Running ‘run-all.R’ [35s/95s]
  Running ‘testthat.R’ [35s/93s]
Running the tests in ‘tests/run-all.R’ failed.
Complete output:
  > library(testthat)
  > 
  > test_check("ProjectTemplate")
  Loading required package: ProjectTemplate
  Loading required package: digest
  Loading required package: tibble
  Project name: test_project20f939510623d4
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9396ac169a3
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9397ca124b6
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Configuration for project: test_project20f9397ca124b6
  version                     0.11.0
  data_loading                TRUE
  data_loading_header         TRUE
  data_ignore                 
  cache_loading               TRUE
  recursive_loading           FALSE
  munging                     TRUE
  logging                     FALSE
  logging_level               INFO
  load_libraries              FALSE
  libraries                   reshape2, plyr, tidyverse, stringr, lubridate
  as_factors                  FALSE
  tables_type                 tibble
  attach_internal_libraries   FALSE
  cache_loaded_data           TRUE
  sticky_variables            NONE
  underscore_variables        TRUE
  cache_file_format           RData
  dummy   999
  Configuration for project: test_project20f9397ca124b6
  version                     0.11.0
  data_loading                TRUE
  data_loading_header         TRUE
  data_ignore                 
  cache_loading               TRUE
  recursive_loading           FALSE
  munging                     TRUE
  logging                     FALSE
  logging_level               INFO
  load_libraries              FALSE
  libraries                   reshape2, plyr, tidyverse, stringr, lubridate
  as_factors                  FALSE
  tables_type                 tibble
  attach_internal_libraries   FALSE
  cache_loaded_data           TRUE
  sticky_variables            NONE
  underscore_variables        TRUE
  cache_file_format           RData
  
  Additional custom config present for this project:
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f939219a74d
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: foo.reader.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: example
    Creating cache entry from global environment: example
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Following objects not in memory: 
  Objects to clear from memory: xxxx
  Project name: test_project20f9391f2ebed5
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: helper.function project.info
  Clearing cache for project: test_project20f9391f2ebed5
  Clearing cache for project: test_project20f9393a4755fa
  Objects to clear from memory: xxx
  Project name: test_project20f9393a4755fa
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
    Creating cache entry from CODE: xxxx
  Objects to clear from memory: config project.info
  Objects to clear from memory: project.info
  Objects to clear from memory: yyy
  Following objects not in memory: xxx
  Following objects not in memory: xxx
  Variables not cleared: config
  No objects to clear
  Objects to clear from memory: .yyy helper.function project.info
  Project name: test_project20f939430194
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f939430194
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Configuration for project: test_project20f9393114ecb3
  Project name: test_project20f9394b2a0ff1
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f939115e2d59
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  
  == Testing 1.R =================================================================
  
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] Done!
  
  == Testing 1.R =================================================================
  
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] Done!
  Current Directory: test_project20f9396ec9ca56 is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Directory: test_project20f9396ec9ca56 is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Directory: test_project220f939600cf9f7 is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Objects to clear from memory: config helper.function project.info
  No objects to clear
  Objects to clear from memory: config file20f9394b6aecec helper.function project.info
    Creating cache entry from CODE: test_data
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Please change to correct directory and re-run load.project()
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run clear.cache() again.
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run cache() again.
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run reload.project() again.
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run test.project() again.
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run stub.tests() again.
  
  Current Directory: test_project20f93936bb79b9 is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Please change to correct directory and re-run project.config()
  
  Project name: test_project20f9392c6b78a5
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: Thumbs
  Loading required namespace: RSQLite
    Creating cache entry from global environment: var_to_cache
  Loading required package: data.table
    
  01-test_data.py start
  01-test_data.py finish
    
  02-test_data.py start
  ['1', '20']
  ['2', '30']
  ['3', '40']
  Python data exists in the environment
  y
  02-test_data.py finish
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
   version, data_loading_header, data_ignore, logging_level, tables_type, attach_internal_libraries, cache_loaded_data, sticky_variables, underscore_variables, cache_file_format
  
