001-9560-6336>, Twitter: @bmwiernik)’
Found the following HTML validation problems:
coerce_models.html:115:1 (coerce_models.Rd:82): Warning: missing </ul> before </div>
fast_cov.html:50:1 (fast_cov.Rd:12): Warning: missing </ul> before </div>
generate_models.html:76:1 (generate_models.Rd:40): Warning: missing </ul> before </div>
generate_n01.html:54:1 (generate_n01.Rd:14): Warning: missing </ul> before </div>
imodel-general.html:85:1 (imodel-general.Rd:44): Warning: missing </ul> before </div>
imodel-info.html:50:1 (imodel-info.Rd:13): Warning: missing </ul> before </div>
impose_zero.html:50:1 (impose_zero.Rd:12): Warning: missing </ul> before </div>
utilities_grips.html:81:1 (utilities_grips.Rd:41): Warning: missing </ul> before </div>
Maintainer: ‘Jader Lugon Junior <jlugonjr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jader", "Lugon"),
                      family = "Junior",
                      role = c("aut", "cre"),
                      email = "jlugonjr@gmail.com"),
               person(given = c("Antonio", "Jose", "da", "Silva"),
                      family = "Neto",
                      role = "aut"))
as necessary.
Maintainer: ‘Ryan Angi <angi.ryan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ryan",
                    family = "Angi",
                    role = c("aut", "cre"),
                    email = "angi.ryan@gmail.com")
as necessary.
Maintainer: ‘Pierre-Olivier Chasset <pierre-olivier@chasset.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pierre-Olivier",
                    family = "Chasset",
                    role = c("aut", "cre"),
                    email = "pierre-olivier@chasset.net")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘grnn-package.Rd’:
    \keyword{network,}
Maintainer: ‘Nelson Nazzicari <nelson.nazzicari@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Nelson", "Nazzicari", "&", "Filippo"),
                      family = "Biscarini",
                      role = "aut"),
               person(given = "Nelson",
                      family = "Nazzicari",
                      role = "cre",
                      email = "nelson.nazzicari@gmail.com"))
as necessary.
Maintainer: ‘Volkmar Liebscher <volkmar.liebscher@uni-greifswald.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Volkmar",
                    family = "Liebscher",
                    role = c("aut", "cre"),
                    email = "volkmar.liebscher@uni-greifswald.de")
as necessary.

The Description field contains
  <arXiv:1504.05795> for phylogenetic trees, but may apply to a diversity
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following HTML validation problems:
APIcall.html:60:1 (APIcall.Rd:22): Warning: missing </ul> before </div>
execAddin.html:46:1 (execAddin.Rd:10): Warning: missing </ul> before </div>
serverInit.html:57:1 (serverInit.Rd:14): Warning: missing </ul> before </div>
Found the following HTML validation problems:
try.renaming.method.again.html:57:1 (try.renaming.method.again.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Aaron England <aaron.england24@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "England",
                    role = c("aut", "cre"),
                    email = "aaron.england24@gmail.com")
as necessary.
