Maintainer: ‘Scott Fortmann-Roe <scottfr@berkeley.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Scott",
                    family = "Fortmann-Roe",
                    role = c("aut", "cre"),
                    email = "scottfr@berkeley.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  xtable.A3.Rd: print.xtable
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mintu Nath <dr.m.nath@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mintu",
                    family = "Nath",
                    role = c("aut", "cre"),
                    email = "dr.m.nath@gmail.com")
as necessary.
Maintainer: ‘Florian Lerch <lerch@mathematik.uni-marburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michael",
                      family = "Thrun",
                      role = "aut"),
               person(given = "Jorn",
                      family = "Lotsch",
                      role = "aut"),
               person(given = "Alfred",
                      family = "Ultsch",
                      role = "aut"),
               person(given = "Florian",
                      family = "Lerch",
                      role = "cre",
                      email = "lerch@mathematik.uni-marburg.de"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘SwissInhabitants.Rd’:
    \keyword{datasets,SwissInhabitants,SwissInhabitant [TRUNCATED]
Specified C++11: please drop specification unless essential
checkRd: (-1) abclass.Rd:133: Lost braces; missing escapes or markup?
   133 |     \code{abclass.control()} returns an object of class {abclass.control}
       |                                                         ^
checkRd: (-1) supclass.Rd:109: Lost braces; missing escapes or markup?
   109 | to solve the equivalent linear programming problem via the package {Rglpk}.
       |                                                                    ^
checkRd: (-1) supclass.Rd:110: Lost braces; missing escapes or markup?
   110 | It is recommended to use a recent version of {GLPK}.
       |                                              ^
Maintainer: ‘Abdulmonem Alsaleh <a.alsaleh@hotmail.co.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Abdulmonem",
                      family = "Alsaleh",
                      role = c("cre", "aut"),
                      email = "a.alsaleh@hotmail.co.nz"),
               person(given = "Robert",
                      family = "Weeks",
                      role = "aut"),
               person(given = "Ian",
                      family = "Morison",
                      role = "aut"),
               person(family = "RStudio",
                      role = "ctb"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
gfitpca 6.974  0.020  10.913
gfit    4.010  0.027   5.440
Maintainer: ‘Jean-Michel Marin <jean-michel.marin@umontpellier.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean-Michel",
                      family = "Marin",
                      role = c("aut", "cre"),
                      email = "jean-michel.marin@umontpellier.fr"),
               person(given = "Louis",
                      family = "Raynal",
                      role = "aut"),
               person(given = "Pierre",
                      family = "Pudlo",
                      role = "aut"),
               person(given = c("Christian", "P."),
                      family = "Robert",
                      role = "ctb"),
               person(given = "Arnaud",
                      family = "Estoup",
                      role = "ctb"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  abcrf.Rd: ranger
  covRegAbcrf.Rd: ranger
  densityPlot.Rd: ranger
  err.regAbcrf.Rd: ranger
  plot.regAbcrf.Rd: ranger
  predict.abcrf.Rd: ranger
  predict.regAbcrf.Rd: predict.ranger, ranger
  predictOOB.Rd: predict.ranger, ranger
  regAbcrf.Rd: ranger
  variableImpPlot.Rd: ranger
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  abctools-package.Rd: abc
  cov.pi.Rd: abc, postpr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Kevin M. Middleton <middletonk@missouri.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Kevin", "M."),
                      family = "Middleton",
                      role = c("aut", "cre"),
                      email = "middletonk@missouri.edu"),
               person(given = "Randall",
                      family = "Pruim",
                      role = "aut",
                      email = "rpruim@calvin.edu"))
as necessary.

Found the following (possibly) invalid file URIs:
  URI: middletonk@missouri.edu
    From: man/abd-package.Rd
  URI: rpruim@calvin.edu
    From: man/abd-package.Rd
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
plot.abe       12.036  0.135  18.280
pie.abe         8.250  0.062  10.687
abe.resampling  7.483  0.153  10.166
summary.abe     5.327  0.006   7.262
print.abe       4.391  0.041   6.579
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
detect_pk 14.725  0.014  19.155
detect_pm  7.337  0.024   8.610
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
ablasso_uv 4.459  0.028   5.621
checkRd: (-1) get_ex_data.Rd:31-32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) get_ex_data.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) get_ex_data.Rd:34-35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) get_ex_data.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tidy_results.Rd:28-29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tidy_results.Rd:30: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
energyVIZ 7.301  0.425  10.784
moveVIZ   4.753  0.137   6.575
moveSIM   4.308  0.138   5.408
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
buildScoreCache 3.964  0.452    5.05
Maintainer: ‘Jose Jimenez <jose@jimenezluna.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jose",
                    family = "Jimenez",
                    role = c("aut", "cre"),
                    email = "jose@jimenezluna.com")
as necessary.
Maintainer: ‘Matthew Kumar <mattkumar@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Kumar",
                    role = c("aut", "cre"),
                    email = "mattkumar@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot_posterior 4.352  0.232   5.822
Maintainer: ‘Adam J. Rothman <arothman@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Adam", "J."),
                    family = "Rothman",
                    role = c("aut", "cre"),
                    email = "arothman@umn.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
fit.pfc 5.482   0.01   6.133
Maintainer: ‘Gokmen Altay <altaylabs@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gokmen",
                    family = "Altay",
                    role = c("aut", "cre"),
                    email = "altaylabs@gmail.com")
as necessary.
checkRd: (-1) bind_tweets.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bind_tweets.Rd:22: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Daniel Amorese  <amorese@ipgp.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Amorese",
                    role = c("aut", "cre"),
                    email = "amorese@ipgp.fr")
as necessary.
Maintainer: ‘livio finos <livio.finos@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Livio",
                    family = "Finos",
                    role = c("aut", "cre"),
                    email = "livio.finos@unipd.it")
as necessary.
Maintainer: ‘Dane R. Van Domelen <vandomed@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dane", "R."),
                    family = "Van Domelen",
                    role = c("aut", "cre"),
                    email = "vandomed@gmail.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘accelerometry.Rd’:
    https://doi.org/10.7287/peerj.preprints.3188v1
Maintainer: ‘Jung Ae Lee <jungaeleeb@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jung", "Ae"),
                    family = "Lee",
                    role = c("aut", "cre"),
                    email = "julee@uark.edu")
as necessary.
checkRd: (-1) accelimp.Rd:15: Lost braces
    15 | \item[]{...}
       |        ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  mice.impute.2l.zip.pmm.Rd: mice
  mice.impute.2l.zipln.Rd: mice
  mice.impute.2l.zipln.pmm.Rd: mice
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
accel.impute 4.844  0.209    6.58
Found the following files/directories:
  ‘acceldata2.RData’
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
excursion             5.529  0.348   6.970
step1_down            4.392  0.179   5.730
step1_plot_T          4.333  0.057   5.908
step1_plot_diagnostic 4.284  0.074   6.020
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
inspect 4.519  0.028   5.551
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
rmd2many 4.634  0.442    7.34
Maintainer: ‘Jaejoon Song <jjsong2@mdanderson.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jaejoon",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "jjsong2@mdanderson.org"),
               person(given = c("Matthew", "G."),
                      family = "Cox",
                      role = "aut"))
as necessary.
Maintainer: ‘Gudmundur Einarsson <gumeo140688@gmail.com>’

The Description field contains
  <arXiv:1705.07194>).  Functions for performing cross validation are
  the package (See Ames and Hong, <arXiv:1401.5492>). See the 'github'
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
ASDA 3.458  0.044    5.08
Maintainer: ‘Markus Belfrage <markus.belfrage@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Markus",
                    family = "Belfrage",
                    role = c("aut", "cre"),
                    email = "markus.belfrage@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  acdFit.Rd: solnp
  plotScatterAcd.Rd: stat_smooth
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Antony M. Overstall <A.M.Overstall@soton.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Antony", "M."),
                      family = "Overstall",
                      role = c("aut", "cre"),
                      email = "a.m.overstall@soton.ac.uk"),
               person(given = c("David", "C."),
                      family = "Woods",
                      role = "aut"),
               person(given = c("Maria", "Adamou", "&", "Damianos"),
                      family = "Michaelides",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) overstallwoods.Rd:184-185: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) overstallwoods.Rd:186-187: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) overstallwoods.Rd:188-189: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) overstallwoods.Rd:190-191: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
aceglm           11.208  0.378   5.873
acebayes-package  6.624  0.298   3.552
Examples with CPU time > 2.5 times elapsed time
        user system elapsed ratio
acenlm 1.835  0.068   0.759 2.507
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
ace.test 5.081  0.008   7.007
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘acep_load_base.Rd’ ‘acep_rst.Rd’ ‘acep_token_plot.R’
    ‘acep_token_table.R’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
acep_clean 0.79  0.058   6.066
Maintainer: ‘Vladimir Polony <podalv@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vladimir",
                    family = "Polony",
                    role = c("aut", "cre"),
                    email = "podalv@gmail.com")
as necessary.
Maintainer: ‘Liang He <hyx520101@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Liang",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "hyx520101@gmail.com")
as necessary.
Maintainer: ‘Higor Cotta <cotta.higor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Higor",
                      family = "Cotta",
                      role = c("aut", "cre"),
                      email = "cotta.higor@gmail.com"),
               person(given = "Valderio",
                      family = "Reisen",
                      role = "aut"),
               person(given = "Pascal",
                      family = "Bondon",
                      role = "aut"),
               person(given = "Céline",
                      family = "Lévy-Leduc",
                      role = "aut"))
as necessary.
Maintainer: ‘Alexander Sohn <asohn@uni-goettingen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexander",
                    family = "Sohn",
                    role = c("aut", "cre"),
                    email = "asohn@uni-goettingen.de")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  doACNE.Rd: AffymetrixCelSet, Verbose
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Morgane Pierre-Jean <morgane.pierrejean@genopole.cnrs.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Tomas Bacigal <bacigal@math.sk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tomas",
                    family = "Bacigal",
                    role = c("aut", "cre"),
                    email = "bacigal@math.sk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
xCopula 5.798  0.072   7.536
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘acoRn.R’ ‘clean_input.R’ ‘create_mock_dataset.R’
    ‘exclude_duplicates.R’ ‘find_parents.R’ ‘identify_duplicates.R’
Maintainer: ‘Siakoulis Vasilios <Siakoulis.Vasilios@atticabank.gr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Siakoulis",
                      family = "Vasileios",
                      role = "aut"),
               person(given = "Siakoulis",
                      family = "Vasilios",
                      role = "cre",
                      email = "Siakoulis.Vasilios@atticabank.gr"))
as necessary.
Maintainer: ‘Sam Buttrey <buttrey@nps.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dave",
                      family = "Ruth",
                      role = "aut"),
               person(given = "Sam",
                      family = "Buttrey",
                      role = c("aut", "cre"),
                      email = "buttrey@nps.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  rRegMatch.Rd: daisy, treeClust.dist
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
No examples, no tests, no vignettes
Maintainer: ‘Henrik Singmann <singmann+acss@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
acss 7.598  0.811   10.78
Maintainer: ‘Prabhanjan Tattar <prabhanjannt@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Prabhanjan",
                    family = "Tattar",
                    role = c("aut", "cre"),
                    email = "prabhanjannt@gmail.com")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘Disease.Rd’:
    \keyword{residual analysis, logistic regression}
  File ‘bs.Rd’:
    \keyword{score function, binomial distribution}
  File ‘chest.Rd’:
    \keyword{rootogram, militiamen}
  File ‘cloud.Rd’:
    \keyword{stem-and-leaf plot, cloud seeding experim [TRUNCATED]
  File ‘cork.Rd’:
    \keyword{multivariate dataset, singular value deco [TRUNCATED]
  File ‘cs.Rd’:
    \keyword{Cauchy random samples, score function}
  File ‘depression.Rd’:
    \keyword{Wilcoxon test, Hamilton depression scale} [TRUNCATED]
  File ‘flight.Rd’:
    \keyword{transformation, variance reduction}
  File ‘lowbwt.Rd’:
    \keyword{logistic regression, model selection}
  File ‘memory.Rd’:
    \keyword{fivenum, IQR}
checkRd: (-1) Ehrenfest.Rd:19: Lost braces
    19 | In this experiment there are i balls in Urn I, and remaining 2n-i balls in Urn II. Then at any instance, the probability of selecting a ball from Urn I and placing it in Urn II is i/2n, and the other way of placing a ball from Urn II to Urn I is (2n-i)/2n. At each instant we let the number i of balls in the Urn I to be the state of the system. Thus, the state space is S = { 0, 1, 2, \ldots, 2n }. Then we can pass from state i only to either of the states i-1 or i+1.
       |                                                                                                                                                                                                                                                                                                                                                                                        ^
checkRd: (-1) Ehrenfest.Rd:20: Lost braces
    20 | Here, S = {0, 1, \ldots, 2n}. 
       |           ^
Maintainer: ‘Wenchao Ma <wenchao.ma@ua.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chia-Yi",
                      family = "Chiu",
                      role = "aut",
                      comment = "University of Minnesota"),
               person(given = "Wenchao",
                      family = "Ma",
                      role = c("aut", "cre"),
                      email = "wenchao.ma@ua.edu",
                      comment = "The University of Alabama"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
IS_long 3.322  0.027    5.04
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
fragmentation_long 6.839   0.13   8.059
Maintainer: ‘Jairo Hidalgo Migueles <jairo.hidalgo.migueles@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jairo", "Hidalgo"),
                    family = "Migueles",
                    role = c("aut", "cre"),
                    email = "jairo.hidalgo.migueles@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compute_accumulation_metrics.R’
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot_data      6.380  0.052   9.288
compute_mets   3.976  0.194   5.883
mark_wear_time 3.208  0.096   5.124
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
summary.act_tbl   5.264  0.004   6.856
parse_tcx         3.775  0.039   5.035
mutate_with_speed 3.269  0.218   5.157
Maintainer: ‘Nathan Wycoff <nathan.wycoff@georgetown.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nathan",
                      family = "Wycoff",
                      role = c("aut", "cre"),
                      email = "nathan.wycoff@georgetown.edu"),
               person(given = "Mickael",
                      family = "Binois",
                      role = "aut"))
as necessary.
Maintainer: ‘Marcus Rowcliffe <marcus.rowcliffe@ioz.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marcus",
                    family = "Rowcliffe",
                    role = c("aut", "cre"),
                    email = "marcus.rowcliffe@ioz.ac.uk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
bin_data             17.299  0.349  24.733
read_clock_lab_files 14.994  0.026  19.692
plot_actogram        14.888  0.065  19.001
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  adjustIntercept.Rd: cpglm, cpglmm, data.table
  findbars.Rd: mkRespMod, mkReTrms, nlformula, subbars
  plotRE.Rd: ggplot2, ggplot
  weights-actuaRE.Rd: cpglm
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
File ‘actuar/libs/actuar.so’:
  Found non-API call to R: ‘OBJECT’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Eleanor Caves <eleanor.caves@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eleanor",
                      family = "Caves",
                      role = c("aut", "cre"),
                      email = "eleanor.caves@gmail.com"),
               person(given = "Sönke",
                      family = "Johnsen",
                      role = "aut"))
as necessary.
Found the following files/directories:
  ‘Example.jpeg’
Maintainer: ‘Esteban Alfaro <Esteban.Alfaro@uclm.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Alfaro",
                      role = "aut"),
               person(given = "Esteban;",
                      family = "Gamez",
                      role = "aut"),
               person(family = "Matias",
                      role = "aut"),
               person(family = "Garcia",
                      role = "aut"),
               person(given = c("Noelia;", "with", "contributions", "from", "L."),
                      family = "Guo",
                      role = "aut"),
               person(given = "A.",
                      family = "Albano",
                      role = "aut"),
               person(given = "M.",
                      family = "Sciandra",
                      role = "aut"),
               person(given = "A.",
                      family = "Plaia",
                      role = "aut"),
               person(given = "Esteban",
                      family = "Alfaro",
                      role = "cre",
                      email = "Esteban.Alfaro@uclm.es"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  autoprune.rd: rpart
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) est_S_Plus_Plus_MethodA.Rd:31: Lost braces; missing escapes or markup?
    31 |   \item{trt_diff}{Estimate of treatment difference for S_{++} using Method A}
       |                                                          ^
checkRd: (-1) est_S_Plus_Plus_MethodB.Rd:31: Lost braces; missing escapes or markup?
    31 |   \item{trt_diff}{Estimate of treatment difference for S_{++} using Method B}
       |                                                          ^
checkRd: (-1) est_S_Star_Plus_MethodA.Rd:29: Lost braces; missing escapes or markup?
    29 |   \item{trt_diff}{Estimate of treatment difference for S_{++} using Method A}
       |                                                          ^
checkRd: (-1) est_S_Star_Plus_MethodB.Rd:29: Lost braces; missing escapes or markup?
    29 |   \item{trt_diff}{Estimate of treatment difference for S_{*+} using Method B}
       |                                                          ^
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
est_S_Plus_Plus_MethodA 4.884  0.137   5.666
est_S_Plus_Plus_MethodB 4.620  0.091   5.194
Specified C++11: please drop specification unless essential
Maintainer: ‘Erkut Tekeli <etekeli@atu.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zeynel",
                      family = "Cebeci",
                      role = c("aut", "cre")),
               person(given = "Erkut",
                      family = "Tekeli",
                      role = c("aut", "cre"),
                      email = "etekeli@atu.edu.tr"),
               person(given = "Cagatay",
                      family = "Cebeci",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) adana.Rd:25: Lost braces; missing escapes or markup?
    25 |   \item{gatype}{Type of GA. \itemize{\item{"gga": generational GA}  \item{"ssga": steady state GA} } {Default value is "gga"}}
       |                                                                                                      ^
checkRd: (-1) adana.Rd:26: Lost braces; missing escapes or markup?
    26 |   \item{objective}{Type of optimization. \itemize{\item{"min": minimization}  \item{"max": maximization} } {Default value is "max"}}
       |                                                                                                            ^
checkRd: (-1) adana.Rd:34: Lost braces; missing escapes or markup?
    34 |                  {Default value is "initbin"}}
       |                  ^
checkRd: (-1) adana.Rd:56: Lost braces; missing escapes or markup?
    56 |                \itemize{\item{"integer"}  \item{"real"} } {Default value is "real"}}
       |                                                           ^
checkRd: (-1) adana.Rd:185: Lost braces; missing escapes or markup?
   185 |     {Default value is "w"}
       |     ^
Maintainer: ‘Dong Zhang <dzhang0716@126.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dong",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "dzhang0716@126.com")
as necessary.

Found the following (possibly) invalid file URIs:
  URI: dzhang0716@126.com
    From: man/rARS.Rd
  URI: dzhang0716@126.com
    From: man/rASS.Rd
  URI: dzhang0716@126.com
    From: man/rCCARS.Rd
  URI: dzhang0716@126.com
    From: man/rMARS.Rd
Maintainer: ‘Julia Fukuyama <julia.fukuyama@gmail.com>’

The Description field contains
  <arXiv:1702.00501>. The package also includes functionality for
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Andreas Scheidegger <andreas.scheidegger@eawag.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Andreas",
                      family = "Scheidegger",
                      role = c("aut", "cre"),
                      email = "andreas.scheidegger@eawag.ch"),
               person(role = "aut",
                      email = "andreas.scheidegger@eawag.ch"),
               person(role = "aut",
                      email = "scheidegger.a@gmail.com"))
as necessary.
Maintainer: ‘Lihua Lei <lihua.lei@berkeley.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  (2016) <arXiv:1609.06035>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) adapt.Rd:46: Lost braces
    46 | \item{qvals}{a vector of values in [0, 1]U{Inf}. Q-values. See Details}
       |                                           ^
checkRd: (-1) corr_lfdr.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) corr_lfdr.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) corr_lfdr.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) corr_lfdr.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) corr_lfdr.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ctgm_lfdr.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ctgm_lfdr.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) plot_2d.Rd:40: Lost braces; missing escapes or markup?
    40 | \code{plot_2d_lfdr} gives the contour plot of local FDR estimates when all p-values are equal to \code{targetp}. It is recommended to run \code{plot_2d_lfdr} for multiple \code{targetp}'s ranging from {0.001, 0.005, 0.01, 0.05}.
       |                                                                                                                                                                                                          ^
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot_convergence 4.501    0.2   6.602
Maintainer: ‘Samuel A Danziger <sam.danziger@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Samuel", "A"),
                    family = "Danziger",
                    role = c("aut", "cre"),
                    email = "sam.danziger@gmail.com")
as necessary.
checkRd: (-1) SVMDECON.Rd:23: Lost braces; missing escapes or markup?
    23 | and the best result from three values of v = {0.25, 0.5, 0.75}
       |                                              ^
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
AugmentSigMatrix 4.19  0.022    5.44
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
a1Table 6.961  0.001   8.902
Maintainer: ‘Mark Culp <mvculp@mail.wvu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mark",
                      family = "Culp",
                      role = c("aut", "cre"),
                      email = "mvculp@mail.wvu.edu"),
               person(given = "Kjell",
                      family = "Johnson",
                      role = "aut"),
               person(given = "George",
                      family = "Michailidis",
                      role = "aut"))
as necessary.
checkRd: (-1) ada.Rd:171: Escaped LaTeX specials: \&
Maintainer: ‘Pengyi Yang <yangpy7@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pengyi",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "yangpy7@gmail.com")
as necessary.
Maintainer: ‘Fabio Centofanti <fabio.centofanti@unina.it>’

The BugReports field in DESCRIPTION has
  https://github.com/unina-sfere/adass
which should likely be
  https://github.com/unina-sfere/adass/issues
instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
adass.fr 3.492  0.134   5.355
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
fp_alias_matrix 4.009  0.082   5.127
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AdbiConnection-class.Rd: DBIConnection-class, DBIDriver-class
  AdbiDriver-class.Rd: dbConnect, DBIDriver-class, DBIConnection-class
  AdbiResult-class.Rd: DBIResult-class, DBIObject-class,
    DBIDriver-class, DBIConnection-class
  AdbiResultArrow-class.Rd: DBIResultArrow-class, DBIResult-class,
    DBIObject-class, DBIDriver-class, DBIConnection-class
  dbConnect.Rd: DBIDriver-class, DBIConnection-class, dbConnect,
    dbDisconnect
  dbFetch.Rd: dbFetch, DBIResult-class
  dbSendQuery.Rd: dbSendQuery, dbGetQuery, DBIConnection-class, dbBind,
    DBIResult-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Yalin Zhu <yalin.zhu@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yalin",
                    family = "Zhu",
                    role = c("aut", "cre"),
                    email = "yalin.zhu@outlook.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
BioInfo.Power 4.925  0.009    5.74
Maintainer: ‘Petr Simecek <simecek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Marie",
                      family = "Simeckova",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Rusch",
                      role = "aut"),
               person(given = "Petr",
                      family = "Simecek",
                      role = "cre",
                      email = "simecek@gmail.com"))
as necessary.
Maintainer: ‘Mark W. Donoghoe <markdonoghoe@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
addreg 6.554  0.049   8.969
Maintainer: ‘Yili Hong <yilihong@vt.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yili",
                      family = "Hong",
                      role = c("aut", "cre"),
                      email = "yilihong@vt.edu"),
               person(given = "Yimeng",
                      family = "Xie",
                      role = "aut"),
               person(given = "Zhongnan",
                      family = "Jin",
                      role = "aut"),
               person(given = "Caleb",
                      family = "King",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
fourthcorner 4.897  0.000   6.664
maples       4.234  0.103   5.023
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot.cv.grpnet 4.856  0.226   3.368
Maintainer: ‘Marta Karas <marta.karass@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
segmentWalking 5.125  0.497   6.977
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
pso 14.558  0.022  17.206
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
msr.4thcorner 5.073  0.003   6.806
mspa          4.722  0.113   6.360
aem.time      4.022  0.052   5.664
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘IntervalEstimator-class.Rd’ ‘PValue-class.Rd’
    ‘PointEstimator-class.Rd’ ‘analyze.R’ ‘estimators.R’
    ‘evaluate_estimator.R’ ‘fisher_information.R’
    ‘integrate_over_sample_space.R’ ‘mle_distribution.R’ ‘n2c2_helpers.R’
    ‘plot.R’ ‘print.R’ ‘reference_implementation.R’
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
EstimatorScore-class       5.969  0.087   7.594
evaluate_estimator-methods 6.005  0.040   9.643
evaluate_estimator         5.864  0.007   8.407
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘blocks.R’ ‘compress.R’ ‘connect_adf.R’ ‘demo.R’ ‘device_create.R’
    ‘entry_info.R’ ‘helpers.R’ ‘move.R’ ‘move.Rd’ ‘s3_conn.R’
    ‘s3_methods.R’ ‘virtual_path.R’
Maintainer: ‘Carlos J. Gil Bellosta <cgb@datanalytics.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Carlos", "J.", "Gil"),
                    family = "Bellosta",
                    role = c("aut", "cre"),
                    email = "cgb@datanalytics.com")
as necessary.
Malformed Description field: should contain one or more complete sentences.
Maintainer: ‘Dan Dediu <ddediu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) med.groups.Rd:20: Lost braces; missing escapes or markup?
    20 | medication groups using the construction \emph{"{NAME}"}.
       |                                                 ^
checkRd: (-1) med.groups.Rd:26: Lost braces; missing escapes or markup?
    26 | Another example is "NotVita" defined as "(!{Vitamines})", which selects all
       |                                            ^
Maintainer: ‘Dan Dediu <ddediu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sandrine Pavoine <sandrine.pavoine@mnhn.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sandrine",
                    family = "Pavoine",
                    role = c("aut", "cre"),
                    email = "sandrine.pavoine@mnhn.fr")
as necessary.
Maintainer: ‘E. F. Haghish <haghish@uio.no>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("E.", "F."),
                    family = "Haghish",
                    role = c("aut", "cre"),
                    email = "haghish@uio.no")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
boot.adjroc 8.611  0.120  11.580
boot.roc    6.244  0.025   8.905
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
adjusted_curve_diff 5.832  0.185   7.750
adjustedcif         4.200  0.060   5.528
surv_prox_iptw      4.176  0.039   5.008
'::' or ':::' import not declared from: ‘devtools’
'library' or 'require' calls not declared from:
  ‘ggmap’ ‘gridExtra’ ‘magick’
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
derive_param_confirmed_bor  7.057  0.044   8.694
derive_param_confirmed_resp 6.808  0.055   8.530
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
derive_var_joined_exist_flag 7.882  0.008   9.835
derive_vars_joined           5.163  0.000   6.658
filter_joined                5.035  0.020   7.329
derive_param_tte             4.712  0.000   6.444
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
factorize     6.727  0.025   8.814
SOPexpression 4.656  0.206   6.544
Maintainer: ‘David Ardia <david.ardia.ch@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Polina Bombina <pbombina@crimson.ua.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Brendan",
                      family = "Ames",
                      role = "aut",
                      email = "bpames@ua.edu"),
               person(given = "Polina",
                      family = "Bombina",
                      role = c("aut", "cre"),
                      email = "pbombina@crimson.ua.edu"))
as necessary.

The Description field contains
  sampled binary matrix, Bombina et al. (2019) <arXiv:1904.03272>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Adrian Timpson <a.timpson@ucl.ac.uk>’

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Cole Monnahan <monnahc@uw.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cm_formula.R’ ‘tag_add.R’
Maintainer: ‘Yifan (Ethan) Xu <ethan.yifanxu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  http://smm.sagepub.com/content/early/2015/10/15/0962280215609948.abstract.
Please enclose URLs in angle brackets (<...>).
Maintainer: ‘Pankaj Bhatlawande <pbhatlawande@merkleinc.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pankaj",
                    family = "Bhatlawande",
                    role = c("aut", "cre"),
                    email = "pbhatlawande@merkleinc.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  kdfun.Rd: divc
  krfun.Rd: divc
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Jader Lugon Junior <jlugonjr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jader", "Lugon"),
                      family = "Junior",
                      role = c("aut", "cre"),
                      email = "jlugonjr@gmail.com"),
               person(given = c("Pedro", "Paulo", "Gomes", "Watts"),
                      family = "Rodrigues",
                      role = "aut"),
               person(given = "Luiz",
                      family = "Bevilacqua",
                      role = "aut"),
               person(given = c("Gisele", "Moraes"),
                      family = "Marinho",
                      role = "aut"),
               person(given = c("Diego", "Campos"),
                      family = "Knupp",
                      role = "aut"),
               person(given = c("Joao", "Flavio", "Vieira"),
                      family = "Vasconcellos",
                      role = "aut"),
               person(given = c("Antonio", "Jose", "da", "Silva"),
                      family = "Neto.",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
AdvDif4 5.52  0.004   6.944
Maintainer: ‘Murray Cox <murray.p.cox@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean",
                      family = "Sanderson",
                      role = "aut"),
               person(given = "Murray",
                      family = "Cox",
                      role = "cre",
                      email = "murray.p.cox@gmail.com"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘admix.Rd’:
    https://doi.org/10.1534/genetics.115.176842
    https://doi.org/10.1101/gr.083634.108
  File ‘plotsignal.Rd’:
    https://doi.org/10.1534/genetics.115.176842
  File ‘signal.Rd’:
    https://doi.org/10.1534/genetics.115.176842
  File ‘wavesum.Rd’:
    https://doi.org/10.1534/genetics.115.176842
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
get_series 1.514  0.114   5.592
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
autoplot                    12.747  0.275  15.454
plot                        10.007  0.036  14.582
predict.tsd_onset            8.817  0.011  12.454
historical_summary           6.255  0.012   8.240
consecutive_growth_warnings  5.181  0.011   6.195
Maintainer: ‘Michael Kleinsasser <mkleinsa@umich.edu>’

The Description field contains
  <arXiv:2007.02266>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) count_cases.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_cases.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_cases.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_cases.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_cases.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:84: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:85: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) enrich.Rd:88: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitaep.Rd:14: Lost braces
    14 | \item A sequence of goodness-of-fit measures consist of Akaike Information Criterion (\code{AIC}), Consistent Akaike Information Criterion (\code{CAIC}), Bayesian Information Criterion (\code{BIC}), Hannan-Quinn information criterion (\code{HQIC}), Anderson-Darling (\code{AD}), Cram\'{e}er-von Misses (\code{CVM}), Kolmogorov-Smirnov (\code{KS}), and log-likelihood (\code{log-likelihood}) statistics.
       |                                                                                                                                                                                                                                                                                              ^
Maintainer: ‘"Jose Oteros" <OterosJose@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jesus",
                      family = "Rojo",
                      role = "aut",
                      email = "Jesus.Rojo@uclm.es"),
               person(given = "Antonio",
                      family = "Picornell",
                      role = "aut",
                      email = "picornell@uma.es"),
               person(given = "Jose",
                      family = "Oteros",
                      role = "aut",
                      email = "OterosJose@gmail.com"),
               person(given = "\"Jose",
                      family = "Oteros\"",
                      role = "cre",
                      email = "OterosJose@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
plot_hour       6.869  0.064   9.007
calculate_ps    5.064  0.094   7.208
quality_control 4.856  0.138   5.977
Found the following files/directories:
  ‘table_AeRobiology’
Maintainer: ‘Mark Hogue <mark.hogue.chp@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mark",
                    family = "Hogue",
                    role = c("aut", "cre"),
                    email = "mark.hogue.chp@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘report_basic.R’ ‘report_cum_plots.R’ ‘report_log_mass.R’
    ‘report_plots.R’ ‘set_params_2.R’
Running ‘Ch-Basics.R’ [2s/3s]
  Comparing ‘Ch-Basics.Rout’ to ‘Ch-Basics.Rout.save’ ... OK
  Running ‘Ch-Intro.R’ [3s/4s]
  Comparing ‘Ch-Intro.Rout’ to ‘Ch-Intro.Rout.save’ ... OK
  Running ‘Ch-LinearRegression.R’ [6s/8s]
  Comparing ‘Ch-LinearRegression.Rout’ to ‘Ch-LinearRegression.Rout.save’ ...46,51c46,51
<  Min.   :   2   Min.   :  20   Min.   : 0.00522  
<  1st Qu.:  52   1st Qu.: 134   1st Qu.: 0.46449  
<  Median : 122   Median : 282   Median : 1.32051  
<  Mean   : 197   Mean   : 418   Mean   : 2.54846  
<  3rd Qu.: 268   3rd Qu.: 541   3rd Qu.: 3.44017  
<  Max.   :1098   Max.   :2120   Max.   :24.45946  
---
>  Min.   :   2   Min.   :  20   Min.   : 0.005  
>  1st Qu.:  52   1st Qu.: 134   1st Qu.: 0.464  
>  Median : 122   Median : 282   Median : 1.321  
>  Mean   : 197   Mean   : 418   Mean   : 2.548  
>  3rd Qu.: 268   3rd Qu.: 541   3rd Qu.: 3.440  
>  Max.   :1098   Max.   :2120   Max.   :24.459  
886c886
< -0.619068 -0.025568  0.000000 -0.000134  0.033201  0.641027 
---
> -0.6191 -0.0256  0.0000 -0.0001  0.0332  0.6410 
  Running ‘Ch-Microeconometrics.R’ [3s/4s]
  Comparing ‘Ch-Microeconometrics.Rout’ to ‘Ch-Microeconometrics.Rout.save’ ... OK
  Running ‘Ch-Programming.R’ [29s/38s]
  Comparing ‘Ch-Programming.Rout’ to ‘Ch-Programming.Rout.save’ ... OK
  Running ‘Ch-TimeSeries.R’ [5s/6s]
  Comparing ‘Ch-TimeSeries.Rout’ to ‘Ch-TimeSeries.Rout.save’ ... OK
  Running ‘Ch-Validation.R’ [48s/63s]
  Comparing ‘Ch-Validation.Rout’ to ‘Ch-Validation.Rout.save’ ... OK
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘colour_table.R’ ‘save_govuk.Rd’
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
aov_car 5.313  0.151   6.845
Maintainer: ‘Hsiao-Ting Huang <nikkihuang309700034@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hsiao-Ting",
                    family = "Huang",
                    role = c("aut", "cre"),
                    email = "lchen723@nccu.edu.tw")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
Boosting 6.763  0.215   8.788
checkRd: (-1) estimate.affinity.matrix.Rd:31: Lost braces; missing escapes or markup?
    31 | than \code{Y}, then those variables that appear in \code{X} but no in {Y}
       |                                                                       ^
checkRd: (-1) estimate.affinity.matrix.lowrank.Rd:36: Lost braces; missing escapes or markup?
    36 | \code{Y}, then those variables that appear in \code{X} but no in {Y} should
       |                                                                  ^
checkRd: (-1) show.correlations.Rd:47: Lost braces
    47 | code{ndims} dimensions. Defaults to all dimensions unless the latter are
       |     ^
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
estimate.affinity.matrix 5.365  0.184   7.811
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
domath 9.148  0.101   12.67
Maintainer: ‘Elisabeth Dahlqwist <elisabeth.dahlqwist88@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Elisabeth",
                    family = "Dahlqwist",
                    role = c("aut", "cre"),
                    email = "elisabeth.dahlqwist88@gmail.com")
as necessary.
checkRd: (-1) getNetworkGridLayout.Rd:6-11: Lost braces
     6 | getCoordinatesFromVertexId2<-function(AFMImage, vId) {
       |                                                      ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AFM.Rd: gstat, fractaldim, rgl
  AFMFractalDimensionAnalyser-getFractalDimensions.Rd: fractaldim
  AFMImageFractalDimensionMethod-class.Rd: fractaldim
  AFMImageNetworksAnalysis-class.Rd: igraph
  AFMImageVariogramAnalysis-evaluateVariogramModels-method.Rd: gstat
  displayHolesIn3D.Rd: rgl
  displayIn3D.Rd: rgl
  exportToSTL.Rd: rgl
  getCircleSpatialPoints.Rd: SpatialPoints
  putImagesFromAnalysisOnDisk.Rd: rgl
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Rafael Benitez <rabesua@uv.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rafael",
                      family = "Benitez",
                      role = c("aut", "cre"),
                      email = "rabesua@uv.es"),
               person(given = c("Vicente", "Jose"),
                      family = "Bolos",
                      role = "aut"),
               person(given = "Jose-Luis",
                      family = "Toca-Herrera",
                      role = "aut"))
as necessary.
Maintainer: ‘Elisabeth Dahlqwist <elisabeth.dahlqwist88@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Elisabeth",
                      family = "Dahlqwist",
                      role = c("aut", "cre"),
                      email = "elisabeth.dahlqwist88@gmail.com"),
               person(given = "Arvid",
                      family = "Sjolander",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘am_data.Rd’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘generate_workbook.Rd’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
wbyscrku 13.905  0.059  18.024
rglwbysu 10.943  0.044  12.851
wbyAgmv   7.342  0.073   9.112
rglwbysm  5.528  0.051   6.864
aftbybmv  4.678  0.141   5.943
rglaft    4.424  0.001   5.451
Maintainer: ‘Benjamin Auder <benjamin.auder@universite-paris-saclay.fr>’

The Description field contains
  Maillard, Sylvain Arlot, Matthieu Lerasle (2021) <arXiv:1909.04890>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Matthias Bogaert <matthias.bogaert@ugent.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Matthias",
                      family = "Bogaert",
                      role = c("aut", "cre"),
                      email = "matthias.bogaert@ugent.be"),
               person(given = "Michel",
                      family = "Ballings",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Maintainer: ‘Lynn Yi <lynnyi@caltech.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Lynn",
                      family = "Yi",
                      role = c("aut", "cre"),
                      email = "lynnyi@caltech.edu"),
               person(given = "Lior",
                      family = "Pachter",
                      role = "aut"))
as necessary.
Maintainer: ‘Alex Stringer <alex.stringer@uwaterloo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alex",
                    family = "Stringer",
                    role = c("aut", "cre"),
                    email = "alex.stringer@uwaterloo.ca")
as necessary.

The Description field contains
  Package" <arXiv:2101.04468>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Kenji Kondo <kkondo.odnokk@gmail.com>’

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AccurateGLM-class.Rd: cv.glmnet
  coef.AccurateGLM.Rd: coef.glmnet
  predict.AccurateGLM.Rd: predict.glmnet
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Dai Feng <daifeng.stat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dai",
                    family = "Feng",
                    role = c("aut", "cre"),
                    email = "daifeng.stat@gmail.com")
as necessary.
Maintainer: ‘Felipe de Mendiburu <fmendiburu@lamolina.edu.pe>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Felipe",
                    family = "de Mendiburu",
                    role = c("aut", "cre"),
                    email = "fmendiburu@lamolina.edu.pe")
as necessary.
Maintainer: ‘Chun-Han Lee <d10621201@ntu.edu.tw>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Chun-Han", "Lee"),
                      family = "<lyliu@ntu.edu.tw>",
                      role = "aut",
                      email = "lyliu@ntu.edu.tw"),
               person(given = "Chun-Han",
                      family = "Lee",
                      role = "cre",
                      email = "d10621201@ntu.edu.tw"))
as necessary.
Maintainer: ‘Rodney Edmondson <rodney.edmondson@gmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘agriTutorial.Rd’:
    http://dx.doi.org/10.1111/jac.12267
  File ‘example1.Rd’:
    http://dx.doi.org/10.1111/jac.12267
  File ‘example2.Rd’:
    http://dx.doi.org/10.1111/jac.12267
  File ‘example3.Rd’:
    http://dx.doi.org/10.1111/jac.12267
  File ‘example4.Rd’:
    http://dx.doi.org/10.1111/jac.12267
  File ‘example5.Rd’:
    http://dx.doi.org/10.1111/jac.12267
Maintainer: ‘Didier Ruedin <didier.ruedin@unine.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Didier",
                    family = "Ruedin",
                    role = c("ctb", "aut", "cre"),
                    email = "didier.ruedin@unine.ch")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
sketch            5.528  0.000   7.122
summarise_anova   4.788  0.016   6.006
summarise_dunnett 4.467  0.004   5.500
DICT              4.118  0.082   6.067
DIC               4.149  0.011   5.302
grid.onefactor    3.956  0.051   5.038
Maintainer: ‘Anna Cheshkova <cheshanf@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anna",
                    family = "Cheshkova",
                    role = c("aut", "cre"),
                    email = "cheshanf@gmail.com")
as necessary.
Maintainer: ‘Berent Ånund Strømnes Lunde <lundeberent@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Berent", "Ånund", "Strømnes"),
                    family = "Lunde",
                    role = c("aut", "cre"),
                    email = "lundeberent@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
'::' or ':::' import not declared from: ‘xgboost’
'library' or 'require' calls not declared from:
  ‘ISLR’ ‘dplyr’ ‘ggplot2’ ‘glmnet’ ‘gridExtra’ ‘lightgbm’
  ‘randomForest’ ‘xgboost’
Maintainer: ‘Anders Gorst-Rasmussen <agorstras@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
color_ramps      10.095  0.177  13.630
simDynocc         5.446  0.089   6.482
simIDS            5.035  0.123   6.231
simComm           4.727  0.255   6.508
simDynoccSpatial  3.810  0.255   5.085
Maintainer: ‘Chengyuan Lu <c.lu@lumc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chengyuan",
                    family = "Lu",
                    role = c("aut", "cre"),
                    email = "c.lu@lumc.nl")
as necessary.

The Description field contains
  Lu(2021) <arXiv:2004.06156>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
fit 6.868  0.084   8.737
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
ahp.ri 4.286  0.015   5.268
Maintainer: ‘Amarnath Bose <amarnath.bose@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Amarnath",
                    family = "Bose",
                    role = c("aut", "cre"),
                    email = "amarnath.bose@gmail.com",
                    comment = c(ORCID = "0000-0003-1560-6745"))
as necessary.
Maintainer: ‘Abdisalam Hassan Muse <abdisalam.h.muse@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Authors@R.",
                      family = "c)",
                      role = "aut",
                      comment = "\"aut\", \"ctb\",\"cre\""),
               person(family = "person)",
                      role = "aut",
                      comment = "\"ctb\""),
               person(family = "person)",
                      role = "aut",
                      comment = "\"ctb\""),
               person(given = "person)",
                      family = ")",
                      role = "aut",
                      comment = "\"ctb\""),
               person(given = c("Abdisalam", "Hassan"),
                      family = "Muse",
                      role = "cre",
                      email = "abdisalam.h.muse@gmail.com"))
as necessary.
checkRd: (-1) AEHMLE.Rd:42-45: Lost braces
    42 | \item{basehaz}{: {baseline hazard structure including baseline
       |                  ^
checkRd: (-1) AHMLE.Rd:41-43: Lost braces
    41 | \item{basehaz}{: {baseline hazard structure including baseline
       |                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  addNoiseAtEventTimes.Rd: data.table
  makeContWeights.Rd: data.table
  weightPredict.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
makeContWeights 20.396  1.411   9.772
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘akaike_adjusted_rsq.R’ ‘filter_vif.R’ ‘fit_models.R’
    ‘select_models.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AICc_permanova2.Rd: adonis2
  fit_models.Rd: vegdist, adonis2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Greg Gloor <ggloor@uwo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Greg",
                    family = "Gloor",
                    role = c("aut", "cre"),
                    email = "ggloor@uwo.ca")
as necessary.
Maintainer: ‘Andreas Pfeiffer <apfeiffer1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Pfeiffer",
                    role = c("aut", "cre"),
                    email = "apfeiffer1@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
DoOSA 4.417  0.192   5.366
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ability_agreement.R’ ‘ability_ai.R’ ‘ability_compute_bounds.R’
    ‘ability_compute_stats.R’ ‘ability_human.R’
    ‘ability_human_override.R’ ‘ability_preference.R’
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
TestMonotonicityRE 6.439  0.134   8.319
plot_preference    4.036  0.012   6.203
checkRd: (-1) aimPlot.Rd:39: Lost braces; missing escapes or markup?
    39 |  \item \code{Variable} {1st column: The various aims to be completed}
       |                        ^
checkRd: (-1) aimPlot.Rd:40: Lost braces; missing escapes or markup?
    40 |  \item \code{Percentage} {2nd column: The percentage of completeness}
       |                          ^
Author field differs from that derived from Authors@R
  Author:    ‘Nicolas Frerebeau [aut, cre] (<https://orcid.org/0000-0001-5759-4944>), Joe Roe [aut] (<https://orcid.org/0000-0002-1011-1244>), Brice Lebrun [art] (<https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (03pbgwk21), CNRS [fnd] (02feahw73)’
  Authors@R: ‘Nicolas Frerebeau [aut, cre] (ORCID: <https://orcid.org/0000-0001-5759-4944>), Joe Roe [aut] (ORCID: <https://orcid.org/0000-0002-1011-1244>), Brice Lebrun [art] (ORCID: <https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (ROR: <https://ror.org/03pbgwk21>), CNRS [fnd] (ROR: <https://ror.org/02feahw73>)’
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
RunModel_DA 4.446  0.098   5.596
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot.GRiwrm.R’
checkRd: (-1) get_airnow_area.Rd:25: Lost braces; missing escapes or markup?
    25 | \item{parameters}{Parameter(s) to return data for. Choices are PM_{2.5}
       |                                                                   ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gateway_keyring.R’ ‘gateway_openai.R’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘airship.R’
Maintainer: ‘Santos J. González-Rojí <santosjose.gonzalez@ehu.eus>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jon",
                      family = "Sáenz",
                      role = "aut"),
               person(given = c("Santos", "J."),
                      family = "González-Rojí",
                      role = c("aut", "cre"),
                      email = "santosjose.gonzalez@ehu.eus"),
               person(given = "Sheila",
                      family = "Carreno-Madinabeitia",
                      role = "aut"),
               person(given = "Gabriel",
                      family = "Ibarra-Berastegi",
                      role = "aut"))
as necessary.