  There is a new config item called cache_loaded_data which auto-caches data
  after it has been loaded from the data directory.  This has been switched
  off for this project in case it breaks your scripts.  However you can switch
  it on manually by editing global.dcf
  
  data_tables has been renamed tables_type.  It can take the value 'tibble', 
  'data_table', or 'data_frame.  If data_tables is TRUE, tables_type will be
  set to 'data_table', otherwise the default 'data_frame' will be used.  if you 
  wish a different default set it manually by editing global.dcf.  Future new
  projects will use 'tibble' by default.
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
   data_loading_header, data_ignore, logging_level, tables_type, attach_internal_libraries, cache_loaded_data, sticky_variables, underscore_variables, cache_file_format
  
  There is a new config item called cache_loaded_data which auto-caches data
  after it has been loaded from the data directory.  This has been switched
  off for this project in case it breaks your scripts.  However you can switch
  it on manually by editing global.dcf
  
  data_tables has been renamed tables_type.  It can take the value 'tibble', 
  'data_table', or 'data_frame.  If data_tables is TRUE, tables_type will be
  set to 'data_table', otherwise the default 'data_frame' will be used.  if you 
  wish a different default set it manually by editing global.dcf.  Future new
  projects will use 'tibble' by default.
  Migrating project configuration
  [1] FALSE
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   cache_loaded_data
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file contained unused entries which have been
  removed.  The unused entries are:
  Migrating project configuration
  [1] FALSE
  Migrating project configuration
  [1] TRUE
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   tables_type
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   tables_type
  Project name: test_project20f939318acd5
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: .Random.seed config helper.function project.info
  Project name: test_project20f93963c73e71
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f93963c73e71
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9392f5e3a0
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f9392f5e3a0
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f939156a4165
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f939156a4165
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f93925cf041c
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9396f4e527f
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f9396f4e527f
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f93951edbcde
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f93951edbcde
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9396a9052bc
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f9396a9052bc
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f9395e8fc205
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f9395e8fc205
  Loading project configuration
  Objects to clear from memory: config helper.function project.info
  Project name: test_project20f939280b8e5b
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f939280b8e5b
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Loading required package: qs
  qs 0.27.3. Announcement: https://github.com/qsbase/qs/issues/103
    Creating cache entry from global environment: cache.qs
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   cache_loaded_data
    Loading table: example_30a
    Loading table: example_30b
    Loading table: example_31a
    Loading table: example_31b
    Loading table: example_28
  re-encoding from CP1252
  re-encoding from CP1252
  Objects to clear from memory: .Random.seed config helper.function project.info test test_data12 test_data22
  Objects to clear from memory: config helper.function project.info
  Items in cache will not be cleared
  Use reload.project(reset=TRUE) to clear cache also
  Objects to clear from memory: helper.function project.info z
  Reloading Project ...
  Project name: test_project20f9399c6796f
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading cached data set: z
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info x y z
  Project name: test_project20f9392adf53ca
  Loading project configuration
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f939d6f3233
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project20f9391813d234
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: file_not_in_full_template
   Translating data.frame to tibble: file_not_in_full_template
    Creating cache entry from global environment: file_not_in_full_template
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  [1] FALSE
  [ FAIL 1 | WARN 215 | SKIP 0 | PASS 909 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-readers.R:940:3'): Example 35: PPM Support with .ppm Extension ──
  `ppm.reader(data.file, filename, variable.name)` did not throw the expected warning.
  