Found the following HTML validation problems:
collapse_groups.html:392:1 (collapse_groups.Rd:302): Warning: <h5> anchor "cat_cols" already defined
collapse_groups.html:450:1 (collapse_groups.Rd:330): Warning: <h5> anchor "id_cols" already defined
collapse_groups.html:464:1 (collapse_groups.Rd:338): Warning: <h5> anchor "num_cols" already defined
differs_from_previous.html:193:1 (differs_from_previous.Rd:98): Warning: <h4> anchor "Numeric-scalar" already defined
fold.html:317:1 (fold.Rd:226): Warning: <h4> anchor "cat_col" already defined
fold.html:331:1 (fold.Rd:233): Warning: <h4> anchor "id_col" already defined
fold.html:342:1 (fold.Rd:239): Warning: <h4> anchor "num_col" already defined
partition.html:129:1 (partition.Rd:94): Warning: <h4> anchor "cat_col" already defined
partition.html:143:1 (partition.Rd:101): Warning: <h4> anchor "id_col" already defined
partition.html:154:1 (partition.Rd:107): Warning: <h4> anchor "num_col" already defined
Found the following HTML validation problems:
aggregate.vectorlist.html:61:1 (aggregate.vectorlist.Rd:18): Warning: missing </ul> before </div>
aggregate_marks.html:64:1 (aggregate_marks.Rd:24): Warning: missing </ul> before </div>
as.vectorlist.html:50:1 (as.vectorlist.Rd:12): Warning: missing </ul> before </div>
cbind.groupedHyperframe.html:48:1 (cbind.groupedHyperframe.Rd:11): Warning: missing </ul> before </div>
cli_defunct_.html:48:1 (cli_defunct_.Rd:14): Warning: missing </ul> before </div>
defunct.html:48:1 (defunct.Rd:14): Warning: missing </ul> before </div>
fv2theo.html:66:1 (fv2theo.Rd:32): Warning: missing </ul> before </div>
get_nested.html:52:1 (get_nested.Rd:15): Warning: missing </ul> before </div>
interpolation_fv.html:57:1 (interpolation_fv.Rd:19): Warning: missing </ul> before </div>
is.numeric.ppp.html:47:1 (is.numeric.ppp.Rd:10): Warning: missing </ul> before </div>
is.vectorlist.html:54:1 (is.vectorlist.Rd:16): Warning: missing </ul> before </div>
print.fvlist.html:51:1 (print.fvlist.Rd:12): Warning: missing </ul> before </div>
quantile.anylist.html:51:1 (quantile.anylist.Rd:12): Warning: missing </ul> before </div>
quantile.hyperframe.html:51:1 (quantile.hyperframe.Rd:12): Warning: missing </ul> before </div>
quantile.ppp.html:51:1 (quantile.ppp.Rd:12): Warning: missing </ul> before </div>
quantile.ppplist.html:51:1 (quantile.ppplist.Rd:12): Warning: missing </ul> before </div>
rmax.html:73:1 (rmax.Rd:32): Warning: missing </ul> before </div>
summary.fvlist.html:70:1 (summary.fvlist.Rd:25): Warning: missing </ul> before </div>
Maintainer: ‘Alexander Sibley <dcibioinformatics@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiaxing",
                      family = "Lin",
                      role = "aut"),
               person(given = "Alexander",
                      family = "Sibley",
                      role = c("aut", "cre"),
                      email = "dcibioinformatics@duke.edu"),
               person(given = "Tracy",
                      family = "Truong",
                      role = "aut"),
               person(given = "Kouros",
                      family = "Owzar",
                      role = "aut"),
               person(given = "Zhiguo",
                      family = "Li",
                      role = "aut"),
               person(given = "Layne",
                      family = "Rogers",
                      role = "ctb"),
               person(given = "Yu",
                      family = "Jiang",
                      role = "ctb"),
               person(given = "Janice",
                      family = "McCarthy",
                      role = "ctb"),
               person(given = "Andrew",
                      family = "Allen",
                      role = "ctb"))
as necessary.
Maintainer: ‘Niklas Pfister <pfister@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niklas",
                      family = "Pfister",
                      role = c("aut", "cre"),
                      email = "pfister@stat.math.ethz.ch"),
               person(given = "Sebastian",
                      family = "Weichwald",
                      role = "aut"))
as necessary.
Maintainer: ‘Zhigen Zhao <zhaozhg@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zhigen",
                    family = "Zhao",
                    role = c("aut", "cre"),
                    email = "zhaozhg@temple.edu")
as necessary.
Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
Maintainer: ‘Li Ma <li.ma@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jacopo",
                      family = "Soriano",
                      role = "aut"),
               person(given = "Li",
                      family = "Ma",
                      role = c("aut", "cre"),
                      email = "li.ma@duke.edu"))
as necessary.