File 'R/aiRthermo-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Found the following files/directories:
  ‘stuve.pdf’
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
effectiveness_poly    5.087  0.176   6.858
tracelines_poly       4.605  0.004   6.907
latent_trait_analysis 4.091  0.038   5.611
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
SAM         7.851  0.400  10.201
show.sam    7.286  0.280   8.896
modeled_dqt 7.149  0.407   8.401
modeled_isf 7.181  0.289   8.758
aniso_SAM   7.281  0.187   8.739
Maintainer: ‘W. E. Wansouwé <ericwansouwe@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("W.", "E."),
                      family = "Wansouwé",
                      role = c("aut", "cre"),
                      email = "ericwansouwe@gmail.com"),
               person(given = c("S.", "M."),
                      family = "Somé",
                      role = "aut"),
               person(given = c("C.", "C."),
                      family = "Kokonendji",
                      role = "aut"))
as necessary.

The URL field contains the following bad parts:
  www.r-project.org
The URL field should be a list of URLs separated by commas or
whitespace.
checkRd: (-1) plot.dke.fun.Rd:33: Lost braces; missing escapes or markup?
    33 |   \item{las}{ Numeric in {0,1,2,3}; the style of axis labels. 
       |                          ^
checkRd: (-1) interpp.Rd:119: Lost braces
   119 |   If \code{linear} is \\code{TRUE}, linear
       |                             ^
Maintainer: ‘Zichao Li <lizichao@live.unc.edu>’

The Description field contains
  and Li (2020) <arXiv:2009.04550>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ravi",
                    family = "Varadhan",
                    role = c("aut", "cre"),
                    email = "ravi.varadhan@jhu.edu",
                    comment = "with contributions from Gabor Grothendieck")
as necessary.
checkRd: (-1) buildPhylipLineage.Rd:61: Lost braces; missing escapes or markup?
    61 |                                      names with the format {"Inferred1", "Inferred2", ...}.
       |                                                            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gridPlot.Rd: ggplot
  plotAbundanceCurve.Rd: ggplot
  plotDiversityCurve.Rd: ggplot
  plotDiversityTest.Rd: ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
alphaDiversity 4.472  0.151   6.213
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘calc_plan_stats.R’
Maintainer: ‘Daewoo Pak <heavyrain.pak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chenxi",
                      family = "Li",
                      role = "aut"),
               person(given = "Daewoo",
                      family = "Pak",
                      role = c("aut", "cre"),
                      email = "heavyrain.pak@gmail.com"),
               person(given = "David",
                      family = "Todem",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
alacoxIC 0.858  0.072   6.986
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
feemcorcondia     4.658  0.024   5.545
albatross-package 4.360  0.104   5.307
Maintainer: ‘Kamil Erguler <k.erguler@cyi.ac.cy>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kamil",
                    family = "Erguler",
                    role = c("aut", "cre"),
                    email = "k.erguler@cyi.ac.cy")
as necessary.
Maintainer: ‘Luis Benites Sanchez <lbenitesanchez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luis", "Benites"),
                      family = "Sanchez",
                      role = c("aut", "cre"),
                      email = "lbenitesanchez@gmail.com"),
               person(given = c("Christian", "E."),
                      family = "Galarza",
                      role = "aut"),
               person(given = c("Victor", "H."),
                      family = "Lachos",
                      role = "aut"))
as necessary.
Maintainer: ‘Christian E. Galarza <cgalarza88@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Christian", "E."),
                      family = "Galarza",
                      role = c("aut", "cre"),
                      email = "cgalarza88@gmail.com"),
               person(given = c("Victor", "H."),
                      family = "Lachos",
                      role = "aut",
                      email = "hlachos@ime.unicamp.br"))
as necessary.
Maintainer: ‘Dan Apley <apley@northwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dan",
                    family = "Apley",
                    role = c("aut", "cre"),
                    email = "apley@northwestern.edu")
as necessary.

File 'R/ALEPlot-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
PDPlot 4.764  0.002   6.766
Maintainer: ‘George Rosenberger <gr2578@cumc.columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "George",
                      family = "Rosenberger",
                      role = c("aut", "cre"),
                      email = "gr2578@cumc.columbia.edu"),
               person(given = "Hannes",
                      family = "Roest",
                      role = "aut"),
               person(given = "Christina",
                      family = "Ludwig",
                      role = "aut"),
               person(given = "Ruedi",
                      family = "Aebersold",
                      role = "aut"),
               person(given = "Lars",
                      family = "Malmstroem",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
checkRd: (-1) ALF.Rd:47: Escaped LaTeX specials: \&
checkRd: (-1) APEXMS.Rd:14: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) APEXMS.Rd:15: Lost braces in \enumerate; meant \describe ?
Maintainer: ‘Roy Wetherall <rwetherall@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Roy",
                    family = "Wetherall",
                    role = c("aut", "cre"),
                    email = "rwetherall@gmail.com")
as necessary.
Maintainer: ‘Jan Wolfertz <Jan.wolfertz@uni-duesseldorf.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jan",
                    family = "Wolfertz",
                    role = c("aut", "cre"),
                    email = "jan.wolfertz@uni-duesseldorf.de")
as necessary.
checkRd: (-1) optimalfrequency.Rd:29: Escaped LaTeX specials: \$
checkRd: (-1) optimalfrequency.Rd:30: Escaped LaTeX specials: \$
checkRd: (-1) optimalfrequency.Rd:31: Escaped LaTeX specials: \$
Maintainer: ‘Robert Fulton <rfulton@algorithmia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Sutton",
                      role = "aut"),
               person(given = "James",
                      family = "Athappilly",
                      role = "aut"),
               person(given = "Taylor",
                      family = "Raack",
                      role = "aut"),
               person(given = "Robert",
                      family = "Fulton",
                      role = "cre",
                      email = "rfulton@algorithmia.com"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘lambda_functions.R’ ‘likelihood-space.R’ ‘snc.R’
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
Alignment 10.645  0.775  13.878
Maintainer: ‘Cedric Hagen <ch0934@princeton.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Cedric",
                    family = "Hagen",
                    role = c("aut", "cre"),
                    email = "ch0934@princeton.edu")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Nicolas Frerebeau [aut, cre] (<https://orcid.org/0000-0001-5759-4944>), Brice Lebrun [art] (<https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (03pbgwk21), CNRS [fnd] (02feahw73)’
  Authors@R: ‘Nicolas Frerebeau [aut, cre] (ORCID: <https://orcid.org/0000-0001-5759-4944>), Brice Lebrun [art] (ORCID: <https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (ROR: <https://ror.org/03pbgwk21>), CNRS [fnd] (ROR: <https://ror.org/02feahw73>)’
Maintainer: ‘Nathan Medina-Rodriguez <nathan.medina@ulpgc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nathan",
                      family = "Medina-Rodriguez",
                      role = c("aut", "cre"),
                      email = "nathan.medina@ulpgc.es"),
               person(given = "Angelo",
                      family = "Santana",
                      role = "aut"))
as necessary.
Maintainer: ‘Todd Cross <todd.cross@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paul",
                      family = "Galpern",
                      role = "aut",
                      email = "pgalpern@gmail.com"),
               person(given = "Todd",
                      family = "Cross",
                      role = "cre",
                      email = "todd.cross@gmail.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  amCluster.Rd: dynamicTreeCut, cutreeHybrid
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Emily Weiser <emily.l.weiser@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Emily", "L."),
                      family = "Weiser",
                      role = "aut"),
               person(given = "Emily",
                      family = "Weiser",
                      role = "cre",
                      email = "emily.l.weiser@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
shift.surf.ggplot 4.676  0.278   7.079
shift.moon.ggplot 3.870  0.243   5.113
shift.pie.ggplot  3.346  0.273   5.312
checkRd: (-1) allestimates.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) allestimates.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) allestimates.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) allestimates.Rd:28: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
all_plot      4.977  0.066   7.306
all_plot_aic  4.985  0.036   7.857
all_cox       4.854  0.053   6.907
all_plot_aic2 4.844  0.039   6.483
all_glm       3.907  0.039   5.387
all_plot2     3.172  0.035   5.453
Maintainer: ‘Dr. Sandip Garai <sandipnicksandy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dr.", "Sandip"),
                    family = "Garai",
                    role = c("aut", "cre"),
                    email = "sandipnicksandy@gmail.com")
as necessary.
checkRd: (-1) compare_cohorts.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) compare_cohorts.Rd:36: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Ville-Petteri Makinen <vpmakine@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ville-Petteri",
                    family = "Makinen",
                    role = c("aut", "cre"),
                    email = "vpmakine@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
ALLSPICE_simulation       4.747  0.056   6.227
get_c_hat                 4.609  0.039   5.890
get_pheno_pair            4.596  0.016   5.843
get_beta_hat              4.538  0.067   6.078
get_likelihood_test_stats 4.583  0.017   6.370
get_mle_beta              4.285  0.042   6.081
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘episodes.Rd’ ‘loadouts.Rd’ ‘seasons.Rd’ ‘survivalists.Rd’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cleanse.data.frame.Rd: tbl_df
  split_by.data.frame.Rd: tbl_df
  treatment_corr.Rd: tbl_df
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Amrei Stammann <amrei.stammann@rub.de>’

The Description field contains
  described in Stammann (2018) <arXiv:1707.01815> and is restricted to
  and Wanner (2020) <arXiv:2004.12655>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Edward Lee <email.edwardlee@gmail.com>’

The BugReports field in DESCRIPTION has
  http://github.com/edwardslee/alphabetr
which should likely be
  http://github.com/edwardslee/alphabetr/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘inference.R’ ‘transformers.R’ ‘variance.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  alphaci.Rd: future.apply
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Beatriz Pateiro-Lopez <beatriz.pateiro@usc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Beatriz",
                      family = "Pateiro-Lopez",
                      role = c("aut", "cre"),
                      email = "beatriz.pateiro@usc.es"),
               person(given = "Alberto",
                      family = "Rodriguez-Casal"),
               person(family = ".",
                      role = "aut"))
as necessary.
Maintainer: ‘Jesper Wulff <jwulff@econ.au.dk>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Andre Rehage <rehage@statistik.tu-dortmund.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Andre",
                      family = "Rehage",
                      role = c("aut", "cre"),
                      email = "rehage@statistik.tu-dortmund.de"),
               person(given = "Sonja",
                      family = "Kuhnt",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘alphaOutlier-package.Rd’:
    \keyword{package
      distribution
      robust}
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
aout.kernel 8.607  0.046  11.469
Maintainer: ‘Beatriz Pateiro-Lopez <beatriz.pateiro@usc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thomas",
                      family = "Lafarge",
                      role = "aut"),
               person(given = "Beatriz",
                      family = "Pateiro-Lopez",
                      role = c("aut", "cre"),
                      email = "beatriz.pateiro@usc.es"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.ashape3d.Rd: rgl, material3d
  surfaceNormals.Rd: material3d
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mahdi Teimouri <teimouri@aut.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mahdi",
                      family = "Teimouri",
                      role = c("aut", "cre"),
                      email = "teimouri@aut.ac.ir"),
               person(given = "Adel",
                      family = "Mohammadpour",
                      role = "aut"),
               person(given = "Saralees",
                      family = "Nadarajah",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Sanford Weisberg <sandy@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sanford",
                    family = "Weisberg",
                    role = c("aut", "cre"),
                    email = "sandy@umn.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid file URI:
  URI: www.oecd.org
    From: man/UN11.Rd
checkRd: (-1) UN1.Rd:16: Escaped LaTeX specials: \$
checkRd: (-1) rateprof.Rd:64: Escaped LaTeX specials: \&
Maintainer: ‘Dariush Najarzadeh <D_Najarzadeh@sbu.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dariush",
                    family = "Najarzadeh",
                    role = c("aut", "cre"),
                    email = "d_najarzadeh@sbu.ac.ir")
as necessary.
Malformed Title field: should not end in a period.
Maintainer: ‘Katharine Mullen <mullenkate@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Katharine", "M."),
                      family = "Mullen",
                      role = "aut"),
               person(given = "Katharine",
                      family = "Mullen",
                      role = "cre",
                      email = "mullenkate@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
metapb   11.176  0.003  13.714
meta.pen 10.585  0.016  12.860
checkRd: (-1) altopt.ic.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.ic.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) altopt.rc.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘calculate_covariates.R’
checkRd: (-1) convertCoord.Rd:32: Lost braces
    32 | Please check here{https://lbs.amap.com/faq/account/key/72}}
       |                  ^
checkRd: (-1) convertCoord.individual.Rd:33: Lost braces
    33 | Please check here{https://lbs.amap.com/faq/account/key/72}}
       |                  ^
checkRd: (-1) getCoord.Rd:39: Lost braces
    39 | Please check here{https://lbs.amap.com/faq/account/key/72}}
       |                  ^
checkRd: (-1) getCoord.individual.Rd:39: Lost braces
    39 | here{https://lbs.amap.com/faq/account/key/72}}
       |     ^
checkRd: (-1) getLocation.Rd:60: Lost braces; missing escapes or markup?
    60 | {https://lbs.amap.com/faq/account/key/72}}
       | ^
checkRd: (-1) getLocation.individual.Rd:60: Lost braces
    60 | Please check here{https://lbs.amap.com/faq/account/key/72}}
       |                  ^
'::' or ':::' import not declared from: ‘bslib’
'library' or 'require' call not declared from: ‘shinyjs’
Specified C++11: please drop specification unless essential
Maintainer: ‘Nils Myszkowski <nmyszkowski@pace.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nils",
                    family = "Myszkowski",
                    role = c("aut", "cre"),
                    email = "nmyszkowski@pace.edu")
as necessary.
Maintainer: ‘Housen Chu <hchu@lbl.gov>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Conversion of ‘README.md’ failed:
Error parsing YAML metadata at "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/amerika/README.md" (line 1, column 1):
YAML parse exception at line 3, column 0,
while scanning a simple key:
could not find expected ‘:’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘deltaFibonacciCompress.Rd’ ‘read.AmigaBitmapFont.Rd’
    ‘read.AmigaBitmapFontSet.Rd’ ‘write.AmigaBitmapFont.Rd’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
rasterToIFF    10.806  0.047  13.003
IFFChunk        8.188  0.149  10.272
rasterToBitmap  4.918  0.040   6.012
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
amis 5.742  0.118   7.245
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
ammiBayes.conf.plot 11.896  0.453  14.271
Author field differs from that derived from Authors@R
  Author:    ‘B. C. Ajay [aut, cre] (<https://orcid.org/0000-0001-7222-8483>), J. Aravind [aut] (<https://orcid.org/0000-0002-4791-442X>), R. Abdul Fiyaz [aut] (<https://orcid.org/0000-0001-6261-7071>), ICAR [cph] (https://www.icar.org.in)’
  Authors@R: ‘B. C. Ajay [aut, cre] (ORCID: <https://orcid.org/0000-0001-7222-8483>), J. Aravind [aut] (ORCID: <https://orcid.org/0000-0002-4791-442X>), R. Abdul Fiyaz [aut] (ORCID: <https://orcid.org/0000-0001-6261-7071>), ICAR [cph] (url: https://www.icar.org.in)’
Maintainer: ‘Jon Katz <jonkatz4@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jon",
                      family = "Katz",
                      role = c("aut", "cre"),
                      email = "jonkatz4@gmail.com"),
               person(given = "Therese",
                      family = "Donovan",
                      role = "aut",
                      email = "tdonovan@uvm.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘simCovariate.Rd’:
    \keyword{datagen,}
Maintainer: ‘Felipe Tumenas Marques <tumenas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Monica",
                      family = "Serra",
                      role = "aut",
                      email = "monicaserra.bio04@gmail.com"),
               person(given = c("Felipe", "Tumenas"),
                      family = "Marques",
                      role = c("aut", "cre"),
                      email = "tumenas@gmail.com"))
as necessary.
checkRd: (-1) aMNLFA.prune.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aMNLFA.prune.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Oliver Sieber <oliver.sieber@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Felix",
                      family = "Scholkmann",
                      role = "aut",
                      email = "felix.scholkmann@gmail.com"),
               person(given = "Oliver",
                      family = "Sieber",
                      role = "cre",
                      email = "oliver.sieber@gmail.com"))
as necessary.
checkRd: (-1) AmpliconDuo-package.Rd:37-39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:40-42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:43-46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:47-49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:50-52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:53-55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) AmpliconDuo-package.Rd:56-58: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
ampliconduo   5.297  0.084   5.998
plotORdensity 4.111  0.087   5.532
Maintainer: ‘Adam Elder <shmelder@gmail.com>’

The Description field contains
  A testing framework described in Elder et al. (2022) <arXiv:2203.01897>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  amExample1.Rd: allelematch
  amExample2.Rd: allelematch
  amExample3.Rd: allelematch
  amExample4.Rd: allelematch
  amExample5.Rd: allelematch
  amregtest.Rd: allelematch
  artData.Rd: amDataset, allelematch
  artRun.Rd: allelematch
  artVersion.Rd: allelematch-package
  ggSample.Rd: allelematch
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
mo_property 4.931      0   6.532
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
extract_covariates 6.502  0.165   8.784
Maintainer: ‘Michal Burdukiewicz <michalburdukiewicz@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘AmyloGram-package.Rd’:
    https://doi.org/10.1038/s41598-017-13210-9
Maintainer: ‘Cedric Landerer <cedric.landerer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Authors@R",
                      role = "aut"),
               person(given = "Cedric",
                      family = "Landerer",
                      role = "cre",
                      email = "cedric.landerer@gmail.com"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Patrick Mair <mair@fas.harvard.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
plottr            5.516  0.054   6.554
plot.analyzerPlot 4.525  0.032   5.766
Author field differs from that derived from Authors@R
  Author:    ‘Nicolas Frerebeau [aut, cre] (<https://orcid.org/0000-0001-5759-4944>), Université Bordeaux Montaigne [fnd] (03pbgwk21), CNRS [fnd] (02feahw73)’
  Authors@R: ‘Nicolas Frerebeau [aut, cre] (ORCID: <https://orcid.org/0000-0001-5759-4944>), Université Bordeaux Montaigne [fnd] (ROR: <https://ror.org/03pbgwk21>), CNRS [fnd] (ROR: <https://ror.org/02feahw73>)’
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
DEGS_scANANSE 7.426  0.331   8.982
Maintainer: ‘Eoghan T O'Halloran <eoghan.ohalloran2@mail.dcu.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Tiago", "R"),
                      family = "Magalhaes",
                      role = "aut"),
               person(given = c("Eoghan", "T"),
                      family = "O'Halloran",
                      role = c("aut", "cre"),
                      email = "eoghan.ohalloran2@mail.dcu.ie"))
as necessary.
checkRd: (-1) AncestryMapper2.0-package.Rd:33: Escaped LaTeX specials: \~
checkRd: (-1) AncestryMapper2.0-package.Rd:38: Escaped LaTeX specials: \~
Maintainer: ‘Simon Zimmermann <zimmersi@hu-berlin.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Zimmermann",
                    role = c("aut", "cre"),
                    email = "zimmersi@hu-berlin.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
anchor_prediction_gam 7.875  0.205  10.594
anchor_regression_gam 7.404  0.115  10.627
Maintainer: ‘Josh Pasek <josh@joshpasek.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Josh",
                    family = "Pasek",
                    role = c("aut", "cre"),
                    email = "josh@joshpasek.com")
as necessary.
Maintainer: ‘Michael D. Sumner <mdsumner@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Maintainer: ‘Damien R. Farine <damien.farine@ieu.uzh.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Damien", "R."),
                      family = "Farine",
                      role = c("aut", "cre"),
                      email = "damien.farine@ieu.uzh.ch"),
               person(given = "Alfredo",
                      family = "Sanchez-Tojar",
                      role = "aut"))
as necessary.
Maintainer: ‘Samuel Ackerman <smackrmn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Samuel",
                    family = "Ackerman",
                    role = c("aut", "cre"),
                    email = "smackrmn@gmail.com")
as necessary.
checkRd: (-1) EKF_1d_interp_joint.Rd:55: Lost braces; missing escapes or markup?
    55 | Prior 1x1 covariance matrix for predicting x_t from x_{t-1}.
       |                                                       ^
checkRd: (-1) EKF_interp_joint.Rd:65: Lost braces; missing escapes or markup?
    65 | Prior 2x2 covariance matrix for predicting x_t from x_{t-1}.
       |                                                       ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  make_segments.Rd: ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Problems with news in ‘NEWS.md’:
No news entries found.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘app.R’
checkRd: (-1) animate.Rd:625-627: Lost braces
   625 | group = function(...) {
       |                       ^
Maintainer: ‘Yihui Xie <xie@yihui.name>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
'library' or 'require' calls not declared from:
  ‘Cairo’ ‘fImport’ ‘rgl’ ‘zoo’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘anim-animate.R’ ‘anim-prep-cat.R’ ‘anim-prep.R’ ‘funnel-web-data.R’
    ‘kangaroo-data.R’ ‘kangaroo-plot.R’ ‘proportional-shade.R’
    ‘wallaby-data.R’ ‘wallaby-plot.R’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
funnel_web_plot 5.366   0.06   7.067
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
facet_grid 4.152  0.000   5.174
coord_map  3.614  0.032   5.089
Maintainer: ‘Bart Lammers <bart.f.lammers@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bart",
                    family = "Lammers",
                    role = c("aut", "cre"),
                    email = "bart.f.lammers@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Author field differs from that derived from Authors@R
  Author:    ‘Philipp Angerer [ccp] (<https://orcid.org/0000-0002-0369-2888>, flying-sheep), Alex Wolf [ccp] (<https://orcid.org/0000-0002-8760-7838>, falexwolf), Isaac Virshup [ccp] (ivirshup), Sergei Rybakov [ccp] (Koncopd), Robrecht Cannoodt [aut, cre, cph] (<https://orcid.org/0000-0003-3641-729X>, rcannood)’
  Authors@R: ‘Philipp Angerer [ccp] (ORCID: <https://orcid.org/0000-0002-0369-2888>, github: flying-sheep), Alex Wolf [ccp] (ORCID: <https://orcid.org/0000-0002-8760-7838>, github: falexwolf), Isaac Virshup [ccp] (github: ivirshup), Sergei Rybakov [ccp] (github: Koncopd), Robrecht Cannoodt [aut, cre, cph] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood)’
checkRd: (-1) concat.Rd:35: Lost braces; missing escapes or markup?
    35 | \item{index_unique}{Whether to make the index unique by using the keys. If provided, this is the delimeter between "{orig_idx}{index_unique}{key}". When \code{NULL}, the original indices are kept.}
       |                                                                                                                     ^
checkRd: (-1) concat.Rd:35: Lost braces
    35 | \item{index_unique}{Whether to make the index unique by using the keys. If provided, this is the delimeter between "{orig_idx}{index_unique}{key}". When \code{NULL}, the original indices are kept.}
       |                                                                                                                               ^
checkRd: (-1) concat.Rd:35: Lost braces
    35 | \item{index_unique}{Whether to make the index unique by using the keys. If provided, this is the delimeter between "{orig_idx}{index_unique}{key}". When \code{NULL}, the original indices are kept.}
       |                                                                                                                                             ^
Maintainer: ‘Samuel R. Borstein <sam@borstein.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Samuel", "R."),
                      family = "Borstein",
                      role = c("aut", "cre"),
                      email = "sam@borstein.com"),
               person(given = "Brian",
                      family = "O'Meara",
                      role = "aut",
                      email = "bomeara@utk.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘utils.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  annotate.Rd: htmlwidgets
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Fabrizio Maturo <f.maturo@unich.it>’

The BugReports field in DESCRIPTION has
  https://github.com/fabriziomaturo/AnnuityRIR
which should likely be
  https://github.com/fabriziomaturo/AnnuityRIR/issues
instead.
checkRd: (-1) PV_post_triang_3.Rd:7: Escaped LaTeX specials: \_ \_
checkRd: (-1) PV_post_triang_3.Rd:22: Escaped LaTeX specials: \_ \_
checkRd: (-1) PV_pre_triang_3.Rd:7: Escaped LaTeX specials: \_ \_
checkRd: (-1) PV_pre_triang_3.Rd:22: Escaped LaTeX specials: \_ \_
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
plot_PVs_pre 4.11  0.059    5.73
Maintainer: ‘Maciel C. Vidal <calebe@ime.usp.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Maciel", "C."),
                      family = "Vidal",
                      role = c("aut", "cre"),
                      email = "calebe@ime.usp.br"),
               person(given = "Andre",
                      family = "Fujita",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
anomaly-package 6.780  0.199   7.850
capa            4.071  0.126   6.143
bard            4.041  0.048   5.562
sampler         3.961  0.000   5.416
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
distance_matrix_PDC 4.976  0.037   6.645
Maintainer: ‘Philip Pallmann <p.pallmann@lancaster.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Philip",
                    family = "Pallmann",
                    role = c("aut", "cre"),
                    email = "p.pallmann@lancaster.ac.uk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ANOPA-anopa.R’ ‘ANOPA-contrastProportions.R’ ‘ANOPA-convert.R’
    ‘ANOPA-random.R’
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
anopa_asn_trans1  5.539  0.029   7.109
ArringtonEtAl2002 3.894  0.193   5.555
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Philip Agnew <philip.agnew@ird.fr>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘anovir-package.Rd’:
    https://doi.org/10.1101/530709
  File ‘data_blanford.Rd’:
    https://doi.org/10.1186/1475-2875-11-365
  File ‘data_lorenz.Rd’:
    https://doi.org/10.1101/530709
    https://doi.org/10.1111/j.1752-4571.2011.00199.x
    https://doi.org/10.5061/dryad.2s231
  File ‘data_parker.Rd’:
    https://doi.org/10.1111/evo.12418
    https://doi.org/10.5061/dryad.24gq7
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
sim_data_nll_basic 4.205  0.015   5.895
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
lilliefors 6.687  0.041    8.62
Maintainer: ‘Javad Zahiri <zahiri@modares.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Babak",
                      family = "Khorsand",
                      role = "aut",
                      email = "khorsand@yahoo.com"),
               person(given = "Javad",
                      family = "Zahiri",
                      role = "cre",
                      email = "zahiri@modares.ac.ir"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
AntAngioCOOL 6.991  0.653   8.087
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
anthroplus_prevalence 4.381  0.007   6.457
Maintainer: ‘Guillermo Vinue <Guillermo.Vinue@uv.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guillermo",
                      family = "Vinue",
                      role = c("aut", "cre"),
                      email = "guillermo.vinue@uv.es"),
               person(given = "Irene",
                      family = "Epifanio",
                      role = "aut"),
               person(given = "Amelia",
                      family = "Simo",
                      role = "aut"),
               person(given = c("M.", "Victoria"),
                      family = "Ibanez",
                      role = "aut"),
               person(given = "Juan",
                      family = "Domingo",
                      role = "aut"),
               person(given = "Guillermo",
                      family = "Ayala",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  HartiganShapes.Rd: procGPA
  LloydShapes.Rd: procGPA
  archetypesBoundary.Rd: stepArchetypes, archetypes
  archetypoids.Rd: archetypes, stepArchetypes
  shapes3dShapes.Rd: shapes3d
  stepArchetypesRawData.Rd: stepArchetypes, archetypes
  stepArchetypoids.Rd: stepArchetypes, archetypes
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Af_edge_RMSD.R’ ‘VDJ_3d_properties.R’
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plotAllABT 6.512  0.067   8.689
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
bicriterion_anticlustering 4.763  0.006   5.614
checkRd: (-1) PS-methods.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) PS-methods.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) PS-methods.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) PS-methods.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) PS-methods.Rd:65-67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) Sim-Functions.Rd:126: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sim-Functions.Rd:127-129: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sim-Functions.Rd:135: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sim-Functions.Rd:136-137: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sim-Functions.Rd:138-140: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sim-Functions.Rd:141-143: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Bruno Bodin <bruno.bodin@yale-nus.edu.sg>’

The Description field contains
  by Argiento and De Iorio (2019) <arXiv:1904.09733> and offers a more
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
AM_find_gamma_Pois 5.791  0.054   7.149
Maintainer: ‘Lorenzo Meninato <lorenzomeninato@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lorenzo",
                    family = "Meninato",
                    role = c("aut", "cre"),
                    email = "lorenzomeninato@gmail.com")
as necessary.
Maintainer: ‘Renaud Lancelot <renaud.lancelot@cirad.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Matthieu",
                      family = "Lesnoff",
                      role = "aut",
                      email = "matthieu.lesnoff@cirad.fr"),
               person(given = "Renaud",
                      family = "Lancelot",
                      role = c("aut", "cre"),
                      email = "renaud.lancelot@cirad.fr"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jerry Ratcliffe <jhr@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jerry",
                    family = "Ratcliffe",
                    role = c("aut", "cre"),
                    email = "jhr@temple.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
aoristic.graph 4.065  0.104   5.263
aoristic.df    3.764  0.047   5.337
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stéphane",
                    family = "Laurent",
                    role = c("aut", "cre"),
                    email = "laurent_step@outlook.fr")
as necessary.
Maintainer: ‘Diogo Silveira Mendonca <diogosmendonca@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Diogo", "Silveira"),
                    family = "Mendonca",
                    role = c("aut", "cre"),
                    email = "diogosmendonca@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
read.apache.access.log 0.154   0.01   6.599
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
APOTCPlot          7.546  0.475   9.709
showCloneHighlight 5.808  0.034   7.229
AdjustAPOTC        5.239  0.252   7.309
vizAPOTC           4.528  0.025   5.851
overlayLegend      4.379  0.115   5.866
Maintainer: ‘Arden Miller <a.miller@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arden",
                      family = "Miller",
                      role = c("aut", "cre"),
                      email = "a.miller@auckland.ac.nz"),
               person(given = c("Abu", "Zar", "Md."),
                      family = "Shafiullah.",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
IERpenalties        10.896  0.000  14.306
apc                  8.224  0.008  10.298
summary.apc          7.900  0.004   9.073
FDRpenalties         7.839  0.000   9.402
plot.apc             7.751  0.000   9.842
EERpenalties         6.307  0.000   7.716
APCanalysis-package  5.134  0.025   6.099
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
apci 6.922  0.333   9.471
Maintainer: ‘Ulrich Bodenhofer <ulrich@bodenhofer.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ulrich",
                      family = "Bodenhofer",
                      role = c("aut", "cre"),
                      email = "ulrich@bodenhofer.com"),
               person(given = "Johannes",
                      family = "Palme",
                      role = "ctb"),
               person(given = "Chrats",
                      family = "Melkonian",
                      role = "ctb"),
               person(given = "Andreas",
                      family = "Kothmeier",
                      role = "aut"),
               person(given = "Nikola",
                      family = "Kostic",
                      role = "ctb"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  apcluster-methods.Rd: dgTMatrix-class, Matrix-class
  conversions.Rd: dgTMatrix-class, sparseMatrix-class, Matrix-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Yushu Shi <shiyushu2006@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yushu",
                    family = "Shi",
                    role = c("aut", "cre"),
                    email = "shiyushu2006@gmail.com")
as necessary.
checkRd: (-1) apc.indiv.est.model.Rd:142: Lost braces
   142 | For model testing: \code{\link{apc.indiv.model.table}}, code{\link{apc.indiv.compare.direct}}, \code{\link{waldtest}}, \code{\link{linearHypothesis}}
       |                                                             ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  apc.indiv.compare.direct.Rd: plm
  apc.indiv.est.model.Rd: plm, svyglm, waldtest, linearHypothesis
  apc.indiv.model.table.Rd: plm, waldtest, linearHypothesis
  apc.plot.data.level.Rd: levelplot, lattice
  apc.plot.fit.residuals.Rd: levelplot, lattice
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
plot_jointMarginalAPCeffects 4.657  0.088   6.468
plot_APCheatmap              4.369  0.037   6.152
Maintainer: ‘Aurelien Chateigner <aurelien.chateigner@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aurelien",
                    family = "Chateigner",
                    role = c("aut", "cre"),
                    email = "aurelien.chateigner@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  multidna2alignment.Rd: as.alignment
  multidna2genind.Rd: genind-class, DNAbin2genind
  multidna2multiphyDat.Rd: DNAbin2genind
  plot-multidna-method.Rd: image.DNAbin
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Shaun Wilkinson <shaunpwilkinson@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plot.PHMM  6.396  0.000   9.494
derivePHMM 6.261  0.032   9.352
possible bashism in configure.ac line 32 (should be 'b = a'):
  if test x"${RSysinfoName}" == x"Darwin"; then
  possible bashism in configure.ac line 43 (should be 'b = a'):
     if test x"${hasOpenMP}" == x""; then
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
accuracy_sifter  9.063  0.360  11.226
auc              8.109  0.066  11.102
aphylo_estimates 8.117  0.055   9.922
Maintainer: ‘Joshua P. French <joshua.french@ucdenver.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Joshua", "P."),
                    family = "French",
                    role = c("aut", "cre"),
                    email = "joshua.french@ucdenver.edu")
as necessary.
checkRd: (-1) predict_adjust.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) predict_adjust.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) predict_adjust.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) predict_adjust.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) print.predict_adjust.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) print.predict_adjust.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) print.predict_adjust.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) print.predict_adjust.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
APIS_2n 1.574  0.057  17.782
APIS_3n 1.197  0.035  16.042
Maintainer: ‘Hans Peter Wolf <pwolf@wiwi.uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hans", "Peter"),
                    family = "Wolf",
                    role = c("aut", "cre"),
                    email = "pwolf@wiwi.uni-bielefeld.de")
as necessary.
checkRd: (-1) iconplot.Rd:172: Lost braces
   172 |     the height of the area containing the panels and a margin of size code{100 * 0.1} 
       |                                                                           ^
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
puticon 4.191  0.394   5.165
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
apm_pre 3.735  0.073   5.221
Maintainer: ‘Quinten Stokkink <q.a.stokkink@tudelft.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Quinten",
                    family = "Stokkink",
                    role = c("aut", "cre"),
                    email = "q.a.stokkink@tudelft.nl")
as necessary.
Found the following calls to attach():
File ‘apollo/R/apollo_attach.R’:
  attach(as.list(apollo_beta), warn.conflicts = FALSE)
  attach(database, warn.conflicts = FALSE)
  attach(draws, warn.conflicts = FALSE)
  attach(randcoeff, warn.conflicts = FALSE)
  attach(lcpars, warn.conflicts = FALSE)
See section ‘Good practice’ in ‘?attach’.
Maintainer: ‘Eisuke Inoue <eisuke.inoue@marianna-u.ac.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eisuke",
                      family = "Inoue",
                      role = c("aut", "cre"),
                      email = "eisuke.inoue@marianna-u.ac.jp"),
               person(given = "Hajime",
                      family = "Uno",
                      role = "aut"))
as necessary.
Maintainer: ‘Max Kuhn <mxkuhn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Max",
                      family = "Kuhn",
                      role = c("aut", "cre"),
                      email = "mxkuhn@gmail.com"),
               person(given = "Kjell",
                      family = "Johnson",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
create.pgs.rank.plot 5.624  0.301   7.131
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Robin", "K.", "S."),
                    family = "Hankin",
                    role = c("aut", "cre"),
                    email = "hankin.robin@gmail.com")
as necessary.
Maintainer: ‘Bikram Karmakar <bkarmakar@ufl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bikram",
                    family = "Karmakar",
                    role = c("aut", "cre"),
                    email = "bkarmakar@ufl.edu")
as necessary.
Maintainer: ‘Marco D. Visser <marco.d.visser@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Marco", "D."),
                    family = "Visser",
                    role = c("aut", "cre"),
                    email = "marco.d.visser@gmail.com")
as necessary.
Maintainer: ‘Hengrui Cai <hengruicai@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hengrui",
                      family = "Cai",
                      role = c("aut", "cre"),
                      email = "hengruicai@gmail.com"),
               person(given = "Yan",
                      family = "Yuan",
                      role = "aut",
                      email = "yyuan@ualberta.ca"),
               person(given = c("Qian", "Michelle"),
                      family = "Zhou",
                      role = "aut",
                      email = "qz70@msstate.edu"),
               person(given = "Bingying",
                      family = "Li",
                      role = "aut",
                      email = "dorisli1120@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
APSurv 4.461  0.123    5.44
Found the following files/directories:
  ‘APBinary_PPV.csv’ ‘APBinary_TPF.csv’
  ‘APBinary_ap_summary(method=perturbation,B=1500).csv’
  ‘APBinary_auc_summary(method=perturbation,B=1500).csv’
  ‘APSurv_PPV.csv’ ‘APSurv_TPF.csv’
  ‘APSurv_ap_summary(method=bootstrap,B=500).csv’
  ‘APSurv_auc_summary(method=bootstrap,B=500).csv’
  ‘CompareAP_Binary_dap_summary(method=none).csv’
  ‘CompareAP_Survival_dap_summary(method=bootstrap,B=500).csv’
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
age_pyramid 7.491  0.184   9.714
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
isolate.signal 6.166  0.267   8.475
Maintainer: ‘John Lawson <lawsonjsl7net@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "John",
                    family = "Lawson",
                    role = c("aut", "cre"),
                    email = "lawsonjsl7net@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                        user system elapsed
glomApply                              7.264  0.274   6.372
simulateColor                          6.779  0.268   3.550
harmonize-SoilProfileCollection-method 5.747  0.022   5.993
plotMultipleSPC                        5.673  0.046   6.406
sp2                                    5.341  0.084   4.495
Examples with CPU time > 2.5 times elapsed time
               user system elapsed ratio
contrastChart 2.994  0.134   1.249 2.504
Maintainer: ‘Karline Soetaert <Karline.Soetaert@nioz.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Andreas", "F."),
                      family = "Hofmann",
                      role = "aut"),
               person(given = "Karline",
                      family = "Soetaert",
                      role = c("aut", "cre"),
                      email = "karline.soetaert@nioz.nl"),
               person(given = c("Filip", "J.R."),
                      family = "Meysman",
                      role = "aut"),
               person(given = "Mathilde",
                      family = "Hagens",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
Estimate_Age_Maturity 3.783  0.102   5.275
Maintainer: ‘Rich Nielsen <rnielsen@mit.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rich",
                    family = "Nielsen",
                    role = c("aut", "cre"),
                    email = "rnielsen@mit.edu")
as necessary.
checkRd: (-1) getages.Rd:11: Lost braces; missing escapes or markup?
    11 | containing the amalgamated $^{40}$Ar$^*$/$^{39}$Ar$_K$-ratios and
       |                              ^
checkRd: (-1) getages.Rd:11: Lost braces; missing escapes or markup?
    11 | containing the amalgamated $^{40}$Ar$^*$/$^{39}$Ar$_K$-ratios and
       |                                            ^
Maintainer: ‘Fernanda L. Schumacher <fernandalschumacher@gmail.com>’

The Description field contains
  innovations. arXiv preprint <arXiv:2110.00224>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.InfDiag.Rd: ggplot
  plot.Rd: ggplot
  plot.residARpCRM.Rd: ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ActivityEvents-class.Rd: TimeSeries-class
  ArchaeoPhases-package.Rd: TimeScale-class
  CumulativeEvents-class.Rd: TimeSeries-class
  activity.Rd: TimeScale-class
  as_events.Rd: TimeScale-class
  as_phases.Rd: TimeScale-class
  bury.Rd: TimeScale-class
  data.frame.Rd: TimeScale-class
  interval_credible.Rd: TimeScale-class
  interval_hdr.Rd: TimeScale-class
  occurrence.Rd: TimeScale-class
  plot_events.Rd: TimeScale-class
  plot_phases.Rd: TimeScale-class
  read_bcal.Rd: TimeScale-class
  read_chronomodel.Rd: TimeScale-class
  read_oxcal.Rd: TimeScale-class
  summary.Rd: TimeScale-class
  tempo.Rd: TimeScale-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
activity 4.298  0.329   5.542
Maintainer: ‘David L. Carlson <dcarlson@tamu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "L."),
                      family = "Carlson",
                      role = c("aut", "cre"),
                      email = "dcarlson@tamu.edu"),
               person(given = "Georg",
                      family = "Roth",
                      role = "ctb"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
Arnhofen 4.893  0.206   6.274
Unknown package ‘cxhull’ in Rd xrefs
Maintainer: ‘Michael Korvink <mkorvink@protonmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Manuel J. A. Eugster <manuel@mjae.net>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  as.archetypes.Rd: parameters
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
simplexplot 5.149  0.092   6.785
'library' or 'require' call not declared from: ‘mvtnorm’
Maintainer: ‘Benjamin M Delory <Benjamin.Delory@leuphana.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Benjamin", "M"),
                      family = "Delory",
                      role = c("aut", "cre"),
                      email = "benjamin.delory@leuphana.de"),
               person(given = "Caroline",
                      family = "Baudson",
                      role = "aut"),
               person(given = "Yves",
                      family = "Brostaux",
                      role = "aut"),
               person(given = "Guillaume",
                      family = "Lobet",
                      role = "aut"),
               person(given = c("Patrick", "du"),
                      family = "Jardin",
                      role = "aut"),
               person(given = "Loic",
                      family = "Pages",
                      role = "aut"),
               person(given = "Pierre",
                      family = "Delaplace",
                      role = "aut"))
as necessary.
Maintainer: ‘Marcin Kosinski <m.p.kosinski@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: OAuth application on GitHub
    From: man/archivist-github-integration.Rd
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  addHooksToPrintGitHub.Rd: Repository, archivist-package, alink,
    addHooksToPrint
  archive.Rd: Repository, saveToLocalRepo, md5hash, alink, aoptions
  archivist-github-integration.Rd: Repository
  createGitHubRepo.Rd: createLocalRepo, Repository, oauth2.0_token,
    Tags
  deleteGitHubRepo.Rd: Repository, oauth2.0_token
  pushGitHubRepo.Rd: Repository
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
ahistory 4.09   0.48   6.785
'library' or 'require' call not declared from: ‘gridExtra’
Maintainer: ‘Pulong Ma <mpulong@gmail.com>’

The Description field contains
  Andrew T Cox (2019) <arXiv:1909.01836>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) estimate_t0.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) estimate_t0.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) estimate_t0.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fitArCo.Rd:73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fitArCo.Rd:74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fitArCo.Rd:75: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Marta Karas <marta.karass@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Susana Barbosa <sabarbosa@fc.ul.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Susana",
                    family = "Barbosa",
                    role = c("aut", "cre"),
                    email = "sabarbosa@fc.ul.pt")
as necessary.
checkRd: (-1) recm.Rd:55: Lost braces; missing escapes or markup?
    55 | {In all cases,} \eqn{x_{j,t-1}} {in} \eqn{ECT} {is replaced by} \eqn{x_{j,t} \;\;\;\;\; \forall \;\; q_{j} = 0}
       | ^
checkRd: (-1) recm.Rd:55: Lost braces; missing escapes or markup?
    55 | {In all cases,} \eqn{x_{j,t-1}} {in} \eqn{ECT} {is replaced by} \eqn{x_{j,t} \;\;\;\;\; \forall \;\; q_{j} = 0}
       |                                 ^
checkRd: (-1) recm.Rd:55: Lost braces; missing escapes or markup?
    55 | {In all cases,} \eqn{x_{j,t-1}} {in} \eqn{ECT} {is replaced by} \eqn{x_{j,t} \;\;\;\;\; \forall \;\; q_{j} = 0}
       |                                                ^
checkRd: (-1) uecm.Rd:76: Lost braces; missing escapes or markup?
    76 |   {In addition,} \eqn{x_{j,t-1}} {and} \eqn{\Delta x_{j,t}} {cancel out
       |   ^
checkRd: (-1) uecm.Rd:76: Lost braces; missing escapes or markup?
    76 |   {In addition,} \eqn{x_{j,t-1}} {and} \eqn{\Delta x_{j,t}} {cancel out
       |                                  ^
checkRd: (-1) uecm.Rd:76-77: Lost braces
    76 |   {In addition,} \eqn{x_{j,t-1}} {and} \eqn{\Delta x_{j,t}} {cancel out
       |                                                             ^
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
coint_eq   4.147  0.223   5.081
plot_delay 3.884  0.047   5.400
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘adb_archive.R’ ‘adb_backup.R’ ‘adb_querry.R’ ‘helpers.R’
    ‘normGeometry.R’
Maintainer: ‘Christopher Prener <chris.prener@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
create_arena       6.024  0.181   8.363
print.arena_static 4.806  0.075   6.468
Maintainer: ‘JQ Veenstra <jqveenstra@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "JQ",
                      family = "Veenstra",
                      role = c("aut", "cre"),
                      email = "jqveenstra@gmail.com",
                      comment = "Justin"),
               person(given = "A.I.",
                      family = "McLeod",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  arfima.Rd: TrenchMean
  logLik.arfima.Rd: ltsa
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
tacfplot 1.185  0.017   8.826
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
darf   5.460  0.246   3.084
impute 5.323  0.315   2.738
earf   5.149  0.251   3.520
rarf   5.097  0.239   2.606
Maintainer: ‘Shihao Yang <shihao.yang@isye.gatech.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shaoyang",
                      family = "Ning",
                      role = "aut"),
               person(given = "Shihao",
                      family = "Yang",
                      role = c("aut", "cre"),
                      email = "shihao.yang@isye.gatech.edu"),
               person(given = c("S.", "C."),
                      family = "Kou",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                               user system elapsed
bootstrap_relative_efficiency 6.368  0.177   8.177
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
sdafilter 5.658      0   6.918
Maintainer: ‘David J. H. Shih <djh.shih@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("David", "J.", "H."),
                    family = "Shih",
                    role = c("aut", "cre"),
                    email = "djh.shih@gmail.com")
as necessary.
'library' or 'require' call not declared from: ‘magrittr’
Maintainer: ‘Haoran Li <hrli@ucdavis.edu>’