  [ FAIL 1 | WARN 215 | SKIP 0 | PASS 909 ]
  Error: Test failures
  Execution halted
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(ProjectTemplate)
  Loading required package: digest
  Loading required package: tibble
  > 
  > test_check("ProjectTemplate")
  Project name: test_project2144c819ba930a
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c87e9760ec
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c86cd8a070
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Configuration for project: test_project2144c86cd8a070
  version                     0.11.0
  data_loading                TRUE
  data_loading_header         TRUE
  data_ignore                 
  cache_loading               TRUE
  recursive_loading           FALSE
  munging                     TRUE
  logging                     FALSE
  logging_level               INFO
  load_libraries              FALSE
  libraries                   reshape2, plyr, tidyverse, stringr, lubridate
  as_factors                  FALSE
  tables_type                 tibble
  attach_internal_libraries   FALSE
  cache_loaded_data           TRUE
  sticky_variables            NONE
  underscore_variables        TRUE
  cache_file_format           RData
  dummy   999
  Configuration for project: test_project2144c86cd8a070
  version                     0.11.0
  data_loading                TRUE
  data_loading_header         TRUE
  data_ignore                 
  cache_loading               TRUE
  recursive_loading           FALSE
  munging                     TRUE
  logging                     FALSE
  logging_level               INFO
  load_libraries              FALSE
  libraries                   reshape2, plyr, tidyverse, stringr, lubridate
  as_factors                  FALSE
  tables_type                 tibble
  attach_internal_libraries   FALSE
  cache_loaded_data           TRUE
  sticky_variables            NONE
  underscore_variables        TRUE
  cache_file_format           RData
  
  Additional custom config present for this project:
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c865cac151
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: foo.reader.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: example
    Creating cache entry from global environment: example
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Following objects not in memory: 
  Objects to clear from memory: xxxx
  Project name: test_project2144c82f0cba7a
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: helper.function project.info
  Clearing cache for project: test_project2144c82f0cba7a
  Clearing cache for project: test_project2144c84a95847c
  Objects to clear from memory: xxx
  Project name: test_project2144c84a95847c
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
    Creating cache entry from CODE: xxxx
  Objects to clear from memory: config project.info
  Objects to clear from memory: project.info
  Objects to clear from memory: yyy
  Following objects not in memory: xxx
  Following objects not in memory: xxx
  Variables not cleared: config
  No objects to clear
  Objects to clear from memory: .yyy helper.function project.info
  Project name: test_project2144c875677eec
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c875677eec
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Configuration for project: test_project2144c87d1fd092
  Project name: test_project2144c830e00318
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c84d319632
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  
  == Testing 1.R =================================================================
  
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] Done!
  
  == Testing 1.R =================================================================
  
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
  [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] Done!
  Current Directory: test_project2144c813ad6db6 is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Directory: test_project2144c813ad6db6 is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Directory: test_project22144c8a42599b is a ProjectTemplate directory
  Cannot create a new project inside an existing one
  Please change to another directory and re-run create.project()
  Objects to clear from memory: config helper.function project.info
  No objects to clear
  Objects to clear from memory: config file2144c812a03e75 helper.function project.info
    Creating cache entry from CODE: test_data
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Please change to correct directory and re-run load.project()
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run clear.cache() again.
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run cache() again.
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run reload.project() again.
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run test.project() again.
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Change to a valid ProjectTemplate directory and run stub.tests() again.
  
  Current Directory: test_project2144c86984720e is not a valid ProjectTemplate directory because one or more mandatory directories are missing.  If you believe you are in a ProjectTemplate directory and seeing this message in error, try running migrate.project().  migrate.project() will ensure the ProjectTemplate structure is consistent with your version of ProjectTemplate.
  Please change to correct directory and re-run project.config()
  
  Project name: test_project2144c8659cb8f9
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: Thumbs
  Loading required namespace: RSQLite
    Creating cache entry from global environment: var_to_cache
  Loading required package: data.table
    
  01-test_data.py start
  01-test_data.py finish
    
  02-test_data.py start
  ['1', '20']
  ['2', '30']
  ['3', '40']
  Python data exists in the environment
  y
  02-test_data.py finish
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
   version, data_loading_header, data_ignore, logging_level, tables_type, attach_internal_libraries, cache_loaded_data, sticky_variables, underscore_variables, cache_file_format
  