The Description field contains
  <arXiv:1602.03990v2 [stat.ME]>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Terrance Savitsky <tds151@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Terrance",
                    family = "Savitsky",
                    role = c("aut", "cre"),
                    email = "tds151@gmail.com")
as necessary.
Found the following significant warnings:
  dpmix.cpp:150:18: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  dpmix.cpp:159:18: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  dpmix.cpp:252:23: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  dpmix_count.cpp:157:18: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  dpmix_count.cpp:166:18: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
  dpmix_count.cpp:293:23: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/growfunctions.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Found the following HTML validation problems:
samples.html:51:1 (samples.Rd:13): Warning: missing </ul> before </div>
samples.gmrfdpgrow.html:52:1 (samples.gmrfdpgrow.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Daniel Rodriguez <daniel.rodriguez.perez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Rodriguez",
                    role = c("aut", "cre"),
                    email = "daniel.rodriguez.perez@gmail.com")
as necessary.
Maintainer: ‘Ian W. McKeague <im2131@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sara",
                      family = "Lopez-Pintado",
                      role = "aut"),
               person(given = c("Ian", "W."),
                      family = "McKeague",
                      role = c("aut", "cre"),
                      email = "im2131@columbia.edu"))
as necessary.
Found the following HTML validation problems:
Khatf.html:68:1 (Khatf.Rd:24): Warning: missing </ul> before </div>
posteriordistribcurve.html:80:1 (posteriordistribcurve.Rd:30): Warning: missing </ul> before </div>
posteriorobs.html:80:1 (posteriorobs.Rd:30): Warning: missing </ul> before </div>
priormeanobs.html:56:1 (priormeanobs.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
generics.html:55:1 (generics.Rd:18): Warning: missing </ul> before </div>
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Xuan Dang <xuandang11289@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xuan",
                    family = "Dang",
                    role = c("aut", "cre"),
                    email = "xuandang11289@gmail.com")
as necessary.
Maintainer: ‘Lukas Meier <meier@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lukas",
                    family = "Meier",
                    role = c("aut", "cre"),
                    email = "meier@stat.math.ethz.ch")
as necessary.
Maintainer: ‘Lu Mao <lmao@biostat.wisc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lu",
                    family = "Mao",
                    role = c("aut", "cre"),
                    email = "lmao@biostat.wisc.edu")
as necessary.
Maintainer: ‘Hui (Tom) Tang <htang2013@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hui",
                      family = "Tang",
                      role = "aut"),
               person(given = c("Norbert", "J."),
                      family = "Pienta",
                      role = "aut"),
               person(given = "Hui",
                      family = "Tang",
                      role = "cre",
                      email = "htang2013@gmail.com",
                      comment = "Tom"))
as necessary.
Found the following files/directories:
  ‘p1_20up-vs-p2_25up_in_str1.txt’ ‘p1_20up-vs-p2_25up_in_str2.txt’
  ‘p2_25up-vs-p1_20up_in_str1.txt’ ‘p2_25up-vs-p1_20up_in_str2.txt’
  ‘s0_20up.txt’ ‘s0_30up.txt’ ‘s0_f2up.txt’ ‘strs.vec_01mx.txt’
  ‘strs.vec_02mx.txt’ ‘strs.vec_03mx.txt’ ‘strs.vec_04mx.txt’
  ‘strs.vec_05mx.txt’ ‘strs.vec_06mx.txt’ ‘strs.vec_30up.txt’
  ‘strs.vec_50up.txt’ ‘strs.vec_f2up.txt’ ‘uni_p1_20up-p2_25up.txt’
Maintainer: ‘Craig Varrichio <canthony427@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Craig",
                    family = "Varrichio",
                    role = c("aut", "cre"),
                    email = "canthony427@gmail.com")
as necessary.
checkRd: (-1) matches.Rd:33: Lost braces; missing escapes or markup?