The Description field contains
  by Li et al., (2016) <arXiv:1609.08725>. Both one-sample and two-sample
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
ARHT 3.699  0.198   5.124
Maintainer: ‘Livio Finos <livio.finos@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Livio",
                      family = "Finos",
                      role = c("aut", "cre"),
                      email = "livio.finos@unipd.it"),
               person(given = "Jelle",
                      family = "Goeman",
                      role = "aut"),
               person(given = "Wouter",
                      family = "Weeda",
                      role = "aut"),
               person(given = "Jonathan",
                      family = "Rosenblatt",
                      role = "aut"),
               person(given = "Aldo",
                      family = "Solari",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘sample_ARMA_coef.R’
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
aicTable 4.14  0.065   6.203
Author field differs from that derived from Authors@R
  Author:    ‘Nicolas Frerebeau [aut, cre] (<https://orcid.org/0000-0001-5759-4944>), Brice Lebrun [art] (<https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (03pbgwk21), CNRS [fnd] (02feahw73)’
  Authors@R: ‘Nicolas Frerebeau [aut, cre] (ORCID: <https://orcid.org/0000-0001-5759-4944>), Brice Lebrun [art] (ORCID: <https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (ROR: <https://ror.org/03pbgwk21>), CNRS [fnd] (ROR: <https://ror.org/02feahw73>)’
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
Q.AR1 3.077  0.193   5.019
Specified C++11: please drop specification unless essential
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  SmoothMultiarrayModel.Rd: ChromosomalModel,
    CopyNumberSegmentationModel
  byPath.AffymetrixFileSet.Rd: GenericDataFile
  calculateBaseline.ChipEffectSet.Rd: getAverageFile
  doCRMAv1.Rd: Verbose
  doCRMAv2.Rd: Verbose
  doFIRMA.Rd: Verbose
  doGCRMA.Rd: Verbose
  doRMA.Rd: Verbose
  justRMA.Rd: Verbose
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  writeDataFrame.AromaUnitSignalBinaryFile.Rd: TabularTextFile
  writeDataFrame.AromaUnitSignalBinarySet.Rd: TabularTextFileSet
  writeDataFrame.AromaUnitTabularBinaryFile.Rd: TabularTextFile
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Antonio Profico <antonio.profico@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Profico",
                      role = c("aut", "cre"),
                      email = "antonio.profico@gmail.com"),
               person(given = "Costantino",
                      family = "Buzi",
                      role = "aut"),
               person(given = "Silvia",
                      family = "Castiglione",
                      role = "aut"),
               person(given = "Marina",
                      family = "Melchionna",
                      role = "aut"),
               person(given = "Paolo",
                      family = "Piras",
                      role = "aut"),
               person(given = "Pasquale",
                      family = "Raia",
                      role = "aut"),
               person(given = "Alessio",
                      family = "Veneziano",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
dta 4.759  0.123   6.379
Maintainer: ‘Rommy C. Olivari <rco1@de.ufpe.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Rommy", "C."),
                      family = "Olivari",
                      role = c("aut", "cre"),
                      email = "rco1@de.ufpe.br"),
               person(given = "Kelin",
                      family = "Zhong",
                      role = "aut"),
               person(given = c("Aldo", "M."),
                      family = "Garay",
                      role = "aut"),
               person(given = c("Victor", "H."),
                      family = "Lachos",
                      role = "aut"))
as necessary.
Maintainer: ‘James E. Pustejovsky <jepusto@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("James", "E."),
                      family = "Pustejovsky",
                      role = c("aut", "cre"),
                      email = "jepusto@gmail.com"),
               person(given = c("with", "contributions", "from", "Daniel", "M."),
                      family = "Swan",
                      role = "aut"))
as necessary.
Maintainer: ‘C. Beleites <claudia.beleites@chemometrix.eu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "C.",
                    family = "Beleites",
                    role = c("aut", "cre"),
                    email = "claudia.beleites@chemometrix.eu")
as necessary.
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘main.R’ ‘transformer.Rd’
Maintainer: ‘A.I. McLeod <aimcleod@uwo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("A.", "I."),
                      family = "McLeod",
                      role = "aut"),
               person(given = c("Mark", "M."),
                      family = "Meerschaert",
                      role = "aut"),
               person(given = "Farzad",
                      family = "Sabzikar",
                      role = "aut"),
               person(given = "A.I.",
                      family = "McLeod",
                      role = "cre",
                      email = "aimcleod@uwo.ca"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  artfima-package.Rd: ltsa
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘art_pals.R’ ‘art_pals.Rd’ ‘circle_data.R’ ‘circle_data.Rd’
    ‘grid_maker.R’ ‘group_numbers.R’ ‘packer.R’ ‘packer.Rd’ ‘rotator.R’
    ‘square_data.R’ ‘square_data.Rd’ ‘wave_data.R’ ‘wave_data.Rd’
Maintainer: ‘Pablo J. Villacorta <pjvi@decsai.ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Pablo", "J."),
                    family = "Villacorta",
                    role = c("aut", "cre"),
                    email = "pjvi@decsai.ugr.es")
as necessary.
Maintainer: ‘Michael Hahsler <mhahsler@lyle.smu.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/mhahsler/arulesCBA
which should likely be
  https://github.com/mhahsler/arulesCBA/issues
instead.
Maintainer: ‘Michael Hahsler <mhahsler@lyle.smu.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/mhahsler/arulesNBMiner
which should likely be
  https://github.com/mhahsler/arulesNBMiner/issues
instead.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot_arulesViz 5.334  0.227   7.008
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
calc_selection_weights 5.407  0.339   6.466
sample_recordings      5.462  0.137   6.763
acoustic_indices       4.062  0.236   5.562
Maintainer: ‘Dirk F. Moore <dirkfmoore@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dirk", "F."),
                    family = "Moore",
                    role = c("aut", "cre"),
                    email = "dirkfmoore@gmail.com")
as necessary.
checkRd: (-1) breast_cancer_clean_features.Rd:45: Escaped LaTeX specials: \&
Maintainer: ‘Brian <bleemayer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Brian", "Lee"),
                      family = "Mayer",
                      role = "aut"),
               person(family = "Brian",
                      role = "cre",
                      email = "bleemayer@gmail.com"))
as necessary.
Maintainer: ‘Jeremy Leipzig <leipzig@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jeremy",
                    family = "Leipzig",
                    role = c("aut", "cre"),
                    email = "leipzig@gmail.com")
as necessary.
Maintainer: ‘Nick Parsons <nick.parsons@warwick.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Parsons",
                    role = c("aut", "cre"),
                    email = "nick.parsons@warwick.ac.uk")
as necessary.
Maintainer: ‘Albrecht Gebhardt <albrecht.gebhardt@aau.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("S", "original", "by", "David", "W.", "Scott", "R", "port", "by", "Albrecht", "Gebhardt", "adopted", "to", "recent", "S-PLUS", "by", "Stephen", "Kaluzny"),
                      family = "<spk@insightful.com>",
                      role = "aut",
                      email = "spk@insightful.com"),
               person(given = "Albrecht",
                      family = "Gebhardt",
                      role = "cre",
                      email = "albrecht.gebhardt@aau.at"))
as necessary.
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "P."),
                    family = "Fay",
                    role = c("aut", "cre"),
                    email = "mfay@niaid.nih.gov")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  meldCD.Rd: binomMeld.test
  signTest.Rd: mcnemarExactDP, binom.exact
  wmwTest.Rd: wilcox_test
  wsrTest.Rd: wilcoxsign_test
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Lars Kotthoff <larsko@uwyo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bernd",
                      family = "Bischl",
                      role = "aut",
                      email = "bernd_bischl@gmx.net"),
               person(given = "Lars",
                      family = "Kotthoff",
                      role = c("aut", "cre"),
                      email = "larsko@uwyo.edu"),
               person(given = "Pascal",
                      family = "Kerschke",
                      role = c("ctb", "aut"),
                      email = "kerschke@uni-muenster.de"),
               person(given = "Damir",
                      family = "Pulatov",
                      role = c("ctb", "aut"),
                      email = "damirpolat@protonmail.com"))
as necessary.
checkRd: (-1) convertAlgoPerfToWideFormat.Rd:28: Lost braces
    28 | code{NA} means the performance value is not available, possibly because the algorithm run was aborted.
       |     ^
checkRd: (-1) parseASScenario.Rd:40: Lost braces
    40 |   code{NA} means the cost is not available, possibly because the feature computation was aborted.
       |       ^
checkRd: (-1) parseASScenario.Rd:47: Lost braces
    47 |   code{NA} means the cost is not available, possibly because the feature computation was aborted.
       |       ^
checkRd: (-1) parseASScenario.Rd:55: Lost braces
    55 |   code{NA} means the feature is not available, possibly because the feature computation was aborted.
       |       ^
checkRd: (-1) parseASScenario.Rd:62: Lost braces
    62 |   code{NA} means the feature is not available, possibly because the feature computation was aborted.
       |       ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  createCVSplits.Rd: write.arff
  summarizeLlamaExps.Rd: Registry, reduceResultsList
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plotCor      5.552  0.063   5.361
asmbPLSDA.cv 5.038  0.041   6.622
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
ASpredict.as_train        8.026  0.304  10.672
boxplots.as_data          7.391  0.067  10.129
figure_comparison.as_data 7.143  0.032   9.214
ranking.as_data           5.371  0.013   6.433
KPI_table                 4.865  0.058   6.891
KPI_summary_table         4.750  0.072   6.094
AStrain.as_data           4.357  0.028   5.388
Maintainer: ‘Damien R. Farine <dfarine@ab.mpg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Damien", "R."),
                    family = "Farine",
                    role = c("aut", "cre"),
                    email = "dfarine@ab.mpg.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
network_swap        11.247  0.155  15.138
network_permutation  6.298  0.015   7.960
get_network          4.492  0.071   7.047
Maintainer: ‘Matt Wayland <mw283@cam.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matt",
                    family = "Wayland",
                    role = c("aut", "cre"),
                    email = "mw283@cam.ac.uk")
as necessary.
Maintainer: ‘Vivien Goepp <vivien.goepp@gmail.com>’

The Description field contains
  Selection", <arXiv:1808.01770>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Il-Youp Kwak <ikwak2@cau.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Il-Youp",
                      family = "Kwak",
                      role = c("aut", "cre"),
                      email = "ikwak2@cau.ac.kr"),
               person(given = c("others", "in", "each", "function"),
                      family = "manual)",
                      role = "aut",
                      comment = "s"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ped.pine.Rd’ ‘ped.salmon.Rd’ ‘pheno.apple.Rd’ ‘pheno.pine.Rd’
    ‘pheno.salmon.Rd’
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
geno.salmon 4.446  0.209   5.206
Maintainer: ‘Miguel de Carvalho <miguel.decarvalho@ed.ac.uk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
resid_quasi 8.038   0.06  10.485
Maintainer: ‘Maximilian Nagl <maximilian.nagl@ur.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Maximilian",
                      family = "Nagl",
                      role = c("aut", "cre"),
                      email = "maximilian.nagl@ur.de"),
               person(given = "Yevhen",
                      family = "Havrylenko",
                      role = "aut"),
               person(given = "Marius",
                      family = "Pfeuffer",
                      role = "aut"),
               person(given = "Kevin",
                      family = "Jakob",
                      role = "aut"),
               person(given = "Matthias",
                      family = "Fischer",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Roesch",
                      role = "aut"))
as necessary.
Maintainer: ‘Rolf Turner <r.turner@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rolf",
                    family = "Turner",
                    role = c("aut", "cre"),
                    email = "r.turner@auckland.ac.nz")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) plot.AssetPricing.Rd:199-200: Lost braces
   199 |   yakka. (Note that \code{flap} stands for dQuote{function list
       |                                                  ^
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
xsolve 5.69  0.003   7.263
Maintainer: ‘Kuan-Yu (Alex) Chen <alexkychen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kuan-Yu",
                      family = "Chen",
                      role = c("aut", "cre"),
                      comment = "Alex"),
               person(given = c("Elizabeth", "A."),
                      family = "Marschall",
                      role = "aut"),
               person(given = c("Michael", "G."),
                      family = "Sovic",
                      role = "aut"),
               person(given = c("Anthony", "C."),
                      family = "Fries",
                      role = "aut"),
               person(given = c("H.", "Lisle"),
                      family = "Gibbs",
                      role = "aut"),
               person(given = c("Stuart", "A."),
                      family = "Ludsin",
                      role = "aut"),
               person(given = "Kuan-Yu",
                      family = "Chen",
                      role = "cre",
                      email = "alexkychen@gmail.com",
                      comment = "Alex"))
as necessary.
Maintainer: ‘Damien Farine <dfarine@orn.mpg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "William",
                      family = "Hoppitt",
                      role = "aut"),
               person(given = "Damien",
                      family = "Farine",
                      role = c("aut", "cre"),
                      email = "dfarine@orn.mpg.de"))
as necessary.
Maintainer: ‘Lin Wang <wanglin2009@amss.ac.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Lin",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "wanglin2009@amss.ac.cn"),
               person(given = "Wei",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Qizhai",
                      family = "Li",
                      role = "aut"),
               person(given = "Weicheng",
                      family = "Zhu",
                      role = "ctb"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  nmax3.Rd: pmvnorm
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Damien Farine <damien.farine@anu.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Damien",
                    family = "Farine",
                    role = c("aut", "cre"),
                    email = "damien.farine@anu.edu.au")
as necessary.
Maintainer: ‘Krämer Konrad <konrad_kraemer@yahoo.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Krämer",
                    family = "Konrad",
                    role = c("aut", "cre"),
                    email = "konrad_kraemer@yahoo.de")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/Konrad1991/ast2ast
which should likely be
  https://github.com/Konrad1991/ast2ast/issues
instead.
Specified C++11: please drop specification unless essential
checkRd: (-1) readOEM.Rd:34: Lost braces
    34 |   always, the identifier has the format YYYY-NNNP{PP}, where YYYY is the year
       |                                                  ^
checkRd: (-1) readOEM.Rd:36: Lost braces
    36 |   during year YYYY and P{PP} is a part specifier comprising 1 to 3 capital letters
       |                         ^
checkRd: (-1) readOEM.Rd:74-75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) readOEM.Rd:76-79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) readOEM.Rd:80-86: Lost braces in \itemize; \value handles \item{}{} directly
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  hpop.Rd: ode
  readGLONASSNavigationRINEX.Rd: nanotime
  readGPSNavigationRINEX.Rd: nanotime
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Charles J. Geyer <geyer@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Charles", "J."),
                    family = "Geyer",
                    role = c("aut", "cre"),
                    email = "geyer@umn.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  pickle.Rd: trust
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Ali Ghanbari  <a.ghanbari541@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Parinaz",
                      family = "Mehdipour",
                      role = "aut",
                      email = "mehdipoor.p@gmail.com"),
               person(given = "Ali",
                      family = "Ghanbari",
                      role = c("cre", "aut"),
                      email = "a.ghanbari541@gmail.com"),
               person(given = "Farshad",
                      family = "Farzadfar",
                      role = "cph",
                      email = "farzadfar3@yahoo.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
integratePower 2.647  0.075   5.089
Maintainer: ‘Andrew Harris <harris@astro.umd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "harris@astro.umd.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
EM 4.778  0.008   5.882
Maintainer: ‘Javaria Ahmad Khan <jakhan0@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javaria", "Ahmad"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "jakhan0@yahoo.com"),
               person(given = "Atif",
                      family = "Akbar.",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AsyK-package.Rd: mse
  Laplace.Rd: mse
  RIG.Rd: mse
  plot.Laplace.Rd: mse
  plot.RIG.Rd: mse
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Richard M. Single <rsingle@uvm.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Richard", "M."),
                    family = "Single",
                    role = c("aut", "cre"),
                    email = "rsingle@uvm.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
compute.ALD 4.002  0.265   5.077
Maintainer: ‘Berrie Zielman <berrie.zielman@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Berrie",
                    family = "Zielman",
                    role = c("aut", "cre"),
                    email = "berrie.zielman@gmail.com")
as necessary.
Maintainer: ‘Pierre Lafaye de Micheaux <lafaye@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cqls",
                      family = "Team",
                      role = "aut"),
               person(given = c("Pierre", "Lafaye"),
                      family = "de Micheaux",
                      role = "cre",
                      email = "lafaye@unsw.edu.au"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Shannon T. Holloway <shannon.t.holloway@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hongyuan",
                      family = "Cao",
                      role = "aut"),
               person(given = "Donglin",
                      family = "Zeng",
                      role = "aut"),
               person(given = "Jialiang",
                      family = "Li",
                      role = "aut"),
               person(given = c("Jason", "P."),
                      family = "Fine",
                      role = "aut"),
               person(given = c("Shannon", "T."),
                      family = "Holloway",
                      role = c("aut", "cre"),
                      email = "shannon.t.holloway@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
atable 5.66  0.374   7.671
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ATA.BoxCoxAttr.Rd: BoxCox, InvBoxCox, BoxCox.lambda
  ATA.Decomposition.Rd: stlplus
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
ATA.Accuracy 4.572  0.118   6.564
checkRd: (-1) ataCoKriging.Rd:52: Lost braces; missing escapes or markup?
    52 | only one contrained condition for all points and all variables, \\sum_{i=1}^n\\lambda_i +\\sum_{j=1}^m\\beta_j =1, assuming expected means of variables known and constant with the study area.
       |                                                                       ^
checkRd: (-1) ataCoKriging.Rd:52: Lost braces; missing escapes or markup?
    52 | only one contrained condition for all points and all variables, \\sum_{i=1}^n\\lambda_i +\\sum_{j=1}^m\\beta_j =1, assuming expected means of variables known and constant with the study area.
       |                                                                                                ^
'library' or 'require' call not declared from: ‘sp’
Maintainer: ‘Sokbae Lee <sl3841@columbia.edu>’

The Description field contains
  Pooling Limited Information across Observations," <arXiv:2111.05243>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) simulation_dgp.Rd:14: Lost braces; missing escapes or markup?
    14 | \item{x_discrete}{TRUE if the distribution of the covariate is uniform on {-3.0, -2.9, ..., 3.0} and
       |                                                                           ^
checkRd: (-1) simulation_dgp.Rd:23: Lost braces
    23 | \item{att_oracle}{the sample analog of E[D{Y(1) - Y(0)}|D=1]}
       |                                           ^
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
ATE.ERROR.Y 4.113  0.154    5.28
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
references_best 5.045  0.072   5.977
atime           3.923  0.166   5.062
atime_grid      3.987  0.091   5.184
Maintainer: ‘Vladimir Polony <podalv@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vladimir",
                    family = "Polony",
                    role = c("aut", "cre"),
                    email = "podalv@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
ChileClimateData 0.953  0.098   5.696
Maintainer: ‘Simon Mak <smak6@gatech.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Mak",
                    role = c("aut", "cre"),
                    email = "smak6@gatech.edu")
as necessary.

The Description field contains
  <arXiv:1712.03589>. This work was supported by USARO grant
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘atmopt-package.Rd’:
    \keyword{ Robust optimization, discrete optimizati [TRUNCATED]
Maintainer: ‘Emmanuel Blondel <emmanuel.blondel1@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/eblondel/atom4R
which should likely be
  https://github.com/eblondel/atom4R/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘atpol_grids.R’ ‘miscRscript.r’ ‘plot_points_on_atpol.R’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘catchment_sim.R’ ‘elementary_pop.R’
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
plot.alarm_plot_data 8.087  0.020   9.126
eval_metrics         6.444  0.051   7.481
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
f_plot_distrib_3D 5.968  1.101   8.119
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘convert.r’
Maintainer: ‘Debin Qiu <debinqiu@uga.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Debin",
                    family = "Qiu",
                    role = c("aut", "cre"),
                    email = "debinqiu@uga.edu")
as necessary.
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’

The Description field contains
  Implements the methods described in Moss (2019, <arxiv:1911.01576>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
cc 4.857  0.033   5.391
Maintainer: ‘Michel Ballings <Michel.Ballings@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michel",
                      family = "Ballings",
                      role = c("aut", "cre"),
                      email = "michel.ballings@gmail.com"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Maintainer: ‘Josh Gardner <jpgard@umich.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Bernhard Lehnert <bernhard.lehnert@med.uni-greifswald.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bernhard",
                    family = "Lehnert",
                    role = c("aut", "cre"),
                    email = "bernhard.lehnert@med.uni-greifswald.de")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘gg_freiburg.Rd’
Maintainer: ‘Simon Urbanek <simon.urbanek@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Urbanek",
                    role = c("aut", "cre"),
                    email = "simon.urbanek@r-project.org")
as necessary.
checkRd: (-1) audioSample.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) audioSample.Rd:21: Lost braces in \itemize; meant \describe ?
File ‘audio/libs/audio.so’:
  Found non-API calls to R: ‘EXTPTR_PTR’, ‘R_checkActivity’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Glen Meeden <glen@stat.umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Glen",
                      family = "Meeden.",
                      role = "aut",
                      email = "glen@stat.umn.edu"),
               person(given = "Glen",
                      family = "Meeden",
                      role = "cre",
                      email = "glen@stat.umn.edu"))
as necessary.
Maintainer: ‘Giancarlo Vercellino <giancarlo.vercellino@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Giancarlo",
                    family = "Vercellino",
                    role = c("aut", "cre"),
                    email = "giancarlo.vercellino@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bind_lr.Rd’ ‘lex_density.Rd’
Author field differs from that derived from Authors@R
  Author:    ‘J. Aravind [aut, cre] (<https://orcid.org/0000-0002-4791-442X>), S. Mukesh Sankar [aut] (<https://orcid.org/0000-0001-5459-392X>), Dhammaprakash Pandhari Wankhede [aut] (<https://orcid.org/0000-0001-6384-8664>), Vikender Kaur [aut] (<https://orcid.org/0000-0001-9698-7329>), ICAR-NBGPR [cph] (www.nbpgr.ernet.in)’
  Authors@R: ‘J. Aravind [aut, cre] (ORCID: <https://orcid.org/0000-0002-4791-442X>), S. Mukesh Sankar [aut] (ORCID: <https://orcid.org/0000-0001-5459-392X>), Dhammaprakash Pandhari Wankhede [aut] (ORCID: <https://orcid.org/0000-0001-6384-8664>), Vikender Kaur [aut] (ORCID: <https://orcid.org/0000-0001-9698-7329>), ICAR-NBGPR [cph] (url: www.nbpgr.ernet.in)’
Maintainer: ‘Qihuang Zhang <qihuang.zhang@uwaterloo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Qihuang",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "qihuang.zhang@uwaterloo.ca"),
               person(given = c("Grace", "Y."),
                      family = "Yi",
                      role = "aut",
                      email = "yyi@uwaterloo.ca"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
aum_diffs_penalty   4.244  0.066   5.619
aum_linear_model_cv 3.823  0.067   5.307
Maintainer: ‘Aritra Banerjee <aritra306@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aritra",
                    family = "Banerjee",
                    role = c("aut", "cre"),
                    email = "aritra306@gmail.com")
as necessary.
Maintainer: ‘Dai Feng <daifeng.stat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dai",
                      family = "Feng",
                      role = c("aut", "cre"),
                      email = "daifeng.stat@gmail.com"),
               person(given = "Damjan",
                      family = "Manevski",
                      role = "auc"),
               person(given = c("Maja", "Pohar"),
                      family = "Perme",
                      role = "auc"))
as necessary.
Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
Maintainer: ‘Vitor Cerqueira <cerqueira.vitormanuel@gmail.com>’

The Description field contains
  arXiv:1706.09367.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Dennis Robert <dennis.robert.nm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dennis",
                    family = "Robert",
                    role = c("aut", "cre"),
                    email = "dennis.robert.nm@gmail.com")
as necessary.
checkRd: (-1) get_candidate_covariates.Rd:50: Lost braces
    50 | \item \code{covars_data}   {The \code{data.frame} that is filtered out of \code{df} with only the selected \code{covars}}. The values of the
       |                            ^
checkRd: (-1) get_candidate_covariates.Rd:53: Lost braces
    53 | \item \code{patientIds}   {The list of patient ids present in the original input \code{df}. This is exactly the same as the input \code{patientIdVector}}
       |                           ^
checkRd: (-1) get_prioritised_covariates.Rd:40: Lost braces
    40 | \item \code{multiplicative_bias}{The absolute log of the multiplicative bias term for each of the auto-selected prioritised covariates}
       |                                 ^
checkRd: (-1) get_recurrence_covariates.Rd:34: Lost braces
    34 | \item \code{patientIds}   {The list of patient ids present in the original input \code{df}. This is exactly the same as the input \code{patientIdVector}}
       |                           ^
Maintainer: ‘ShengLi Tzeng <slt.cmu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "ShengLi",
                      family = "Tzeng",
                      role = c("aut", "cre"),
                      email = "slt.cmu@gmail.com"),
               person(given = "Hsin-Cheng",
                      family = "Huang",
                      role = "aut"),
               person(given = "Wen-Ting",
                      family = "Wang",
                      role = "ctb"),
               person(given = "Douglas",
                      family = "Nychka",
                      role = "ctb"),
               person(given = "Colin",
                      family = "Gillespie",
                      role = "ctb"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Joshua French <joshua.french@ucdenver.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joshua",
                    family = "French",
                    role = c("aut", "cre"),
                    email = "joshua.french@ucdenver.edu")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
MFA_ECM 6.260  0.027   6.968
AMFA    3.493  0.088   5.410
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
auto_MrP 4.694  0.166   5.921
Maintainer: ‘Navinkumar Nedunchezhian <navinkumar.nedunchezhian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Navinkumar",
                    family = "Nedunchezhian",
                    role = c("aut", "cre"),
                    email = "navinkumar.nedunchezhian@gmail.com")
as necessary.
Maintainer: ‘Yuan Tang <terrytangyuan@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Yao Geng <gengyao0103521@qq.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaoyu",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Yao",
                      family = "Geng",
                      role = "cre",
                      email = "gengyao0103521@qq.com"))
as necessary.
checkRd: (-1) Autoplotprotein-package.Rd:27: Lost braces
    27 | code{\link{help}}
       |     ^
checkRd: (-1) Autoplotprotein.Rd:25: Lost braces
    25 | code{\link{help}}
       |     ^
checkRd: (-1) data.Rd:22: Lost braces
    22 | code{\link{help}}
       |     ^
checkRd: (-1) domain_data.Rd:29: Lost braces
    29 | code{\link{help}}
       |     ^
checkRd: (-1) length_data.Rd:32: Lost braces
    32 | code{\link{help}}
       |     ^
checkRd: (-1) plotdomain.Rd:30: Lost braces
    30 | code{\link{help}}
       |     ^
checkRd: (-1) plotmutagensis.Rd:30: Lost braces
    30 | code{\link{help}}
       |     ^
checkRd: (-1) plotsite.Rd:30: Lost braces
    30 | code{\link{help}}
       |     ^
checkRd: (-1) site_data.Rd:30: Lost braces
    30 | code{\link{help}}
       |     ^
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
modelPlot 4.283  0.036   6.193
checkRd: (-1) noauto_scorecard.Rd:20: Lost braces; missing escapes or markup?
    20 | \item{fit}{See glm {stats}.}
       |                    ^
checkRd: (-1) noauto_scorecard2.Rd:21: Lost braces; missing escapes or markup?
    21 | \item{fit}{See glm {stats}.}
       |                    ^
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
bins_chim         10.811  0.016  13.402
filter_var         6.375  0.022   8.144
auto_scorecard     5.582  0.326   7.468
best_vs            5.065  0.052   6.605
best_iv            4.767  0.078   5.762
bins_unsupervised  4.440  0.027   5.091
Maintainer: ‘Feng Xie <xief@u.duke.nus.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
AutoScore_rank 5.193  0.205   7.117
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
generate_slides   8.971  0.176  11.965
t_ae_pt_soc_slide 6.603  0.054   8.736
t_dm_slide        5.717  0.079   8.490
gt_t_dm_slide     5.400  0.095   6.978
t_ae_summ_slide   5.412  0.047   8.051
t_ae_slide        5.354  0.042   6.692
t_aesi_slide      3.981  0.004   5.208
t_ae_pt_slide     3.675  0.063   5.577
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
auto_variable_contributions 5.414  0.282   5.992
Maintainer: ‘Aaron England <aaron.england24@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "England",
                    role = c("aut", "cre"),
                    email = "aaron.england24@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
AutoTransQF 13.532    0.1  16.398
Maintainer: ‘Vivien Roussez <vivien.roussez@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vivien",
                    family = "Roussez",
                    role = c("aut", "cre"),
                    email = "vivien.roussez@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
getBestModel 7.98  0.299  11.066
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
postStr_wt 4.918  0.072   6.315
uwt        4.799  0.046   5.823
rake_wt    4.685  0.006   5.770
simulate   4.470  0.043   5.981
checkRd: (-1) avar_mo_cpp.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) avar_mo_cpp.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) avar_mo_cpp.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) avar_to_cpp.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) avar_to_cpp.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) avar_to_cpp.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Christina Harvey <harveyca@umich.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
calc_inertia_conesolid 4.81  0.141   6.195
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
get_elements 1.606  0.133   5.419
Maintainer: ‘Gergely Daroczi <daroczig@rapporter.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gergely",
                    family = "Daroczi",
                    role = c("aut", "cre"),
                    email = "daroczig@rapporter.net")
as necessary.
Maintainer: ‘Gergely Daroczi <daroczig@rapporter.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gergely",
                    family = "Daroczi",
                    role = c("aut", "cre"),
                    email = "daroczig@rapporter.net")
as necessary.
Maintainer: ‘Gaurav Sood <gsood07@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Antoine Sachet <antoine.sac@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jonathan Stott <jonathan.stott@magairports.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) ec2_create_security_group.Rd:66: Escaped LaTeX specials: \#
checkRd: (-1) ec2_create_security_group.Rd:66: Escaped LaTeX specials: \$
checkRd: (-1) ec2_create_security_group.Rd:79: Escaped LaTeX specials: \#
checkRd: (-1) ec2_create_security_group.Rd:79: Escaped LaTeX specials: \$
Maintainer: ‘Simon Urbanek <simon.urbanek@R-project.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Simon Urbanek <simon.urbanek@R-project.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Antoine Sachet <antoine.sac@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Simon Urbanek <simon.urbanek@R-project.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jonathan Stott <jonathan.stott@magairports.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Antoine Sachet <antoine.sac@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Antoine Sachet <antoine.sac@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) cosmos_mongo.Rd:21: Lost braces; missing escapes or markup?
    21 | \item{host}{For \code{cosmos_mongo_endpoint}, the URL of the Cosmos DB MongoDB endpoint. Usually of the form "https://{account-name}.mongo.cosmos.azure.com:443/".}
       |                                                                                                                       ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  call_batch_endpoint.Rd: AzureToken
  call_graph.Rd: AzureToken
  graph_login.Rd: get_azure_token
  ms_graph.Rd: get_azure_token
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AzureKusto.Rd: dbReadTable, dbWriteTable, dbGetQuery, dbSendStatement
  DBI_query.Rd: dbConnect, dbReadTable, dbWriteTable
  DBI_table.Rd: dbConnect
  az_kusto.Rd: az_resource_group
  copy_to.kusto_database_endpoint.Rd: collect
  kusto-DBI.Rd: dbConnect, dbDisconnect, dbCanConnect, dbExistsTable,
    dbCreateTable, dbRemoveTable, dbReadTable, dbWriteTable,
    dbGetQuery, dbSendQuery, dbFetch, dbSendStatement, dbExecute,
    dbListFields, dbColumnInfo
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  az_resource_group.Rd: AzureToken
  az_rm.Rd: AzureToken
  az_subscription.Rd: AzureToken
  azure_login.Rd: AzureToken
  call_azure.Rd: AzureToken
  utils.Rd: AzureToken
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  az_storage.Rd: az_resource_group
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
babelBpopIdx 3.669  0.568   6.215
Maintainer: ‘Adam B. Olshen <adam.olshen@ucsf.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Adam", "B."),
                      family = "Olshen",
                      role = c("aut", "cre"),
                      email = "adam.olshen@ucsf.edu"),
               person(given = c("Richard", "A."),
                      family = "Olshen",
                      role = "aut"),
               person(given = c("Barry", "S."),
                      family = "Taylor",
                      role = "aut"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://orcid.org/0000-0003-4719-7472>, joelnitta)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Robin", "K.", "S."),
                    family = "Hankin",
                    role = c("aut", "cre"),
                    email = "hankin.robin@gmail.com")
as necessary.
Maintainer: ‘J. Jack Lee <jjlee@mdanderson.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nan",
                      family = "Chen",
                      role = "aut"),
               person(given = c("J.", "Jack"),
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "jjlee@mdanderson.org"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  backbone.suggest.Rd: Matrix, igraph
  disparity.Rd: Matrix, igraph
  fdsm.Rd: Matrix, igraph
  fixedcol.Rd: Matrix, igraph
  fixedfill.Rd: Matrix, igraph
  fixedrow.Rd: Matrix, igraph
  global.Rd: Matrix, igraph
  lans.Rd: Matrix, igraph
  mlf.Rd: Matrix, igraph
  osdsm.Rd: Matrix, igraph
  sdsm.Rd: Matrix, igraph
  sparsify.Rd: Matrix, igraph
  sparsify.with.geometric.Rd: Matrix, igraph
  sparsify.with.gspar.Rd: Matrix, igraph
  sparsify.with.hypergeometric.Rd: Matrix, igraph
  sparsify.with.jaccard.Rd: Matrix, igraph
  sparsify.with.localdegree.Rd: Matrix, igraph
  sparsify.with.lspar.Rd: Matrix, igraph
  sparsify.with.meetmin.Rd: Matrix, igraph
  sparsify.with.quadrilateral.Rd: Matrix, igraph
  sparsify.with.simmelian.Rd: Matrix, igraph
  sparsify.with.skeleton.Rd: Matrix, igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Christina Heinze-Deml <heinzedeml@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christina",
                    family = "Heinze-Deml",
                    role = c("aut", "cre"),
                    email = "heinzedeml@stat.math.ethz.ch")
as necessary.

The Description field contains
  more details, see <arXiv:1506.02494>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Daniel Gerlanc <dgerlanc@enplusadvisors.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jeff",
                      family = "Enos",
                      role = "aut",
                      email = "jeff@kanecap.com"),
               person(given = "David",
                      family = "Kane",
                      role = "aut",
                      email = "dave@kanecap.com"),
               person(given = c("with", "contributions", "from", "Kyle"),
                      family = "Campbell",
                      role = "aut",
                      email = "kyle.w.campbell@williams.edu"),
               person(given = "Daniel",
                      family = "Gerlanc",
                      role = c("aut", "cre"),
                      email = "daniel@gerlanc.com"),
               person(given = "Aaron",
                      family = "Schwartz",
                      role = "aut",
                      email = "Aaron.J.Schwartz@williams.edu"),
               person(given = "Daniel",
                      family = "Suo",
                      role = "aut",
                      email = "danielsuo@gmail.com"),
               person(given = "Alexei",
                      family = "Colin",
                      role = "aut",
                      email = "acolin@fas.harvard.edu"),
               person(given = c("and", "Luyi"),
                      family = "Zhao",
                      role = "aut",
                      email = "luyizhao@gmail.com"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘aloocv.R’ ‘cohortODX.R’ ‘computeEndpoints.R’ ‘fit_baclava.R’
    ‘predictODX.R’ ‘s3_methods.R’ ‘utilities.R’
Maintainer: ‘Denis Talbot <denis.talbot@fmed.ulaval.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Denis",
                      family = "Talbot",
                      role = c("aut", "cre"),
                      email = "denis.talbot@fmed.ulaval.ca"),
               person(given = "Genevieve",
                      family = "Lefebvre",
                      role = "aut"),
               person(given = "Juli",
                      family = "Atherton",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  BACprior.lm.Rd: regsubsets
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
BACprior.lm 5.204  0.174   6.883
Maintainer: ‘Chi Wang <chi.wang@uky.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chi",
                    family = "Wang",
                    role = c("aut", "cre"),
                    email = "chi.wang@uky.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Author field differs from that derived from Authors@R
  Author:    ‘Guangchuang Yu [aut, cre] (<https://orcid.org/0000-0002-6485-8781>), Gregor de Cillia [ctb], Dirk Eddelbuettel [ctb], Maëlle Salmon [ctb], Robrecht Cannoodt [ctb] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Alexander Rossell Hayes [ctb] (<https://orcid.org/0000-0001-9412-0457>, rossellhayes), Waldir Leoncio [ctb], Matthew Schuelke [ctb] (<https://orcid.org/0000-0001-5755-1725>, the-mad-statter)’
  Authors@R: ‘Guangchuang Yu [aut, cre] (ORCID: <https://orcid.org/0000-0002-6485-8781>), Gregor de Cillia [ctb], Dirk Eddelbuettel [ctb], Maëlle Salmon [ctb], Robrecht Cannoodt [ctb] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Alexander Rossell Hayes [ctb] (ORCID: <https://orcid.org/0000-0001-9412-0457>, github: rossellhayes), Waldir Leoncio [ctb], Matthew Schuelke [ctb] (ORCID: <https://orcid.org/0000-0001-5755-1725>, github: the-mad-statter)’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘round_rect.r’ ‘waffle.r’
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘baf.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  baf.Rd: tibble
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
augment.bage_mod 8.501  0.271  11.982
report_sim       3.158  0.001   5.059
Maintainer: ‘Rafael Santos <rafael.jpsantos@outlook.com>’

The Description field contains
  <arXiv:2001.00636>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
bagged.outliertrees         0.555  0.098   8.323
predict.bagged.outliertrees 0.446  0.005   8.902
print.bagged.outlieroutputs 0.367  0.005   9.083
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  forest_plot.Rd: forestplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
baggr_plot 4.368  0.095   6.928
Maintainer: ‘Jiawei Zhang <zhan4362@umn.edu>’

The Description field contains
  can be found in Zhang, Ding and Yang (2021) <arXiv:1911.03063v2>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘get_cyclone.R’
Maintainer: ‘Damien Challet <damien.challet@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christian",
                      family = "Bongiorno",
                      role = "aut"),
               person(given = "Damien",
                      family = "Challet",
                      role = c("aut", "cre"),
                      email = "damien.challet@gmail.com"))
as necessary.