  There is a new config item called cache_loaded_data which auto-caches data
  after it has been loaded from the data directory.  This has been switched
  off for this project in case it breaks your scripts.  However you can switch
  it on manually by editing global.dcf
  
  data_tables has been renamed tables_type.  It can take the value 'tibble', 
  'data_table', or 'data_frame.  If data_tables is TRUE, tables_type will be
  set to 'data_table', otherwise the default 'data_frame' will be used.  if you 
  wish a different default set it manually by editing global.dcf.  Future new
  projects will use 'tibble' by default.
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
   data_loading_header, data_ignore, logging_level, tables_type, attach_internal_libraries, cache_loaded_data, sticky_variables, underscore_variables, cache_file_format
  
  There is a new config item called cache_loaded_data which auto-caches data
  after it has been loaded from the data directory.  This has been switched
  off for this project in case it breaks your scripts.  However you can switch
  it on manually by editing global.dcf
  
  data_tables has been renamed tables_type.  It can take the value 'tibble', 
  'data_table', or 'data_frame.  If data_tables is TRUE, tables_type will be
  set to 'data_table', otherwise the default 'data_frame' will be used.  if you 
  wish a different default set it manually by editing global.dcf.  Future new
  projects will use 'tibble' by default.
  Migrating project configuration
  [1] FALSE
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   cache_loaded_data
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file contained unused entries which have been
  removed.  The unused entries are:
  Migrating project configuration
  [1] FALSE
  Migrating project configuration
  [1] TRUE
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   tables_type
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   tables_type
  Project name: test_project2144c87b38a209
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: .Random.seed config helper.function project.info
  Project name: test_project2144c86148a227
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c86148a227
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c8251e8ad4
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c8251e8ad4
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c870d404e2
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c870d404e2
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c81ba9253
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c8431fca66
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c8431fca66
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c855ad06a0
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c855ad06a0
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c81c866b61
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c81c866b61
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c832eff084
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c832eff084
  Loading project configuration
  Objects to clear from memory: config helper.function project.info
  Project name: test_project2144c813bc460c
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c813bc460c
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info
  Loading required package: qs
  qs 0.27.3. Announcement: https://github.com/qsbase/qs/issues/103
    Creating cache entry from global environment: cache.qs
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
    Creating cache entry from global environment: xxxx
  Migrating project configuration
  [1] FALSE
  Your existing project configuration in globals.dcf does not contain up to
  date configuration settings in this version 0.11.0 of ProjectTemplate.  They will
  be added automatically during migration, but you should review afterward.
  Your config.dcf file was missing entries and defaults
  have been used.  The missing entries are:
   cache_loaded_data
    Loading table: example_30a
    Loading table: example_30b
    Loading table: example_31a
    Loading table: example_31b
    Loading table: example_28
  re-encoding from CP1252
  re-encoding from CP1252
  Objects to clear from memory: .Random.seed config helper.function project.info test test_data12 test_data22
  Objects to clear from memory: config helper.function project.info
  Items in cache will not be cleared
  Use reload.project(reset=TRUE) to clear cache also
  Objects to clear from memory: helper.function project.info z
  Reloading Project ...
  Project name: test_project2144c841c9ba24
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading cached data set: z
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Objects to clear from memory: config helper.function project.info x y z
  Project name: test_project2144c831e320cc
  Loading project configuration
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c8333ef066
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  Project name: test_project2144c83278c6fc
  Loading project configuration
  Autoloading helper functions
   Running helper script: globals.R
   Running helper script: helpers.R
  Autoloading data
   Loading data set: file_not_in_full_template
   Translating data.frame to tibble: file_not_in_full_template
    Creating cache entry from global environment: file_not_in_full_template
  Munging data
   Running preprocessing script: 01-A.R
   Sourcing R script: 01-A.R
  [1] FALSE
  [ FAIL 1 | WARN 215 | SKIP 0 | PASS 909 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-readers.R:940:3'): Example 35: PPM Support with .ppm Extension ──
  `ppm.reader(data.file, filename, variable.name)` did not throw the expected warning.
  
  [ FAIL 1 | WARN 215 | SKIP 0 | PASS 909 ]
  Error: Test failures
  Execution halted