    33 | be set to an index value of \code{length+1}.  If {indexes=FALSE}, they will
       |                                                  ^
File ‘grr/libs/grr.so’:
  Found non-API call to R: ‘STRING_PTR’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Daniel C. Amorese  <amorese@ipgp.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daniel",
                      family = "Amorese",
                      role = "aut"),
               person(given = c("Paul", "A."),
                      family = "Rydelek",
                      role = "aut"),
               person(given = "Jean-Robert",
                      family = "Grasso",
                      role = "aut"),
               person(given = c("Daniel", "C."),
                      family = "Amorese",
                      role = "cre",
                      email = "amorese@ipgp.fr"))
as necessary.
checkRd: (-1) fmddisc.Rd:23: Escaped LaTeX specials: \_
checkRd: (-1) schuster.Rd:46: Escaped LaTeX specials: \_
checkRd: (-1) schuster.Rd:54: Escaped LaTeX specials: \&
Found the following files/directories:
  ‘FMD mag discontinuities_disc.png’ ‘FMD mag
  discontinuities_disc1.res’ ‘FMD mag discontinuities_disc2.res’
  ‘IDYLLWILD_bvmed.png’ ‘IDYLLWILD_fig.png’ ‘Schuster's
  diagram_schu.png’ ‘hour.res’
Maintainer: ‘Andy Wills <andy@willslab.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kazunaga",
                      family = "Matsuki",
                      role = "aut"),
               person(given = "Andy",
                      family = "Wills",
                      role = "cre",
                      email = "andy@willslab.co.uk"))
as necessary.
checkRd: (-1) qdb.p.correct.Rd:14: Lost braces; missing escapes or markup?
    14 | \item{refpts}{a numeric vector used as a reference point to determine the correct side of the \code{qdb} for classifying \code{x}. The \code{length(refpts)} should be equal to {ncol(x)}. Default to \code{colMeans(x)}. }
       |                                                                                                                                                                                 ^
Maintainer: ‘Louis Bergelson <louisb@broadinstitute.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kiran",
                      family = "Garimella",
                      role = "aut"),
               person(given = "Louis",
                      family = "Bergelson",
                      role = "cre",
                      email = "louisb@broadinstitute.org"))
as necessary.
Maintainer: ‘Samarendra Das <samarendra.das@icar.gov.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Samarendra",
                    family = "Das",
                    role = c("aut", "cre"),
                    email = "samarendra.das@icar.gov.in")
as necessary.
Maintainer: ‘Rob Tibshirani <tibs@stat.stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Brad",
                      family = "Efron",
                      role = "aut"),
               person(given = "R.",
                      family = "Tibshirani",
                      role = "aut"),
               person(given = "Rob",
                      family = "Tibshirani",
                      role = "cre",
                      email = "tibs@stat.stanford.edu"))
as necessary.
Maintainer: ‘Olivier Briet <o.briet@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Olivier",
                    family = "Briet",
                    role = c("aut", "cre"),
                    email = "o.briet@gmail.com")
as necessary.
Maintainer: ‘Solenne Gaucher <solenne.gaucher@math.u-psud.fr>’

The Description field contains
  as describes in Gaucher, Klopp and Robin (2019) <arXiv:1911.13122>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) crossval.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crossval.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crossval.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crossval.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crossval.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crossval.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gsbm_mcgd_parallel.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Tobias Mütze <tobias.muetze@outlook.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following HTML validation problems:
check_gsnb.html:46:1 (check_gsnb.Rd:10): Warning: missing </ul> before </div>
get_covar.html:46:1 (get_covar.Rd:10): Warning: missing </ul> before </div>
print.gsnb.html:51:1 (print.gsnb.Rd:12): Warning: missing </ul> before </div>
print.nb.html:51:1 (print.nb.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
check_rec_rates_formatting.html:46:1 (check_rec_rates_formatting.Rd:10): Warning: missing </ul> before </div>
make_subscript_matrix.html:71:1 (make_subscript_matrix.Rd:22): Warning: missing </ul> before </div>
tidy_up_sampled_haplos.html:50:1 (tidy_up_sampled_haplos.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Xueyuan Cao <xcao12@uthsc.edu>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘gsda.Rd’:
    \keyword{association;}
    \keyword{enrichment;}
Maintainer: ‘Daniel Greene <dg333@cam.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Greene",
                    role = c("aut", "cre"),
                    email = "dg333@cam.ac.uk")
as necessary.