The Description field contains
  hierarchies (2020) <arXiv:2003.05807> and Ch. Bongiorno and D. Challet,
  cleaning (2020) <arXiv:2005.08703>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Caspar J van Lissa <c.j.vanlissa@tilburguniversity.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/cjvanlissa/bain/
which should likely be
  https://github.com/cjvanlissa/bain/issues
instead.
Maintainer: ‘Hao Chen <hxchen@ucdavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hao",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "hxchen@ucdavis.edu"),
               person(given = "Dylan",
                      family = "Small",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  fit_lgmr.Rd: stan_model
  infer_data_and_decision_model.Rd: sampling, tibble
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Kyungtaek Park <qkrrudxor147@snu.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kyungtaek",
                    family = "Park",
                    role = c("aut", "cre"),
                    email = "qkrrudxor147@snu.ac.kr")
as necessary.
Maintainer: ‘Pawel Dlotko <pdlotko@gmail.com>’

The Description field contains
  topological data analysis" by Pawel Dlotko, (2019) <arXiv:1901.07410>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Mike Kleinsasser <mkleinsa@umich.edu>’

The Description field contains
  <doi:10.1111/biom.13189> and Song et al (2020) <arXiv:2009.11409>,
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
getEventData 4.22   0.02   5.025
Maintainer: ‘Volker Schmid <volker.schmid@lmu.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jeff Gill <jgill5402@mac.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jonathan",
                      family = "Homola",
                      role = "aut"),
               person(given = "Danielle",
                      family = "Korman",
                      role = "aut"),
               person(given = "Jacob",
                      family = "Metz",
                      role = "aut"),
               person(given = "Miguel",
                      family = "Pereira",
                      role = "aut"),
               person(given = "Mauricio",
                      family = "Vela",
                      role = "aut"),
               person(given = "Jeff",
                      family = "Gill",
                      role = c("aut", "cre"),
                      email = "jgill5402@mac.com"))
as necessary.
Maintainer: ‘Balasubramanian Narasimhan <naras@stanford.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/motiwari/BanditPAM
which should likely be
  https://github.com/motiwari/BanditPAM/issues
instead.
Author field differs from that derived from Authors@R
  Author:    ‘Balasubramanian Narasimhan [aut, cre], Mo Tiwari [aut] (https://motiwari.com)’
  Authors@R: ‘Balasubramanian Narasimhan [aut, cre], Mo Tiwari [aut] (website: https://motiwari.com)’
possible bashism in configure.ac line 53 (unsafe echo with backslash):
      echo '         To use all CPU cores, you should install OpenMP by running\n                    '
Maintainer: ‘Markus Loecher <markus.loecher@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thomas",
                      family = "Lotze",
                      role = "aut"),
               person(given = "Markus",
                      family = "Loecher",
                      role = c("aut", "cre"),
                      email = "markus.loecher@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
plot_cumulative_assignment 5.272  0.148   7.649
run_experiment             3.752  0.019   5.232
Maintainer: ‘Arya Ebadi <aeba3842@uni.sydney.edu.au>’

The Description field contains
  <arXiv:2302.11837>. Such setups include target-decoy competition (TDC)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
hef          5.524  0.049   7.398
pp_check.hef 4.604  0.087   5.686
hanova1      3.619  0.106   5.420
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "Bill.Venables@gmail.com")
as necessary.
Maintainer: ‘Chen Dong <chendong.math.umd@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chen",
                      family = "Dong",
                      role = c("aut", "cre"),
                      email = "chendong.math.umd@gmail.com"),
               person(given = "Michel",
                      family = "Wedel",
                      role = "aut"),
               person(given = "Anna",
                      family = "Kopyakova",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  BANOVA.run.Rd: rstan
  pairs.BANOVA.Rd: rstan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  getBanterModel.Rd: randomForest
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Eduardo Flores <eduardo@enelmargen.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Eduardo",
                    family = "Flores",
                    role = c("aut", "cre"),
                    email = "eduardo@enelmargen.org")
as necessary.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘dexpfit.R’ ‘expfit.R’ ‘icarfit.R’ ‘logisticfit.R’
Maintainer: ‘Roman Hornung <hornung@ibe.med.uni-muenchen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Roman",
                      family = "Hornung",
                      role = c("aut", "cre"),
                      email = "hornung@ibe.med.uni-muenchen.de"),
               person(given = "David",
                      family = "Causeur",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘János Hevner <hevnerjanos@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "János",
                    family = "Hevner",
                    role = c("aut", "cre"),
                    email = "hevnerjanos@hotmail.com")
as necessary.
checkRd: (-1) barcoding.spe.identify2.Rd:27: Lost braces; missing escapes or markup?
    27 | read.dna() from package {ape} was used to obtain DNAbin object for unaligned non-coding barcodes.
       |                         ^
Maintainer: ‘Kamil Erguler <k.erguler@cyi.ac.cy>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kamil",
                    family = "Erguler",
                    role = c("aut", "cre"),
                    email = "k.erguler@cyi.ac.cy")
as necessary.
Maintainer: ‘Adam Kapelner <kapelner@qc.cuny.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adam",
                      family = "Kapelner",
                      role = c("aut", "cre"),
                      email = "kapelner@qc.cuny.edu"),
               person(given = "Justin",
                      family = "Bleich",
                      role = "aut",
                      comment = c(ROR = "R package")),
               person(given = c("see", "COPYRIGHTS", "file", "for", "the", "authors", "of", "the", "java"),
                      family = "libraries",
                      role = "aut"))
as necessary.
Maintainer: ‘Adam Kapelner <kapelner@qc.cuny.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adam",
                      family = "Kapelner",
                      role = c("aut", "cre"),
                      email = "kapelner@qc.cuny.edu"),
               person(given = "Justin",
                      family = "Bleich",
                      role = "aut",
                      comment = c(ROR = "R package")))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘acceptenceRate.R’ ‘extractTreeData.R’ ‘generic_functions.R’
    ‘permVint.R’ ‘plot_all_trees.R’ ‘splitDensity.R’ ‘treeBarPlot.R’
    ‘treeDataframe.R’ ‘treeList.R’ ‘vintPlot.R’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
plotTrees 9.911   0.11  11.335
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
predict.criskbart  4.865  0.605  10.839
mc.crisk.pwbart    4.960  0.446  11.557
mc.crisk2.pwbart   2.823  0.524   5.159
predict.crisk2bart 2.745  0.555   5.956
rs.pbart           1.240  1.592   7.924
'library' or 'require' calls not declared from:
  ‘rpart’ ‘rpart.plot’
Maintainer: ‘Qingyan Xiang <qyxiang@bu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Qingyan",
                      family = "Xiang",
                      role = c("aut", "cre"),
                      email = "qyxiang@bu.edu"),
               person(given = "Naveen",
                      family = "Narisetty",
                      role = "aut",
                      email = "naveen@illinois.edu"))
as necessary.
Maintainer: ‘Simon Urbanek <Simon.Urbanek@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Urbanek",
                    role = c("aut", "cre"),
                    email = "Simon.Urbanek@r-project.org")
as necessary.
File ‘base64enc/libs/base64enc.so’:
  Found non-API call to R: ‘SETLENGTH’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘chadwick_installation.R’
checkRd: (-1) bd_collect.Rd:30: Lost braces; missing escapes or markup?
    30 | the {dplyr}'s verbs and thus use it in local memory completely.
       |     ^
checkRd: (-1) bd_write.Rd:52: Lost braces; missing escapes or markup?
    52 | Writes a remote table to disk that was called via {bdplyr}.
       |                                                   ^
checkRd: (-1) bdplyr.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Compatibility with {dplyr} verbs without using SQL language}
       |                           ^
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
dummyClassifier 4.208  0.309   7.155
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
tidySet 5.824  0.281   8.535
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
classify 4.487  0.261   5.868
Maintainer: ‘Marco Vidal-Cordasco <marcovidalcordasco@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ana", "B."),
                      family = "Marín-Arroyo",
                      role = "aut"),
               person(given = "David",
                      family = "Ocio",
                      role = "aut"),
               person(given = "Marco",
                      family = "Vidal-Cordasco",
                      role = "cre",
                      email = "marcovidalcordasco@gmail.com"),
               person(given = "Delphine",
                      family = "Vettese"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
scatterplot      8.191  0.048  11.015
plot.kclustering 7.314  0.044   8.933
kclustering      7.088  0.049   8.549
plot.hclustering 6.914  0.019   8.413
hclustering      6.862  0.040   9.957
shotchart        6.512  0.036   9.021
Maintainer: ‘Michael J. Kane <michael.kane@yale.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
interim_posterior 4.120  0.000   5.654
check_mon_between 4.041  0.062   5.066
Author field differs from that derived from Authors@R
  Author:    ‘Lukas Baumann [aut, cre] (<https://orcid.org/0000-0001-7931-7470>), Lukas Sauer [ctb] (0000-0002-1340-9994)’
  Authors@R: ‘Lukas Baumann [aut, cre] (ORCID: <https://orcid.org/0000-0001-7931-7470>), Lukas Sauer [ctb] (ORIC: 0000-0002-1340-9994)’
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
adjust_lambda         8.431  0.036  10.349
adjust_lambda.default 6.411  0.011   7.474
File ‘BAS/libs/BAS.so’:
  Found non-API call to R: ‘SETLENGTH’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
bas.lm  5.060  0.126   5.827
bas.glm 4.293  0.098   5.503
Maintainer: ‘Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mohamed", "El", "Fodil"),
                    family = "Ihaddaden",
                    role = c("aut", "cre"),
                    email = "ihaddaden.fodeil@gmail.com")
as necessary.
Maintainer: ‘Michel Lang <michellang@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bernd",
                      family = "Bischl",
                      role = "aut",
                      email = "bernd_bischl@gmx.net"),
               person(given = "Michel",
                      family = "Lang",
                      role = c("aut", "cre"),
                      email = "michellang@gmail.com"),
               person(given = "Olaf",
                      family = "Mersmann",
                      role = "aut",
                      email = "olafm@p-value.net"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) ExperimentJob.Rd:14: Lost braces
    14 |   \item{\code{algo.id} [\code{character(1)}]:}{algo.id}{Algorithm ID.}
       |                                                        ^
checkRd: (-1) getAlgorithmIds.Rd:13: Lost braces
    13 | \item{ids}{[code{integer}]\cr
       |                 ^
checkRd: (-1) getProblemIds.Rd:13: Lost braces
    13 | \item{ids}{[code{integer}]\cr
       |                 ^
checkRd: (-1) makeExperimentRegistry.Rd:28: Lost braces
    28 | Default is dQuote{<name of registry>_files} in current working directory.}
       |                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  getExperimentParts.Rd: Job
  reduceResultsExperimentsParallel.Rd: batchMapQuick
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
addExperiments 7.788  0.229  10.352
getResultVars  7.819  0.048  11.073
getIndex       5.234  0.038   6.660
Maintainer: ‘Bernd Bischl <bernd_bischl@gmx.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bernd",
                      family = "Bischl",
                      role = c("aut", "cre"),
                      email = "bernd_bischl@gmx.net"),
               person(given = "Michel",
                      family = "Lang",
                      role = "aut",
                      email = "michellang@gmail.com"),
               person(given = "Henrik",
                      family = "Bengtsson",
                      role = "aut",
                      email = "henrikb@braju.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
batchReduceResults 6.809  0.044   9.544
batchReduce        5.801  0.042   8.715
batchMapResults    5.672  0.075   7.433
submitJobs         4.903  0.023   6.792
reduceResults      3.052  0.020   5.217
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘batchLLM.R’ ‘batchLLM_shiny.R’
Maintainer: ‘John Hughes <drjphughesjr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Murali",
                      family = "Haran",
                      role = "aut",
                      email = "mharan@stat.psu.edu"),
               person(given = "John",
                      family = "Hughes",
                      role = c("aut", "cre"),
                      email = "drjphughesjr@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
plotSampledClusterMeans 6.278  0.055   7.927
Maintainer: ‘Thomas Hoffmann <tjhoffm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Hoffmann",
                    role = c("aut", "cre"),
                    email = "tjhoffm@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sherry Zhao<sxzhao@gwu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sherry",
                    family = "Zhao",
                    role = c("aut", "cre"),
                    email = "sxzhao@gwu.edu")
as necessary.
checkRd: (-1) JobCollection.Rd:41: Lost braces
    41 |  \item{namespaces}{code{character} with required packages to load via \code{\link[base]{requireNamespace}}.}
       |                        ^
checkRd: (-1) addAlgorithm.Rd:31: Lost braces
    31 | Algorithms are functions which get the code{data} part as well as the problem instance (the return value of the
       |                                            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  JoinTables.Rd: data.table
  Worker.Rd: R6Class
  addExperiments.Rd: data.table
  batchMap.Rd: data.table
  batchMapResults.Rd: data.table
  batchReduce.Rd: data.table
  estimateRuntimes.Rd: data.table
  findJobs.Rd: data.table
  getErrorMessages.Rd: data.table
  getJobTable.Rd: data.table
  grepLogs.Rd: data.table
  killJobs.Rd: data.table
  removeExperiments.Rd: data.table
  resetJobs.Rd: data.table
  runHook.Rd: data.table
  submitJobs.Rd: data.table
  summarizeExperiments.Rd: data.table
  unwrap.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Deepankar Basu <dbasu@umass.edu>’

The Description field contains
  to the method of Basu (2022) <arXiv:2203.12431>.  You supply the data,
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Oliver Keyes <ironholds@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Oliver",
                      family = "Keyes",
                      role = c("aut", "cre"),
                      email = "ironholds@gmail.com"),
               person(given = c("Ruben", "C."),
                      family = "Arslan",
                      role = "ctb"),
               person(given = "Christopher",
                      family = "Akiki",
                      role = "ctb"),
               person(given = "Mine",
                      family = "Cetinkaya-Rundel",
                      role = "ctb"),
               person(given = "Peter",
                      family = "Meissner",
                      role = "ctb"),
               person(given = "Ilaria",
                      family = "Prosdocimi",
                      role = "ctb"),
               person(given = "Thomas",
                      family = "Leeper",
                      role = "ctb"),
               person(given = "Amy",
                      family = "Lee",
                      role = "ctb"),
               person(given = "Adolfo",
                      family = "Álvarez",
                      role = "ctb"))
as necessary.
Maintainer: ‘Chunqiao Luo <chunqiaoluo@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Evan A Martin <evanamartin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Evan", "A"),
                      family = "Martin",
                      role = c("aut", "cre"),
                      email = "evanamartin@gmail.com"),
               person(given = c("Audrey", "Qiuyan"),
                      family = "Fu",
                      role = "aut"))
as necessary.

The Description field contains
  References: Martin and Fu (2019) <arXiv:1909.10678>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) plotDistributions.Rd:32: Lost braces
    32 | plot{...} functions are generated programmatically so the function calls in
       |     ^
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
bayes_ammi 8.689  0.374  10.634
Maintainer: ‘Riko Kelter <riko_k@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Riko",
                    family = "Kelter",
                    role = c("aut", "cre"),
                    email = "riko_k@gmx.de")
as necessary.

The Description field contains
  mixtures, see Kelter (2019) <arXiv:1906.07524>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Jane Pan <jpan1@ucla.edu>’

The Description field contains
  (2021) <arXiv:2112.03509>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  pwr_curve.Rd: ggplot2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bayes_sim 5.056  0.161   7.103
Maintainer: ‘Achal Lama <achal.lama@icar.gov.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Achal",
                      family = "Lama",
                      role = c("aut", "cre"),
                      email = "achal.lama@icar.gov.in"),
               person(given = c("Girish", "K"),
                      family = "Jha",
                      role = "aut"),
               person(given = c("K", "N"),
                      family = "Singh",
                      role = "aut"),
               person(given = "Bishal",
                      family = "Gurung",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
BayesianBEKK 6.194   0.05   8.822
Maintainer: ‘Panagiotis Papastamoulis <papapast@yahoo.gr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Panagiotis",
                    family = "Papastamoulis",
                    role = c("aut", "cre"),
                    email = "papapast@yahoo.gr")
as necessary.
checkRd: (-1) coupledMetropolis.Rd:83-85: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:86-88: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:89-91: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:92-94: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:95-97: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:98-100: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:101-103: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:104-106: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:107-109: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:110-112: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:113-115: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:116-118: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:119-121: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:122-124: Lost braces in \itemize; meant \describe ?
checkRd: (-1) coupledMetropolis.Rd:125-127: Lost braces in \itemize; meant \describe ?
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bayesboot 5.756  0.026   6.867
Maintainer: ‘Li-Syuan Hong <lisyuan@nhri.org.tw>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Li-Syuan",
                    family = "Hong",
                    role = c("aut", "cre"),
                    email = "lisyuan@nhri.org.tw")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                               user system elapsed
summary.ClustCpObj            4.541  0.063   6.050
print.ClustCpObj              4.539  0.059   7.086
posterior_estimate.ClustCpObj 4.255  0.140   5.866
Maintainer: ‘Stanley E. Lazic <stan.lazic@cantab.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bruno",
                      family = "Contrino",
                      role = "aut"),
               person(given = c("Stanley", "E."),
                      family = "Lazic",
                      role = c("aut", "cre"),
                      email = "stan.lazic@cantab.net"))
as necessary.
Maintainer: ‘Nick Golding <nick.golding.research@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nick",
                      family = "Golding",
                      role = c("aut", "cre"),
                      email = "nick.golding.research@gmail.com"),
               person(given = c("David", "J."),
                      family = "Harris",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘BayesComm-package.Rd’:
    http://dx.doi.org/10.6084/m9.figshare.767289
checkRd: (-1) BayesComm-package.Rd:33: Escaped LaTeX specials: \&
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.bayescomm.Rd: plot.mcmc
  summary.bayescomm.Rd: summary.mcmc
  window.bayescomm.Rd: window.mcmc
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Specified C++11: please drop specification unless essential
Maintainer: ‘Aldo M. Garay <medina_garay@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Aldo", "M."),
                      family = "Garay",
                      role = c("aut", "cre"),
                      email = "medina_garay@yahoo.com"),
               person(given = c("Monique", "B."),
                      family = "Massuia",
                      role = "aut",
                      email = "moniquemassuia@gmail.com"),
               person(given = c("Victor", "H."),
                      family = "Lachos",
                      role = "aut",
                      email = "hlachos@ime.unicamp.br"),
               person(given = c("Eraldo", "B.", "Anjos"),
                      family = "Filho",
                      role = "aut",
                      email = "ebdaf1@de.ufpe.br"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
plot.bayes_ctd_array 3.286   0.05   5.397
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
B_WP.IDX    9.601  0.039  13.049
B_GC.IDX    9.531  0.056  12.064
plot_BCVI   8.780  0.000  12.580
B_CCV.IDX   8.153  0.122  10.616
B_WL.IDX    8.052  0.004  11.626
B_KPBM.IDX  7.986  0.020  10.898
B_KWON.IDX  7.965  0.016   9.887
B_KWON2.IDX 7.974  0.004   8.886
B_XB.IDX    7.966  0.004  10.080
B_TANG.IDX  7.849  0.036  10.086
B_HF.IDX    7.680  0.020  10.962
B_PBM.IDX   7.690  0.000   9.307
BayesCVIs   4.191  0.004   5.715
Maintainer: ‘Kjetil Halvorsen <kjetil1001@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Compiled", "by", "Kjetil"),
                      family = "Halvorsen",
                      role = "aut"),
               person(given = "Kjetil",
                      family = "Halvorsen",
                      role = "cre",
                      email = "kjetil1001@gmail.com"))
as necessary.
checkRd: (-1) dilution.Rd:13: Escaped LaTeX specials: \$
checkRd: (-1) dilution.Rd:15: Escaped LaTeX specials: \$
checkRd: (-1) dilution.Rd:16: Escaped LaTeX specials: \$
checkRd: (-1) dilution.Rd:17: Escaped LaTeX specials: \$
checkRd: (-1) personality.Rd:15: Escaped LaTeX specials: \$
checkRd: (-1) personality.Rd:16: Escaped LaTeX specials: \$
checkRd: (-1) personality.Rd:17: Escaped LaTeX specials: \$
checkRd: (-1) bayesDccGarch.Rd:91: Lost braces; missing escapes or markup?
    91 | \item{$H_n1 }{ Bayesian prediction of volatilities and co-volatilities for y_{n+1}.}
       |                                                                              ^
checkRd: (-1) bayesDccGarch.Rd:92: Lost braces; missing escapes or markup?
    92 | \item{$R_n1 }{ Bayesian prediction of coditional correlation for y_{n+1}.}
       |                                                                    ^
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
find_regimes  5.815  0.050   9.265
plot_loadings 4.327  0.032   6.756
find_swans    2.976  0.007   5.109
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
hgp 3.376  0.351   5.618
bmn 3.532  0.127   5.443
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
par_distreg 0.039  0.007   7.666
Maintainer: ‘Carlos Pérez <caaperezag@unal.edu.co>’

The Description field contains
  Cardona-Jiménez (2021) <arXiv:2111.01318>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) GroupSingleVoxelFETS.Rd:53: Lost braces
    53 | online trajectories related to the state parameter, the simulated BOLD responses, \mjseqn{\hat{Y}}{ascii}.
       |                                                                                                   ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bayes_colors.R’ ‘bayes_label.R’
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
build_spec_coveff 3.485  0.414   5.929
Maintainer: ‘Jaejoon Song <jaejoonsong@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jaejoon",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "jaejoonsong@gmail.com"),
               person(given = "Satoshi",
                      family = "Morita",
                      role = "aut"),
               person(given = c("J.", "Jack"),
                      family = "Lee",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
BayesFBHborrow         9.289  0.226  11.624
BayesFBHborrow.WBorrow 9.136  0.098  12.250
plot.BayesFBHborrow    7.667  0.039  10.100
coef.BayesFBHborrow    3.991  0.008   5.162
summary.BayesFBHborrow 3.920  0.047   5.154
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
summary.befa       6.716  0.012   7.408
plot.befa          6.221  0.040   7.455
befa               4.937  0.090   7.704
post.sign.switch   4.908  0.000   5.620
post.column.switch 4.811  0.016   6.504
Maintainer: ‘Asael Alonzo Matamoros <asael.alonzo@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Holt.Rd: auto.arima
  Hw.Rd: auto.arima
  LocalLevel.Rd: auto.arima
  autoplot.ts.Rd: geom_forecast, fortify
  forecast.varstan.Rd: forecast.ts, ets, stlf
  fourier.Rd: seasonaldummy
  garch.Rd: auto.arima
  loo.varstan.Rd: psis, pareto-k-diagnostic, loo_compare
  ssm.Rd: auto.arima
  stan_Holt.Rd: auto.arima
  stan_Hw.Rd: auto.arima
  stan_LocalLevel.Rd: auto.arima
  stan_garch.Rd: auto.arima
  stan_ssm.Rd: auto.arima
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘David Ardia <david.ardia.ch@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bayesGARCH 3.84  0.039   5.592
Maintainer: ‘Doug Fletcher <tug25070@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Subhadeep",
                      family = "Mukhopadhyay",
                      role = "aut"),
               person(given = "Douglas",
                      family = "Fletcher",
                      role = "aut"),
               person(given = "Doug",
                      family = "Fletcher",
                      role = "cre",
                      email = "tug25070@temple.edu"))
as necessary.
checkRd: (-1) gMLE.bb.Rd:18: Lost braces
    18 |   \item{optim.method}{optimization method in \code{optim()}{stats}.}
       |                                                            ^
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
DS.posterior.reduce 7.032  0.005   8.421
DS.prior            4.647  0.008   7.148
DS.entropy          4.164  0.081   6.535
Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
Maintainer: ‘Gordon J. Ross <gordon@gordonjross.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Gordon", "J."),
                    family = "Ross",
                    role = c("aut", "cre"),
                    email = "gordon@gordonjross.co.uk")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
continuous_ss_sdf    8.227  0.015  11.350
BayesianFM           7.349  0.083  12.689
dirac_ss_sdf_pvalue  7.404  0.021  11.307
BayesianSDF          5.655  0.027   8.362
continuous_ss_sdf_v2 3.570  0.063   5.529
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
assessDesign   9.672  0.231  14.251
plot.modelFits 4.124  0.126   6.134
checkRd: (-1) bma.bx.cy.Rd:69: Lost braces
    69 | the initial values for parameters in models. For example, inits<-function(){list(alpha=0,beta=0,c=0,var1=0.5,r=1,lamda=0.01)}.
       |                                                                            ^
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
GP.optim 3.371  0.817   6.577
Maintainer: ‘Fayette Klaassen <klaassen.fayette@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Fayette",
                    family = "Klaassen",
                    role = c("aut", "cre"),
                    email = "klaassen.fayette@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot_cutoff.R’
checkRd: (-1) DE.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DE.Rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DE.Rd:45: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DE.Rd:46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DEzs.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DEzs.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DEzs.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) DEzs.Rd:61: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
marginalLikelihood 5.433   0.33   8.622
Maintainer: ‘Margarita Marin <mmarinj@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Margarita",
                      family = "Marin",
                      role = c("aut", "cre"),
                      email = "mmarinj@unal.edu.co"),
               person(given = "Edilberto",
                      family = "Cepeda-Cuervo.",
                      role = "aut"))
as necessary.
Maintainer: ‘Matt Moores <mmoores@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Arthur White <arwhite@tcd.ie>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jingyu He <jingyuhe@cityu.edu.hk>’

The Description field contains
  priors, Hahn, He and Lopes (2018) <arXiv:1806.05738>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) predict.bayeslm.fit.Rd:18: Lost braces; missing escapes or markup?
    18 |   \item{X         }{ If call \code{bayeslm} with matrices input \code{x} and {y} but not formula, pass new matrix to predict here. See example for details.}
       |                                                                              ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  hs_gibbs.Rd: summary.mcmc
  summary.bayeslm.fit.Rd: summary.mcmc
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  LN_hierarchical.Rd: lmer, mcmc
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
LN_MeanReg 4.806  0.006   6.485
Maintainer: ‘Jesse Windle <jesse.windle@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Edwin Javier Castillo Carreño <edjcastilloca@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Edwin", "Javier", "Castillo"),
                      family = "Carreño",
                      role = c("aut", "cre"),
                      email = "edjcastilloca@unal.edu.co"),
               person(given = c("Edilberto", "Cepeda"),
                      family = "Cuervo",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
mharma11 4.074  0.005    5.04
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
plot_top_k               6.832  0.063   7.948
compute_mallows          6.649  0.173   8.944
predict_top_k            6.595  0.071   7.901
compute_mallows_mixtures 5.950  0.027   8.407
plot_elbow               5.696  0.004   6.566
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  convolve.Rd: funnel
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
mig.predict 3.431  0.296   5.017
Maintainer: ‘Luiz Fernando Figueiredo <labmapackage@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Laboratorio", "de", "Matematica"),
                      family = "Aplicada",
                      role = "aut",
                      comment = "IM/UFRJ"),
               person(given = c("Luiz", "Fernando"),
                      family = "Figueiredo",
                      role = "cre",
                      email = "labmapackage@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
plot.HP 4.157  0.007    5.66
Maintainer: ‘Joshua Cullen <joshcullen10@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) insert_NAs.Rd:22: Lost braces; missing escapes or markup?
    22 | A data frame where new rows have been inserted to regularize the \code{date} column. This results in values provided for \code{id}, \code{date}, and {dt} while inserting NAs for all other columns. Additionally, observations with duplicate date-times are removed.
       |                                                                                                                                                      ^
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
insert_NAs 5.865   0.07   8.127
Maintainer: ‘Peter Rossi <perossichi@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Rossi",
                    role = c("aut", "cre"),
                    email = "perossichi@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
bayes_mode 5.524  0.084   7.607
Maintainer: ‘Erik Thorsén <erik.thorsen@math.su.se>’

The Description field contains
  (<arXiv:2104.02105>). The Metropolis-Hastings algorithm is designed
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
amend 8.304  0.272   10.58
Maintainer: ‘Han Yu <hyu9@buffalo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Han",
                      family = "Yu",
                      role = c("aut", "cre"),
                      email = "hyu9@buffalo.edu"),
               person(given = "Rachael",
                      family = "Blair",
                      role = "aut"),
               person(given = "Janhavi",
                      family = "Moharil",
                      role = "aut"),
               person(given = "Andrew",
                      family = "Yan",
                      role = "aut"))
as necessary.
Maintainer: ‘Daniel Turek <danielturek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daniel",
                      family = "Turek",
                      role = c("aut", "cre"),
                      email = "danielturek@gmail.com"),
               person(given = "Mark",
                      family = "Risser",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:1702.00434v2>). Bayesian inference is carried out using Markov
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
nsgpModel 4.506  0.377   5.729
Maintainer: ‘Chengxue Zhong <czhong9106@gmail.com>’

The Description field contains
  (2021) <arXiv:2108.06568>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
ss_npo     5.229  0.044   8.423
get_oc_NPO 4.946  0.093   6.603
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘helper_functions.R’
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
visual_compare 5.904  0.149   8.652
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
bayesplot-colors    7.577  0.012  12.205
MCMC-traces         6.627  0.037   8.493
PPC-test-statistics 6.637  0.004   9.249
PPD-intervals       6.188  0.004  10.118
MCMC-intervals      5.660  0.004   7.361
PPC-intervals       5.303  0.000   7.093
bayesplot_theme_get 5.022  0.000   5.341
bayesplot-helpers   4.961  0.024   6.357
MCMC-combos         4.361  0.107   5.181
MCMC-distributions  3.998  0.039   5.719
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
binom_PRC_h 9.556  0.125  12.607
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
power.phm.random.a0    6.677  0.019   8.875
power.phm.fixed.a0     5.669  0.000   7.810
phm.random.a0          5.637  0.027   8.349
approximate.prior.beta 4.634  0.061   5.439
Maintainer: ‘Georg Hahn <ghahn@hsph.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Georg",
                      family = "Hahn",
                      role = c("aut", "cre"),
                      email = "ghahn@hsph.harvard.edu"),
               person(given = "Paul",
                      family = "Fearnhead",
                      role = "ctb"),
               person(given = c("Idris", "A."),
                      family = "Eckley",
                      role = "ctb"))
as necessary.
Maintainer: ‘Dries F. Benoit <Dries.Benoit@UGent.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Dries", "F."),
                      family = "Benoit",
                      role = c("aut", "cre"),
                      email = "dries.benoit@ugent.be"),
               person(given = "Rahim",
                      family = "Al-Hamzawi",
                      role = "aut"),
               person(given = "Keming",
                      family = "Yu",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
reconc_MCMC 5.621  0.091   7.886
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
predict.bayesreg 1.504  0.217   6.140
bayesreg         0.602  0.054   6.932
Maintainer: ‘Andrew G Chapple <achapp@lsuhsc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Andrew", "G"),
                    family = "Chapple",
                    role = c("aut", "cre"),
                    email = "achapp@lsuhsc.edu")
as necessary.
Specified C++11: please drop specification unless essential
Specified C++11: please drop specification unless essential
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) pulse_of_the_nation.Rd:10: Escaped LaTeX specials: \$
Maintainer: ‘Minsuk Shin <minsuk000@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Minsuk",
                      family = "Shin",
                      role = c("aut", "cre"),
                      email = "minsuk000@gmail.com"),
               person(given = "Ruoxuan",
                      family = "Tian",
                      role = "aut"))
as necessary.
Maintainer: ‘Jinhui Yang <james.yangjinhui@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jinhui",
                      family = "Yang",
                      role = c("aut", "cre"),
                      email = "james.yangjinhui@gmail.com"),
               person(given = "Haitao",
                      family = "Chu",
                      role = "aut"),
               person(given = "Lifeng",
                      family = "Lin",
                      role = "aut"))
as necessary.
Maintainer: ‘Jean-Michel Marin <jean-michel.marin@umontpellier.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean-Michel",
                      family = "Marin",
                      role = c("aut", "cre"),
                      email = "jean-michel.marin@umontpellier.fr"),
               person(given = c("Christian", "P."),
                      family = "Robert",
                      role = "aut"))
as necessary.
'library' or 'require' call not declared from: ‘mvtnorm’
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
pmmh 10.371   0.16  14.326
Maintainer: ‘Stephanie van der Pas <s.l.vanderpas@amsterdamumc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stephanie",
                      family = "van der Pas",
                      role = c("aut", "cre"),
                      email = "s.l.vanderpas@amsterdamumc.nl"),
               person(given = "Ismael",
                      family = "Castillo",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:2005.02889>. In that paper it is also shown that the credible
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
BayesSurv     4.810  0.206   6.080
PlotBayesSurv 4.107  0.060   6.838
SurvEval      3.162  0.044   5.658
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
bayesfactor 9.839  0.584  13.613
Maintainer: ‘Riko Kelter <riko.kelter@uni-siegen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Riko",
                    family = "Kelter",
                    role = c("aut", "cre"),
                    email = "riko.kelter@uni-siegen.de")
as necessary.

The Description field contains
  details about the Gibbs sampler see Kelter (2019) <arXiv:1906.07524>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
bayes.t.test 4.223  0.336   6.166
Maintainer: ‘Alexia Jolicoeur-Martineau <alexia.jolicoeur-martineau@mail.mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexia",
                    family = "Jolicoeur-Martineau",
                    role = c("aut", "cre"),
                    email = "alexia.jolicoeur-martineau@mail.mcgill.ca")
as necessary.
checkRd: (-1) BayesTreePrior.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BayesTreePrior.Rd:39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BayesTreePrior.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) BayesTreePrior.Rd:41: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
BayesTreePriorNotOrthogonal 6.454  0.000   6.936
BayesTreePrior              4.781  0.011   5.940
Maintainer: ‘Robert McCulloch <robert.e.mcculloch@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hugh",
                      family = "Chipman",
                      role = "aut",
                      email = "hugh.chipman@gmail.com"),
               person(given = "Robert",
                      family = "McCulloch",
                      role = c("aut", "cre"),
                      email = "robert.e.mcculloch@gmail.com"))
as necessary.
Maintainer: ‘Inga Schwabe <bayestwin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Inga",
                    family = "Schwabe",
                    role = c("aut", "cre"),
                    email = "bayestwin@gmail.com")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/ingaschwabe/BayesTwin
which should likely be
  https://github.com/ingaschwabe/BayesTwin/issues
instead.
Maintainer: ‘Viet-Phuong La <lvphuong@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘graphs.Rd’:
    \keyword{directed acyclic graphs, bayesvl}
  File ‘plots.Rd’:
    \keyword{directed acyclic graphs, bayesvl, bayesvl [TRUNCATED]
  File ‘stan.Rd’:
    \keyword{directed acyclic graphs, bayesvl}
  File ‘vl2bn.Rd’:
    \keyword{directed acyclic graphs, bayesvl, bayesvl [TRUNCATED]
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  stan.Rd: stan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Alexander C. Murph <murph290@gmail.com>’

The Description field contains
  al. (2023) <arXiv:2310.02940>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Author field differs from that derived from Authors@R
  Author:    ‘Alexander C. Murph [aut, cre] (<https://orcid.org/0000-0001-7170-867X>), Reza Mohammadi [ctb, cph] (<https://orcid.org/0000-0001-9538-0648>), Alex Lenkoski [ctb, cph] (<https://orcid.org/0000-0002-6664-0292>), Andrew Johnson [ctb] (andrew.johnson@arjohnsonau.com)’
  Authors@R: ‘Alexander C. Murph [aut, cre] (ORCID: <https://orcid.org/0000-0001-7170-867X>), Reza Mohammadi [ctb, cph] (ORCID: <https://orcid.org/0000-0001-9538-0648>), Alex Lenkoski [ctb, cph] (ORCID: <https://orcid.org/0000-0002-6664-0292>), Andrew Johnson [ctb] (email: andrew.johnson@arjohnsonau.com)’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  AgeC14_Computation.Rd: rjags
  AgeS_Computation.Rd: rjags, runjags
  Age_Computation.Rd: jags.model, rjags
  Age_OSLC14.Rd: rjags, runjags
  Generate_DataFile-deprecated.Rd: read_BIN2R, Luminescence
  Generate_DataFile_MG-deprecated.Rd: read_BIN2R
  Model_Age.Rd: rjags
  Model_AgeC14.Rd: rjags
  Model_AgeS.Rd: rjags
  Model_Palaeodose.Rd: rjags
  Palaeodose_Computation.Rd: jags.model, rjags
  create_DataFile.Rd: RLum.Analysis-class
  plot_MCMC.Rd: rjags
  plot_Scatterplots.Rd: rjags
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
plotDelDist 4.358  0.169   6.167
plotObj     4.137  0.049   5.708
plotTrace   4.133  0.043   5.563
Maintainer: ‘Edward M.H. Lin <ed.mhlin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Cathy", "W.", "S."),
                      family = "Chen",
                      role = "aut"),
               person(given = c("Edward", "M.H."),
                      family = "Lin",
                      role = c("aut", "cre"),
                      email = "ed.mhlin@gmail.com"),
               person(given = "F.C.",
                      family = "Liu",
                      role = "aut"),
               person(given = "Richard",
                      family = "Gerlach",
                      role = "aut"))
as necessary.
Maintainer: ‘Erik W Leppo <Erik.Leppo@tetratech.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rebecca",
                      family = "Murphy",
                      role = "aut"),
               person(given = "Elgin",
                      family = "Perry",
                      role = "aut"),
               person(given = "Jennifer",
                      family = "Keisman",
                      role = "aut"),
               person(given = "Jon",
                      family = "Harcum",
                      role = "aut"),
               person(given = c("Erik", "W"),
                      family = "Leppo",
                      role = c("aut", "cre"),
                      email = "erik.leppo@tetratech.com"))
as necessary.
Maintainer: ‘Valeriy Zakamulin <valeriz@uia.no>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Valeriy",
                    family = "Zakamulin",
                    role = c("aut", "cre"),
                    email = "valeriz@uia.no")
as necessary.
Maintainer: ‘Anton Gagin <av.gagin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Anton",
                      family = "Gagin",
                      role = c("aut", "cre"),
                      email = "av.gagin@gmail.com"),
               person(given = c("Igor", "Levin", "with", "contributions", "from", "Charles", "R.", "Hogg"),
                      family = "III",
                      role = "aut"))
as necessary.
checkRd: (-1) runUI.Rd:11: Lost braces
    11 | Runs a \bold{Shiny} application. This function normally does not return; interrupt bold{R} to stop the application (usually by pressing Ctrl+C or Esc).
       |                                                                                        ^
checkRd: (-1) getOperatingSystem.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getOperatingSystem.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getOperatingSystem.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getOperatingSystem.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getOperatingSystem.Rd:30: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
bbn.sensitivity 5.073  0.013   5.826
bbn.predict     5.008  0.016   5.332
bbn.timeseries  3.738  0.157   5.211
Maintainer: ‘Paul Gilbert <pgilbert.ttv9z@ncf.ca>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Vinicius Mayrink <vdinizm@gmail.com>’

The Description field contains
  <arXiv:2003.05157>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘boot_bw.R’ ‘boot_bw_estimate.R’ ‘post_strat_estimation.R’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
boot_bw_estimate 0.264  0.016   5.225
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  c3mtc.Rd: c3
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Wang Yudong <yudongw@u.nus.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wang",
                      family = "Yudong",
                      role = c("aut", "cre"),
                      email = "yudongw@u.nus.edu"),
               person(given = "Ye",
                      family = "Zhisheng",
                      role = "aut"),
               person(given = "Cao",
                      family = "Hongyuan",
                      role = "aut"))
as necessary.
Maintainer: ‘Longhai Li <longhai@math.usask.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Longhai",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "longhai@math.usask.ca")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
example 8.64  0.025  13.443
Found the following files/directories:
  ‘.fitbcbcsf_alpha1_mu_3_n_31_p_4026_nfsel_20_biascor_1.RData’
  ‘.fitbcbcsf_alpha1_mu_3_n_31_p_4026_nfsel_50_biascor_1.RData’
  ‘.fitbcbcsf_alpha1_mu_3_n_53_p_4026_nfsel_20_biascor_1.RData’
  ‘.fitbcbcsf_alpha1_mu_3_n_53_p_4026_nfsel_50_biascor_1.RData’
Maintainer: ‘Haoran Zhang <hzz0017@auburn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haoran",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "hzz0017@auburn.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
BayesT    8.082  0.276  10.747
plot.BCC  7.129  0.045   7.990
BCC.multi 4.629  0.260   5.777
Maintainer: ‘Mahdi Teimouri <teimouri@aut.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mahdi",
                    family = "Teimouri",
                    role = c("aut", "cre"),
                    email = "teimouri@aut.ac.ir")
as necessary.
checkRd: (-1) goftype1.Rd:4: Lost braces
     4 | \description{The goodness-of-fit (GOF) measures consist of Anderson-Darling (\code{AD}) and Cram\'{e}er-von Misses (\code{CVM}) statistics for progressive type-I interval censoring scheme are given, respectively, by
       |                                                                                                   ^
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
get_diagnostics 4.232  0.059   6.137
Maintainer: ‘Ewoud De Troyer <ewoud.detroyer@uhasselt.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Aregay",
                      family = "Mengsteab",
                      role = "aut"),
               person(given = "Martin",
                      family = "Otava",
                      role = "aut"),
               person(given = "Tatsiana",
                      family = "Khamiakova",
                      role = "aut"),
               person(given = "Ewoud",
                      family = "De Troyer",
                      role = c("aut", "cre"),
                      email = "ewoud.detroyer@uhasselt.be"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
writeBic      4.561  0.021   7.073
anomedOnlybic 3.692  0.278   6.133
Found the following files/directories:
  ‘fabiabreast.txt’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ceac_plot_graph.R’ ‘ceef_plot_graph.R’ ‘ceplane_plot_graph.R’
    ‘contour_graph.R’ ‘eib_plot_graph.R’ ‘evppi.default.R’
    ‘evppi_plot_ggplot.R’ ‘info_rank_graph.R’ ‘plot.bcea.R’
    ‘prep_ceplane_params.R’
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
ceplane_plot_graph 5.633  0.032   8.038
ceac.plot          4.533  0.313   6.625
multi.ce           4.705  0.011   5.591
plot.bcea          4.617  0.019   5.368
summary.pairwise   4.473  0.008   5.521
eib.plot           3.667  0.019   5.190
evppi              3.624  0.020   5.117
Maintainer: ‘Denis Talbot <denis.talbot@fmed.ulaval.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Denis",
                      family = "Talbot",
                      role = c("aut", "cre"),
                      email = "denis.talbot@fmed.ulaval.ca"),
               person(given = "Genevieve",
                      family = "Lefebvre",
                      role = "aut"),
               person(given = "Juli",
                      family = "Atherton",
                      role = "aut"),
               person(given = "Yohann",
                      family = "Chiu.",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bcfraildv.Rd: bcfrailph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
bcfraildv       3.922  0.296    5.20
print.bcfraildv 3.715  0.007    5.91
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  shrgamsp.Rd: coxph
  simstdybcf.Rd: coxph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
shrgamsp 5.43      0   7.563
Maintainer: ‘Jared S. Murray <jared.murray@mccombs.utexas.edu>’

The Description field contains
  <arXiv:1309.1906>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Nicola Lunardon <nicola.lunardon@unimib.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nicola",
                      family = "Lunardon",
                      role = c("aut", "cre"),
                      email = "nicola.lunardon@unimib.it"),
               person(given = "Daniel",
                      family = "Scharfstein",
                      role = "aut",
                      email = "dscharf@jhu.edu"))
as necessary.
Maintainer: ‘J. Jack Lee <jjlee@mdanderson.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nan",
                      family = "Chen",
                      role = "aut"),
               person(given = c("J.", "Jack"),
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "jjlee@mdanderson.org"))
as necessary.
Maintainer: ‘Jiehuan Sun <jiehuan.sun@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiehuan",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "jiehuan.sun@gmail.com"),
               person(given = c("Jose", "D."),
                      family = "Herazo-Maya",
                      role = "aut"),
               person(given = "Naftali",
                      family = "Kaminski",
                      role = "aut"),
               person(given = "Hongyu",
                      family = "Zhao",
                      role = "aut"),
               person(given = c("Joshua", "L."),
                      family = "Warren,",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
bcmmrm         4.591  0.004   5.242
boxplot.bcmmrm 4.266  0.012   5.299
plot.bcmmrm    4.096  0.012   6.042
summary.bcmmrm 4.000  0.003   5.207
Maintainer: ‘Eliezer Gurarie <egurarie@esf.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Eliezer",
                    family = "Gurarie",
                    role = c("aut", "cre"),
                    email = "egurarie@esf.edu")
as necessary.
checkRd: (-1) WindowSweep.Rd:32: Lost braces
    32 | `code{\link{GetVT}}`.   Otherwise, any column (e.g. \code{"Depth"}) in the 
       |      ^
checkRd: (-1) WindowSweep.Rd:36: Lost braces
    36 | \code{T.mid}  from the output of the `code{\link{GetVT}}`.}
       |                                           ^
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
WindowSweep 3.972  0.005    5.73
Maintainer: ‘Fanni Zhang <rstatpackages@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Fanni",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "rstatpackages@gmail.com")
as necessary.
Maintainer: ‘Duc-Khanh To  <toduc@stat.unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Duc-Khanh",
                      family = "To",
                      role = c("aut", "cre"),
                      email = "toduc@stat.unipd.it"),
               person(given = c("with", "contributions", "from", "Monica"),
                      family = "Chiogna",
                      role = "aut"),
               person(given = "Gianfranco",
                      family = "Adimari",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
asy_var_vus 5.054      0   6.713
Maintainer: ‘Jiehuan Sun <jiehuan.sun@yale.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiehuan",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "jiehuan.sun@yale.edu"),
               person(given = c("Joshua", "L."),
                      family = "Warren",
                      role = "aut"),
               person(given = "Hongyu",
                      family = "Zhao",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
BCSub 7.106  0.129   9.672
Maintainer: ‘Valentinian Mihai Lungu <valentinian.mihai@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ioannis",
                      family = "Papageorgiou",
                      role = "aut"),
               person(given = c("Valentinian", "Mihai"),
                      family = "Lungu",
                      role = c("aut", "cre"),
                      email = "valentinian.mihai@gmail.com"),
               person(given = "Ioannis",
                      family = "Kontoyiannis",
                      role = "aut"))
as necessary.

The Description field contains
  April 2022. Available at: <arXiv:2007.14900> [stat.ME], July 2020] and
  using Bayesian Context Trees' <arXiv:2203.04341> [stat.ME], March
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) gene_s.Rd:17: Lost braces; missing escapes or markup?
    17 | giving the virus access to the cell and thus facilitating the COVID-19 disease. The gene sequence is mapped to the alphabet {0,1,2,3} via the obvious map A->0, C->1, G->2, T->3.
       |                                                                                                                             ^
checkRd: (-1) sars_cov_2.Rd:16: Lost braces; missing escapes or markup?
    16 | It consists of n = 29903 base pairs. The gene sequence is mapped to the alphabet {0,1,2,3} via the obvious map A->0, C->1, G->2, T->3.
       |                                                                                  ^
Maintainer: ‘Michal Burdukiewicz <michalburdukiewicz@gmail.com>’

The Description field contains
  article (at <arXiv:0908.2062>) and Perry's 2009 PhD thesis (at
  <arXiv:0909.3052>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Guzman Santafe <guzman.santafe@unavarra.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guzman",
                      family = "Santafe",
                      role = c("aut", "cre"),
                      email = "guzman.santafe@unavarra.es"),
               person(given = "Borja",
                      family = "Calvo",
                      role = "aut"),
               person(given = "Aritz",
                      family = "Perez",
                      role = "aut"),
               person(given = c("Jose", "A."),
                      family = "Lozano",
                      role = "aut"))
as necessary.
checkRd: (-1) bde.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) bde.Rd:56: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Collin Nolte <collin-nolte@uiowa.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Collin",
                      family = "Nolte",
                      role = c("aut", "cre"),
                      email = "collin-nolte@uiowa.edu"),
               person(given = "Michael",
                      family = "Seedorff",
                      role = "aut"),
               person(given = "Jacob",
                      family = "Oleson",
                      role = "aut"),
               person(given = "Grant",
                      family = "Brown",
                      role = "aut"),
               person(given = "Joseph",
                      family = "Cavanaugh",
                      role = "aut"),
               person(given = "Bob",
                      family = "McMurray",
                      role = "aut"))
as necessary.
Maintainer: ‘Manuel Wiesenfarth <m.wiesenfarth@dkfz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Annette",
                      family = "Kopp-Schneider",
                      role = "aut"),
               person(given = "Manuel",
                      family = "Wiesenfarth",
                      role = c("aut", "cre"),
                      email = "m.wiesenfarth@dkfz.de"),
               person(given = "Ulrich",
                      family = "Abel",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Frank Schaarschmidt <schaarschmidt@biostat.uni-hannover.de>’

File 'R/bdpv-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Solvi Rognvaldsson <solviro@gmail.com>’

The Description field contains
  described in Hrafnkelsson et al. (2020) <arXiv:2010.04769>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following files/directories:
  ‘dump.txt’
Maintainer: ‘Terry Therneau <therneau.terry@mayo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Terry",
                    family = "Therneau",
                    role = c("aut", "cre"),
                    email = "therneau.terry@mayo.edu")
as necessary.
Maintainer: ‘Hamed Haselimashhadi <hamedhaseli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hamed",
                    family = "Haselimashhadi",
                    role = c("aut", "cre"),
                    email = "hamedhaseli@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
cluster_events 3.029  0.277   5.217
Maintainer: ‘Peter Kampstra <beanplot@kampstra.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Kampstra",
                    role = c("aut", "cre"),
                    email = "beanplot@kampstra.net")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Chenguang Wang <cwang68@jhmi.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chenguang",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "cwang68@jhmi.edu"),
               person(given = "Ravi",
                      family = "Varadhan",
                      role = "aut"),
               person(given = c("Trustees", "of", "Columbia"),
                      family = "University",
                      role = "cph",
                      comment = "tools/make_cpp.R, R/stanmodels.R"))
as necessary.
Maintainer: ‘Panagiotis Papastamoulis <papapast@yahoo.gr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Panagiotis",
                    family = "Papastamoulis",
                    role = c("aut", "cre"),
                    email = "papapast@yahoo.gr")
as necessary.

