Running ‘testthat.R’ [313s/411s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > 
  > test_check("chouca")
  Loading required package: chouca
  This is chouca 0.1.99 (development version, use at your own risk!)
  See vignette("chouca-package") for a user guide or ?chouca for an overview
  using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’
  make[1]: Entering directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  make[1]: Leaving directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  make[1]: Entering directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I../inst/include -fopenmp  -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include" -I"/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14" -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c file129f68b8d8445.cpp -o file129f68b8d8445.o
  file129f68b8d8445.cpp: In function ‘void precompute_transition_probabilites(double (*)[3][3], const unsigned char (*)[4], const arma::uword*)’:
  file129f68b8d8445.cpp:133:13: warning: variable ‘qpointn_factorf’ set but not used [-Wunused-but-set-variable]
    133 |       uword qpointn_factorf;
        |             ^~~~~~~~~~~~~~~
  g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o sourceCpp_9.so file129f68b8d8445.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
  make[1]: Leaving directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  make[1]: Entering directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  make[1]: Leaving directory '/tmp/Rtmptwk88M/sourceCpp-x86_64-pc-linux-gnu-1.0.14/sourcecpp_129f6872c6cb3'
  iter =    0 (  0 %) BARE:0.333 ALGAE:0.325 CORAL:0.341 
  iter =  256 ( 25 %) BARE:0.5276 ALGAE:0.0107 CORAL:0.4617 [29.69 iter/s]
  iter =  512 ( 50 %) BARE:0.4529 ALGAE:0.0083 CORAL:0.5388 [29.01 iter/s]
  iter =  768 ( 75 %) BARE:0.40088 ALGAE:0.00537 CORAL:0.59375 [35.21 iter/s]
  iter = 1024 (100 %) BARE:0.35327 ALGAE:0.00708 CORAL:0.63965 [30.10 iter/s]
  iter =    0 (  0 %) BARE:0.333 ALGAE:0.325 CORAL:0.341 
  iter =  256 ( 25 %) BARE:0.52905 ALGAE:0.00977 CORAL:0.46118 [1053.50 iter/s]
  iter =  512 ( 50 %) BARE:0.44653 ALGAE:0.00586 CORAL:0.54761 [2000.00 iter/s]
  iter =  768 ( 75 %) BARE:0.39746 ALGAE:0.00562 CORAL:0.59692 [1163.64 iter/s]
  iter = 1024 (100 %) BARE:0.36670 ALGAE:0.00342 CORAL:0.62988 [1630.57 iter/s]
  dev.new(): using pdf(file="Rplots1.pdf")
  dev.new(): using pdf(file="Rplots2.pdf")
  dev.new(): using pdf(file="Rplots3.pdf")
  dev.new(): using pdf(file="Rplots4.pdf")
  dev.new(): using pdf(file="Rplots5.pdf")
  dev.new(): using pdf(file="Rplots6.pdf")
  Cellular Automaton landscape
  
  Size: 24x24
  
  EMPTY EMPTY VEGE  VEGE  DEGR  ...  
  VEGE  EMPTY EMPTY VEGE  EMPTY ...  
  DEGR  EMPTY EMPTY VEGE  EMPTY ...  
  EMPTY DEGR  VEGE  EMPTY EMPTY ...  
  EMPTY DEGR  EMPTY VEGE  DEGR  ...  
  ...   ...   ...   ...   ...   ...   
  
  Global covers
       DEGR     EMPTY      VEGE 
  0.3229167 0.3263889 0.3506944 
  
  The following methods are available: 
     image 
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 109 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-caspr.R:67:3'): (code run outside of `test_that()`) ──────────
  {
      ...
  } is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 109 ]
  Error: Test failures
  Execution halted