Maintainer: ‘Marie-Karelle Riviere <eldamjh@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marie-Karelle",
                    family = "Riviere",
                    role = c("aut", "cre"),
                    email = "eldamjh@gmail.com")
as necessary.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = c("Nancy", "R."),
                      family = "Zhang",
                      role = "aut"),
               person(given = "Lynna",
                      family = "Chu",
                      role = "aut"),
               person(given = "Hoseung",
                      family = "Song",
                      role = "aut"))
as necessary.
Maintainer: ‘Sayanti Guha Majumdar <sayanti23gm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sayanti", "Guha"),
                      family = "Majumdar",
                      role = c("aut", "cre"),
                      email = "sayanti23gm@gmail.com"),
               person(given = "Anil",
                      family = "Rai",
                      role = "aut"),
               person(given = c("Dwijesh", "Chandra"),
                      family = "Mishra",
                      role = "aut"))
as necessary.
Maintainer: ‘Ben Marwick <benmarwick@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/benmarwick/gsloid
which should likely be
  https://github.com/benmarwick/gsloid/issues
instead.
checkRd: (-1) lisiecki2005.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) lisiecki2005.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) lisiecki2005.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) spratt2016.Rd:29: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
File ‘gsl/libs/gsl.so’:
  Found non-API calls to R: ‘EXTPTR_PTR’, ‘EXTPTR_TAG’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Sergio Venturini <sergio.venturini@unibocconi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sergio",
                    family = "Venturini",
                    role = c("aut", "cre"),
                    email = "sergio.venturini@unibocconi.it")
as necessary.
Maintainer: ‘Zhenyu Jia <ajia.ucr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zhenyu",
                    family = "Jia",
                    role = c("aut", "cre"),
                    email = "ajia.ucr@gmail.com")
as necessary.
Found the following HTML validation problems:
print.GSODR.Info.html:51:1 (print.GSODR.Info.Rd:12): Warning: missing </ul> before </div>
Maintainer: ‘Yifei Zhang <yz3925@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yifei",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "yz3925@columbia.edu"),
               person(given = "Xuan",
                      family = "Bi",
                      role = "aut"))
as necessary.
Maintainer: ‘Baosheng Liang <liangbsunc@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Baosheng",
                      family = "Liang",
                      role = c("aut", "cre"),
                      email = "liangbsunc@gmail.com"),
               person(given = "Yuanjia",
                      family = "Wang",
                      role = "aut"),
               person(given = "Donglin",
                      family = "Zeng",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
plot.gstar.html:59:1 (plot.gstar.Rd:16): Warning: missing </ul> before </div>
predict.gstar.html:55:1 (predict.gstar.Rd:14): Warning: missing </ul> before </div>
summary.gstar.html:60:1 (summary.gstar.Rd:16): Warning: missing </ul> before </div>
Found the following HTML validation problems:
variogram.html:304:1 (variogram.Rd:166): Warning: <h3> anchor "_sec_note" already defined
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = "Lynna",
                      family = "Chu",
                      role = "aut"))
as necessary.

The Description field contains
  high-dimensional and non-Euclidean data <arXiv:1810.05973>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘G. Grothendieck <ggrothendieck@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "G.",
                    family = "Grothendieck",
                    role = c("aut", "cre"),
                    email = "ggrothendieck@gmail.com")
as necessary.