The Description field contains
  Papastamoulis et al (2017) <arXiv:1709.06111> for a detailed
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following files/directories:
  ‘beast_plot_toy.pdf’
Maintainer: ‘Gideon Bradburd <bradburd@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gideon",
                    family = "Bradburd",
                    role = c("aut", "cre"),
                    email = "bradburd@umich.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘BeeBDCQuery.Rd’ ‘continentOutlieRs.Rd’ ‘countryOutlieRs.Rd’
    ‘harmoniseR.Rd’
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
jbd_Ctrans_chunker 5.013  0.644   6.725
continentOutlieRs  4.847  0.104   6.513
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘apply_contrast.R’ ‘apply_contrast.Rd’ ‘average_predictions.Rd’
    ‘estimate_varcov.R’ ‘estimate_varcov.Rd’ ‘get_marginal_effect.R’
    ‘get_marginal_effect.Rd’ ‘predict_counterfactuals.R’
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
ppc.beeSurvValidation 12.979  0.105  16.356
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘fitting.R’
Maintainer: ‘Peter Thuresson <jpeter.thuresson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Thuresson",
                    role = c("aut", "cre"),
                    email = "jpeter.thuresson@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CIBER.Rd: ggplot2, biAxisDiamondPlot, diamondPlot, gtable
  determinantStructure.Rd: data.tree
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
toy_activity_data 8.203  0.532   4.347
bin_apply         5.578  0.730   3.463
Maintainer: ‘Jakub Nowosad <nowosad.jakub@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Maintainer: ‘Valentin Thorey <valentin@dreem.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dylan",
                      family = "Heirstraeten",
                      role = "aut"),
               person(given = "Valentin",
                      family = "Thorey",
                      role = "cre",
                      email = "valentin@dreem.com"))
as necessary.
Maintainer: ‘Carlos Cinelli <carloscinelli@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carlos",
                    family = "Cinelli",
                    role = c("aut", "cre"),
                    email = "carloscinelli@hotmail.com")
as necessary.
Maintainer: ‘Vitor Hugo Moreau <vitorhmc@ufba.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Vitor", "Hugo"),
                    family = "Moreau",
                    role = c("aut", "cre"),
                    email = "vitorhmc@ufba.br")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  generate_model_data.Rd: tibble
  kit_summary_table.Rd: stanfit
  plot_kit_use.Rd: stanfit, ggplot2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Grace Chiu <bentcable@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Grace",
                      family = "Chiu",
                      role = c("aut", "cre"),
                      email = "bentcable@gmail.com"),
               person(given = c("Virginia", "Institute", "of", "Marine"),
                      family = "Science",
                      role = "aut"),
               person(given = c("William", "&", "Mary", "PO", "Box"),
                      family = "1346",
                      role = "aut"),
               person(given = "Gloucester",
                      family = "Point",
                      role = "aut"),
               person(given = "VA",
                      family = "23062",
                      role = "aut"),
               person(family = "USA",
                      role = "aut"))
as necessary.
checkRd: (-1) sockeye.Rd:13-14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) sockeye.Rd:15-16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) stagnant.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) stagnant.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hill.Rd:39: Lost braces; missing escapes or markup?
    39 | \code{a} in {0, 1, 2} (see details))}
       |             ^
checkRd: (-1) read_ambi.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_ambi.Rd:23-24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_iti.Rd:39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_iti.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_iti.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_iti.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_taxa.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_taxa.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_taxa.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_taxa.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_twn.Rd:36: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_twn.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_twn.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_twn.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_twn.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_twn.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_twn.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Kyun-Seop Bae <k@acr.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kyun-Seop",
                    family = "Bae",
                    role = c("aut", "cre"),
                    email = "k@acr.kr")
as necessary.
Maintainer: ‘Alberto Caimo <alberto.caimo1@ucd.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alberto",
                      family = "Caimo",
                      role = c("aut", "cre"),
                      email = "alberto.caimo1@ucd.ie"),
               person(given = "Lampros",
                      family = "Bouranis",
                      role = "aut"),
               person(given = "Robert",
                      family = "Krause",
                      role = "ctb"))
as necessary.
Maintainer: ‘Berry Boessenkool <berry-b@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Berry",
                    family = "Boessenkool",
                    role = c("aut", "cre"),
                    email = "berry-b@gmx.de")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/brry/berryFunctions
which should likely be
  https://github.com/brry/berryFunctions/issues
instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  l2array.Rd: abind
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bes_g_gao 8.306   0.07  11.384
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
besselJs 4.099  0.012   5.501
besselIs 3.972  0.024   5.302
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
bess 5.987  0.188   7.292
Maintainer: ‘Yuanhao Lai <ylai72@uwo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "A.I.",
                      family = "McLeod",
                      role = "aut"),
               person(given = "Changjiang",
                      family = "Xu",
                      role = "aut"),
               person(given = "Yuanhao",
                      family = "Lai",
                      role = c("aut", "cre"),
                      email = "ylai72@uwo.ca"))
as necessary.
Maintainer: ‘Jack Kuipers <jack.kuipers@bsse.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jack",
                      family = "Kuipers",
                      role = c("aut", "cre"),
                      email = "jack.kuipers@bsse.ethz.ch"),
               person(given = "Giusi",
                      family = "Moffa",
                      role = "aut"))
as necessary.
Maintainer: ‘Beaulac Cedric <cedric@utstat.toronto.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  Rosentahl (2019) <arXiv:1804.10168>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
VI         7.465  0.008   9.205
BaggedBEST 7.439  0.009   9.228
FPredict   7.289  0.004   8.090
BESTForest 4.531  0.003   5.745
Specified C++11: please drop specification unless essential
checkRd: (-1) gen.data.Rd:42: Lost braces
    42 | code{cortype = 2} denotes the constant structure, where the \eqn{(i,j)} entry of covariance
       |     ^
Maintainer: ‘Haiming Zhou <haiming2019@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Telmo M Silva Filho <tmfilho@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Telmo", "M", "Silva"),
                      family = "Filho",
                      role = c("aut", "cre"),
                      email = "tmfilho@gmail.com"),
               person(given = "Meelis",
                      family = "Kull",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
beta_kr 1.662  0.066  10.036
Maintainer: ‘Haakon Eidem Haakstad <h.e.haakstad@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Haakon", "Eidem"),
                    family = "Haakstad",
                    role = c("aut", "cre"),
                    email = "h.e.haakstad@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
MCMI 4.091  0.241    6.85
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  functional.betapart.core.Rd: convhulln
  functional.betapart.core.pairwise.Rd: convhulln
  inter_geom.Rd: intersectn
  qhull.opt.Rd: convhulln
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
zdep 4.556  0.008   7.172
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
betapower  7.857  0.264  11.751
samplesize 5.201  0.004   6.873
Maintainer: ‘Luis Cayuela <luis.cayuela@urjc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luis",
                      family = "Cayuela",
                      role = c("aut", "cre"),
                      email = "luis.cayuela@urjc.es"),
               person(given = "Marcelino",
                      family = "de la Cruz",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘adonis_pertables.Rd’:
    http://dx.doi.org/10.1111/j.1600-0587.2009.05899.x
  File ‘cca_pertables.Rd’:
    http://dx.doi.org/10.1111/j.1600-0587.2009.05899.x
  File ‘mantel_pertables.Rd’:
    http://dx.doi.org/10.1111/j.1600-0587.2009.05899.x
  File ‘pertables.Rd’:
    http://dx.doi.org/10.1111/j.1600-0587.2009.05899.x
  File ‘rda_pertables.Rd’:
    http://dx.doi.org/10.1111/j.1600-0587.2009.05899.x
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
pertables 0.018  0.008   9.785
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
betamix       9.923  0.061  13.536
betar_family  9.506  0.162  13.826
plot.betareg  6.316  0.039   7.777
GasolineYield 3.894  0.139   7.861
909c909
< This is mgcv 1.9-3. For overview type 'help("mgcv-package")'.
---
> This is mgcv 1.9-1. For overview type 'help("mgcv-package")'.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
lav_betaselect 7.692  0.023  10.447
lm_betaselect  5.139  0.003   6.896
Maintainer: ‘Michele De Meo <micheledemeo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michele",
                    family = "De Meo",
                    role = c("aut", "cre"),
                    email = "micheledemeo@gmail.com")
as necessary.
Malformed Title field: should not end in a period.
Maintainer: ‘Qingyuan Zhao <qyzhao@statslab.cam.ac.uk>’

The Description field contains
  <arXiv:2004.07743>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) BETSsearch.Rd:56: Lost braces
    56 |        \item{To exclude whole expressions from the search, surround them with code{' '} and insert a \code{~} before each of them.
       |                                                                                   ^
checkRd: (-1) dummy.Rd:23: Lost braces; missing escapes or markup?
    23 | \item{date}{a \code{list}. The periods for which the dummy must be set to one. Periods must be represented as {integer vectors}, as described for \code{start} and \code{end}.}
       |                                                                                                               ^
checkRd: (-1) dummy.Rd:25: Lost braces; missing escapes or markup?
    25 | \item{from}{An \code{integer vector} The starting period of a sequence of perids for which the dummy must be set to one. Periods must be represented as {integer vectors}, as described for \code{start} and \code{end}.}
       |                                                                                                                                                         ^
checkRd: (-1) dummy.Rd:27: Lost braces; missing escapes or markup?
    27 | \item{to}{The ending period of a sequence of perids for which the dummy must be set to one. Periods must be represented as {integer vectors}, as described for \code{start} and \code{end}.}
       |                                                                                                                            ^
Maintainer: ‘Chris Aberson <cla18@humboldt.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chris",
                    family = "Aberson",
                    role = c("aut", "cre"),
                    email = "cla18@humboldt.edu")
as necessary.
Maintainer: ‘Daniel Greene <dg333@cam.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daniel",
                      family = "Greene",
                      role = c("aut", "cre"),
                      email = "dg333@cam.ac.uk"),
               person(given = "Sylvia",
                      family = "Richardson",
                      role = "aut"),
               person(given = "Ernest",
                      family = "Turro",
                      role = "aut"))
as necessary.
Maintainer: ‘Blondeau Da Silva Stephane <Stephane.Blondeau-Da-Silva@ac-limoges.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Blondeau", "Da", "Silva"),
                    family = "Stephane",
                    role = c("aut", "cre"),
                    email = "stephane.blondeau-da-silva@ac-limoges.fr")
as necessary.
Maintainer: ‘Aaron Olsen <aarolsen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "Olsen",
                    role = c("aut", "cre"),
                    email = "aarolsen@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
pointsOnBezier  6.349  0.030   7.406
bezierArcLength 4.710  0.051   6.471
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
bfi            12.089  0.004  15.022
surv.simulate  11.561  0.015  14.045
MAP.estimation  6.961  0.024   9.122
hazards.fun     6.433  0.012   7.561
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bfsMaps-package.Rd’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CombinePolygons.Rd: st_union
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bfs_get_catalog_data.R’ ‘bfs_get_catalog_tables.R’
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
GWAS 5.396  0.072   6.858
Maintainer: ‘Giampiero Marra <giampiero.marra@ucl.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giampiero",
                      family = "Marra",
                      role = c("aut", "cre"),
                      email = "giampiero.marra@ucl.ac.uk"),
               person(given = "Raffaella",
                      family = "Calabrese",
                      role = "aut"),
               person(given = c("Silvia", "Angela"),
                      family = "Osmetti",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Author field differs from that derived from Authors@R
  Author:    ‘S. Mason Garrison [aut, cre] (<https://orcid.org/0000-0002-4804-6003>), Michael D. Hunter [aut] (<https://orcid.org/0000-0002-3651-6709>), Xuanyu Lyu [aut] (<https://orcid.org/0000-0002-2841-5529>), Rachel N. Good [ctb], Jonathan D. Trattner [aut] (<https://orcid.org/0000-0002-1097-7603>, https://www.jdtrat.com/), S. Alexandra Burt [aut] (<https://orcid.org/0000-0001-5538-7431>)’
  Authors@R: ‘S. Mason Garrison [aut, cre] (ORCID: <https://orcid.org/0000-0002-4804-6003>), Michael D. Hunter [aut] (ORCID: <https://orcid.org/0000-0002-3651-6709>), Xuanyu Lyu [aut] (ORCID: <https://orcid.org/0000-0002-2841-5529>), Rachel N. Good [ctb], Jonathan D. Trattner [aut] (ORCID: <https://orcid.org/0000-0002-1097-7603>, url: https://www.jdtrat.com/), S. Alexandra Burt [aut] (ORCID: <https://orcid.org/0000-0001-5538-7431>)’
Maintainer: ‘Przemyslaw Biecek <Przemyslaw.Biecek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Przemyslaw", "Biecek", "\\&", "Ewa"),
                      family = "Szczurek",
                      role = "aut"),
               person(given = "Przemyslaw",
                      family = "Biecek",
                      role = "cre",
                      email = "Przemyslaw.Biecek@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) bgmm-package.Rd:23: Escaped LaTeX specials: \&
Maintainer: ‘Emilio Akira Morones Ishikawa <emiliomorones@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("L.", "E."),
                      family = "Nieto-Barajas",
                      role = "aut"),
               person(given = c("J.", "A.", "Garcia"),
                      family = "Bueno",
                      role = "aut"),
               person(given = c("E.A.", "Morones"),
                      family = "Ishikawa",
                      role = "aut"),
               person(given = "J.",
                      family = "Pliego",
                      role = "aut"),
               person(given = c("Emilio", "Akira", "Morones"),
                      family = "Ishikawa",
                      role = "cre",
                      email = "emiliomorones@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
GaMRes 4.65  0.152   5.766
Maintainer: ‘Yin Song <yinsong@uvic.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yin",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "yinsong@uvic.ca"),
               person(given = "Shufei",
                      family = "Ge",
                      role = "aut"),
               person(given = "Liangliang",
                      family = "Wang",
                      role = "aut"),
               person(given = "Jiguo",
                      family = "Cao",
                      role = "aut"),
               person(given = "Keelin",
                      family = "Greenlaw",
                      role = "aut"),
               person(given = "Mary",
                      family = "Lesperance",
                      role = "aut"),
               person(given = c("Farouk", "S."),
                      family = "Nathoo",
                      role = "aut"))
as necessary.
checkRd: (-1) sp_bgsmtr.Rd:42: Lost braces; missing escapes or markup?
    42 | \item{c.star}{The threshold for computing posterior tail probabilities p_{ij} for Bayesian FDR as defined in Section 3.2 of  Song, Ge et al.(2019). If not specified the default is to set this threshold as the minimum posterior standard deviation, where the minimum is taken over all regression coefficients in the model.}
       |                                                                          ^
Author field differs from that derived from Authors@R
  Author:    ‘Pedro C. Brom [aut, cre, cph] (<https://orcid.org/0000-0002-1288-7695>, http://lattes.cnpq.br/0154064396756002), Cira E. G. Otiniano [aut, cph] (<https://orcid.org/0000-0002-5619-0478>, http://lattes.cnpq.br/0307717595727716), Roberto Vila [aut, cph] (<https://orcid.org/0000-0003-1073-0114>, http://lattes.cnpq.br/4978745622057574), Marcelo B. Pereira [aut, cph] (<https://orcid.org/0000-0002-1182-5193>, https://lattes.cnpq.br/9358366674842900)’
  Authors@R: ‘Pedro C. Brom [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-1288-7695>, Lattes: http://lattes.cnpq.br/0154064396756002), Cira E. G. Otiniano [aut, cph] (ORCID: <https://orcid.org/0000-0002-5619-0478>, Lattes: http://lattes.cnpq.br/0307717595727716), Roberto Vila [aut, cph] (ORCID: <https://orcid.org/0000-0003-1073-0114>, Lattes: http://lattes.cnpq.br/4978745622057574), Marcelo B. Pereira [aut, cph] (ORCID: <https://orcid.org/0000-0002-1182-5193>, Lattes: https://lattes.cnpq.br/9358366674842900)’
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
mlebgumbel 7.109  0.007   8.808
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
bgvar 11.03  0.058  13.522
Maintainer: ‘Kjetil B.Halvorsen <kjetil1001@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ernesto",
                      family = "Barrios",
                      role = "aut"),
               person(given = "Kjetil",
                      family = "B.Halvorsen",
                      role = "cre",
                      email = "kjetil1001@gmail.com"))
as necessary.
checkRd: (-1) dotPlot.Rd:56: Escaped LaTeX specials: \&
Maintainer: ‘Stephan Wojciekowski <stephan.wojciekowski@boehringer-ingelheim.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Agner Fog <agner@agner.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Agner",
                    family = "Fog",
                    role = c("aut", "cre"),
                    email = "agner@agner.org")
as necessary.
Maintainer: ‘De Troyer Ewoud <ewoud.detroyer@uhasselt.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("De", "Troyer"),
                    family = "Ewoud",
                    role = c("aut", "cre"),
                    email = "ewoud.detroyer@uhasselt.be")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
conceptualStructure 4.634  0.108   5.429
Maintainer: ‘Aurélien Goutsmedt <agoutsmedt@hotmail.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  detect_keys.Rd: read_rmd
  doi2bib.Rd: cr_cn
  reflist.Rd: write_rmd, render_rmd
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mahdi Teimouri <teimouri@aut.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mahdi",
                    family = "Teimouri",
                    role = c("aut", "cre"),
                    email = "teimouri@aut.ac.ir")
as necessary.
checkRd: (-1) Jeffreysbs.Rd:17: Escaped LaTeX specials: \&
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
bSCMdeConfoundingGraphFunc 4.107  0.015   5.718
Maintainer: ‘Alexander F. Lapanowski <aflapan@gmail.com>’

The Description field contains
  <arXiv:2005.03858>.  Also includes methods for non-linear discriminant
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
tune_biclustermd 3.142  0.065  10.388
Maintainer: ‘Sebastian Kaiser <dr.sebastian.kaiser@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sebastian",
                      family = "Kaiser",
                      role = c("aut", "cre"),
                      email = "dr.sebastian.kaiser@gmail.com"),
               person(given = "Rodrigo",
                      family = "Santamaria",
                      role = "aut"),
               person(given = "Tatsiana",
                      family = "Khamiakova",
                      role = "aut"),
               person(given = "Martin",
                      family = "Sill",
                      role = "aut"),
               person(given = "Roberto",
                      family = "Theron",
                      role = "aut"),
               person(given = "Luis",
                      family = "Quintales",
                      role = "aut"),
               person(given = "Friedrich",
                      family = "Leisch",
                      role = "aut"),
               person(given = "Ewoud",
                      family = "De Troyer",
                      role = "aut"),
               person(given = "Sami",
                      family = "Leon.",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  diagnosticTest.Rd: additivityTests
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
diagnosticPlot2 5.361  0.071   7.842
diagnosticPlot  5.040  0.118   6.805
diagnoseColRow  5.084  0.048   7.489
diagnosticTest  5.051  0.003   7.149
Maintainer: ‘Polina Suter <polina.suter@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Polina",
                      family = "Suter",
                      role = c("aut", "cre"),
                      email = "polina.suter@gmail.com"),
               person(given = "Jack",
                      family = "Kuipers",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plotpedges 5.202  0.050   6.212
plotdiffs  4.900  0.171   5.669
checkRd: (-1) BiDimRegression.Rd:29: Lost braces; missing escapes or markup?
    29 | \item \code{euclidean.df1, affine.df1} -  degrees of freedom of the nominator used for the F-statistics propagated by Nakaya (1997); df1 = p-2, with p is the number of elements  needed to calculate the referring model: p=4 for the Euclidean and p=6 for the affine geometry {Nakaya, 1997, Table 1}.
       |                                                                                                                                                                                                                                                                                  ^
Specified C++11: please drop specification unless essential
Maintainer: ‘Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "BIFIE",
                      role = "aut"),
               person(given = "Alexander",
                      family = "Robitzsch",
                      role = c("aut", "cre"),
                      email = "robitzsch@ipn.uni-kiel.de"),
               person(given = "Konrad",
                      family = "Oberwimmer",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
bfa_boot2fast_ls 6.228  0.007   7.881
bfa_ls_bc        5.918  0.020   7.340
bfa_ls_bc_ci     5.756  0.000   6.930
bfa_boot2_ls     4.897  0.000   6.350
Maintainer: ‘Wojciech Rosa <w.rosa@pollub.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Wojciech",
                    family = "Rosa",
                    role = c("aut", "cre"),
                    email = "w.rosa@pollub.pl")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
player_profile 6.629  0.004   7.528
Maintainer: ‘Gabriel Martos <gmartos@utdt.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘entropy.fd.Rd’:
    \keyword{rkhs, Entropy}
Maintainer: ‘Steve Mack <Steven.Mack@ucsf.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Derek",
                      family = "Pappas",
                      role = "aut",
                      email = "djpappas75@gmail.com"),
               person(given = "Steve",
                      family = "Mack",
                      role = c("aut", "cre"),
                      email = "Steven.Mack@ucsf.edu"),
               person(given = "Jill",
                      family = "Hollenbach",
                      role = "aut",
                      email = "Jill.Hollenbach@ucsf.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
add_neighbour 8.292  0.163  10.772
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
bigergm 5.41  0.203   3.932
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Lumley",
                    role = c("aut", "cre"),
                    email = "t.lumley@auckland.ac.nz")
as necessary.
Found the following calls to data() loading into the global environment:
File ‘biglm/R/bigglm.R’:
  data(reset = TRUE)
  data(reset = FALSE)
See section ‘Good practice’ in ‘?data’.
Maintainer: ‘Joan Garriga <jgarriga@ceab.csic.es>’

The Description field contains
  F. (2018), <arXiv:1812.09869>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++14: please drop specification unless essential
checkRd: (-1) bdm.ptsne.Rd:47: Lost braces; missing escapes or markup?
    47 | By default the algorithm is structured in \eqn{\sqrt{n}} epochs of \eqn{\sqrt{z}} iterations each, where \var{n} is the dataset size and \var{z} is the thread-size (\eqn{z=n*layers/threads}). The running time of the algorithm is then determined by \eqn{epochs*iters*t_i+ epochs*t_e} where \var{t_{i}} is the running time of a single iteration and \var{t_{e}} is the inter-epoch running time.
       |                                                                                                                                                                                                                                                                                                         ^
checkRd: (-1) bdm.ptsne.Rd:47: Lost braces; missing escapes or markup?
    47 | By default the algorithm is structured in \eqn{\sqrt{n}} epochs of \eqn{\sqrt{z}} iterations each, where \var{n} is the dataset size and \var{z} is the thread-size (\eqn{z=n*layers/threads}). The running time of the algorithm is then determined by \eqn{epochs*iters*t_i+ epochs*t_e} where \var{t_{i}} is the running time of a single iteration and \var{t_{e}} is the inter-epoch running time.
       |                                                                                                                                                                                                                                                                                                                                                                   ^
Maintainer: ‘Ruoqi Yu <ruoqiyu125@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ruoqi",
                    family = "Yu",
                    role = c("aut", "cre"),
                    email = "ruoqiyu125@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
check   4.431  0.259   6.055
nfmatch 3.947  0.118   5.227
Maintainer: ‘Cristian Pachón García <cc.pachon@gmail.com>’

The Description field contains
  proposed by Delicado P. and C. Pachón-García (2021) <arXiv:2007.11919>
  (2021) <arXiv:2007.11919> (original proposal).  - Fast MDS, proposed by
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Lumley",
                    role = c("aut", "cre"),
                    email = "t.lumley@auckland.ac.nz")
as necessary.
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
    30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
       |                                                                                                                                                                                                        ^
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
sparse.matrixfree 4.611  0.248   5.727
Maintainer: ‘Chibisi Chima-Okereke <chibisi@active-analytics.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chibisi",
                    family = "Chima-Okereke",
                    role = c("aut", "cre"),
                    email = "chibisi@active-analytics.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DBI.Rd: DBIObject-class, DBIDriver-class, DBIConnection-class,
    DBIResult-class
  bigquery.Rd: DBIDriver-class, DBIConnection-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
snp_clumping  7.641  0.016  10.357
snp_autoSVD   7.526  0.035  11.158
snp_PRS       3.964  0.060   6.223
bed_randomSVD 3.964  0.030   5.107
snp_pcadapt   2.971  0.681   5.621
Maintainer: ‘Nathaniel E. Helwig <helwig@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nathaniel", "E."),
                    family = "Helwig",
                    role = c("aut", "cre"),
                    email = "helwig@umn.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘bigsplines-package.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘bigssa.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘bigssg.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘bigssp.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘bigtps.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘makessa.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘makessg.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘makessp.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘ordspline.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.bigspline.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.bigssa.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.bigssg.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.bigssp.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.bigtps.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘predict.ordspline.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
  File ‘ssBasis.Rd’:
    http://dx.doi.org/10.3389/fams.2017.00015
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
plot.big_SVD    5.592  0.716   9.384
big_randomSVD   4.806  0.375   7.104
as_scaling_fun  4.803  0.024   7.050
asPlotlyText    3.130  0.871   5.818
big_SVD         2.750  0.776   5.173
predict.big_SVD 2.751  0.692   5.014
Maintainer: ‘Aliasghar Tarkhan <atarkhan@uw.edu>’

The Description field contains
  <arXiv:2003.00116v2>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Michael J. Kane <bigmemoryauthors@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Michael", "J."),
                      family = "Kane",
                      role = c("aut", "cre"),
                      email = "kaneplusplus@gmail.com"),
               person(given = c("John", "W."),
                      family = "Emerson",
                      role = "aut",
                      email = "jayemerson@gmail.com"))
as necessary.
Maintainer: ‘Chenguang Wang <cwang68@jhmi.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chenguang",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "cwang68@jhmi.edu"),
               person(given = "Chiung-Yu",
                      family = "Huang",
                      role = "aut"),
               person(given = "Mei-Cheng",
                      family = "Wang",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) VARXFit.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXFit.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXFit.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXFit.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXFit.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXFit.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXLagCons.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) VARXLagCons.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘M. Helena Goncalves <mhgoncal@ualg.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("M.", "Helena"),
                      family = "Goncalves",
                      role = c("aut", "cre"),
                      email = "mhgoncal@ualg.pt"),
               person(given = c("M.", "Salome"),
                      family = "Cabral",
                      role = "aut"),
               person(given = "Adelchi",
                      family = "Azzalini",
                      role = "aut"),
               person(given = c("apart", "from", "a", "set", "of", "Fortran-77", "subroutines", "written", "by", "R."),
                      family = "Piessens",
                      role = "aut"),
               person(given = "E.",
                      family = "de Doncker",
                      role = "aut"),
               person(given = c("belonging", "to", "the", "suite"),
                      family = "\"Quadpack\".",
                      role = "aut"))
as necessary.
Maintainer: ‘Mikkel Freltoft Krogsholm <mikkel@56n.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mikkel", "Freltoft"),
                    family = "Krogsholm",
                    role = c("aut", "cre"),
                    email = "mikkel@56n.dk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
MDL      6.645  0.004   8.323
ESTIMATE 5.589  0.019   6.357
Maintainer: ‘Hans Kestler <hans.kestler@uni-ulm.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stefan",
                      family = "Mundus",
                      role = "aut"),
               person(given = "Christoph",
                      family = "Müssel",
                      role = "aut"),
               person(given = "Florian",
                      family = "Schmid",
                      role = "aut"),
               person(given = "Ludwig",
                      family = "Lausser",
                      role = "aut"),
               person(given = c("Tamara", "J."),
                      family = "Blätte",
                      role = "aut"),
               person(given = "Martin",
                      family = "Hopfensitz",
                      role = "aut"),
               person(given = c("Hans", "A."),
                      family = "Kestler",
                      role = "aut"),
               person(given = "Hans",
                      family = "Kestler",
                      role = "cre",
                      email = "hans.kestler@uni-ulm.de"))
as necessary.
File ‘Binarize/libs/Binarize.so’:
  Found non-API call to R: ‘SET_TYPEOF’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Navinkumar Nedunchezhian <navinkumar.nedunchezhian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Navinkumar",
                    family = "Nedunchezhian",
                    role = c("aut", "cre"),
                    email = "navinkumar.nedunchezhian@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
BinomialEMVS 13.269  0.626  20.986
Maintainer: ‘Chih-Li Sung <iamdfchile@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chih-Li",
                    family = "Sung",
                    role = c("aut", "cre"),
                    email = "iamdfchile@gmail.com")
as necessary.

The Description field contains
  can be seen in Sung et al (2017) <arXiv:1705.02511>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = c("aut", "cre"),
                      email = "edd@debian.org"),
               person(given = "Ista",
                      family = "Zahn",
                      role = "aut"),
               person(given = "Rob",
                      family = "Hyndman",
                      role = "aut"))
as necessary.
Maintainer: ‘Josué M. Polanco-Martínez <josue.m.polanco@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: josue.m.polanco@gmail.com
    From: man/BINCOR-package.Rd
  URI: josue.m.polanco@gmail.com
    From: man/bin_cor.Rd
  URI: josue.m.polanco@gmail.com
    From: man/ccf_ts.Rd
  URI: josue.m.polanco@gmail.com
    From: man/cor_ts.Rd
  URI: josue.m.polanco@gmail.com
    From: man/plot_ts.Rd
  URI: mvkorpel@iki.fi
    From: man/redfitMinls.Rd
  URI: mvkorpel@iki.fi
    From: man/redfitTauest.Rd
Found the following files/directories:
  ‘ccf_ccf_ID31_ID32_res.jpg’ ‘ccf_ccf_ID31_ID32_res.pdf’
  ‘output_ENSO_NHSST.tmp’ ‘plot_plot_ts_RAW_BIN_enso_sst.pdf’
  ‘plot_plot_ts_RAW_BIN_enso_sst01.png’
  ‘plot_plot_ts_RAW_BIN_enso_sst02.png’
  ‘plot_plot_ts_RAW_BIN_enso_sst03.png’
  ‘plot_plot_ts_RAW_BIN_enso_sst04.png’ ‘plot_ts_ACER_ABRUPT.pdf’
  ‘plot_ts_ACER_ABRUPT01.png’ ‘plot_ts_ACER_ABRUPT02.png’
  ‘plot_ts_ACER_ABRUPT03.png’ ‘plot_ts_ACER_ABRUPT04.png’
  ‘salida_ACER_ABRUPT.tmp’ ‘scaterplot_scatterplot_ENSO_SST.jpg’
  ‘scaterplot_scatterplot_ENSO_SST.pdf’
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sebastian",
                      family = "Gibb",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Maintainer: ‘Samuel V. Scarpino <s.scarpino@northeastern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Samuel", "V."),
                      family = "Scarpino",
                      role = c("aut", "cre"),
                      email = "s.scarpino@northeastern.edu"),
               person(given = "Paul",
                      family = "von Hippel",
                      role = "aut"),
               person(given = "Igor",
                      family = "Holas",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid file URI:
  URI: doi.org/10.1177/0081175015599807
    From: inst/CITATION
Maintainer: ‘Berkley Shands <rpackages@biorankings.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Terrence",
                      family = "Brooks",
                      role = "aut"),
               person(given = "Berkley",
                      family = "Shands",
                      role = c("aut", "cre"),
                      email = "rpackages@biorankings.com"),
               person(given = "Skye",
                      family = "Buckner-Petty",
                      role = "aut"),
               person(given = c("Patricio", "S."),
                      family = "La Rosa",
                      role = "aut"),
               person(given = "Elena",
                      family = "Deych",
                      role = "aut"),
               person(given = c("William", "D."),
                      family = "Shannon",
                      role = "aut"))
as necessary.
Maintainer: ‘Frank Schaarschmidt <schaarschmidt@biostat.uni-hannover.de>’

File 'R/binGroup-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Matt Nunes <nunesrpackages@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matt",
                    family = "Nunes",
                    role = c("aut", "cre"),
                    email = "nunesrpackages@gmail.com")
as necessary.
Maintainer: ‘Clarke van Steenderen <vsteenderen@gmail.com>’

The Description field contains
  <https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/1365-2745.12869>,
Please use permanent DOI markup for linking to publications as in <doi:prefix/suffix>.
Maintainer: ‘Frank Schaarschmidt <schaarschmidt@biostat.uni-hannover.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Frank",
                    family = "Schaarschmidt",
                    role = c("aut", "cre"),
                    email = "schaarschmidt@biostat.uni-hannover.de")
as necessary.
Maintainer: ‘Ran Gao <rgao8@uic.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gul",
                      family = "Inan",
                      role = "aut"),
               person(given = "Hakan",
                      family = "Demirtas",
                      role = "aut"),
               person(given = "Ran",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "rgao8@uic.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
binomialRF 4.579  0.208   6.002
Maintainer: ‘Sundar Dorai-Raj <sdorairaj@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sundar",
                    family = "Dorai-Raj",
                    role = c("aut", "cre"),
                    email = "sundar.dorai-raj@pdf.com")
as necessary.
checkRd: (-1) binom.confint.Rd:28-29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:30-31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:32-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:39-40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) binom.confint.Rd:45: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
binom.bayes 6.804  0.161   8.938
Maintainer: ‘Ran Gao <rgao8@uic.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hakan",
                      family = "Demirtas",
                      role = "aut"),
               person(given = "Yue",
                      family = "Wang",
                      role = "aut"),
               person(given = "Rawan",
                      family = "Allozi",
                      role = "aut"),
               person(given = "Ran",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "rgao8@uic.edu"))
as necessary.
Maintainer: ‘Ping Liu <ping.liu@unimelb.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sergei Izrailev <sizrailev@jabiruventures.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sergei",
                    family = "Izrailev",
                    role = c("aut", "cre"),
                    email = "sizrailev@jabiruventures.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
BinSegBstrap         8.424  0.007  11.381
BinSegBstrap-package 4.929  0.000   6.197
Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Toby", "Dylan"),
                    family = "Hocking",
                    role = c("aut", "cre"),
                    email = "toby.hocking@r-project.org")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
get_complexity 3.98  0.025   5.935
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jenn",
                      family = "Kirk",
                      role = "aut"),
               person(given = c("Michael", "P."),
                      family = "Fay",
                      role = c("aut", "cre"),
                      email = "mfay@niaid.nih.gov"))
as necessary.
Maintainer: ‘Dave Hunter <dhunter@westmont.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "J."),
                      family = "Hunter",
                      role = "aut"),
               person(given = "McKalie",
                      family = "Drown",
                      role = "aut"),
               person(given = "Dave",
                      family = "Hunter",
                      role = "cre",
                      email = "dhunter@westmont.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
estintp       5.440  0.070   7.346
re_estimate   4.562  0.074   5.482
plot_outputs  4.460  0.071   5.216
print_outputs 4.250  0.047   5.062
Maintainer: ‘Yingjie Feng <fengyingjiepku@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Matias", "D."),
                      family = "Cattaneo",
                      role = "aut"),
               person(given = c("Richard", "K."),
                      family = "Crump",
                      role = "aut"),
               person(given = c("Max", "H."),
                      family = "Farrell",
                      role = "aut"),
               person(given = "Yingjie",
                      family = "Feng",
                      role = c("aut", "cre"),
                      email = "fengyingjiepku@gmail.com"))
as necessary.
Maintainer: ‘Chapman Siu <chpmn.siu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chapman",
                    family = "Siu",
                    role = c("aut", "cre"),
                    email = "chpmn.siu@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  read_audio.Rd: Wave
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bbassets.R’
Maintainer: ‘Roberto Serrano-Notivoli <roberto.serrano@unizar.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Roberto",
                    family = "Serrano-Notivoli",
                    role = c("aut", "cre"),
                    email = "roberto.serrano@unizar.es")
as necessary.
Maintainer: ‘Marcelo Ponce <m.ponce@utoronto.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marcelo",
                    family = "Ponce",
                    role = c("aut", "cre"),
                    email = "m.ponce@utoronto.ca")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
modules 6.109  0.001   7.706
Maintainer: ‘Federico Calboli <f.calboli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessio",
                      family = "Boattini",
                      role = "aut"),
               person(given = c("Federico", "C.", "F.", "Calboli;", "Vincente", "Canto", "Cassola", "together", "with", "Martin", "Maechler", "authored", "the", "function"),
                      family = "mtx.exp.",
                      role = "aut"),
               person(given = "Federico",
                      family = "Calboli",
                      role = "cre",
                      email = "f.calboli@gmail.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bilat.Rd: intersect.owin
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Michal Burdukiewicz <michalburdukiewicz@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) calc_ed.Rd:14: Lost braces; missing escapes or markup?
    14 | of groups or less than \code{a}. Both \code{a} and {b} must have the the same 
       |                                                    ^
checkRd: (-1) calc_pi.Rd:14: Lost braces; missing escapes or markup?
    14 | of groups or less than \code{a}. Both \code{a} and {b} must have the the same 
       |                                                    ^
checkRd: (-1) calc_si.Rd:14: Lost braces; missing escapes or markup?
    14 | of groups or less than \code{a}. Both \code{a} and {b} must have the the same 
       |                                                    ^
checkRd: (-1) cluster_reg_exp.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) cluster_reg_exp.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) cluster_reg_exp.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) cluster_reg_exp.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
time_to_size        6.452  0.019   8.088
compare_growth_fits 4.432  0.178   6.071
Maintainer: ‘Lester L. Yuan <yuan.lester@epa.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Lester", "L."),
                    family = "Yuan",
                    role = c("aut", "cre"),
                    email = "yuan.lester@epa.gov")
as necessary.
Maintainer: ‘Zachary Colburn <zcolburn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zachary",
                    family = "Colburn",
                    role = c("aut", "cre"),
                    email = "zcolburn@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
heat_map 3.679  0.078   5.031
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
BIOMOD_RangeSize           7.822  0.114   9.448
bm_Tuning                  7.432  0.154  10.299
bm_PlotRangeSize           6.787  0.092   9.165
BIOMOD.projection.out      4.881  0.022   5.955
BIOMOD.ensemble.models.out 4.595  0.273   6.161
BIOMOD.formated.data.PA    4.512  0.096   5.765
BIOMOD_Modeling            4.242  0.047   5.503
Maintainer: ‘Giorgio Valentini<valentini@di.unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giorgio",
                      family = "Valentini",
                      role = c("aut", "cre"),
                      email = "valentini@di.unimi.it"),
               person(given = c("Matteo", "Re", "--", "Universita'", "degli", "Studi", "di"),
                      family = "Milano",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
plot_enrichment_summaries 7.510  0.064   9.829
enrichment_analysis       4.192  0.196   5.656
Maintainer: ‘Paula Saavedra-Nieves <paula.saavedra@usc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alejandro",
                      family = "Saavedra-Nieves",
                      role = "aut"),
               person(given = "Paula",
                      family = "Saavedra-Nieves",
                      role = c("aut", "cre"),
                      email = "paula.saavedra@usc.es"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
plot.scan      10.240  0.253  14.005
write_pvolfile  4.786  0.174   6.008
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
hclu_hierarclust 8.192  0.082  11.233
Maintainer: ‘Piyal Karunarathne <piyalkarumail@yahoo.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
write.scores  5.053  0.169   8.175
write.pca.pdb 4.700  0.024   6.840
Maintainer: ‘Marie Chabbert <marie.chabbert@univ-angers.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Julien", "Pele", "with", "Jean-Michel"),
                      family = "Becu",
                      role = "aut"),
               person(given = c("Rym", "Ben"),
                      family = "Boubaker",
                      role = "aut"),
               person(given = "Herve",
                      family = "Abdi",
                      role = "aut"),
               person(given = "Marie",
                      family = "Chabbert",
                      role = c("aut", "cre"),
                      email = "marie.chabbert@univ-angers.fr"))
as necessary.
checkRd: (-1) mmds.2D.multi.Rd:118: Lost braces
   118 |   a numeric value in inches indicating the height of graph outfile. Default differs by outfile.type. The resolution for tiff and png figures is 150 dpi. See \code{pdf}, code{tiff}, \code{png}, \code{postscript}.
       |                                                                                                                                                                              ^
checkRd: (-1) mmds.2D.plot.Rd:134: Lost braces
   134 |   a numeric value in inches indicating the height of graph outfile. Default differs by outfile.type. The resolution for tiff and png figures is 150 dpi. See \code{pdf}, code{tiff}, \code{png}, \code{postscript}.
       |                                                                                                                                                                              ^
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
sil.score 4.537   0.03   5.495
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
calc_delta_var 4.977  0.113   6.728
Maintainer: ‘Francois Keck <francois.keck@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Antonio Guerrero <jaguerrero@correo.uaa.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "J.A.",
                      family = "Guerrero",
                      role = "aut"),
               person(given = "J.E.",
                      family = "Macias-Diaz",
                      role = "aut"),
               person(given = "Antonio",
                      family = "Guerrero",
                      role = "cre",
                      email = "jaguerrero@correo.uaa.mx"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
specLvlGraph 4.519  0.183   5.333
Maintainer: ‘Stefan Michiels <stefan.michiels@gustaveroussy.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Nils",
                      family = "Ternes",
                      role = "aut"),
               person(given = "Federico",
                      family = "Rotolo",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Michiels",
                      role = c("aut", "cre"),
                      email = "stefan.michiels@gustaveroussy.fr"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘poisson.ci.R’
Maintainer: ‘Rob Knell <r.knell@qmul.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rob",
                    family = "Knell",
                    role = c("aut", "cre"),
                    email = "r.knell@qmul.ac.uk")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
'library' or 'require' calls not declared from:
  ‘GGally’ ‘Hmisc’ ‘MASS’ ‘OneTwoSamples’ ‘TeachingDemos’ ‘agricolae’
  ‘e1071’ ‘gdata’ ‘granova’ ‘granovaGG’ ‘gridExtra’ ‘hcci’ ‘lattice’
  ‘lmPerm’ ‘lmtest’ ‘multcomp’ ‘multcompView’ ‘plyr’ ‘qcc’ ‘reshape’
  ‘sandwich’ ‘scales’ ‘vcd’ ‘xlsx’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
dsmb_ccru        4.373  0.065   6.198
ae_timeline_plot 4.224  0.199   6.027
Maintainer: ‘Dr Rob Briers <r.briers@napier.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dr", "Rob"),
                    family = "Briers",
                    role = c("aut", "cre"),
                    email = "r.briers@napier.ac.uk")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Tim Hulsen <thulsen@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
meme_plot 5.959  0.051   7.764
Maintainer: ‘Michael Seo <swj8874@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘PCAbiplot_Helper.R’ ‘TDAbiplot.R’ ‘TDAbiplot.Rd’
    ‘TDAbiplot_helper.R’ ‘insertAxDeets.R’ ‘insertDataTable.R’
Maintainer: ‘Ana Belen Nieto Librero <ananieto@usal.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ana", "Belen", "Nieto"),
                      family = "Librero",
                      role = c("aut", "cre"),
                      email = "ananieto@usal.es"),
               person(given = "Adelaide",
                      family = "Freitas",
                      role = "aut",
                      email = "Adelaide@ua.pt"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘AoD.Rd’ ‘AoD.biplot.Rd’ ‘CA.Rd’ ‘CA.biplot.Rd’ ‘CLPs.Rd’ ‘CVA.Rd’
    ‘CVA.biplot.Rd’ ‘PCA.Rd’ ‘PCA.biplot.Rd’ ‘PCO.Rd’ ‘PCO.biplot.Rd’
    ‘alpha.bags.Rd’ ‘axes.Rd’ ‘axes_coordinates.Rd’ ‘biplot.R’
    ‘biplot.Rd’ ‘classification.Rd’ ‘classify.Rd’ ‘density1D.Rd’
    ‘density2D.Rd’ ‘ellipses.Rd’ ‘fit.measures.Rd’ ‘interpolate.Rd’
    ‘legend.type.Rd’ ‘means.Rd’ ‘newaxes.Rd’ ‘newsamples.Rd’
    ‘plot.biplot.Rd’ ‘prediction.Rd’ ‘print.biplot.Rd’ ‘reflect.Rd’
    ‘regress.Rd’ ‘regress.biplot.Rd’ ‘rotate.Rd’ ‘samples.Rd’
    ‘summary.biplot.Rd’ ‘translate_axes.R’ ‘translate_axes.Rd’
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
samples 6.34  0.086    9.43
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bisg.R’ ‘model_cat_dir.R’ ‘model_lm.R’ ‘stanmodels.R’
Maintainer: ‘Fraenzi Korner-Nievergelt <fraenzi.korner@vogelwarte.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fraenzi",
                      family = "Korner-Nievergelt",
                      role = c("aut", "cre"),
                      email = "fraenzi.korner@vogelwarte.ch"),
               person(given = "Rob",
                      family = "Robinson",
                      role = "aut"))
as necessary.
Maintainer: ‘Matthew A. Birk <matthewabirk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Matthew", "A."),
                    family = "Birk",
                    role = c("aut", "cre"),
                    email = "matthewabirk@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bi_scale_color.Rd: geom_sf, scale_color_manual
  bi_scale_fill.Rd: geom_sf, scale_fill_manual
  bi_theme.Rd: ggplot2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Winston Chang <winston@stdout.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Winston",
                    family = "Chang",
                    role = c("aut", "cre"),
                    email = "winston@stdout.org")
as necessary.

