Running ‘testthat-active_snw.R’ [48s/111s]
  Running ‘testthat-clustering.R’ [10s/28s]
  Running ‘testthat-comparison.R’ [6s/14s]
  Running ‘testthat-core.R’ [5s/13s]
  Running ‘testthat-data_generation.R’ [6s/23s]
  Running ‘testthat-enrichment.R’ [45s/80s]
  Running ‘testthat-scoring.R’ [7s/11s]
  Running ‘testthat-utility.R’ [28s/38s]
  Running ‘testthat-visualization.R’ [12s/14s]
  Running ‘testthat-zzz.R’
Running the tests in ‘tests/testthat-data_generation.R’ failed.
Complete output:
  > library(testthat)
  > library(pathfindR)
  Loading required package: pathfindR.data
  ##############################################################################
                          Welcome to pathfindR!
  
  Please cite the article below if you use pathfindR in published reseach:
  
  Ulgen E, Ozisik O, Sezerman OU. 2019. pathfindR: An R Package for Comprehensive
  Identification of Enriched Pathways in Omics Data Through Active Subnetworks.
  Front. Genet. doi:10.3389/fgene.2019.00858
  
  ##############################################################################
  > 
  > test_check("pathfindR", filter = "data_generation")
  [ FAIL 1 | WARN 0 | SKIP 2 | PASS 18 ]
  
  ══ Skipped tests (2) ═══════════════════════════════════════════════════════════
  • On CRAN (2): 'test-data_generation.R:94:3', 'test-data_generation.R:119:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-data_generation.R:49:3'): `get_biogrid_pin()` -- determines and downloads the latest version ──
  <curl_error_operation_timedout/curl_error/error/condition>
  Error in `curl::curl_fetch_memory(url, handle = handle)`: Timeout was reached [downloads.thebiogrid.org]:
  Connection timed out after 10001 milliseconds
  Backtrace:
      ▆
   1. ├─pathfindR:::get_biogrid_pin() at test-data_generation.R:49:3
   2. │ └─httr::GET("https://downloads.thebiogrid.org/BioGRID/Latest-Release/")
   3. │   └─httr:::request_perform(req, hu$handle$handle)
   4. │     ├─httr:::request_fetch(req$output, req$url, handle)
   5. │     └─httr:::request_fetch.write_memory(req$output, req$url, handle)
   6. │       └─curl::curl_fetch_memory(url, handle = handle)
   7. └─curl:::raise_libcurl_error(...)
  
  [ FAIL 1 | WARN 0 | SKIP 2 | PASS 18 ]
  Error: Test failures
  Execution halted