Maintainer: ‘Yiqing Xu <yiqingxu@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yiqing",
                      family = "Xu",
                      role = c("aut", "cre"),
                      email = "yiqingxu@stanford.edu"),
               person(given = "Licheng",
                      family = "Liu",
                      role = "aut"))
as necessary.
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/gsynth.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
Specified C++11: please drop specification unless essential
Found the following HTML validation problems:
gtable_height.html:46:1 (gtable_height.Rd:10): Warning: missing </ul> before </div>
gtable_width.html:46:1 (gtable_width.Rd:10): Warning: missing </ul> before </div>
is.gtable.html:46:1 (is.gtable.Rd:10): Warning: missing </ul> before </div>
print.gtable.html:55:1 (print.gtable.Rd:14): Warning: missing </ul> before </div>
checkRd: (-1) artset1987.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tumor.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tumor.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tumor.Rd:12: Lost braces in \itemize; meant \describe ?
Found the following HTML validation problems:
group_onehot.html:50:1 (group_onehot.Rd:12): Warning: missing </ul> before </div>
scale_data.html:68:1 (scale_data.Rd:24): Warning: missing </ul> before </div>
select_hbgs.html:58:1 (select_hbgs.Rd:16): Warning: missing </ul> before </div>
Maintainer: ‘Hoseung Song <hosong@ucdavis.edu>’

The Description field contains
  data.  Song, H. and Chen, H. (2022) <arXiv:2205.13787>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = "Jingru",
                      family = "Zhang",
                      role = "aut"))
as necessary.
Found the following HTML validation problems:
get_row_index.html:156:1 (get_row_index.Rd:116): Warning: missing </ul> before </div>
last_row_id.html:46:1 (last_row_id.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
read_geojson.html:46:1 (read_geojson.Rd:10): Warning: missing </ul> before </div>
Found the following HTML validation problems:
as.data.frame.gt_tbl.html:61:1 (as.data.frame.gt_tbl.Rd:22): Warning: missing </ul> before </div>
print.gt_tbl.html:64:1 (print.gt_tbl.Rd:20): Warning: missing </ul> before </div>
Found the following HTML validation problems:
tbl_listing.html:62:1 (tbl_listing.Rd:27): Warning: <h3> anchor "group_by" already defined
Found the following HTML validation problems:
gt_verify_path.html:46:1 (gt_verify_path.Rd:10): Warning: missing </ul> before </div>
remove_gt_api_key.html:52:1 (remove_gt_api_key.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
deprecated_ci_column.html:176:1 (deprecated_ci_column.Rd:76): Warning: missing </ul> before </div>
deprecated_ci_column.html:97:1 (deprecated_ci_column.Rd:50): Warning: <h4> anchor "+E2+80+98modify_spanning_header+28+29+E2+80+99" already defined
tests.html:439:1 (tests.Rd:165): Warning: missing </ul> before </div>
Maintainer: ‘JunhuiLi<junhuili@cau.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "JunhuiLi",
                      family = "WenxinLiu",
                      role = "aut"),
               person(family = "JunhuiLi",
                      role = "cre",
                      email = "junhuili@cau.edu.cn"))
as necessary.
Found the following HTML validation problems:
gu_api_key.html:56:1 (gu_api_key.Rd:12): Warning: missing </ul> before </div>
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gfrance85.Rd’
Found the following HTML validation problems:
eq1dk.html:55:1 (eq1dk.Rd:14): Warning: missing </ul> before </div>
eqn1.html:55:1 (eqn1.Rd:14): Warning: missing </ul> before </div>
guess_lik.html:54:1 (guess_lik.Rd:14): Warning: missing </ul> before </div>
guessdk_lik.html:54:1 (guessdk_lik.Rd:14): Warning: missing </ul> before </div>
interleave.html:50:1 (interleave.Rd:12): Warning: missing </ul> before </div>
checkRd: (-1) guild_merge.Rd:38: Lost braces; missing escapes or markup?