The Description field contains
  https://github.com/wch/bisectr for examples and test script templates.
Please enclose URLs in angle brackets (<...>).
No examples, no tests, no vignettes
Maintainer: ‘Mark Wappett <m.wappett@qub.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mark",
                    family = "Wappett",
                    role = c("aut", "cre"),
                    email = "m.wappett@qub.ac.uk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
moranbir.test 7.735  0.081   9.389
moranbi.mc    7.332  0.054   9.634
Maintainer: ‘Joshua Hewitt <joshua.hewitt@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joshua",
                    family = "Hewitt",
                    role = c("aut", "cre"),
                    email = "joshua.hewitt@duke.edu")
as necessary.

The Description field contains
  posterior inference.  See Hewitt and Hoeting (2019) <arXiv:1904.07270>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Carine Legrand <c.legrand@dkfz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "C",
                      family = "Legrand",
                      role = "aut"),
               person(given = "Carine",
                      family = "Legrand",
                      role = "cre",
                      email = "c.legrand@dkfz.de"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  waic.cumhist.Rd: loo-package
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Hans Kestler <hans.kestler@uni-ulm.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stefan",
                      family = "Mundus",
                      role = "aut"),
               person(given = "Christoph",
                      family = "Müssel",
                      role = "aut"),
               person(given = "Florian",
                      family = "Schmid",
                      role = "aut"),
               person(given = "Ludwig",
                      family = "Lausser",
                      role = "aut"),
               person(given = c("Tamara", "J."),
                      family = "Blätte",
                      role = "aut"),
               person(given = "Martin",
                      family = "Hopfensitz",
                      role = "aut"),
               person(given = c("Hans", "A."),
                      family = "Kestler",
                      role = "aut"),
               person(given = "Hans",
                      family = "Kestler",
                      role = "cre",
                      email = "hans.kestler@uni-ulm.de"))
as necessary.
File ‘BiTrinA/libs/BiTrinA.so’:
  Found non-API call to R: ‘SET_TYPEOF’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bits_to_raw.Rd’ ‘bitstream-ints.R’ ‘bitstream-uints-exp-golomb.R’
Maintainer: ‘Jia-Han Shih <tommy355097@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jia-Han",
                      family = "Shih",
                      role = c("aut", "cre"),
                      email = "tommy355097@gmail.com"),
               person(given = "Wei",
                      family = "Lee",
                      role = "aut"))
as necessary.
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alessandro",
                    family = "Barbiero",
                    role = c("aut", "cre"),
                    email = "alessandro.barbiero@unimi.it")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
bivgeom-package 5.153  0.007    5.74
Maintainer: ‘Ricardo Puziol de Oliveira <rpuziol.oliveira@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ricardo", "Puziol"),
                      family = "de Oliveira",
                      role = c("aut", "cre"),
                      email = "rpuziol.oliveira@gmail.com"),
               person(given = c("Jorge", "Alberto"),
                      family = "Achcar",
                      role = "aut"))
as necessary.

The URL field contains the following bad parts:
  For
  more
  details
  see
  de
  Oliveira
  et.
  al
The URL field should be a list of URLs separated by commas or
whitespace.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
bivrp 6.942  0.144   9.321
Maintainer: ‘Ran Gao <rgao8@uic.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hakan",
                      family = "Demirtas",
                      role = "aut"),
               person(given = "Rawan",
                      family = "Allozi",
                      role = "aut"),
               person(given = "Ran",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "rgao8@uic.edu"))
as necessary.
Maintainer: ‘Jo Hardin <jo.hardin@pomona.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jo",
                    family = "Hardin",
                    role = c("aut", "cre"),
                    email = "jo.hardin@pomona.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bizicount.Rd: DHARMa
  zic.reg.Rd: DHARMa
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
extract.bizicount  7.803  0.140  11.536
simulate.zicreg    6.078  0.040   7.180
simulate.bizicount 5.975  0.095   7.595
make_DHARMa        5.129  0.027   6.831
bizicount          4.457  0.141   5.845
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
plot_hyperparams_dists     25.228  0.322  23.905
plot_hyperparams_traceplot 24.336  0.144  22.447
BKTRRegressor              23.499  0.806  23.877
plot_beta_dists            14.355  0.387  14.161
plot_temporal_betas        14.498  0.121  13.350
plot_y_estimates           12.683  0.088  11.486
plot_covariates_beta_dists 11.642  0.111  11.153
Maintainer: ‘Jan Klaschka <klaschka@cs.cas.cz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jan",
                    family = "Klaschka",
                    role = c("aut", "cre"),
                    email = "klaschka@cs.cas.cz")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘binom.blaker.VHadj.limits.Rd’:
    http://dx.doi.org/10.1080/03610918.2014.911900
  File ‘binom.blaker.limits.Rd’:
    http://dx.doi.org/10.1080/03610918.2014.911900
  File ‘poisson.blaker.limits.Rd’:
    http://dx.doi.org/10.1080/03610918.2014.911900
Maintainer: ‘Bernhard Lehnert <bernhard.lehnert@uni-greifswald.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bernhard",
                    family = "Lehnert",
                    role = c("aut", "cre"),
                    email = "bernhard.lehnert@uni-greifswald.de")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘BlandAltmanLeh-package.Rd’:
    \keyword{ measurement precision, test-retest relia [TRUNCATED]
Maintainer: ‘Oswaldo Gressani <oswaldo_gressani@hotmail.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  coxlps.Rd: Surv, coxph
  curelps.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
gamlps       6.494  0.027   7.574
amlps        6.034  0.176   8.131
plot.amlps   5.715  0.004   7.327
plot.curelps 5.380  0.001   6.314
penaltyplot  5.356  0.017   6.683
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
ble_profile   11.108  0.094  14.151
blqr          10.882  0.003  13.709
expl_boundary  5.269  0.010   6.980
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
bsem 5.182  0.074   6.014
bcfa 4.373  0.130   6.163
checkRd: (-1) posteriorFeasibility.Rd:25: Escaped LaTeX specials: \#
checkRd: (-1) sp500Returns.Rd:4: Escaped LaTeX specials: \&
Maintainer: ‘David J. Harris <DavHarris@UCDavis.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("David", "J."),
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "DavHarris@UCDavis.edu")
as necessary.

The Date field is not in ISO 8601 yyyy-mm-dd format.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
blend 4.184  0.298   6.311
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plot_Blend 5.693  0.061   6.616
checkRd: (-1) RLdata500.Rd:8: Lost braces
     8 | A data frame with five variables: \code{fname_c1},\code{lname_c1},  \code{by}, code{bm}, \code{bd}.
       |                                                                                    ^
checkRd: (-1) identity.RLdata500.Rd:15: Lost braces
    15 | format A vector that contains the code{id}
       |                                       ^
Maintainer: ‘Fraenzi Korner-Nievergelt <fraenzi.korner@oikostat.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fraenzi",
                      family = "Korner-Nievergelt",
                      role = c("aut", "cre"),
                      email = "fraenzi.korner@oikostat.ch"),
               person(given = "Tobias",
                      family = "Roth",
                      role = "aut"),
               person(given = "Stefanie",
                      family = "von Felten",
                      role = "aut"),
               person(given = "Jerome",
                      family = "Guelat",
                      role = "aut"),
               person(given = "Bettina",
                      family = "Almasi",
                      role = "aut"),
               person(given = "Pius",
                      family = "Korner-Nievergelt",
                      role = "aut"))
as necessary.
Maintainer: ‘S.Kovalchik <s.a.kovalchik@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "S.",
                      family = "Kovalchik",
                      role = "aut"),
               person(family = "S.Kovalchik",
                      role = "cre",
                      email = "s.a.kovalchik@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Marie Perrot-Dockès <marie.perrocks@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "M.",
                      family = "Perrot-Dock\\`es",
                      role = "aut"),
               person(given = "C.",
                      family = "Lévy-Leduc",
                      role = "aut"),
               person(given = "Marie",
                      family = "Perrot-Dockès",
                      role = "cre",
                      email = "marie.perrocks@gmail.com"))
as necessary.

The Description field contains
  in the paper Perrot-Dockès et al. (2019) <arXiv:1806.10093>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Marvin N. Wright <cran@wrig.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Roman",
                      family = "Hornung",
                      role = "aut"),
               person(given = c("Marvin", "N."),
                      family = "Wright",
                      role = c("aut", "cre"),
                      email = "cran@wrig.de"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plot.nppi 10.566  0.024  12.570
nppi       9.852  0.169  12.282
Maintainer: ‘Emanuele Cordano <emanuele.cordano@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emanuele",
                    family = "Cordano",
                    role = c("aut", "cre"),
                    email = "emanuele.cordano@gmail.com")
as necessary.

The Description field contains
  (http://en.wikipedia.org/wiki/Block_matrix). The block matrix is here
Please enclose URLs in angle brackets (<...>).
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
MBI 10.815  0.106  14.445
Maintainer: ‘Fabio Ashtar Telarico <telaricof@fdv.uni-lj.si>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
RF 5.086  0.243   6.521
Maintainer: ‘Jean-Benoist Leger <jbleger@hds.utc.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jean-Benoist",
                      family = "Leger",
                      role = c("aut", "cre"),
                      email = "jbleger@hds.utc.fr"),
               person(given = "Pierre",
                      family = "Barbillon",
                      role = "aut",
                      email = "pierre.barbillon@agroparistech.fr"),
               person(given = "Julien",
                      family = "Chiquet",
                      role = "aut",
                      email = "julien.chiquet@inrae.fr"))
as necessary.
Maintainer: ‘Greg Snow <538280@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Greg",
                    family = "Snow",
                    role = c("aut", "cre"),
                    email = "538280@gmail.com")
as necessary.
Maintainer: ‘Rodney Edmondson <rodney.edmondson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("R.", "N."),
                      family = "Edmondson.",
                      role = "aut"),
               person(given = "Rodney",
                      family = "Edmondson",
                      role = "cre",
                      email = "rodney.edmondson@gmail.com"))
as necessary.
checkRd: (-1) durban.Rd:16: Lost braces; missing escapes or markup?
    16 | This data set was obtained from the durban.rowcol {agridat} example in package 'agridat' 
       |                                                   ^
checkRd: (-1) fraction.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fraction.Rd:31-32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fraction.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
design 4.444  0.008   5.837
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘assg2xBalance.R’
checkRd: (-1) estimate_density.Rd:25: Lost braces; missing escapes or markup?
    25 | evenly spaced points between \code{min} and {max}.
       |                                             ^
Maintainer: ‘Vahid Nassiri <vahid.nassiri@openanalytics.eu>’

The Description field contains
  <https://www.tandfonline.com/doi/full/10.1080/19466315.2019.1701546>).
Please use permanent DOI markup for linking to publications as in <doi:prefix/suffix>.
Maintainer: ‘Daniel Brunner <daniel.brunner@hhu.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daniel",
                      family = "Brunner",
                      role = c("aut", "cre"),
                      email = "daniel.brunner@hhu.de",
                      comment = "aut"),
               person(given = "Constantin",
                      family = "Weiser",
                      role = "aut",
                      comment = "ctr"),
               person(given = "Andre",
                      family = "Romahn",
                      role = "aut",
                      comment = "ctr"))
as necessary.
Maintainer: ‘Furong Sun <furongs@vt.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Furong",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "furongs@vt.edu"),
               person(given = "Zhonggai",
                      family = "Li",
                      role = "aut",
                      email = "zli@bostonbiomedical.com"))
as necessary.
Maintainer: ‘Christoph Ritschel <christoph.ritschel@met.fu-berlin.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christoph",
                    family = "Ritschel",
                    role = c("aut", "cre"),
                    email = "christoph.ritschel@met.fu-berlin.de")
as necessary.
Maintainer: ‘Paulino Perez Rodriguez <perpdgo@colpos.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Gustavo", "de", "los"),
                      family = "Campos",
                      role = "aut"),
               person(given = c("Paulino", "Perez"),
                      family = "Rodriguez,",
                      role = "aut"),
               person(given = c("Paulino", "Perez"),
                      family = "Rodriguez",
                      role = "cre",
                      email = "perpdgo@colpos.mx"))
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
'::' or ':::' imports not declared from:
  ‘abind’ ‘abjutils’ ‘bayesplot’ ‘devtools’ ‘dplyr’ ‘fs’ ‘furrr’
  ‘knitr’ ‘purrr’ ‘readr’ ‘stringr’ ‘tibble’ ‘tidyr’
'library' or 'require' calls not declared from:
  ‘future’ ‘tidyverse’
checkRd: (-1) bluebike.Rd:17: Lost braces
    17 | \item{\code{import_month_data}}\cr {Takes in numeric year/month values and imports data from \href{https://www.bluebikes.com/system-data}{Blue Bikes System Data} for the specified time}
       |                                    ^
checkRd: (-1) bluebike.Rd:18: Lost braces; missing escapes or markup?
    18 | \item{\code{station_distance}}\cr {Returns stations with distance in ascending order given the user's current location}
       |                                   ^
checkRd: (-1) bluebike.Rd:19: Lost braces; missing escapes or markup?
    19 | \item{\code{station_radius}}\cr {Plots the position of the stations within walking distance (500 m), and present the basic information about the stations via leaflet}
       |                                 ^
checkRd: (-1) bluebike.Rd:20: Lost braces; missing escapes or markup?
    20 | \item{\code{trip_distance}}\cr {Computes the geographical distance between the start and end stations}
       |                                ^
checkRd: (-1) bluebike.Rd:25: Lost braces; missing escapes or markup?
    25 | \item{\code{trip_history_sample}} \cr {A sample of 1000 trip data entries from February 2022}
       |                                       ^
checkRd: (-1) bluebike.Rd:26: Lost braces; missing escapes or markup?
    26 | \item{\code{station_data}} \cr {A dataset that includes identification, position, and other basic information about bluebike stations}
       |                                ^
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
test_extrapolation 6.775  0.053   8.951
estimate_oc_stock  6.213  0.011   6.820
estimate_oc        5.204  0.039   6.005
estimate_seq_rate  4.879  0.016   5.700
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
iBMA 4.726  0.161    6.67
Maintainer: ‘Michael Turchin <mturchin20@uchicago.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘GetModelPriorMatrix.Rd’:
    https://doi.org/10.1371/journal.pone.0065245
  File ‘GlobalLipids2013.GWASsnps.Rd’:
    https://doi.org/10.1038/ng.2797
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bmem.Rd: sem
  power.bmem.Rd: model.syntax
  power.curve.Rd: model.syntax
  summary.power.Rd: lavaan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
bmem         0.519  0.013  12.587
summary.bmem 0.290  0.010  12.303
Maintainer: ‘Zhiyong Zhang <zhiyongzhang@nd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhiyong",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zhiyongzhang@nd.edu"),
               person(given = "Lijuan",
                      family = "Wang",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bmem.Rd: sem
  bmem.bs.Rd: sem
  bmem.em.Rd: sem
  bmem.em.boot.Rd: sem
  bmem.em.jack.Rd: sem
  bmem.list.Rd: sem
  bmem.list.boot.Rd: sem
  bmem.list.jack.Rd: sem
  bmem.mi.Rd: sem
  bmem.mi.boot.Rd: sem
  bmem.mi.jack.Rd: sem
  bmem.pair.Rd: sem
  bmem.pair.boot.Rd: sem
  bmem.pair.jack.Rd: sem
  bmem.sobel.Rd: sem
  popPar.Rd: lavaan
  power.basic.Rd: model.syntax
  power.boot.Rd: model.syntax
  power.curve.Rd: model.syntax
  summary.power.Rd: lavaan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
power.basic 4.674  0.227   6.986
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
bet 4.537  0.113    5.48
checkRd: (-1) dot-pred_array_to_df.Rd:20: Lost braces; missing escapes or markup?
    20 | Helper function for as.data.frame.{fitted, forecast}. Converts predictive array to data.frame.
       |                                   ^
Maintainer: ‘Reza Mohammadi <a.mohammadi@uva.nl>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  summary.bmmfit.Rd: summary.brmsfit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
SDMdist 5.386  0.046   7.049
Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gregory",
                    family = "Jefferis",
                    role = c("aut", "cre"),
                    email = "jefferis@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
BMRMM 4.546  0.008   6.048
Maintainer: ‘Michele Scandola <michele.scandola@univr.it>’

The BugReports field in DESCRIPTION has
  https://github.com/michelescandola/bmscstan
which should likely be
  https://github.com/michelescandola/bmscstan/issues
instead.
checkRd: (-1) BMSC_pareto_k_table.Rd:54-56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMSC_pareto_k_table.Rd:57-59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMSC_pareto_k_table.Rd:60-63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMSC_pareto_k_table.Rd:64-66: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMSC_pareto_k_table.Rd:67-71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMSC_pareto_k_table.Rd:72-74: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Stefan Zeugner <stefan.zeugner@ec.europa.eu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Feldkircher",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Zeugner",
                      role = c("aut", "cre"),
                      email = "stefan.zeugner@ec.europa.eu"),
               person(given = "Paul",
                      family = "Hofmarcher",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
bms      4.757  0.030   5.434
plotComp 4.787  0.000   5.972
c.bma    4.070  0.019   5.148
Examples with CPU (user + system) or elapsed time > 5s
                                 user system elapsed
Bmchoice                        5.168  0.098   6.545
calculate_validation_statistics 4.547  0.038   5.478
Bsptime                         4.217  0.020   5.429
Maintainer: ‘Andrey Duvan Rincon Torres <adrincont@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Valeria", "Bejarano"),
                      family = "Salcedo",
                      role = "aut",
                      email = "vbejaranos@unal.edu.co"),
               person(given = c("Sergio", "Alejandro", "Calderon", "Villanueva", "Andrey", "Duvan", "Rincon", "Torres"),
                      family = "<adrincont@unal.edu.co>",
                      role = "aut",
                      email = "adrincont@unal.edu.co"),
               person(given = c("Andrey", "Duvan", "Rincon"),
                      family = "Torres",
                      role = "cre",
                      email = "adrincont@unal.edu.co"))
as necessary.
checkRd: (-1) autoplot.tsregime.Rd:20: Lost braces
    20 | Graph for the stochastic processes of the object \ dQuote {\ code {tsregime}} for: Output process and if they exist for: Threshold process and Covariates process. In the case that there are missing data, a red line is drawn at the indicated time.
       |                                                           ^
checkRd: (-1) autoplot.tsregime.Rd:20: Lost braces; missing escapes or markup?
    20 | Graph for the stochastic processes of the object \ dQuote {\ code {tsregime}} for: Output process and if they exist for: Threshold process and Covariates process. In the case that there are missing data, a red line is drawn at the indicated time.
       |                                                                   ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  autoplot.Rd: autolayer, ggplot, fortify
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
BMTfit.qme 9.082  0.008  11.079
Examples with CPU (user + system) or elapsed time > 5s
                                user system elapsed
query_bndespar_desimbursements 1.967  0.147   6.151
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  network.run.Rd: jags.model
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
seq_node_monitor 5.733  0.186   8.925
sensquery        4.883  0.074   6.210
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘bnns.R’
Maintainer: ‘Marvin N. Wright <marv@wrig.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Marvin", "N."),
                    family = "Wright",
                    role = c("aut", "cre"),
                    email = "marv@wrig.de")
as necessary.
Maintainer: ‘Elias Carvalho <ecacarva@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Elias",
                      family = "Carvalho",
                      role = c("aut", "cre"),
                      email = "ecacarva@gmail.com"),
               person(given = c("Joao", "R", "N"),
                      family = "Vissoci",
                      role = "aut"),
               person(given = "Luciano",
                      family = "Andrade",
                      role = "aut"),
               person(given = "Wagner",
                      family = "Machado",
                      role = "aut"),
               person(given = c("Emerson", "P"),
                      family = "Cabrera",
                      role = "aut"),
               person(given = c("Julio", "C"),
                      family = "Nievola",
                      role = "aut"))
as necessary.
checkRd: (-1) MvInv.Rd:23-35: Lost braces
    23 | function(eps, u = 0.5, alpha = 1, kappa = 1, gama = 1 / 2, N = 3001) {
       |                                                                      ^
checkRd: (-1) dt_.Rd:19-21: Lost braces
    19 | function(x, df, mean, sd) {
       |                           ^
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
GOFplots             5.442  0.102   6.964
plot.NRMI2           4.352  0.052   6.235
GOFplots_censored    3.947  0.131   5.339
GOFplots_noncensored 3.931  0.036   5.717
plot.NRMI1           3.579  0.063   5.324
summary.NRMI2        3.575  0.000   5.228
Maintainer: ‘Riccardo Corradin <riccardo.corradin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Riccardo",
                      family = "Corradin",
                      role = c("aut", "cre"),
                      email = "riccardo.corradin@gmail.com"),
               person(given = "Antonio",
                      family = "Canale",
                      role = "ctb"),
               person(given = "Bernardo",
                      family = "Nipoti",
                      role = "ctb"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Alejandro Ochoa <alejandro.ochoa@duke.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘David Alejandro Martell Juarez <alex91599@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Martell-Juarez",
                      role = "aut"),
               person(given = c("D.A.", "&"),
                      family = "Nieto-Barajas",
                      role = "aut"),
               person(family = "L.E.",
                      role = "aut"),
               person(given = c("David", "Alejandro", "Martell"),
                      family = "Juarez",
                      role = "cre",
                      email = "alex91599@gmail.com"))
as necessary.
Maintainer: ‘Joe Suzuki <j-suzuki@sigmath.es.osaka-u.ac.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Joe",
                      family = "Suzuki",
                      role = c("aut", "cre"),
                      email = "j-suzuki@sigmath.es.osaka-u.ac.jp"),
               person(given = "Jun",
                      family = "Kawahara",
                      role = "aut"))
as necessary.
Maintainer: ‘Georgios Papageorgiou <gpapageo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Georgios",
                    family = "Papageorgiou",
                    role = c("aut", "cre"),
                    email = "gpapageo@gmail.com")
as necessary.
checkRd: (-1) strength.viewer.Rd:148: Lost braces in \itemize; meant \describe ?
checkRd: (-1) strength.viewer.Rd:149: Lost braces in \itemize; meant \describe ?
checkRd: (-1) strength.viewer.Rd:150: Lost braces in \itemize; meant \describe ?
checkRd: (-1) strength.viewer.Rd:151: Lost braces in \itemize; meant \describe ?
checkRd: (-1) strength.viewer.Rd:152: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Brian J. Smith <brian-j-smith@uiowa.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) boa.chain.collapse.Rd:20: Lost braces
    20 | \seealso{ code{\link{boa.chain.reset}}, code{\link{boa.chain.subset}} }
       |               ^
checkRd: (-1) boa.chain.collapse.Rd:20: Lost braces
    20 | \seealso{ code{\link{boa.chain.reset}}, code{\link{boa.chain.subset}} }
       |                                             ^
checkRd: (-1) refAnnots.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) refAnnots.Rd:11-12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) untreatedAnnots.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) untreatedAnnots.Rd:11-12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) untreatedAnnots.Rd:13-14: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Gleidson Mendes Rebouças <gleidsonreboucas@uern.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Gleidson", "Mendes"),
                      family = "Rebouças",
                      role = c("aut", "cre"),
                      email = "gleidsonreboucas@uern.br"),
               person(given = c("Thiago", "Renee"),
                      family = "Felipe",
                      role = "aut"))
as necessary.
Maintainer: ‘Mario Annau <mario.annau@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("See", "AUTHORS"),
                      family = "file.",
                      role = "aut"),
               person(given = "Mario",
                      family = "Annau",
                      role = "cre",
                      email = "mario.annau@gmail.com"))
as necessary.
checkRd: (-1) Extractor.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Extractor.Rd:19: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Ying Yuan <yyuan@mdanderson.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ying",
                      family = "Yuan",
                      role = c("aut", "cre"),
                      email = "yyuan@mdanderson.org"),
               person(given = "Suyu",
                      family = "Liu",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
get.oc 5.523  0.001   7.716
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot.R’ ‘utils.R’
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
get_graph   0.029  0.004  10.044
get_stats   0.006  0.001  10.006
get_list    0.002  0.004  10.022
import_data 0.002  0.004  10.012
Maintainer: ‘James Curran <j.curran@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "James",
                    family = "Curran",
                    role = c("aut", "cre"),
                    email = "j.curran@auckland.ac.nz")
as necessary.
Maintainer: ‘Dongmei Li <dongmei_li@urmc.rochester.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dongmei",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "dongmei_li@urmc.rochester.edu")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘BonEV-package.Rd’:
    \keyword{multiple testing procedure, false discove [TRUNCATED]
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot.summary.horseshoe 6.751  0.193   8.622
Maintainer: ‘Levi McClenny <levimcclenny@tamu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Levi",
                      family = "McClenny",
                      role = c("aut", "cre"),
                      email = "levimcclenny@tamu.edu"),
               person(given = "Mahdi",
                      family = "Imani",
                      role = "aut"),
               person(given = "Ulisses",
                      family = "Braga-Neto",
                      role = "aut"))
as necessary.
Maintainer: ‘Steven L. Scott <steve.the.bayesian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Steven", "L.", "Scott", "is", "the", "sole"),
                      family = "author",
                      role = "aut"),
               person(given = c("creator", "of", "the", "BOOM", "project.", "Some", "code", "in", "the", "BOOM", "libraries", "has", "been", "modified", "from", "other", "open", "source", "projects.", "These", "include"),
                      family = "Cephes",
                      role = "aut",
                      comment = "obtained from Netlib, written by Stephen\n   L. Moshier"),
               person(family = "NEWUOA",
                      role = "aut",
                      comment = "M.J.D Powell, obtained from Powell's web site"),
               person(given = c("a", "modified", "version", "of", "the", "R", "math", "libraries.", "Original", "copyright", "notices", "have", "been", "maintained", "in", "all", "source", "files.", "In", "these"),
                      family = "cases",
                      role = "aut",
                      comment = "R core development team"),
               person(given = c("copyright", "claimed", "by", "Steven", "L.", "Scott", "is", "limited", "to", "modifications", "made", "to", "the", "original", "code.", "Google", "claims", "copyright", "for", "code", "written", "while", "Steven", "L.", "Scott", "was", "employed", "at", "Google", "from", "2008", "-"),
                      family = "2018",
                      role = "aut"),
               person(given = c("but", "BOOM", "is", "not", "an", "officially", "supported", "Google"),
                      family = "project.",
                      role = "aut"),
               person(given = c("Steven", "L."),
                      family = "Scott",
                      role = "cre",
                      email = "steve.the.bayesian@gmail.com"))
as necessary.
Maintainer: ‘Steven L. Scott <steve.the.bayesian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Steven", "L."),
                    family = "Scott",
                    role = c("aut", "cre"),
                    email = "steve.the.bayesian@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  nnet.Rd: MvnPrior
  suggest.burn.Rd: SuggestBurnLogLikelihood
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
File ‘BoomSpikeSlab/libs/BoomSpikeSlab.so’:
  Found non-API call to R: ‘Rf_isFrame’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
nnet 4.244  0.067   6.497
Maintainer: ‘Amol Pande <amoljpande@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Amol",
                      family = "Pande",
                      role = c("aut", "cre"),
                      email = "amoljpande@gmail.com"),
               person(given = "Hemant",
                      family = "Ishwaran",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Marc Henrion <mhenrion@mlw.mw>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Gianmarco Vacca <gianmarco.vacca@unicatt.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gianmarco",
                      family = "Vacca",
                      role = c("aut", "cre"),
                      email = "gianmarco.vacca@unicatt.it"),
               person(given = "Stefano",
                      family = "Bertelli",
                      role = "aut"))
as necessary.
Maintainer: ‘Zhengguo Xu <zhengguoxu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Ari B. Friedman <abfriedman@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Keith", "A."),
                      family = "Marill",
                      role = "aut"),
               person(given = c("Ari", "B."),
                      family = "Friedman",
                      role = c("aut", "cre"),
                      email = "abfriedman@gmail.com"))
as necessary.
Maintainer: ‘Samarendra Das <samarendra4849@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Samarendra",
                    family = "Das",
                    role = c("aut", "cre"),
                    email = "samarendra4849@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
coefs.plsR.adapt.ncomp 4.795  0.175   6.867
nbcomp.bootplsR        4.168  0.037   5.579
Maintainer: ‘Jae H. Kim <jaekim8080@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jae.", "H."),
                      family = "Kim",
                      role = "aut",
                      email = "jaekim8080@gmail.com"),
               person(given = c("Jae", "H."),
                      family = "Kim",
                      role = "cre",
                      email = "jaekim8080@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
censboot  13.506  0.117  16.018
boot       5.097  0.000   6.259
tilt.boot  4.529  0.000   5.581
Maintainer: ‘Benjamin Baumgartner <benjamin@baumgrt.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Benjamin",
                      family = "Baumgartner",
                      role = c("aut", "cre"),
                      email = "benjamin@baumgrt.com"),
               person(given = "Riccardo",
                      family = "Gatto",
                      role = "aut",
                      email = "gatto@stat.unibe.ch"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dimitris",
                    family = "Rizopoulos",
                    role = c("aut", "cre"),
                    email = "d.rizopoulos@erasmusmc.nl")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
boot.stepAIC 11.109  0.031  12.217
'library' or 'require' call not declared from: ‘survival’
Maintainer: ‘Scott Ritchie <sritchie73@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Qin", "Qin"),
                      family = "Huang",
                      role = "aut"),
               person(given = "Scott",
                      family = "Ritchie",
                      role = c("aut", "cre"),
                      email = "sritchie73@gmail.com"))
as necessary.
Maintainer: ‘Scott Kostyshak <scott.kostyshak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "S",
                      family = "original",
                      role = "aut"),
               person(given = "from",
                      family = "StatLib",
                      role = "aut"),
               person(given = c("by", "Rob", "Tibshirani.", "R", "port", "by", "Friedrich"),
                      family = "Leisch.",
                      role = "aut"),
               person(given = "Scott",
                      family = "Kostyshak",
                      role = "cre",
                      email = "scott.kostyshak@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
tooth 6.078  0.003   6.815
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
boot.twostage     13.018  0.043  15.734
direct.boot.stsrs  5.509  0.000   6.671
Maintainer: ‘Aaron Fisher <afishe27@alumni.jh.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "Fisher",
                    role = c("aut", "cre"),
                    email = "afishe27@alumni.jh.edu")
as necessary.

The Description field contains
  in <doi:10.1080/01621459.2015.1062383> (see also <arXiv:1405.0922> ).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) bootSVD.Rd:13: Lost braces; missing escapes or markup?
    13 | \item{Y}{initial data sample, which can be either a matrix or a \code{\link{ff}} matrix. \code{Y} can be either tall (\eqn{p} by \eqn{n}) or wide (\eqn{n} by \eqn{p}). If \code{Y} is entered and \code{V}, \code{d} and \code{U} (see definitions below) are not entered, then \code{bootSVD} will also compute the SVD of \code{Y}. In this case where the SVD is computed, \code{bootSVD} will assume that the larger dimension of \code{Y} is \eqn{p}, and the smaller dimension of code {Y} is \eqn{n} (i.e. \code{bootSVD} assumes that (\eqn{p>n}). This assumption can be overriden by manually entering \code{V}, \code{U} and \code{d}.\cr
       |                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  As2Vs.Rd: ff
  bootSVD.Rd: ff
  fastSVD.Rd: ff
  ffmatrixmult.Rd: ff
  getMomentsAndMomentCI.Rd: ff
  reindexMatricesByK.Rd: ff
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Guy Nason <g.nason@imperial.ac.uk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  graphoptBbd.Rd: igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Francis K.C. Hui <fhui28@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Francis", "K.C."),
                      family = "Hui",
                      role = c("aut", "cre"),
                      email = "fhui28@gmail.com"),
               person(given = "Wade",
                      family = "Blanchard",
                      role = "aut"))
as necessary.

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.
Maintainer: ‘Jeffrey A. Boatman <jeffrey.boatman@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jeffrey", "A."),
                      family = "Boatman",
                      role = c("aut", "cre"),
                      email = "jeffrey.boatman@gmail.com"),
               person(given = c("David", "M."),
                      family = "Vock",
                      role = "aut"),
               person(given = c("Joseph", "S."),
                      family = "Koopmeiners",
                      role = "aut"))
as necessary.
Maintainer: ‘Miron Bartosz Kursa <M.Kursa@icm.edu.pl>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  getImpExtra.Rd: ranger
  getImpLegacyRf.Rd: ranger
  getImpRf.Rd: ranger
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
getImpLegacyRf 7.158  0.141   9.058
Maintainer: ‘Raphaël Clifford <clifford@cs.bris.ac.uk>’

The Description field contains
  (2017) <arXiv:1706.01260>. Also provides functions for generating
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Pierre Lefeuvre <pierre.lefeuvre@cirad.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pierre",
                    family = "Lefeuvre",
                    role = c("aut", "cre"),
                    email = "pierre.lefeuvre@cirad.fr")
as necessary.
Maintainer: ‘Sen Tian <stian@stern.nyu.edu>’

The Description field contains
  for Subset Selection in Least Squares Regression", <arXiv:1911.10191>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
mod_random_clust_sim  9.3  0.198   11.88
Maintainer: ‘Alexis Derumigny <a.f.f.derumigny@tudelft.nl>’

The Description field contains
  Girard, Guyonvarch (2021) <arXiv:2101.05780>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Emanuele Cordano <emanuele.cordano@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emanuele",
                    family = "Cordano",
                    role = c("aut", "cre"),
                    email = "emanuele.cordano@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
STR_FE 8.012  0.216  10.652
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
boxclip 4.882  0.214   6.022
Maintainer: ‘Shinichiro Tomizono <cowares@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shinichiro",
                    family = "Tomizono",
                    role = c("aut", "cre"),
                    email = "cowares@gmail.com")
as necessary.
File ‘box/libs/box.so’:
  Found non-API calls to R: ‘ENVFLAGS’, ‘SET_ENVFLAGS’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  print.xtable.Rd: xtable
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Michael", "P."),
                      family = "Fay",
                      role = c("aut", "cre"),
                      email = "mfay@niaid.nih.gov"),
               person(given = "Allyson",
                      family = "Mateja",
                      role = "ctb"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Davide Buttarazzi <davidebuttarazzi@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Davide",
                    family = "Buttarazzi",
                    role = c("aut", "cre"),
                    email = "davidebuttarazzi@outlook.com")
as necessary.
Maintainer: ‘Yaoxiang Li <yl814@georgetown.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiang",
                      family = "Lu",
                      role = "aut",
                      email = "Xiang_Luaturmc.rochester.edu"),
               person(given = "Yaoxiang",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "yl814atgeorgetown.edu"),
               person(given = "Tanzy",
                      family = "Love",
                      role = "aut",
                      email = "tanzy_loveaturmc.rochester.edu"))
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
evaluatePrior 5.583  0.066   6.575
Maintainer: ‘Jianzhao Gao and Xiaodan Fan <gaojz@nankai.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jianzhao",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "gaojz@nankai.edu.cn"),
               person(given = "Linghao",
                      family = "Shen",
                      role = "aut"),
               person(given = "Xiaodan",
                      family = "Fan",
                      role = "aut"))
as necessary.
checkRd: (-1) bp_rats.Rd:41: Escaped LaTeX specials: \&
checkRd: (-1) bp_sv.Rd:75: Lost braces; missing escapes or markup?
    75 | $$SV = sqrt(sum(x_{i+1} - x_i)^2/n-1)$$
       |                   ^
checkRd: (-1) bp_sv.Rd:80: Lost braces; missing escapes or markup?
    80 | $$SD = sqrt(sum(x_{i+1} - xbar)^2/n-1)$$
       |                   ^
checkRd: (-1) sv.Rd:78: Lost braces; missing escapes or markup?
    78 | $$SV = sqrt(sum(x_{i+1} - x_i)^2/n-1)$$
       |                   ^
checkRd: (-1) sv.Rd:82: Lost braces; missing escapes or markup?
    82 | $$SD = sqrt(sum(x_{i+1} - xbar)^2/n-1)$$
       |                   ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bp_report.Rd: grid.arrange
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
bp_scatter 6.083  0.063   8.188
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘sim_dat_one_trial_exp_covar.R’ ‘sim_dat_one_trial_exp_nocovar.R’
Maintainer: ‘Laura D'Angelo <laura.dangelo@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Laura",
                    family = "D'Angelo",
                    role = c("aut", "cre"),
                    email = "laura.dangelo@live.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
covEffectOR1     6.033  0.040   7.845
dicOR1           4.236  0.024   5.369
summary.bqrorOR1 4.096  0.040   5.374
ineffactorOR1    4.081  0.028   5.795
quantregOR1      4.068  0.000   5.634
logMargLikeOR1   3.956  0.007   5.024
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
brace 5.011  0.171   6.112
Maintainer: ‘Ville Satopää <ville.satopaa@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
sample_aggregator 9.592  0.102  11.415
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
makeBraidReport    7.495  0.040   9.360
basicBraidAnalysis 6.513  0.073   7.755
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
calcBraidConfInt   5.722  0.008   6.587
calcBraidBootstrap 5.544  0.000   6.040
braidrm            5.424  0.019   6.214
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘AddXMLInternal.R’ ‘BrowseSVG.R’ ‘MakeAccessibleSVGInternal.R’
    ‘RewriteSVG.R’ ‘ViewSVG.R’
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
MakeAccessibleSVGMethod 7.099  0.065   9.384
ViewSVG                 6.801  0.007   8.570
TwoFactors              4.904  0.020   7.613
OneFactor               3.760  0.139   5.201
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
population.est        8.687  0.000  11.848
population.test       7.342  0.007   9.218
population.test.MinPv 6.375  0.000   7.555
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot_global.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘BranchGLM.R’ ‘BranchGLMTable.R’ ‘VariableImportance.R’
    ‘VariableImportance.boot.R’ ‘summaryBranchGLMVS.R’
Maintainer: ‘Camilo Jose Torres-Jimenez <cjtorresj@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Camilo", "Jose"),
                    family = "Torres-Jimenez",
                    role = c("aut", "cre"),
                    email = "cjtorresj@unal.edu.co")
as necessary.
Maintainer: ‘Benjamin Schlegel <kontakt@benjaminschlegel.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Benjamin",
                      family = "Schlegel",
                      role = c("aut", "cre"),
                      email = "kontakt@benjaminschlegel.ch"),
               person(given = "Marco",
                      family = "Steenbergen",
                      role = "aut"))
as necessary.
Maintainer: ‘Mike Lee <random.deviate@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mike",
                    family = "Lee",
                    role = c("aut", "cre"),
                    email = "random.deviate@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
predict.sven 6.892  0.301   9.075
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘get_sinesp_data.R’ ‘get_sinesp_vde_data.R’
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
lineplot    6.780  0.079  10.633
brcal       6.754  0.069   9.005
plot_params 5.714  0.071   7.159
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
plotSLICE 5.038  0.038   5.695
Maintainer: ‘Amy D Willis <adwillis@uw.edu>’

The Description field contains
  <doi:10.1111/rssc.12206>, and Willis (2016) <arXiv:1604.02598>, as well
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
plot.breakfast.cpts  6.193  0.067   7.497
print.breakfast.cpts 3.906  0.031   5.198
Maintainer: ‘Priyadarshana W.J.R.M. <mjayawardana@swin.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Priyadarshana",
                      family = "W.J.R.M.",
                      role = c("aut", "cre"),
                      email = "mjayawardana@swin.edu.au"),
               person(given = "Georgy",
                      family = "Sofronov",
                      role = "aut"))
as necessary.

File 'R/breakpoint-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Santiago I. Hurtado <santih@carina.fcaglp.unlp.edu.ar>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Santiago", "I."),
                    family = "Hurtado",
                    role = c("cre", "aut"),
                    email = "santih@carina.fcaglp.unlp.edu.ar")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Adam J King <king@cpp.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Adam", "J"),
                    family = "King",
                    role = c("aut", "cre"),
                    email = "king@cpp.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘read_any_breathtest.R’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
stan_fit 5.147  0.301   6.927
Maintainer: ‘Christian Graul <christian.graul@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christian",
                      family = "Graul",
                      role = c("aut", "cre"),
                      email = "christian.graul@gmail.com"),
               person(given = "Carsten",
                      family = "Poppinga",
                      role = "aut"))
as necessary.
Maintainer: ‘Andrew McKenzie <amckenz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Andrew",
                      family = "McKenzie",
                      role = c("aut", "cre"),
                      email = "amckenz@gmail.com"),
               person(given = "Minghui",
                      family = "Wang",
                      role = "aut"),
               person(given = "Bin",
                      family = "Zhang",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  brnb.Rd: negbin
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) brglm.Rd:173: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:174: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:175-176: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:177-178: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:179-180: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:181-182: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brglm.Rd:183-184: Lost braces in \itemize; meant \describe ?
checkRd: (-1) profile.brglm.Rd:54-55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) profile.brglm.Rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) profile.brglm.Rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) profile.brglm.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) printHands.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) printHands.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) printHands.Rd:42: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Aurora Torrente <etorrent@est-econ.uc3m.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javier", "Albert"),
                      family = "Smet",
                      role = "aut",
                      email = "javas@kth.se"),
               person(given = c("Aurora", "Torrente.", "Alice"),
                      family = "Parodi",
                      role = "aut",
                      email = "etorrent@est-econ.uc3m.es"),
               person(given = "Mirco",
                      family = "Patriarca",
                      role = "aut"),
               person(given = "Laura",
                      family = "Sangalli",
                      role = "aut"),
               person(given = "Piercesare",
                      family = "Secchi",
                      role = "aut"),
               person(given = "Simone",
                      family = "Vantini",
                      role = "aut"),
               person(given = "Valeria",
                      family = "Vitelli",
                      role = "aut"),
               person(given = "as",
                      family = "contributors.",
                      role = "aut"),
               person(given = "Aurora",
                      family = "Torrente",
                      role = "cre",
                      email = "etorrent@est-econ.uc3m.es"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
BRISC_variogram.ci 5.854  0.142   8.070
BRISC_bootstrap    4.833  0.058   6.409
Maintainer: ‘Mauricio Sadinle <msadinle@uw.edu>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘BRL.Rd’:
    https://doi.org/10.1080/01621459.2016.1148612
  File ‘bipartiteGibbs.Rd’:
    https://doi.org/10.1080/01621459.2016.1148612
  File ‘compareRecords.Rd’:
    https://doi.org/10.1080/01621459.2016.1148612
  File ‘linkRecords.Rd’:
    https://doi.org/10.1080/01621459.2016.1148612
  File ‘twoFiles.Rd’:
    https://doi.org/10.1080/01621459.2016.1148612
Maintainer: ‘Mark Clements <mark.clements@ki.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Linbo",
                      family = "Wang",
                      role = "aut"),
               person(given = "Mark",
                      family = "Clements",
                      role = c("aut", "cre"),
                      email = "mark.clements@ki.se"),
               person(given = "Thomas",
                      family = "Richardson",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Specified C++11: please drop specification unless essential
checkRd: (-1) assertall.Rd:45: Lost braces in \itemize; meant \describe ?
checkRd: (-1) assertall.Rd:46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) assertall.Rd:47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) assertall.Rd:48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) brmsmargins.Rd:129: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) brmsmargins.Rd:130: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) brmsmargins.Rd:131: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) brmsmargins.Rd:132: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) builders.Rd:50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) builders.Rd:51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) builders.Rd:52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) builders.Rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) builders.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) builders.Rd:55: Lost braces in \itemize; meant \describe ?
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  builders.Rd: make_standata, as_draws_df
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘brm_archetype_average_cells.Rd’ ‘brm_archetype_average_effects.Rd’
    ‘brm_archetype_cells.Rd’ ‘brm_archetype_effects.Rd’
    ‘brm_archetype_successive_cells.Rd’
    ‘brm_archetype_successive_effects.Rd’ ‘brm_formula.Rd’
    ‘brm_prior_archetype.Rd’ ‘brm_prior_label.Rd’ ‘brm_prior_template.Rd’
    ‘brm_recenter_nuisance.Rd’ ‘summary.brms_mmrm_archetype.Rd’
    ‘utils_archetype.R’
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  createBarPrior.Rd: fitCyclopsModel
  createFastBarPrior.Rd: fitCyclopsModel
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
stratify_keys 4.418  0.047    5.72
Author field differs from that derived from Authors@R
  Author:    ‘Ben Bolker [aut, cre] (<https://orcid.org/0000-0002-2127-0443>), David Robinson [aut], Dieter Menne [ctb], Jonah Gabry [ctb], Paul Buerkner [ctb], Christopher Hua [ctb], William Petry [ctb] (<https://orcid.org/0000-0002-5230-5987>), Joshua Wiley [ctb] (<https://orcid.org/0000-0002-0271-6702>), Patrick Kennedy [ctb], Eduard Szöcs [ctb] (<https://orcid.org/0000-0001-5376-1194>, BASF SE), Indrajeet Patil [ctb], Vincent Arel-Bundock [ctb] (<https://orcid.org/0000-0003-2042-7063>), Bill Denney [ctb], Cory Brunson [ctb], Joe Wasserman [ctb] (<https://orcid.org/0000-0002-9705-1853>), Alexey Stukalov [ctb], Matthieu Bruneaux [ctb]’
  Authors@R: ‘Ben Bolker [aut, cre] (ORCID: <https://orcid.org/0000-0002-2127-0443>), David Robinson [aut], Dieter Menne [ctb], Jonah Gabry [ctb], Paul Buerkner [ctb], Christopher Hua [ctb], William Petry [ctb] (ORCID: <https://orcid.org/0000-0002-5230-5987>), Joshua Wiley [ctb] (ORCID: <https://orcid.org/0000-0002-0271-6702>), Patrick Kennedy [ctb], Eduard Szöcs [ctb] (ORCID: <https://orcid.org/0000-0001-5376-1194>, sponsor: BASF SE), Indrajeet Patil [ctb], Vincent Arel-Bundock [ctb] (ORCID: <https://orcid.org/0000-0003-2042-7063>), Bill Denney [ctb], Cory Brunson [ctb], Joe Wasserman [ctb] (ORCID: <https://orcid.org/0000-0002-9705-1853>), Alexey Stukalov [ctb], Matthieu Bruneaux [ctb]’

  Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘glmm_tidiers.R’ ‘rstanarm_tidiers.Rd’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
mcmc_tidiers    5.782  0.148   7.375
glmmTMB_tidiers 4.920  0.107   5.319
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
tidy.poLCA   4.535  0.008   5.775
glance.poLCA 3.772  0.054   5.251
Maintainer: ‘Yan Zhao <yanzhao3@illinois.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Smruti",
                      family = "Padhy",
                      role = "aut"),
               person(given = "Rob",
                      family = "Kooper",
                      role = "aut"),
               person(given = "Yan",
                      family = "Zhao",
                      role = c("aut", "cre"),
                      email = "yanzhao3@illinois.edu"))
as necessary.
Maintainer: ‘Rahim Alhamzawi  (University of Al-Qadisiyah) <rahim.alhamzawi@qu.edu.iq>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rahim",
                    family = "Alhamzawi",
                    role = c("aut", "cre"),
                    email = "rahim.alhamzawi@qu.edu.iq")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘census2021.Rd’
Maintainer: ‘Joshua Ray Tanzer <jtanzer@lifespan.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Joshua", "Ray"),
                    family = "Tanzer",
                    role = c("aut", "cre"),
                    email = "jtanzer@lifespan.org")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
bcor     5.351  0.184   7.266
brxx_Cor 4.118  0.070   6.551
Maintainer: ‘Frank Schaarschmidt <schaarschmidt@biostat.uni-hannover.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Frank",
                    family = "Schaarschmidt",
                    role = c("aut", "cre"),
                    email = "schaarschmidt@biostat.uni-hannover.de")
as necessary.
Maintainer: ‘Ian Jonsen <ian.jonsen@mq.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Marco Giuliano <mgiuliano.mail@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marco",
                    family = "Giuliano",
                    role = c("aut", "cre"),
                    email = "mgiuliano.mail@gmail.com")
as necessary.
Maintainer: ‘Chanseok Park <statpnu@gmail.com>’

The Description field contains
  <arXiv:2308.10150>. This work was supported by the National Research
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Alireza S. Mahani <alireza.s.mahani@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Alireza", "S."),
                      family = "Mahani",
                      role = c("aut", "cre"),
                      email = "alireza.s.mahani@gmail.com"),
               person(given = c("Mansour", "T.A."),
                      family = "Sharabiani",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
crossval_bsgw 4.723      0   7.024
Maintainer: ‘Paola Rebora <paola.rebora@unimib.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Paola", "Rebora,Agus"),
                      family = "Salim",
                      role = "aut"),
               person(given = "Marie",
                      family = "Reilly",
                      role = "aut"),
               person(given = "Paola",
                      family = "Rebora",
                      role = "cre",
                      email = "paola.rebora@unimib.it"))
as necessary.
Maintainer: ‘Peter Solymos <psolymos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Solymos",
                    role = c("aut", "cre"),
                    email = "psolymos@gmail.com",
                    comment = c(ORCID = "0000-0001-7337-1740"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
tdgraph 4.498  0.203   6.828
Maintainer: ‘Leah F. South <l1.south@qut.edu.au>’

The Description field contains
  (2018) <arXiv:1809.05800>) is more robust to non-normal summary
  statistics. BSLmisspec (Frazier et al. 2019 <arXiv:1904.04551>)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Ernesto Barrios <ebarrios@itam.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ernesto", "Barrios", "based", "on", "Daniel", "Meyer's"),
                      family = "code.",
                      role = "aut"),
               person(given = "Ernesto",
                      family = "Barrios",
                      role = "cre",
                      email = "ebarrios@itam.mx"))
as necessary.
Maintainer: ‘Yanchao Liu <yanchaoliu@wayne.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yanchao",
                    family = "Liu",
                    role = c("aut", "cre"),
                    email = "yanchaoliu@wayne.edu")
as necessary.

The Description field contains
  Yanchao Liu (2022) <arXiv:2205.15263> for technical details. Source
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) bscontrol.Rd:39: Lost braces; missing escapes or markup?
    39 | \item{opt.solver}{a character string in the set {'enum', 'enum_c', 'gurobi', 'cplex', 'lpSolve', 'greedy'} indicating the optimization solver to be used in the program. The choice of 'cplex' requires the package \code{cplexAPI}, 'gurobi' requires the package \code{gurobi}, and 'lpSolve' requires the package \code{lpSolve}. These solver options are only available in the full version at \url{https://github.com/profyliu/bsnsing/}. The default (and the best) is 'enum_c'.}
       |                                                 ^
checkRd: (-1) bscontrol.Rd:45: Lost braces; missing escapes or markup?
    45 | \item{opt.model}{a character string in the set {'gini','error'} indicating the optimization model to solve in the program. The default is 'gini'. The 'error' option is not available in the current version.}
       |                                                ^
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
ROC_func 3.361  0.304   5.226
Maintainer: ‘Jorge Sicacha-Parada <jasicachap@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jorge",
                      family = "Sicacha-Parada",
                      role = c("aut", "cre"),
                      email = "jasicachap@unal.edu.co"),
               person(given = "Edilberto",
                      family = "Cepeda-Cuervo",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
hetero_general 7.101  0.291   9.090
hetero_sem     4.228  0.031   5.165
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
summary.bspcov 8.920  0.189  12.193
sbmspcov       8.900  0.204  11.994
bmspcov        4.449  0.135   6.707
Maintainer: ‘Christian Roever <christian.roever@med.uni-goettingen.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Matthew C. Edwards <matt.edwards@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Matthew", "C."),
                      family = "Edwards",
                      role = c("aut", "cre"),
                      email = "matt.edwards@auckland.ac.nz"),
               person(given = "Renate",
                      family = "Meyer",
                      role = "aut"),
               person(given = "Nelson",
                      family = "Christensen",
                      role = "aut"))
as necessary.

The Description field contains
  and Computing (2018). <doi.org/10.1007/s11222-017-9796-9>.
Please write DOIs as <doi:prefix/suffix>.
Maintainer: ‘Deborah Burr <burr@stat.ufl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Deborah",
                    family = "Burr",
                    role = c("aut", "cre"),
                    email = "burr@stat.ufl.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
run_mcmc                  7.919  0.060  10.242
predict.mcmc_output       4.521  0.079   6.734
as.data.frame.mcmc_output 4.497  0.012   5.701
ar1_ng                    4.165  0.018   5.259
Maintainer: ‘Rocio Paola Maehara <rp.maeharaa@up.edu.pe>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luis", "Benites"),
                      family = "Sanchez",
                      role = c("cre", "aut"),
                      email = "lbenitess@pucp.edu.pe"),
               person(given = c("Rocio", "Paola"),
                      family = "Maehara",
                      role = c("cre", "aut"),
                      email = "rp.maeharaa@up.edu.pe"),
               person(given = c("Paulo", "Jos<a9>", "Alejandro", "Aybar", "Flores"),
                      family = "<a.aybarf@alum.up.edu.pe>",
                      role = "ctb",
                      email = "a.aybarf@alum.up.edu.pe"))
as necessary.
Maintainer: ‘Sixing Hao <s.hao3@lse.ac.uk>’

The Description field contains
  (2022)<arXiv:2201.02023>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Phillip Murray <phillip.murray18@imperial.ac.uk>’

The Description field contains
  Pakkannen (2017) <arXiv:1507.03004v4>, as well as functions to fit BSS
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Timothy Conwell <timconwell@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Timothy",
                    family = "Conwell",
                    role = c("aut", "cre"),
                    email = "timconwell@gmail.com")
as necessary.
Maintainer: ‘Zhu Wang <zwang145@uthsc.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Steven L. Scott <steve.the.bayesian@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Steven", "L."),
                    family = "Scott",
                    role = c("aut", "cre"),
                    email = "steve.the.bayesian@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  add.dynamic.regression.Rd: SdPrior
  add.monthly.annual.cycle.Rd: zoo
  bsts.Rd: zoo
  descriptive-plots.Rd: zoo, yearmon
  mbsts.Rd: SpikeSlabPrior
  plot.bsts.mixed.Rd: TimeSeriesBoxplot
  to.posixt.Rd: yearmon
  wide.to.long.Rd: zoo
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
File ‘bsts/libs/bsts.so’:
  Found non-API call to R: ‘Rf_isFrame’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
add.monthly.annual.cycle 4.428  0.023   5.834
Maintainer: ‘Zuguang Gu <z.gu@dkfz.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zuguang",
                    family = "Gu",
                    role = c("aut", "cre"),
                    email = "z.gu@dkfz.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                                  user system elapsed
bsvars-package                                   5.158  0.022   6.141
summary.PosteriorBSVARSV                         4.966  0.000   6.412
compute_fitted_values.PosteriorBSVARSV           4.891  0.003   5.824
estimate.PosteriorBSVARSV                        4.879  0.003   6.282
compute_conditional_sd.PosteriorBSVARSV          4.868  0.012   6.518
estimate.BSVARSV                                 4.870  0.009   5.486
compute_structural_shocks.PosteriorBSVARSV       4.860  0.003   5.897
compute_impulse_responses.PosteriorBSVARSV       4.859  0.000   5.667
compute_variance_decompositions.PosteriorBSVARSV 4.842  0.000   5.338
forecast.PosteriorBSVARSV                        4.098  0.008   5.792
Maintainer: ‘Adam Bekhit <imbei@med-imbei.uni-saarland.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adam",
                      family = "Bekhit",
                      role = c("aut", "cre"),
                      email = "imbei@med-imbei.uni-saarland.de"),
               person(given = "Jakob",
                      family = "Schöpe",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Wagenpfeil",
                      role = "aut"))
as necessary.
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gunther",
                    family = "Schauberger",
                    role = c("aut", "cre"),
                    email = "gunther.schauberger@tum.de")
as necessary.
checkRd: (-1) terms.BTM.Rd:23-25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) terms.BTM.Rd:26-32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) terms.data.frame.Rd:25-31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) terms.data.frame.Rd:32-38: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
BTM 7.204  0.453   6.162
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  BT.Rd: rpart, rpart.control
  BT_Call.Rd: rpart.control
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Taiane Schaedler Prass <taianeprass@gmail.com>’

The Description field contains
  <doi:10.1111/sjos.12439> and Pumi et al. (2022) <arXiv:2211.02097>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) pnbd.mcmc.DrawParameters.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) pnbd.mcmc.DrawParameters.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  abe.mcmc.DrawParameters.Rd: mcmc.list
  pggg.mcmc.DrawParameters.Rd: mcmc.list
  pnbd.mcmc.DrawParameters.Rd: mcmc.list
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                                      user system elapsed
pggg.mcmc.DrawParameters             5.929  0.160   6.902
mcmc.Expectation                     5.174  0.251   2.836
mcmc.pmf                             4.935  0.300   2.813
pggg.plotRegularityRateHeterogeneity 4.406  0.041   5.145
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
dc.PlotLogLikelihoodContour 5.301  0.004       7
checkRd: (-1) bubbleHMLegends.Rd:42: Lost braces; missing escapes or markup?
    42 | function. If {sizeBreaks} vector is supplied then this will be ignored and
       |              ^
checkRd: (-1) bubbleHeatmap.Rd:96: Lost braces; missing escapes or markup?
    96 | function. If {sizeBreaks} vector is supplied then this will be ignored and
       |              ^
checkRd: (-1) multiPlotInput.Rd:117: Lost braces; missing escapes or markup?
   117 | \code{unitBase}. This will be supplied to pretty function. If {sizeBreaks} is
       |                                                               ^
Maintainer: ‘Ken Kelley <kkelley@nd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Samantha", "F."),
                      family = "Anderson",
                      role = "aut",
                      email = "samantha.f.anderson@asu.edu"),
               person(given = "Ken",
                      family = "Kelley",
                      role = c("aut", "cre"),
                      email = "kkelley@nd.edu"))
as necessary.
Maintainer: ‘Jiwoong Kim <jwboys26@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jiwoong",
                    family = "Kim",
                    role = c("aut", "cre"),
                    email = "jwboys26atgmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU time > 2.5 times elapsed time
             user system elapsed ratio
TrainBuddle 1.101  0.076   0.462 2.548
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
budgetIV 6.659  0.131   9.377
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
buildmer 4.995  0.034   6.572
Maintainer: ‘Zhu Wang <zwang145@uthsc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhu",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "https://orcid.org/0000-0002-0773-0052"),
               person(family = "others",
                      role = "aut",
                      comment = "see COPYRIGHTS"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
DEanalysis      6.160  0.358   8.203
jaccard_heatmap 5.151  0.101   6.088
Maintainer: ‘Joseph Rigdon <jrigdon@wakehealth.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Joseph",
                    family = "Rigdon",
                    role = c("aut", "cre"),
                    email = "jrigdon@wakehealth.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  read_excel_workbook.Rd: read_excel
  read_gsheets.Rd: read_sheet
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
detect_cp       4.573  0.116   6.378
runmcmc_cpall   4.363  0.004   5.088
get_grooves_bcp 4.164  0.028   5.324
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
pairwise_scores 5.75  0.051   6.897
Maintainer: ‘Marlene Marchena <marchenamarlene@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Marlene",
                    family = "Marchena",
                    role = c("aut", "cre"),
                    email = "marchenamarlene@gmail.com")
as necessary.

The Description field contains
  <arXiv:1009.3977>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Lerato E Magosi <magosil86@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  brkpt.Rd: glm.nb
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) kink_estimator.Rd:60: Escaped LaTeX specials: \$
Maintainer: ‘Philipp Ottolinger <philipp@ottolinger.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Philipp",
                    family = "Ottolinger",
                    role = c("aut", "cre"),
                    email = "philipp@ottolinger.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
bundle_caret 3.961  0.228   5.822
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  lifecycles.Rd: tibble
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Steven Malevich <sbmalev@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘get_data_from_bursa.R’ ‘list_data_names.R’
Maintainer: ‘Pat Burns <patrick@burns-stat.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Burns",
                      family = "Statistics",
                      role = "aut"),
               person(given = "Pat",
                      family = "Burns",
                      role = "cre",
                      email = "patrick@burns-stat.com"))
as necessary.
Maintainer: ‘Pat Burns <patrick@burns-stat.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pat",
                    family = "Burns",
                    role = c("aut", "cre"),
                    email = "patrick@burns-stat.com")
as necessary.
Maintainer: ‘Gnaneshwar G <gnaneshwar441@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gnaneshwar",
                    family = "G",
                    role = c("aut", "cre"),
                    email = "gnaneshwar441@gmail.com")
as necessary.
checkRd: (-1) depreciation-class.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) depreciation-class.Rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) depreciation-class.Rd:45: Lost braces in \itemize; meant \describe ?
checkRd: (-1) depreciation-class.Rd:46-47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) loan-class.Rd:46-48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) loan-class.Rd:49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) loan-class.Rd:50-51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) model2df-methods.Rd:32-33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) model2df-methods.Rd:34-35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) model2df-methods.Rd:36-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) model2df-methods.Rd:38-39: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
axe-ipred 10.516  0.178  16.694
axe-ksvm   7.222  0.029  11.343
axe-rda    4.740  0.000   7.482
axe-C5.0   3.701  0.188   5.651
Maintainer: ‘Yi Zhao <zhaoyi1026@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Yi", "Zhao", "Brian", "Caffo", "<bcaffo@gmail.com>", "Joshua", "Ewen"),
                      family = "<ewen@kennedykrieger.org>",
                      role = "aut",
                      email = "ewen@kennedykrieger.org"),
               person(given = "Yi",
                      family = "Zhao",
                      role = "cre",
                      email = "zhaoyi1026@gmail.com"))
as necessary.

The Description field contains
  <arXiv:1912.13084> for details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Fabian Krueger <Fabian.Krueger83@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Fabian",
                    family = "Krueger",
                    role = c("aut", "cre"),
                    email = "fabian.krueger83@gmail.com")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Franz X. Mohr [aut, cre] (0009-0003-8890-7781)’
  Authors@R: ‘Franz X. Mohr [aut, cre] (ORCiD: 0009-0003-8890-7781)’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bv_ggplot 4.105  0.024     5.2
Maintainer: ‘Katharine M. Mullen <katharine.mullen@stat.ucla.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Katharine", "M."),
                    family = "Mullen",
                    role = c("aut", "cre"),
                    email = "katharine.mullen@stat.ucla.edu")
as necessary.
Malformed Description field: should contain one or more complete sentences.
Maintainer: ‘Amir Nikooienejad <amir.nikooienejad@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Amir",
                      family = "Nikooienejad",
                      role = c("aut", "cre"),
                      email = "amir.nikooienejad@gmail.com"),
               person(given = c("Valen", "E."),
                      family = "Johnson",
                      role = "ths"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Seung Jun Shin <sjshin@korea.ac.kr>’

The Description field contains
  detection proposed by Shin et al. <arXiv:1812.10107>. The backward
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
'data(package=)' call not declared from: ‘NAM’
Maintainer: ‘Carlos Biagolini-Jr.<c.biagolini@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carlos",
                    family = "Biagolini-Jr.",
                    role = c("aut", "cre"),
                    email = "c.biagolini@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Hunyong Cho <hunyong.cho@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hunyong",
                      family = "Cho",
                      role = c("aut", "cre"),
                      email = "hunyong.cho@gmail.com"),
               person(given = "Chuwen",
                      family = "Liu",
                      role = "aut"),
               person(given = "Jinyoung",
                      family = "Park",
                      role = "aut"),
               person(given = "Di",
                      family = "Wu",
                      role = "aut"))
as necessary.
Maintainer: ‘Frederic Bertrand <frederic.bertrand@utt.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Sill",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Hielscher",
                      role = "aut"),
               person(given = "Manuela",
                      family = "Zucknick",
                      role = "aut"),
               person(given = "Natalia",
                      family = "Becker.",
                      role = "aut"),
               person(given = "Frederic",
                      family = "Bertrand",
                      role = "cre",
                      email = "frederic.bertrand@utt.fr"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  balancedFolds.Rd: EPSGO
  coef.intsearch.Rd: EPSGO
  plot.summary.int.Rd: EPSGO
  stabpath.Rd: glmnet
  summary.intsearch.Rd: EPSGO
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Thomas Wieland <thomas.wieland.kit@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Wieland",
                    role = c("aut", "cre"),
                    email = "thomas.wieland.kit@googlemail.com")
as necessary.
Maintainer: ‘Mitchell Lyons <mitchell.lyons@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘calculate_clustering_metrics.Rd’:
    \keyword{matrix,}
    \keyword{metrics,}
Maintainer: ‘Gokmen Altay <altayscience@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gokmen",
                      family = "Altay",
                      role = c("aut", "cre"),
                      email = "altayscience@gmail.com"),
               person(given = "Frank",
                      family = "Emmert-Streib",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
sigtestMTC 7.48  0.168   9.257
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
clusterforest 3.246  0.012   5.155
Maintainer: ‘Rosaria Lombardo <rosaria.lombardo@unicampania.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rosaria",
                      family = "Lombardo",
                      role = c("aut", "cre"),
                      email = "rosaria.lombardo@unicampania.it"),
               person(given = c("Eric", "J"),
                      family = "Beh",
                      role = "aut"),
               person(given = "Michel",
                      family = "van de Velden",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot.CA3variants 4.141  0.134   5.092
Maintainer: ‘Trevor Ringrose <t.j.ringrose@cranfield.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Trevor",
                    family = "Ringrose",
                    role = c("aut", "cre"),
                    email = "t.j.ringrose@cranfield.ac.uk")
as necessary.
Maintainer: ‘Junyao Jiang <jiangjunyao789@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Junyao",
                    family = "Jiang",
                    role = c("aut", "cre"),
                    email = "jiangjunyao789@163.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
Identify_ConservedMarkers   5.847  0.099   6.676
Identify_ConservedNetworks  5.418  0.075   6.383
Identify_ConservedCellTypes 4.507  0.055   5.072
Heatmap_Cor                 4.272  0.167   5.520
Format_Markers_Frac         3.734  0.110   5.009
Maintainer: ‘Quinn N. Lathrop <quinn.lathrop@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Quinn", "N."),
                    family = "Lathrop",
                    role = c("aut", "cre"),
                    email = "quinn.lathrop@gmail.com")
as necessary.
Maintainer: ‘Alex J. Cannon <alex.cannon@canada.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Alex", "J."),
                    family = "Cannon",
                    role = c("aut", "cre"),
                    email = "alex.cannon@canada.ca")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
cadence.fit 6.755  0.062   8.093
gam.style   5.144  0.026   7.764
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
CADF_to_migration_model 5.729  0.292   6.719
annualhalfingmodel      4.683  0.214   5.982
Maintainer: ‘Claudio Lupi <lupi@unimol.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Claudio",
                    family = "Lupi",
                    role = c("aut", "cre"),
                    email = "lupi@unimol.it")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
CoUMAP.plot 5.548  0.007   7.733
CoUMAP      4.748  0.027   6.833
Maintainer: ‘Simon Urbanek <Simon.Urbanek@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Urbanek",
                      role = c("aut", "cre"),
                      email = "Simon.Urbanek@r-project.org"),
               person(given = "Jeffrey",
                      family = "Horner",
                      role = "aut",
                      email = "jeff.horner@vanderbilt.edu"))
as necessary.
possible bashism in configure.ac line 36 (should be 'b = a'):
  if test "xx$CAIRO_LIBS" == "xx"; then
  possible bashism in configure.ac line 129 (should be 'b = a'):
  if test "xx${CAIRO_LIBS}" == "xx"; then
  possible bashism in configure.ac line 130 (should be 'b = a'):
     if test $uses_ats == "yes"; then
  possible bashism in configure.ac line 214 (test -a/-o):
       if test -z "${FCI}" -a -e "${pre}/include/fontconfig/fontconfig.h"; then
  possible bashism in configure.ac line 218 (test -a/-o):
       if test -z "${FTI}" -a -e "${pre}/include/freetype2/freetype/freetype.h"; then
  possible bashism in configure.ac line 227 (test -a/-o):
     if test -z "${FCI}" -a -z "${FTI}"; then
File ‘Cairo/libs/Cairo.so’:
  Found non-API calls to R: ‘EXTPTR_PTR’, ‘Rf_GetOption’, ‘Rf_gsetVar’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Felipe Campelo <fcampelo@gmail.com>’

The Description field contains
  <arxiv:1908.01720>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
run_experiment 7.015  0.047   8.974
calc_nreps     3.773  0.138   5.455
Maintainer: ‘Alan Gu <alan.on.ca@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alan",
                    family = "Gu",
                    role = c("aut", "cre"),
                    email = "alan.on.ca@gmail.com")
as necessary.
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Maintainer: ‘Stephen Froehlich <stephen.froehlich@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stephen",
                    family = "Froehlich",
                    role = c("aut", "cre"),
                    email = "stephen.froehlich@gmail.com")
as necessary.
checkRd: (-1) calcUnique.Rd:24: Lost braces
    24 | functions, and often the /code{cut()} function are relatively slow when working with tens of millions of rows or more.
       |                               ^
Maintainer: ‘John Ford <JoRuFo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stephanie",
                      family = "Lane",
                      role = c("aut", "cre")),
               person(given = "John",
                      family = "Ford",
                      role = c("aut", "cre"),
                      email = "jorufo@gmail.com"),
               person(given = "Clark",
                      family = "Jeffries",
                      role = "aut"),
               person(given = "Diana",
                      family = "Perkins",
                      role = "aut"))
as necessary.
Maintainer: ‘Anoop Shah <anoop@doctors.org.uk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘internal_calib_aj.R’ ‘internal_calib_pv.R’
    ‘internal_extract_ids_states.R’ ‘plot.calib_mlr.Rd’ ‘plot_calib.R’
    ‘weights.R’
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot.calib_mlr 5.968  0.089   7.332
plot.calib_msm 4.946  0.043   5.654
Maintainer: ‘Chih-Li Sung <iamdfchile@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chih-Li",
                    family = "Sung",
                    role = c("aut", "cre"),
                    email = "iamdfchile@gmail.com")
as necessary.

The Description field contains
  <arXiv:1806.01453>. This calibration method is particularly useful when
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
cv.KLR 4.634      0   6.024
KLR    4.013      0   5.216
Maintainer: ‘Jan Graffelman <jan.graffelman@upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jan",
                    family = "Graffelman",
                    role = c("aut", "cre"),
                    email = "jan.graffelman@upc.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Oyvind Langsrud <oyl@ssb.no>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Øyvind",
                      family = "Langsrud",
                      role = "aut"),
               person(given = "Oyvind",
                      family = "Langsrud",
                      role = "cre",
                      email = "oyl@ssb.no"))
as necessary.
Maintainer: ‘Marius Puke <marius.puke@uni-hohenheim.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  <arXiv:2203.04065>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) calibration_bands.Rd:19: Lost braces; missing escapes or markup?
    19 | \item{y}{response variable (in {0,1}).}
       |                                ^
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
plot.calibrationband 3.428  0.063   5.217
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Dominik Heider <heiderd@mathematik.uni-marburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Johanna",
                      family = "Schwarz",
                      role = "aut"),
               person(given = "Dominik",
                      family = "Heider",
                      role = c("aut", "cre"),
                      email = "heiderd@mathematik.uni-marburg.de"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
calibrate         0.270  0.015   5.293
predict_calibratR 0.014  0.004   5.072
Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) Recording.Rd:112: Lost braces; missing escapes or markup?
   112 | Stop recording images with {camcorder}.
       |                            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  BuildGeneSets.Rd: edgeR, org.Hs.eg.db, org.Mm.eg.db
  CAMML.Rd: vamForSeurat
  ChIMP.Rd: vamForSeurat
  GetGeneSets.Rd: org.Hs.eg.db, org.Mm.eg.db
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
BuildGeneSets  5.855  0.222   7.269
CAMML          5.199  0.206   6.553
ChIMP          4.528  0.152   5.842
GetCAMMLLabels 4.530  0.049   6.244
Maintainer: ‘Lukas Lundstrom <lukas.rokka@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Author field differs from that derived from Authors@R
  Author:    ‘Peter Desmet [aut, cre] (<https://orcid.org/0000-0002-8442-8025>, Research Institute for Nature and Forest (INBO)), Sanne Govaert [aut] (<https://orcid.org/0000-0002-8939-1305>, Research Institute for Nature and Forest (INBO)), Pieter Huybrechts [aut] (<https://orcid.org/0000-0002-6658-6062>, Research Institute for Nature and Forest (INBO)), Damiano Oldoni [aut] (<https://orcid.org/0000-0003-3445-7562>, Research Institute for Nature and Forest (INBO)), Research Institute for Nature and Forest (INBO) [cph] (https://www.vlaanderen.be/inbo/en-gb/), LifeWatch Belgium [fnd] (https://lifewatch.be)’
  Authors@R: ‘Peter Desmet [aut, cre] (ORCID: <https://orcid.org/0000-0002-8442-8025>, affiliation: Research Institute for Nature and Forest (INBO)), Sanne Govaert [aut] (ORCID: <https://orcid.org/0000-0002-8939-1305>, affiliation: Research Institute for Nature and Forest (INBO)), Pieter Huybrechts [aut] (ORCID: <https://orcid.org/0000-0002-6658-6062>, affiliation: Research Institute for Nature and Forest (INBO)), Damiano Oldoni [aut] (ORCID: <https://orcid.org/0000-0003-3445-7562>, affiliation: Research Institute for Nature and Forest (INBO)), Research Institute for Nature and Forest (INBO) [cph] (https://www.vlaanderen.be/inbo/en-gb/), LifeWatch Belgium [fnd] (https://lifewatch.be)’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
check_camtrapdp 1.893  0.105   8.133
read_camtrapdp  1.297  0.097   5.148
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot_coef-commOccu-method.Rd: fit
  plot_effects-commOccu-method.Rd: fit
  predict-commOccu-method.Rd: fit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
detectionHistory        5.958  0.142   7.094
spatialDetectionHistory 5.929  0.069   7.379
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘wds.R’
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Audrey", "Qiuyan"),
                      family = "Fu",
                      role = "aut"),
               person(given = "Xiaoyue",
                      family = "Wang",
                      role = "aut"),
               person(given = c("Audrey", "Q."),
                      family = "Fu",
                      role = "cre",
                      email = "audreyqyfu@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                  user system elapsed
testMutationalPatternAll.wrapper 5.579  0.060   7.299
computeSmallWorldness            4.977  0.136   7.037
Maintainer: ‘Michal Burdukiewicz <michalburdukiewicz@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
CorrectBatch   5.480  0.098   8.114
CorrectBatches 4.606  0.085   5.992
Maintainer: ‘Yuchao Jiang <yuchaoj@email.unc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuchao",
                      family = "Jiang",
                      role = c("aut", "cre"),
                      email = "yuchaoj@email.unc.edu"),
               person(given = c("Nancy", "R."),
                      family = "Zhang",
                      role = "aut"))
as necessary.
Found the following files/directories:
  ‘MDA231_tree.pdf’
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
CLES 6.178  0.874   8.751
checkRd: (-1) macrocaic.Rd:31: Lost braces; missing escapes or markup?
    31 |      {RRD = ln(N_1/N_2)}
       |      ^
checkRd: (-1) macrocaic.Rd:34: Lost braces; missing escapes or markup?
    34 |      {PDI = (N_1/(N_1 + N_2))-0.5}
       |      ^
checkRd: (-1) pd.calc.Rd:33: Lost braces
    33 |   \item{Length of tip branch lengths (TIPS)}{Length of tip branch lengths (TIPS)}{Unlike UEH, this measure does not use the unique paths to each tips on the \strong{subtree} and instead gives the sum of the unique branches leading to the tips on the \strong{complete tree}.}
       |                                                                                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  comparative.data.Rd: reorder.phylo
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
pgls 4.282  0.017   5.425
Maintainer: ‘John T. Buynak <jbuynak94@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "T."),
                    family = "Buynak",
                    role = c("aut", "cre"),
                    email = "jbuynak94@gmail.com")
as necessary.
Maintainer: ‘Joel Barnes <j@barnzilla.ca>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Oswaldo Santos Baquero <baquero@usp.br>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CalculateGlobalSens.Rd: sensRange
  CalculateLocalSens.Rd: sensFun, sensRange
  DesignSurvey.Rd: svydesign
  PlotLocalSens.Rd: element_text
  SetRanges.Rd: sensRange
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
'library' or 'require' call not declared from: ‘deSolve’
Maintainer: ‘Gaurav Sood <gsood07@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    captr .1.4
    captr .1.3
    captr .1.2
Maintainer: ‘Vincent Brault <vincent.brault@agroparistech.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sylvain",
                      family = "Arlot",
                      role = "aut"),
               person(given = "Vincent",
                      family = "Brault",
                      role = c("aut", "cre"),
                      email = "vincent.brault@agroparistech.fr"),
               person(given = "Jean-Patrick",
                      family = "Baudry",
                      role = "aut"),
               person(given = "Cathy",
                      family = "Maugis",
                      role = "aut"),
               person(given = "Bertrand",
                      family = "Michel",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘do_la.Rd’ ‘linalg.Rd’ ‘scale_matrix.Rd’ ‘solve.caracas_symbol.Rd’
    ‘solve_lin.Rd’
Maintainer: ‘Duncan Lee <Duncan.Lee@glasgow.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Duncan",
                    family = "Lee",
                    role = c("aut", "cre"),
                    email = "duncan.lee@glasgow.ac.uk")
as necessary.
Maintainer: ‘Duncan Lee <Duncan.Lee@glasgow.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Duncan",
                    family = "Lee",
                    role = c("aut", "cre"),
                    email = "duncan.lee@glasgow.ac.uk")
as necessary.
Maintainer: ‘Duncan Lee <Duncan.Lee@glasgow.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Duncan",
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "duncan.lee@glasgow.ac.uk"),
               person(given = "Alastair",
                      family = "Rushworth",
                      role = "aut"),
               person(given = "Gary",
                      family = "Napier",
                      role = "aut"),
               person(given = "William",
                      family = "Pettersson",
                      role = "aut"))
as necessary.
Maintainer: ‘Fraenzi Korner-Nievergelt <fraenzi.korner@oikostat.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fraenzi",
                      family = "Korner-Nievergelt",
                      role = c("aut", "cre"),
                      email = "fraenzi.korner@oikostat.ch"),
               person(given = "Ivo",
                      family = "Niermann",
                      role = "aut"),
               person(given = "Oliver",
                      family = "Behr",
                      role = "aut"),
               person(given = c("Matthew", "A."),
                      family = "Etterson",
                      role = "aut"),
               person(given = "Robert",
                      family = "Brinkmann",
                      role = "aut"),
               person(given = "Pius",
                      family = "Korner",
                      role = "aut"),
               person(given = "Barbara",
                      family = "Hellriegel",
                      role = "aut"),
               person(given = "Tobias",
                      family = "Roth",
                      role = "aut"),
               person(given = c("Manuela", "M.", "P."),
                      family = "Huso",
                      role = "aut"),
               person(given = "Dan",
                      family = "Dalthorp",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  persistence.prob.Rd: coxph, survreg
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Oleg Nenadic <onenadi@uni-goettingen.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) plot.ca.rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ca.rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ca.rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ca.rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.mjca.rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.mjca.rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.mjca.rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.mjca.rd:66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) States.Rd:48: Escaped LaTeX specials: \$
checkRd: (-1) fitweibull.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitweibull.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fitweibull.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘cosinor-constructor.R’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
ggcosinor        6.238  0.246   8.953
cosinor_features 5.015  0.125   6.447
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
plot.c4c_co2_result     6.212  0.016   9.381
fuel_and_co2_evaluation 5.520  0.056   6.780
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Verena",
                      family = "Zuber",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Maintainer: ‘Hyungsuk Tak <hyungsuk.tak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hyungsuk",
                      family = "Tak",
                      role = c("aut", "cre"),
                      email = "hyungsuk.tak@gmail.com"),
               person(given = "Henghsiu",
                      family = "Tsai",
                      role = "aut"),
               person(given = "Kisung",
                      family = "You",
                      role = "aut"))
as necessary.
checkRd: (-1) build_for_cran.Rd:13: Lost braces
    13 | The exit status code{R CMD build}, invisibly.
       |                     ^
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Stéphane",
                    family = "Laurent",
                    role = c("aut", "cre"),
                    email = "laurent_step@outlook.fr")
as necessary.
Maintainer: ‘Ziyi Li <zli16@mdanderson.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ziyi",
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "zli16@mdanderson.org")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
influence-mixed-models 7.113  0.070  10.435
ScatterplotSmoothers   4.080  0.139   6.362
Maintainer: ‘Thomas Welchowski <welchow@imbie.meb.uni-bonn.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Welchowski",
                    role = c("aut", "cre"),
                    email = "welchow@imbie.meb.uni-bonn.de")
as necessary.

The Description field contains
  <arXiv:1802.08178>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
File ‘cartographer/libs/cartographer.so’:
  Found non-API call to R: ‘PRVALUE’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘cartographr.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dotDensityLayer.Rd: st_sample
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
getPngLayer 9.643   0.19   15.42
Maintainer: ‘Frederic Bertrand <frederic.bertrand@utt.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Frederic Bertrand <frederic.bertrand@utt.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Yaofang Hu <yaofangh@smu.edu>’

The Description field contains
  Wang (2022) <arXiv:2306.15616>.  In addition to CASCORE, this package
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
claimFitting-methods 5.62  0.208   7.327
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘CBRBase.R’ ‘RFModel.R’ ‘RegressionModel.R’ ‘distance.R’
    ‘generate_grid.R’ ‘utils.R’
Maintainer: ‘Rich Nielsen <rnielsen@mit.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rich",
                    family = "Nielsen",
                    role = c("aut", "cre"),
                    email = "rnielsen@mit.edu")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
ComputeCI 5.642  0.256   9.295
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
sc_skinny    7.111  0.020   8.038
sc_convex    6.902  0.008   7.858
sc_striated2 6.732  0.076   7.510
calc_scags   6.213  0.344   6.932
top_scags    5.757  0.167   6.359
top_pairs    5.714  0.195   5.924
sc_clumpy_r  5.792  0.078   6.526
sc_clumpy    4.975  0.104   5.495
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
capture_diversity.VCF 4.394  0.038    6.15
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
summary_c2c    4.821  0.182   7.317
cat_apply_freq 2.850  0.860   5.299
Maintainer: ‘Yuqing Pan <yuqing.pan@stat.fsu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuqing",
                      family = "Pan",
                      role = c("aut", "cre"),
                      email = "yuqing.pan@stat.fsu.edu"),
               person(given = "Qing",
                      family = "Mai",
                      role = "aut",
                      email = "mai@stat.fsu.edu"),
               person(given = "Xin",
                      family = "Zhang",
                      role = "aut",
                      email = "henry@stat.fsu.edu"))
as necessary.

The Description field contains
  (2018) <arXiv:1805.04421>. The low-dimensional covariates and the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Masami Saga <msaga@mtb.biglobe.ne.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("The", "Institute", "of", "Statistical"),
                      family = "Mathematics",
                      role = "aut"),
               person(given = "Masami",
                      family = "Saga",
                      role = "cre",
                      email = "msaga@mtb.biglobe.ne.jp"))
as necessary.
Maintainer: ‘Charles J. Geyer <charlie@stat.umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alan",
                      family = "Agesti",
                      role = "aut",
                      email = "aa@stat.ufl.edu"),
               person(given = c("Charles", "J."),
                      family = "Geyer",
                      role = "cre",
                      email = "charlie@stat.umn.edu"))
as necessary.
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gunther",
                      family = "Schauberger",
                      role = c("aut", "cre"),
                      email = "gunther.schauberger@tum.de"),
               person(given = "Gerhard",
                      family = "Tutz",
                      role = "aut"))
as necessary.
Maintainer: ‘Ruben H. Roa-Ureta <ruben.roa.ureta@mail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Ruben", "H."),
                    family = "Roa-Ureta",
                    role = c("aut", "cre"),
                    email = "ruben.roa.ureta@mail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Juraj Szitas <szitas.juraj13@gmail.com>’

The Description field contains
  Hadad, Athey, Wager (2019) <arXiv:1908.09874>, particularly their mean,
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘nl zhang <setseed2016@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "nl",
                    family = "zhang",
                    role = c("aut", "cre"),
                    email = "setseed2016@gmail.com")
as necessary.
Maintainer: ‘Nick Williams <ntwilliams.personal@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Williams",
                    role = c("aut", "cre"),
                    email = "ntwilliams.personal@gmail.com")
as necessary.
Maintainer: ‘Adrien Taudiere <adrien.taudiere@tutanota.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) catmapdata.Rd:9-14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:14-15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:15-16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:16-17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:17-18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:18-19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:19-20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) catmapdata.Rd:20-21: Lost braces in \itemize; meant \describe ?
Found the following files/directories:
  ‘catmapdata.fixed.effects.plot.pdf’ ‘catmapdata.funnel.plot.pdf’
  ‘catmapdata.output.txt’ ‘catmapdata.random.effects.plot.pdf’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  catpredi.Rd: mgcv
  catpredi.survival.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
comp.cutpoints.survival 5.103  0.024   7.263
comp.cutpoints          4.076  0.021   5.385
Maintainer: ‘Fernando Tusell <fernando.tusell@ehu.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ported", "to", "R", "by", "Ted"),
                      family = "Harding",
                      role = "aut"),
               person(given = c("Fernando", "Tusell.", "Original", "by", "Joseph", "L."),
                      family = "Schafer.",
                      role = "aut",
                      email = "jls@stat.psu.edu"),
               person(given = "Fernando",
                      family = "Tusell",
                      role = "cre",
                      email = "fernando.tusell@ehu.es"))
as necessary.
Specified C++14: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
CorrelatedDesignMatrix 4.396  0.004   5.709
UniformDesignMatrix    4.282  0.012   5.320
Maintainer: ‘Cheng Hua <chuabest@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Magis",
                      role = "aut",
                      comment = "U Liege, Belgium"),
               person(given = "Gilles",
                      family = "Raiche",
                      role = "aut",
                      comment = "UQAM, Canada"),
               person(given = c("Juan", "Ramon"),
                      family = "Barrada",
                      role = "aut",
                      comment = "U Zaragoza, Spain"),
               person(given = "Cheng",
                      family = "Hua",
                      role = "cre",
                      email = "chuabest@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
fullDist 5.102  0.026   8.913
eapEst   3.456  0.065   5.990
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
catmssim_2d 5.143  0.105   7.888
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
trial_ocs 8.553   0.16  11.323
Specified C++11: please drop specification unless essential
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘CATT.Rd’:
    \keyword{Cochran-Armitage; Trend Test}
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
hdi.ancestralCauchy 6.966  0.007   8.509
Maintainer: ‘Suyeon Kang <skang062@ucr.edu>’

The Description field contains
  <arXiv:2109.06940>. This package allows researchers to use the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
mmi 5.973  0.070   7.280
smi 5.821  0.029   8.141
checkRd: (-1) tpcExample.Rd:30: Escaped LaTeX specials: \&
Maintainer: ‘Kevin Quinn <kmq@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Adam",
                      family = "Glynn",
                      role = "aut",
                      email = "adam.glynn@emory.edu"),
               person(given = "Kevin",
                      family = "Quinn",
                      role = c("aut", "cre"),
                      email = "kmq@umich.edu"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Naeem Khoshnevis [aut, cre] (<https://orcid.org/0000-0003-4315-1426>, Kempner), Xiao Wu [aut] (<https://orcid.org/0000-0002-4884-657X>, CUMC), Danielle Braun [aut] (<https://orcid.org/0000-0002-5177-8598>, HSPH)’
  Authors@R: ‘Naeem Khoshnevis [aut, cre] (ORCID: <https://orcid.org/0000-0003-4315-1426>, AFFILIATION: Kempner), Xiao Wu [aut] (ORCID: <https://orcid.org/0000-0002-4884-657X>, AFFILIATION: CUMC), Danielle Braun [aut] (ORCID: <https://orcid.org/0000-0002-5177-8598>, AFFILIATION: HSPH)’
Maintainer: ‘Alain Hauser <alhauser@google.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Kay", "H."),
                      family = "Brodersen",
                      role = "aut",
                      email = "kbrodersen@google.com"),
               person(given = "Alain",
                      family = "Hauser",
                      role = c("aut", "cre"),
                      email = "alhauser@google.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘Fiammetta Menchetti <fiammetta.menchetti@gmail.com>’

The Description field contains
  (MBSTS) as described in Menchetti & Bojinov (2020) <arXiv:2006.12269>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) as.mbsts.Rd:71: Lost braces; missing escapes or markup?
    71 |   \item{states.samples}{(\code{niter}- \code{burn}) draws from p(alpha_t | Y_{1:T}).}
       |                                                                              ^
checkRd: (-1) mcmc.Rd:61: Lost braces; missing escapes or markup?
    61 |   \item{states.samples}{(\code{niter}- \code{burn}) draws from p(alpha_t | Y_{1:T}).}
       |                                                                              ^
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot.CausalMBSTS 5.515  0.033   8.777
CausalMBSTS      5.073  0.074   6.121
predict.mbsts    3.863  0.003   5.060
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘causal-model.R’ ‘check-linearity.R’ ‘deprecated.R’
    ‘translation-modules.R’ ‘utils.R’
Maintainer: ‘Eric Dunipace <edunipace@mail.harvard.edu>’

The Description field contains
  Dunipace, Eric (2021) <arXiv:2109.01991>.  The package will build the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cotOOP.R’ ‘utils.R’
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
update_model 4.272  0.036    5.26
Maintainer: ‘Matthew Blackwell <mblackwell@gov.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Blackwell",
                    role = c("aut", "cre"),
                    email = "mblackwell@gov.harvard.edu.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  causalSLSE.Rd: vcovHC.default
  extract-causalslse-method.Rd: extract, texreg
  extract-slseFit-method.Rd: extract, texreg
  predict.Rd: vcovHC.default
  summary.Rd: vcovHC.default
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Giovanna Capizzi <giovanna.capizzi@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giovanna",
                      family = "Capizzi",
                      role = c("aut", "cre"),
                      email = "giovanna.capizzi@unipd.it"),
               person(given = "Guido",
                      family = "Masarotto",
                      role = "aut"))
as necessary.
Maintainer: ‘Rosaria Lombardo  <rosaria.lombardo@unicampania.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rosaria",
                      family = "Lombardo",
                      role = c("aut", "cre"),
                      email = "rosaria.lombardo@unicampania.it"),
               person(given = c("Eric", "J"),
                      family = "Beh",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Zhongheng Zhang <zh_zhang1984@zju.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhongheng",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zh_zhang1984@zju.edu.cn"),
               person(given = c("Sir", "Run", "Run", "Shaw"),
                      family = "hospital",
                      role = "aut"),
               person(given = c("Zhejiang", "university", "school", "of"),
                      family = "medicine",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘CBCgrps2.6-package.Rd’:
    \keyword{ bivariate analysis; statisitcal descript [TRUNCATED]
Maintainer: ‘Dan Dalthorp <ddalthorp@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dan",
                    family = "Dalthorp",
                    role = c("aut", "cre"),
                    email = "ddalthorp@protonmail.com")
as necessary.