    38 |     \item{\code{summary_name}}{Name used for the run summary. Use '${run_id}' in the name to include the run ID.}
       |                                                                     ^
checkRd: (-1) guild_merge_cli.Rd:88: Lost braces; missing escapes or markup?
    88 | \item{summary_name}{Name used for the run summary. Use '${run_id}' in the name to include the run ID.}
       |                                                          ^
Found the following HTML validation problems:
guild_api_runs_cli.html:150:1 (guild_api_runs_cli.Rd:73): Warning: missing </ul> before </div>
guild_run_cli.html:508:1 (guild_run_cli.Rd:355): Warning: missing </ul> before </div>
guild_select_cli.html:389:1 (guild_select_cli.Rd:285): Warning: missing </ul> before </div>
guild_view_cli.html:377:1 (guild_view_cli.Rd:272): Warning: missing </ul> before </div>
Maintainer: ‘Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ricardo",
                    family = "Wurmus",
                    role = c("aut", "cre"),
                    email = "ricardo.wurmus@mdc-berlin.de")
as necessary.
Maintainer: ‘Chris Muir <cdmuir@hawaii.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gregor",
                      family = "Aisch",
                      role = "aut"),
               person(given = "Josh",
                      family = "Keller",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = c("aut", "cre"),
                      email = "edd@debian.org"))
as necessary.
Found the following HTML validation problems:
discard_end_while.html:50:1 (discard_end_while.Rd:12): Warning: missing </ul> before </div>
discard_start_while.html:50:1 (discard_start_while.Rd:12): Warning: missing </ul> before </div>
keep_while.html:50:1 (keep_while.Rd:12): Warning: missing </ul> before </div>
read_url.html:46:1 (read_url.Rd:10): Warning: missing </ul> before </div>
Maintainer: ‘Ho Tsung-wu <tsungwu@ntnu.edu.tw>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ho",
                    family = "Tsung-wu",
                    role = c("aut", "cre"),
                    email = "tsungwu@ntnu.edu.tw")
as necessary.
Found the following HTML validation problems:
gvc.html:137:1 (gvc.Rd:105): Warning: <h5> anchor "Usage" already defined
gvc.html:143:1 (gvc.Rd:109): Warning: <h5> anchor "Returns" already defined
gvc.html:160:1 (gvc.Rd:118): Warning: <h5> anchor "Usage" already defined
gvc.html:166:1 (gvc.Rd:122): Warning: <h5> anchor "Returns" already defined
gvc.html:183:1 (gvc.Rd:131): Warning: <h5> anchor "Usage" already defined
gvc.html:189:1 (gvc.Rd:135): Warning: <h5> anchor "Returns" already defined
gvc.html:206:1 (gvc.Rd:144): Warning: <h5> anchor "Usage" already defined
gvc.html:212:1 (gvc.Rd:148): Warning: <h5> anchor "Arguments" already defined
Maintainer: ‘Elizabeth Slate <slate@stat.fsu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Edsel", "A."),
                      family = "Pena",
                      role = "aut",
                      email = "pena@stat.sc.edu"),
               person(given = c("Elizabeth", "H."),
                      family = "Slate",
                      role = "aut",
                      email = "eslate@fsu.edu"),
               person(given = "Elizabeth",
                      family = "Slate",
                      role = "cre",
                      email = "slate@stat.fsu.edu"))
as necessary.
Found the following HTML validation problems:
gvs_core.html:64:1 (gvs_core.Rd:22): Warning: missing </ul> before </div>
Maintainer: ‘Li Xing <sfulxing@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yan",
                      family = "Xu",
                      role = "aut"),
               person(given = "Li",
                      family = "Xing",
                      role = c("aut", "cre"),
                      email = "sfulxing@gmail.com"),
               person(given = "Jessica",
                      family = "Su",
                      role = "aut"),
               person(given = "Xuekui",
                      family = "Zhang",
                      role = "aut",
                      email = "UBC.X.Zhang@gmail.com"),
               person(given = "Weiliang",
                      family = "Qiu",
                      role = "aut",
                      email = "Weiliang.Qiu@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) esSim.Rd:81: Lost braces; missing escapes or markup?
    81 | \eqn{83} SNPs are in cluster {-}, \eqn{714} SNPs are in cluster \eqn{0},
       |                              ^
checkRd: (-1) esSimDiffPriors.Rd:91: Lost braces; missing escapes or markup?
    91 | \eqn{64} SNPs are in cluster {-}, \eqn{708} SNPs are in cluster \eqn{0},
       |                              ^
Maintainer: ‘Stephanie Gogarten <sdmorris@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ian",
                      family = "Painter",
                      role = "aut"),
               person(given = c("University", "of"),
                      family = "Washington",
                      role = "aut"),
               person(given = "Stephanie",
                      family = "Gogarten",
                      role = "cre",
                      email = "sdmorris@uw.edu"))
as necessary.
Found the following HTML validation problems:
df_site_new.html:60:1 (df_site_new.Rd:18): Warning: missing </ul> before </div>
Found the following HTML validation problems:
get.period.fitting.month.html:48:1 (get.period.fitting.month.Rd:12): Warning: missing </ul> before </div>
Found the following HTML validation problems:
XXX.html:46:1 (XXX.Rd:10): Warning: missing </ul> before </div>
add.html:88:1 (add.Rd:39): Warning: missing </ul> before </div>
check_deprecated.html:50:1 (check_deprecated.Rd:12): Warning: missing </ul> before </div>
dispose.html:54:1 (dispose.Rd:15): Warning: missing </ul> before </div>
editable.html:62:1 (editable.Rd:23): Warning: missing </ul> before </div>
focus.html:61:1 (focus.Rd:21): Warning: missing </ul> before </div>
font.html:84:1 (font.Rd:47): Warning: missing </ul> before </div>
gWidgets2-undocumented.html:59:1 (gWidgets2-undocumented.Rd:16): Warning: missing </ul> before </div>
gcontainer.html:61:1 (gcontainer.Rd:21): Warning: missing </ul> before </div>
gdfnotebook.html:62:1 (gdfnotebook.Rd:19): Warning: missing </ul> before </div>
getToolkitWidget.html:72:1 (getToolkitWidget.Rd:34): Warning: missing </ul> before </div>
ggraphicsnotebook.html:95:1 (ggraphicsnotebook.Rd:46): Warning: missing </ul> before </div>
gimage.html:102:1 (gimage.Rd:49): Warning: missing </ul> before </div>
gmenu.html:149:1 (gmenu.Rd:74): Warning: missing </ul> before </div>
gtoolbar.html:133:1 (gtoolbar.Rd:66): Warning: missing </ul> before </div>
gwidget.html:97:1 (gwidget.Rd:53): Warning: missing </ul> before </div>
isExtant.html:49:1 (isExtant.Rd:13): Warning: missing </ul> before </div>
methods.html:67:1 (methods.Rd:21): Warning: missing </ul> before </div>
observer.html:55:1 (observer.Rd:15): Warning: missing </ul> before </div>
redo.html:53:1 (redo.Rd:15): Warning: missing </ul> before </div>
short_summary.html:91:1 (short_summary.Rd:37): Warning: missing </ul> before </div>
size.html:57:1 (size.Rd:21): Warning: missing </ul> before </div>
tag.html:64:1 (tag.Rd:23): Warning: missing </ul> before </div>
tooltip.html:63:1 (tooltip.Rd:21): Warning: missing </ul> before </div>
undo.html:53:1 (undo.Rd:15): Warning: missing </ul> before </div>
visible.html:64:1 (visible.Rd:23): Warning: missing </ul> before </div>