The Description field contains
  (2013) <arXiv:1303.5990>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘David Watson <david.s.watson11@gmail.com>’

The Description field contains
  details, see Watson & Silva (2022) <arXiv:2205.05715>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
bipartite 6.185  0.282   7.842
cbl       6.095  0.077   8.328
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
networkMA 4.722  0.008   5.141
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cbs_add_statcode_column.Rd’ ‘cbs_add_unit_column.Rd’
    ‘cbs_get_maps.Rd’ ‘cbs_get_sf.R’ ‘cbs_get_sf.Rd’
    ‘cbs_join_sf_with_data.Rd’
Maintainer: ‘Shouri Hu <e0054325@u.nus.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Hock", "Peng"),
                      family = "Chan",
                      role = "aut"),
               person(given = "Shouri",
                      family = "Hu",
                      role = c("aut", "cre"),
                      email = "e0054325@u.nus.edu"))
as necessary.

The Description field contains
  and Shouri Hu (2018) <arXiv:1805.11793>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
create_CircularArrow 6.417  0.012   7.493
Maintainer: ‘Sébastien Déjean <sebastien.dejean@math.univ-toulouse.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ignacio",
                      family = "González",
                      role = "aut"),
               person(given = "Sébastien",
                      family = "Déjean",
                      role = c("aut", "cre"),
                      email = "sebastien.dejean@math.univ-toulouse.fr"))
as necessary.
Maintainer: ‘David J. Marchette <dmarchette@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("David", "J."),
                    family = "Marchette",
                    role = c("aut", "cre"),
                    email = "dmarchette@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Rcpp_CONEC-class.Rd: C++Object-class
  Rcpp_CPS-class.Rd: C++Object-class
  Rcpp_CTRL-class.Rd: C++Object-class
  Rcpp_DCP-class.Rd: C++Object-class
  Rcpp_DLP-class.Rd: C++Object-class
  Rcpp_DNL-class.Rd: C++Object-class
  Rcpp_DQP-class.Rd: C++Object-class
  Rcpp_PDV-class.Rd: C++Object-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
cccUst 6.266  0.076   7.814
Maintainer: ‘Solt Kovacs <ccda@caesar.elte.hu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Solt",
                      family = "Kovacs",
                      role = c("aut", "cre"),
                      email = "ccda@caesar.elte.hu"),
               person(given = "Jozsef",
                      family = "Kovacs",
                      role = "aut"),
               person(given = "Peter",
                      family = "Tanos",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
ccda.main        4.171  0.080   5.602
plotccda.q95     4.003  0.004   5.298
plotccda.cluster 3.974  0.001   5.443
Maintainer: ‘Andreas Anastasiou <anastasiou.andreas@ucy.ac.cy>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
getCCM 7.396  0.161  10.143
Maintainer: ‘Michael B. Sohn <msohn@mail.med.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "B."),
                    family = "Sohn",
                    role = c("aut", "cre"),
                    email = "msohn@mail.med.upenn.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
ccmm 4.076  0.111    6.15
Maintainer: ‘Garrett M. Dancik <dancikg@easternct.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Garrett", "M."),
                      family = "Dancik",
                      role = c("aut", "cre"),
                      email = "dancikg@easternct.edu"),
               person(given = "Yuanbin",
                      family = "Ru",
                      role = "aut"))
as necessary.
Maintainer: ‘Uwe Menzel <uwemenzel@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Uwe",
                    family = "Menzel",
                    role = c("aut", "cre"),
                    email = "uwemenzel@gmail.com")
as necessary.
Maintainer: ‘W.John Braun <john.braun@ubc.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "W.J.",
                      family = "Braun",
                      role = "aut"),
               person(given = "W.John",
                      family = "Braun",
                      role = "cre",
                      email = "john.braun@ubc.ca"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
CCSRfind 1.561  2.774    5.66
Maintainer: ‘Abhibhav Sharma <mail.abhibhav@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abhibhav",
                    family = "Sharma",
                    role = c("aut", "cre"),
                    email = "mail.abhibhav@gmail.com")
as necessary.
checkRd: (-1) CUR.Rd:25: Lost braces; missing escapes or markup?
    25 | The number of low-dimension of C (J1 < {N,M}).
       |                                        ^
checkRd: (-1) CUR.Rd:29: Lost braces; missing escapes or markup?
    29 | The number of low-dimension of R (J2 < {N,M}).
       |                                        ^
checkRd: (-1) CX.Rd:23: Lost braces; missing escapes or markup?
    23 | The number of low-dimension (J < {N,M}).
       |                                  ^
Maintainer: ‘Yonghui Dong <yonghui.dong@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yonghui",
                    family = "Dong",
                    role = c("aut", "cre"),
                    email = "yonghui.dong@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
LR.2step 4.919  0.215   6.141
cdcat    1.151  0.057   7.599
Maintainer: ‘Mathieu Vrac <mathieu.vrac@lsce.ipsl.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mathieu",
                      family = "Vrac",
                      role = c("aut", "cre"),
                      email = "mathieu.vrac@lsce.ipsl.fr"),
               person(given = "Paul-Antoine",
                      family = "Michelangeli",
                      role = "aut",
                      email = "pam@climpact.com"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Ang Yu [aut, cre, cph] (<https://ang-yu.github.io/>, <https://orcid.org/0000-0002-1828-0165>)’
  Authors@R: ‘Ang Yu [aut, cre, cph] (website: <https://ang-yu.github.io/>, ORCID: <https://orcid.org/0000-0002-1828-0165>)’
Maintainer: ‘Alicja Wolny-Dominiak <woali@ue.katowice.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Peter",
                      family = "Adamic",
                      role = "aut"),
               person(given = "Alicja",
                      family = "Wolny-Dominiak",
                      role = c("aut", "cre"),
                      email = "woali@ue.katowice.pl"))
as necessary.
Maintainer: ‘Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alexander",
                      family = "Robitzsch",
                      role = c("aut", "cre"),
                      email = "robitzsch@ipn.uni-kiel.de"),
               person(given = "Thomas",
                      family = "Kiefer",
                      role = "aut"),
               person(given = c("Ann", "Cathrice"),
                      family = "George",
                      role = "aut"),
               person(given = "Ali",
                      family = "Uenlue",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) data.dtmr.Rd:57: Lost braces; missing escapes or markup?
    57 | \code{RU}: {Referent units}
       |            ^
checkRd: (-1) data.dtmr.Rd:59: Lost braces; missing escapes or markup?
    59 | \code{PI}: {Partitioning and iterating attribute}
       |            ^
checkRd: (-1) data.dtmr.Rd:61: Lost braces; missing escapes or markup?
    61 | \code{APP}: {Appropriateness attribute}
       |             ^
checkRd: (-1) data.dtmr.Rd:63: Lost braces; missing escapes or markup?
    63 | \code{MC}: {Multiplicative Comparison attribute}
       |            ^
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
estQ 4.439  0.249   5.587
paK  4.473  0.059   5.285
valQ 3.596  0.156   5.086
Maintainer: ‘Philippe Massicotte <pm@bios.au.dk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Norm Matloff <normmatloff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Norm",
                      family = "Matloff",
                      role = c("aut", "cre"),
                      email = "normmatloff@gmail.com"),
               person(given = "Vincent",
                      family = "Yang",
                      role = "aut",
                      email = "vinyang@ucdavis.edu"),
               person(given = "Harrison",
                      family = "Nguyen",
                      role = "aut",
                      email = "hhnguy@ucdavis.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
cds 4.041  0.046    5.42
Maintainer: ‘Emanuele Bevacqua <emanuele.bevacqua@uni-graz.at>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘atp_plot.Rd’ ‘bioscope_plot.Rd’ ‘energetics_lme_summary.Rd’
    ‘energetics_ols_summary.Rd’ ‘fit_lme.Rd’ ‘get_energetics.Rd’
    ‘get_energetics_summary.Rd’ ‘get_rate_summary.Rd’
    ‘make_bioscope_plot.Rd’ ‘normalize.Rd’ ‘partition_data.Rd’
    ‘pipelines.r’ ‘rate_plot.R’ ‘rate_plot.Rd’ ‘rates_lme_summary.Rd’
    ‘read_data.Rd’
Found the following files/directories:
  ‘figure01ceg.pdf’ ‘figure02ceg.pdf’ ‘staged.tree.graph.pdf’
  ‘stratified-event-tree-plot.pdf’
Maintainer: ‘Aaron Robotham <aaron.robotham@uwa.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aaron",
                    family = "Robotham",
                    role = c("aut", "cre"),
                    email = "aaron.robotham@uwa.edu.au")
as necessary.
Maintainer: ‘David Molnar <dmolnar100@icloud.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Molnar",
                    role = c("aut", "cre"),
                    email = "dmolnar100@icloud.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
aggregate.tracks 8.422  0.007   9.985
distanceToPlane  4.925  0.011   5.982
angleToPlane     4.870  0.004   5.049
angleToPoint     4.456  0.000   5.135
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ca_functions.r’ ‘plot.cellular_automata.Rd’
Maintainer: ‘Katharine M. Mullen <katharine.mullen@stat.ucla.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Katharine", "M."),
                      family = "Mullen",
                      role = c("aut", "cre"),
                      email = "katharine.mullen@stat.ucla.edu"),
               person(given = "Michael",
                      family = "Halter",
                      role = "aut"),
               person(given = "John",
                      family = "Lu",
                      role = "aut"),
               person(given = "Nathan",
                      family = "Dodder",
                      role = "aut"))
as necessary.
Maintainer: ‘Jakob Raymaekers <jakob.raymaekers@kuleuven.be>’

The Description field contains
  (open access), Raymaekers and Rousseeuw (2022) <arXiv:2207.13493> (open
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Andre Fujita <andrefujita@usp.br>’

The Description field contains
  structures (Relvas C. & Fujita A., (2020) <arXiv:2004.02333>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
CenBAR 7.644  0.001  10.285
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
tobit1 4.794  0.086    6.57
Maintainer: ‘Sy Han (Steven) Chiou <schiou@hsph.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jing",
                      family = "Qian",
                      role = "aut"),
               person(given = c("Sy", "Han"),
                      family = "Chiou",
                      role = "aut",
                      comment = "Steven"),
               person(given = c("Sy", "Han"),
                      family = "Chiou",
                      role = "cre",
                      email = "schiou@hsph.harvard.edu",
                      comment = "Steven"))
as necessary.
Maintainer: ‘Yan Li <YanLi_stats@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yan",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "yanli_stats@hotmail.com"),
               person(given = "Yang",
                      family = "Li",
                      role = "aut"),
               person(given = "Yichen",
                      family = "Qin",
                      role = "aut"),
               person(given = "Jun",
                      family = "yan",
                      role = "aut"))
as necessary.
Unexported objects imported by ':::' calls:
  ‘copula:::dCdu’ ‘copula:::fitCopStart’
  See the note in ?`:::` about the use of this operator.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
survival_prob_partykit 4.986  0.098   7.541
Maintainer: ‘Arne Henningsen <arne.henningsen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Arne",
                    family = "Henningsen",
                    role = c("aut", "cre"),
                    email = "arne.henningsen@gmail.com")
as necessary.
Maintainer: ‘Alejandro Ordonez <ordonezjosealejandro@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alejandro",
                      family = "Ordonez",
                      role = c("aut", "cre"),
                      email = "ordonezjosealejandro@gmail.com"),
               person(given = c("Christian", "E."),
                      family = "Galarza",
                      role = "aut"),
               person(given = c("Victor", "H."),
                      family = "Lachos",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
seminaive_1       4.982  0.556  10.717
summary.seminaive 5.008  0.431   9.045
checkRd: (-1) call_api_once.Rd:36: Lost braces
    36 | A code{data.frame} with the requested variables at the requested
       |       ^
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
geom_cnt 7.864  0.124  10.284
Maintainer: ‘Mahdi Jalili <m_jalili@farabi.tums.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mahdi",
                    family = "Jalili",
                    role = c("aut", "cre"),
                    email = "m_jalili@farabi.tums.ac.ir")
as necessary.
checkRd: (-1) centroid.Rd:22: Lost braces; missing escapes or markup?
    22 | Centroid value C_{cen}(v) for node v defined as:
       |                  ^
checkRd: (-1) clusterrank.Rd:23: Lost braces; missing escapes or markup?
    23 | where the term f(c_{i}) accounts for the effect of i's local clustering and the term '+1' results from the contribution of \eqn{j}{j} itself. \cr
       |                    ^
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
epc 3.755   0.11   5.012
Maintainer: ‘Duy Nghia Pham <nghiapham@yandex.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Benoit Liquet <b.liquet@uq.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tim",
                      family = "Benham",
                      role = "aut"),
               person(given = "Qibin",
                      family = "Duan",
                      role = "aut"),
               person(given = c("Dirk", "P."),
                      family = "Kroese",
                      role = "aut"),
               person(given = "Benoit",
                      family = "Liquet",
                      role = c("aut", "cre"),
                      email = "b.liquet@uq.edu.au"))
as necessary.
Maintainer: ‘Mohit Dayal <mohitdayal2000@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mohit",
                    family = "Dayal",
                    role = c("aut", "cre"),
                    email = "mohitdayal2000@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘ce-hg.R’ ‘ce-mean.R’ ‘ce-prepdata.R’ ‘ce-quantiles.R’ ‘ce-uccs.R’
    ‘get-survey-files.R’ ‘read-expd.R’ ‘read-fmld.R’ ‘read-fmli.R’
    ‘read-mtbi.R’ ‘recode-ce-variables.R’
Maintainer: ‘Yijian Huang <yhuang5@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yijian",
                    family = "Huang",
                    role = c("aut", "cre"),
                    email = "yhuang5@emory.edu")
as necessary.
checkRd: (-1) cequre.Rd:31: Lost braces; missing escapes or markup?
    31 |   {epsi}^{# regression coefficients} times the initial value,
       |   ^
checkRd: (-1) cequre.Rd:31: Lost braces; missing escapes or markup?
    31 |   {epsi}^{# regression coefficients} times the initial value,
       |          ^
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
calc_c_closure 10.188  0.205  13.099
Specified C++11: please drop specification unless essential
Maintainer: ‘Mengying Zhang <zhangmengying@hrbmu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mengying", "Zhang,Yongsheng", "Li,Juan", "Xu*,Xia"),
                      family = "Li*",
                      role = "aut"),
               person(given = "Mengying",
                      family = "Zhang",
                      role = "cre",
                      email = "zhangmengying@hrbmu.edu.cn"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
ceRNA.cmi 4.274  0.224   5.307
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘extraDoseLines.Rd’ ‘extraDoseNames.Rd’ ‘fixedEffect.Rd’
    ‘randomEffect.Rd’
Maintainer: ‘Diogo Ferrari <diogoferrari@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
get_cescodes 2.054  0.141   5.288
Maintainer: ‘James Balamuta <balamut2@illinois.edu>’

Found the following (possibly) invalid file URI:
  URI: RColorBrewer
    From: README.md

The Description field contains
  (2015) "Good Colour Maps: How to Design Them" <arXiv:1509.03700> at the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Alireza S. Mahani <alireza.s.mahani@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mansour", "T.A."),
                      family = "Sharabiani",
                      role = "aut"),
               person(given = c("Alireza", "S."),
                      family = "Mahani",
                      role = c("aut", "cre"),
                      email = "alireza.s.mahani@gmail.com"))
as necessary.
checkRd: (-1) cfc.tbasis.Rd:23: Lost braces
    23 | Assuming one-dimensional \code{p1} and \code{p2} for clarity, the algorithm calculates cumulative incidence function for cuase 1 using a recursive formula: \code{ci1[n+1] = ci1[n] + dci1[n]}, where \code{dci1[n] = 0.5*(p2[n] + p2[n+1])*(p1[n] - p1[n+1])}. The increment in cumulative incidence function for cause 2 is similarly calculated, \code{dci2[n] = 0.5*(p1[n] + p1[n+1])*(p2[n] - p2[n+1])}. These equations guarantee that \code{dci1[n] + dci2[n] = p1[n]*p2[n] - p1[n+1]*p2[n+1]}. Event-free probability is simply calculated as code{efp[n] = p1[n]*p2[n]}. Taken together, this numerical integration ensures that \code{efp[n+1] - efp[n] + dci1[n] + dci2[n] = 0}.
       |                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ^
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
care   5.506  0.151   6.450
flours 3.703  0.036   5.013
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
cfd.quantile         6.262  0.004   7.058
cfd.mean             4.714  0.007   5.792
cfd.semipar.quantile 4.431  0.000   5.571
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
fbpRaster 7.31  0.034   9.617
Maintainer: ‘Santtu Tikka <santtuth@gmail.com>’

The Description field contains
  Pearl, J. (2007, 2008) <arXiv:1206.5294>,
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yi Zhao <zhaoyi1026@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yi",
                      family = "Zhao",
                      role = c("aut", "cre"),
                      email = "zhaoyi1026@gmail.com"),
               person(given = "Xi",
                      family = "Luo",
                      role = "aut",
                      email = "xi.rossi.luo@gmail.com"),
               person(given = "Martin",
                      family = "Lindquist",
                      role = "aut",
                      email = "mal2053@gmail.com"),
               person(given = "Brian",
                      family = "Caffo",
                      role = "aut",
                      email = "bcaffo@gmail.com"))
as necessary.

File 'R/cfma-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.

The Description field contains
  to Functional Magnetic Resonance Imaging Data, <arXiv:1805.06923> for
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
lateonset.simu 10.113  0.146  12.787
CFO.oc          7.247  0.103   9.112
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
cforward 5.023  0.202   6.933
Maintainer: ‘Erick Verleye <erve3705@colorado.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  boot.cgaim.Rd: doParallel
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
boot.cgaim 4.433  0.032   6.216
vcov.cgaim 3.576  0.000   5.286
Maintainer: ‘Ahmadou Dicko <mail@ahmadoudicko.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "file",
                      family = "inst/AUTHORS",
                      role = "aut"),
               person(given = "Ahmadou",
                      family = "Dicko",
                      role = "cre",
                      email = "mail@ahmadoudicko.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
mental      4.391  0.204   5.535
s.conv.conv 3.619  0.002   5.242
s.conc.conc 3.509  0.015   5.061
Maintainer: ‘Yu-chia Chang <curare7177@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Yuan-chin", "I."),
                      family = "Chang",
                      role = "aut"),
               person(given = "Yu-chia",
                      family = "Chang",
                      role = c("aut", "cre"),
                      email = "curare7177@gmail.com"),
               person(given = "Ling-wan",
                      family = "Chen",
                      role = "aut"))
as necessary.
Malformed Title field: should not end in a period.
Maintainer: ‘LI Wu <liwu@staff.shu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "LI",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "liwu@staff.shu.edu.cn")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
sdm 5.757  0.004    6.58
Maintainer: ‘Arvid Sjolander <arvid.sjolander@ki.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Arvid",
                    family = "Sjolander",
                    role = c("aut", "cre"),
                    email = "arvid.sjolander@ki.se")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
cgmreport 5.853  0.289   8.357
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
CGManalyzer-package 5.417  0.189   6.655
Examples with CPU (user + system) or elapsed time > 5s
                                       user system elapsed
Cluster_Gauss_Newton_Bootstrap_method 4.254  0.143   6.444
plot_paraDistribution_byViolinPlots   4.237  0.031   5.825
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
newggslopegraph 7.534  0.023   9.383
Maintainer: ‘Shan Ba <shanbatr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shan",
                      family = "Ba",
                      role = c("aut", "cre"),
                      email = "shanbatr@gmail.com"),
               person(given = c("V.", "Roshan"),
                      family = "Joseph",
                      role = "aut"))
as necessary.
Maintainer: ‘Carl Witthoft <cellocgw@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carl",
                    family = "Witthoft",
                    role = c("aut", "cre"),
                    email = "cellocgw@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
confint.chandwich 5.701  0.038   8.841
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cpt.geo-class.Rd: ggplot2
  data.set.Rd: data.set-methods
  data.set_-.Rd: data.set<--methods
  pen.value.Rd: pen.value-methods
  pen.value_-.Rd: pen.value<--methods
  test.stat.Rd: test.stat-methods
  test.stat_-.Rd: test.stat<--methods
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Haotian Xu <haotian.xu@uclouvain.be>’

The Description field contains
  <arXiv:2006.03283>; 2) univariate polynomials:
  <doi:10.1214/20-AOS1953>, <arXiv:2101.05477>, <arXiv:2110.06450>; 6)
  high-dimensional linear regression models: <arXiv:2010.10410>,
  <arXiv:2207.12453>; 7) high-dimensional vector autoregressive models:
  <arXiv:1909.06359>; 8) high-dimensional self exciting point processes:
  <arXiv:2006.03572>; 9) dependent dynamic nonparametric random dot
  product graphs: <arXiv:1911.07494>; 10) univariate mean against
  adversarial attacks: <arXiv:2105.10417>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) Hausdorff.dist.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{vec1}{A \code{integer} vector forms a subset of {1, 2, ..., n}.}
       |                                                       ^
checkRd: (-1) Hausdorff.dist.Rd:12: Lost braces; missing escapes or markup?
    12 | \item{vec2}{A \code{integer} vector forms a subset of {1, 2, ..., n}.}
       |                                                       ^
checkRd: (-1) online.univar.multi.Rd:47-57: Lost braces
    47 | online.univar.one2 = function(y_vec, gamma, tau_gamma, ...){
       |                                                            ^
checkRd: (-1) online.univar.multi.Rd:50-55: Lost braces
    50 |   while(FLAG == 0 & t <= length(y_vec)){
       |                                        ^
checkRd: (-1) online.univar.multi.Rd:71-89: Lost braces
    71 | online.univar.one3 = function(y_vec, tau_vec, ...){
       |                                                   ^
checkRd: (-1) online.univar.multi.Rd:72-74: Lost braces
    72 |   if(length(y_vec) != length(tau_vec)){
       |                                       ^
checkRd: (-1) online.univar.multi.Rd:77-87: Lost braces
    77 |   while(FLAG == 0 & t <= length(y_vec)){
       |                                        ^
checkRd: (-1) online.univar.multi.Rd:81-86: Lost braces
    81 |     while(j < J & FLAG == 0){
       |                             ^
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
online.univar.multi        6.298  0.012   7.950
WBSIP.cov                  5.685  0.067   6.886
WBS.uni.nonpar             5.198  0.000   6.007
DP.SEPP                    4.854  0.004   5.950
CV.search.DP.LR.regression 4.710  0.012   5.374
tuneBSmultinonpar          4.693  0.004   6.135
WBS.univar                 4.348  0.020   5.057
WBS.multi.nonpar           4.111  0.007   5.782
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  changepointsVar-package.Rd: lars
  jumpointsVar.Rd: lars
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
change_point_analyzer 6.915  0.189   9.392
Maintainer: ‘Shannon T. Holloway <shannon.t.holloway@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hongyuan",
                      family = "Cao",
                      role = "aut"),
               person(given = c("Wei", "Biao"),
                      family = "Wu",
                      role = "aut"),
               person(given = c("Shannon", "T."),
                      family = "Holloway",
                      role = c("aut", "cre"),
                      email = "shannon.t.holloway@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
fitS 6.062  0.138   7.715
Maintainer: ‘Davide Altomare <davide.altomare@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Davide",
                    family = "Altomare",
                    role = c("aut", "cre"),
                    email = "davide.altomare@gmail.com")
as necessary.
Maintainer: ‘Marco Tschimpke <marco.tschimpke@plus.ac.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thimo",
                      family = "Kasper",
                      role = "aut",
                      email = "thimo.kasper@plus.ac.at"),
               person(given = "Florian",
                      family = "Griessenberger",
                      role = "aut",
                      email = "florian.griessenberger@plus.ac.at"),
               person(given = "Manuela",
                      family = "Schreyer",
                      role = "aut",
                      email = "manuelalarissa.schreyer@sbg.ac.at"),
               person(given = "Johannes",
                      family = "Bartel",
                      role = "aut"),
               person(given = "Wolfgang",
                      family = "Trutschnig",
                      role = "aut",
                      email = "Wolfgang.Trutschnig@sbg.ac.at"),
               person(given = "Marco",
                      family = "Tschimpke",
                      role = "cre",
                      email = "marco.tschimpke@plus.ac.at"))
as necessary.
checkRd: (-1) cql.Rd:28: Lost braces; missing escapes or markup?
    28 | {X} \code{<x_var>, <(x_facet)>}: \tab\tab\tab\tab  X-axis variable. May include a second categorical\cr
       | ^
checkRd: (-1) cql.Rd:30: Lost braces; missing escapes or markup?
    30 | {Y} \code{<y_var>}: \tab\tab\tab\tab Y-axis variable. *Not used for \code{hist}.\cr
       | ^
checkRd: (-1) cql.Rd:38: Lost braces; missing escapes or markup?
    38 | {Y_label} \code{'<ylab>'}: \tab\tab\tab\tab  Y-axis custom label. Defaults to <y_var>\cr
       | ^
checkRd: (-1) cql.Rd:39: Lost braces; missing escapes or markup?
    39 | {Legend} \code{'<legend>'}: \tab\tab\tab\tab  Legend custom label. Defaults to <x_category>\cr
       | ^
checkRd: (-1) cql.Rd:40: Lost braces; missing escapes or markup?
    40 | {Colorset} \code{'<clist>'}: \tab\tab\tab\tab  Custom set of colors for <x_category> levels.\cr
       | ^
checkRd: (-1) cql.Rd:42: Lost braces; missing escapes or markup?
    42 | {AggFunc} \code{'<func>'}: \tab\tab\tab\tab Summary function for \code{bar} type.\cr
       | ^
checkRd: (-1) cql.Rd:45: Lost braces; missing escapes or markup?
    45 | {Fit} \code{'<show_se>'}: \tab\tab\tab\tab Valid types: \code{true|false}. Fit quadratic line.\cr
       | ^
checkRd: (-1) cql.Rd:47: Lost braces; missing escapes or markup?
    47 | {ConfInt} \code{'<interval>'}: \tab\tab\tab\tab  Show error bars. Value is confidence interval value. E.g. '.95'
       | ^
checkRd: (-1) create_unit_tests.Rd:17: Lost braces; missing escapes or markup?
    17 | Create `{testthat}` test cases for the code.
       |         ^
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘check_hint.R’ ‘check_hints.R’ ‘check_question.R’ ‘insert_audio.R’
File ‘checkmate/libs/checkmate.so’:
  Found non-API call to R: ‘Rf_isFrame’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  checkpoint.Rd: pkgdepends
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Lawrence Hudson <quicklizard@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Lawrence", "Hudson", "with", "contributions", "from", "Dan"),
                      family = "Reuman",
                      role = "aut"),
               person(given = "Rob",
                      family = "Emerson",
                      role = "aut"),
               person(given = "Lawrence",
                      family = "Hudson",
                      role = "cre",
                      email = "quicklizard@googlemail.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  pipe.Rd: magrittr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
univariate_table 4.172  0.026   6.217
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
chem16S-data         7.067  0.419   9.753
phyloseq_integration 6.799  0.194   7.903
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
chemoDivPlot 5.152  0.264   7.396
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
pcaCV       11.076  0.003  12.851
plotSEPprm   4.247  0.000   5.322
plotpredprm  4.238  0.003   6.356
plotresprm   4.153  0.012   5.097
Maintainer: ‘Haitian Xie <xht@gsm.pku.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haitian",
                    family = "Xie",
                    role = c("aut", "cre"),
                    email = "xht@gsm.pku.edu.cn")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
shortcuts 4.064   0.09    5.48
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
chest_plot 7.584   0.07  10.402
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
egt01       4.628  0.015   5.695
egt05_qtcat 4.502  0.008   6.126
aet03       4.292  0.159   6.130
fstg01      3.838  0.032   5.507
fstg02      3.705  0.014   5.271
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
fill.in.zeros 6.921  0.334   5.968
Maintainer: ‘Stef van Buuren <stef.vanbuuren@tno.nl>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
generar_circunscripciones 7.463  0.128   8.260
generar_regiones          7.194  0.094   8.146
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
interpolate_gaps_hourly 3.87  0.008   5.124
Maintainer: ‘Stefan Roediger <stefan.roediger@b-tu.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) C316.amp.Rd:28-32: Lost braces
    28 |     40 x {
       |          ^
checkRd: (-1) C317.amp.Rd:28-32: Lost braces
    28 |     40 x {
       |          ^
checkRd: (-1) C60.amp.Rd:63-67: Lost braces
    63 |     40 x {
       |          ^
Unknown package ‘qpcR’ in Rd xrefs
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
capillaryPCR 6.868  0.268   8.927
amptester    6.495  0.091   8.639
Maintainer: ‘Kauê de Sousa <kaue.desousa@inn.no>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  chkpt_brms.Rd: brms
  make_brmsfit.Rd: brms
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Package unavailable to check Rd xrefs: ‘cmdstanr’
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
chngptm 8.089  0.005  10.478
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
solubility 4.106  0.107   5.327
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
streetNameLocator   4.447  0.080   5.426
segmentLocator      4.313  0.102   5.917
streetNumberLocator 4.066  0.000   5.351
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘closestdist_gcms.Rd’ ‘compare_gcms.R’ ‘compare_gcms.Rd’
    ‘cor_gcms.Rd’ ‘dist_gcms.Rd’ ‘env_gcms.Rd’ ‘flatten_gcms.Rd’
    ‘hclust_gcms.Rd’ ‘kmeans_gcms.R’ ‘kmeans_gcms.Rd’
    ‘montecarlo_gcms.Rd’ ‘optk_gcms.Rd’ ‘summary_gcms.Rd’
    ‘transform_gcms.R’ ‘transform_gcms.Rd’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
compare_gcms    11.917  0.105  14.000
montecarlo_gcms  8.124  0.081  11.027
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "P."),
                    family = "Fay",
                    role = c("aut", "cre"),
                    email = "mfay@niaid.nih.gov")
as necessary.
Maintainer: ‘Axel Gandy <a.gandy@imperial.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Axel",
                      family = "Gandy",
                      role = c("aut", "cre"),
                      email = "a.gandy@imperial.ac.uk"),
               person(given = c("F.", "Din-Houn"),
                      family = "Lau",
                      role = "aut"))
as necessary.
Maintainer: ‘Jonathan Rosenblatt <johnros@bgu.ac.il>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jonathan",
                    family = "Rosenblatt",
                    role = c("aut", "cre"),
                    email = "johnros@bgu.ac.il")
as necessary.
Maintainer: ‘Ari Lamstein <ari@lamsteinconsulting.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ari",
                    family = "Lamstein",
                    role = c("aut", "cre"),
                    email = "ari@lamsteinconsulting.com")
as necessary.
Maintainer: ‘Ari Lamstein <ari@lamsteinconsulting.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ari",
                    family = "Lamstein",
                    role = c("aut", "cre"),
                    email = "ari@lamsteinconsulting.com")
as necessary.
Maintainer: ‘Matthieu Herrmann <matthieu.herrmann@monash.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Hailong Chai <chaihl17@lzu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hailong",
                    family = "Chai",
                    role = c("aut", "cre"),
                    email = "chaihl17@lzu.edu.cn")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Ryacas-all.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggpng.Rd: ggsave
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Author field differs from that derived from Authors@R
  Author:    ‘Garrick Aden-Buie [aut, cre] (<https://orcid.org/0000-0002-7111-0077>), Winston Chang [aut], Barret Schloerke [aut] (<https://orcid.org/0000-0001-9986-114X>), Posit Software, PBC [cph, fnd] (03wc8by49)’
  Authors@R: ‘Garrick Aden-Buie [aut, cre] (ORCID: <https://orcid.org/0000-0002-7111-0077>), Winston Chang [aut], Barret Schloerke [aut] (ORCID: <https://orcid.org/0000-0001-9986-114X>), Posit Software, PBC [cph, fnd] (ROR: <https://ror.org/03wc8by49>)’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bind_record.Rd’ ‘chronicle.R’ ‘fmap_record.Rd’
    ‘grapes-greater-than-equals-grapes.Rd’ ‘pick.Rd’
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
plot_chronochrt 5.648  0.144   8.432
geom_chronochRt 4.193  0.029   5.542
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  insert_chunkwise_into.Rd: tbl
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Specified C++11: please drop specification unless essential
checkRd: (-1) chunker-methods.Rd:63: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) chunker-methods.Rd:64: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) chunker-methods.Rd:69: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) chunker-methods.Rd:70: Lost braces in \enumerate; meant \describe ?
Maintainer: ‘William Nickols <willnickols@college.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "William",
                    family = "Nickols",
                    role = c("aut", "cre"),
                    email = "willnickols@college.harvard.edu")
as necessary.
Maintainer: ‘Juris Meija <juris.meija@nrc-cnrc.gc.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Juris",
                      family = "Meija",
                      role = c("aut", "cre"),
                      email = "juris.meija@nrc-cnrc.gc.ca"),
               person(given = "Antonio",
                      family = "Possolo",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘abundances2ratios.Rd’:
    http://dx.doi.org/10.1088/0026-1394/45/4/012
    https://doi.org/10.1088/1681-7575/aa634d
  File ‘at.weight.Rd’:
    http://dx.doi.org/10.1088/0026-1394/45/1/008
    https://doi.org/10.1088/1681-7575/aa634d
  File ‘ciaaw.mass.2012.Rd’:
    https://doi.org/10.1088/1674-1137/41/3/030003
  File ‘ciaaw.mass.2016.Rd’:
    https://doi.org/10.1088/1674-1137/41/3/030003
  File ‘mmm.Rd’:
    http://dx.doi.org/10.1002/sim.6789
    https://doi.org/10.1088/1681-7575/aa634d
  File ‘normalize.ratios.Rd’:
    http://dx.doi.org/10.1088/0026-1394/45/1/008
    https://doi.org/10.1088/1681-7575/aa634d
Maintainer: ‘Gabriele Lubatti <gabriele.lubatti@helmholtz-muenchen.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gabriele",
                    family = "Lubatti",
                    role = c("aut", "cre"),
                    email = "gabriele.lubatti@helmholtz-muenchen.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
PlotCumulativeMeanTrace  3.775  0.063   8.872
CalculateAcceptanceRates 2.168  0.200   5.155
CalculateFeatureMean     0.050  0.011   5.411
SampleEdgeProbabilities  0.053  0.005   5.097
sub-.cia_post_chain      0.045  0.006   5.112
CollectUniqueObjects     0.025  0.008  10.640
PostProcessChains        0.028  0.000  11.712
Maintainer: ‘Jeffrey Durieux <durieux.jeffrey@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jeffrey",
                      family = "Durieux",
                      role = c("aut", "cre"),
                      email = "durieux.jeffrey@gmail.com"),
               person(given = "Tom",
                      family = "Wilderjans",
                      role = "aut"),
               person(given = c("Juan", "Claramunt"),
                      family = "Gonzalez",
                      role = "ctb"))
as necessary.
Maintainer: ‘Sokbae Lee <sl3841@columbia.edu>’

The Description field contains
  <arXiv:2004.08318 [econ.EM]>, accepted for publication in Journal of
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
AAA_DML 6.635  0.384   8.759
Maintainer: ‘Stefan Konigorski <stefan.konigorski@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Dadong Zhang <dzhang4@illumina.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dadong",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "dzhang4@illumina.com"),
               person(given = "Jingye",
                      family = "Wang",
                      role = "aut",
                      email = "jwang16@illumina.com"),
               person(given = "Suqin",
                      family = "Cai",
                      role = "aut",
                      email = "scai1@illumina.com"),
               person(given = "Johan",
                      family = "Surtihadi",
                      role = "aut",
                      email = "jsurtihadi@illumina.com"))
as necessary.
checkRd: (-1) ec.datalag.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{prepares Dy y_1 Dy_1 ... Dy_{nlag-1} for estimation}
       |                                    ^
checkRd: (-1) ec.datalag.Rd:15: Lost braces
    15 | ymat contains the folloiwing columns {Dy y_1 Dy_1 ... Dy_{nlag-1}}
       |                                      ^
checkRd: (-1) ec.datalag.Rd:15: Lost braces; missing escapes or markup?
    15 | ymat contains the folloiwing columns {Dy y_1 Dy_1 ... Dy_{nlag-1}}
       |                                                          ^
checkRd: (-1) lagn.Rd:21: Lost braces; missing escapes or markup?
    21 |              REM: alternative to "lead-lag" {dplyr} which applies to vector y
       |                                             ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘long_est.R’
Maintainer: ‘Aurelie Siberchicot <aurelie.siberchicot@univ-lyon1.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Aurelie",
                      family = "Siberchicot",
                      role = c("aut", "cre"),
                      email = "aurelie.siberchicot@univ-lyon1.fr"),
               person(given = "Adrien",
                      family = "Merville",
                      role = "aut"),
               person(given = "Marie-Claude",
                      family = "Bel-Venner",
                      role = "aut"),
               person(given = "Samuel",
                      family = "Venner",
                      role = "aut"))
as necessary.
Maintainer: ‘Vishal H. Oza <vishoza@uab.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Vishal", "H."),
                      family = "Oza",
                      role = c("aut", "cre"),
                      email = "vishoza@uab.edu"),
               person(given = "Roshan",
                      family = "Darji",
                      role = "aut"),
               person(given = c("Brittany", "N."),
                      family = "Lasseigne",
                      role = "aut"))
as necessary.
Maintainer: ‘Toshiaki Ara <toshiaki.ara@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Toshiaki",
                    family = "Ara",
                    role = c("aut", "cre"),
                    email = "toshiaki.ara@gmail.com")
as necessary.
checkRd: (-1) CIplot.Rd:58: Lost braces; missing escapes or markup?
    58 | \item{las}{numeric in {0,1,2,3}; the style of axis labels.
       |                       ^
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plot.CIps    7.186  0.032   9.983
CIps         6.560  0.088   7.479
lmps         6.511  0.036   7.645
summary.lmps 6.463  0.035   9.574
print.CIps   6.444  0.000   7.971
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘functions.R’
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
remove_cardinal_biases 15.327  0.469  13.977
circ_loess              3.802  0.167   5.600
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
circos.genomicPoints     4.717  0.004   6.171
circos.genomicInitialize 4.000  0.008   5.157
Maintainer: ‘Robert Fitak <rfitak9@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                                            user system elapsed
mnntsparametersunderindependenceunivariate 6.896  0.000   8.631
mnntsgofstatistics                         6.381  0.020   8.193
mnntscharacteristicfunction                6.019  0.043   7.400
mnntsgofdesignmatrix                       5.713  0.117   7.184
Maintainer: ‘Maria Mercedes Gregorio-Dominguez <mercedes@itam.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Jose"),
                      family = "Fernandez-Duran",
                      role = "aut"),
               person(given = c("Maria", "Mercedes"),
                      family = "Gregorio-Dominguez",
                      role = c("aut", "cre"),
                      email = "mercedes@itam.mx"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                      user system elapsed
nntsmanifoldnewtonestimationsymmetry 4.644  0.022    5.95
Maintainer: ‘Azade Ghazanfarihesari <azade_ghazanfari@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Azade",
                      family = "Ghazanfarihesari",
                      role = c("aut", "cre"),
                      email = "azade_ghazanfari@yahoo.com"),
               person(given = c("Majid", "Sarmad-", "Ferdowsi", "University", "Of"),
                      family = "Mashhad",
                      role = "aut"))
as necessary.
Maintainer: ‘Mario Santoro <santoro.ma@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/santoroma/CircSpaceTime
which should likely be
  https://github.com/santoroma/CircSpaceTime/issues
instead.
Specified C++11: please drop specification unless essential
Maintainer: ‘Claudio Agostinelli <claudio.agostinelli@unitn.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("S-plus", "original", "by", "Ulric"),
                      family = "Lund",
                      role = "aut",
                      email = "ulund@calpoly.edu"),
               person(given = c("R", "port", "by", "Claudio"),
                      family = "Agostinelli",
                      role = "aut",
                      email = "claudio.agostinelli@unitn.it"),
               person(given = "Claudio",
                      family = "Agostinelli",
                      role = "cre",
                      email = "claudio.agostinelli@unitn.it"))
as necessary.
checkRd: (-1) rstable.Rd:42: Lost braces
    42 | Lo\"{g}ae\"{v}e, M. (1977). Probability Theory I. (fourth edition) Springer-Verlag, New York.
       |     ^
checkRd: (-1) rstable.Rd:42: Lost braces
    42 | Lo\"{g}ae\"{v}e, M. (1977). Probability Theory I. (fourth edition) Springer-Verlag, New York.
       |            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  circ.plot.Rd: eqscplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Evandro Konzen <circularev.r@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Evandro",
                    family = "Konzen",
                    role = c("aut", "cre"),
                    email = "circularev.r@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
ssm_analyze 5.985   0.12   7.521
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cirls.fit.Rd’ ‘confint.cirls.Rd’
Maintainer: ‘James Joseph Balamuta <balamut2@illinois.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
draw.crossplots       6.658  0.059   8.246
draw.squareplots      5.521  0.020   7.332
forward.sel.dglm      4.435  0.028   5.487
forward.sel.dglm.real 4.034  0.067   5.884
Maintainer: ‘Marek Gagolewski <marek@gagolewski.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dbExecQuery.Rd: dbSendQuery, dbClearResult, dbGetQuery
  lbsClear.Rd: dbCommit, dbRollback
  lbsDeleteAllAuthorsDocuments.Rd: dbCommit, dbRollback
  lbsTidy.Rd: dbCommit, dbRollback
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Neal Haddaway <nealhaddaway@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) data_generator.Rd:93: Lost braces; missing escapes or markup?
    93 |   \item{estimand_mean}{List of means of the FULL, S_{++}, S_{*+} and
       |                                                     ^
checkRd: (-1) data_generator.Rd:93: Lost braces; missing escapes or markup?
    93 |   \item{estimand_mean}{List of means of the FULL, S_{++}, S_{*+} and
       |                                                             ^
checkRd: (-1) data_generator.Rd:95: Lost braces; missing escapes or markup?
    95 |   \item{estimand_sd}{List of standard deviations of the FULL, S_{++}, S_{*+}
       |                                                                 ^
checkRd: (-1) data_generator.Rd:95: Lost braces; missing escapes or markup?
    95 |   \item{estimand_sd}{List of standard deviations of the FULL, S_{++}, S_{*+}
       |                                                                         ^
checkRd: (-1) data_generator_loop.Rd:96: Lost braces; missing escapes or markup?
    96 |   \item{estimand_mean}{List of means of the FULL, S_{++}, S_{*+} and
       |                                                     ^
checkRd: (-1) data_generator_loop.Rd:96: Lost braces; missing escapes or markup?
    96 |   \item{estimand_mean}{List of means of the FULL, S_{++}, S_{*+} and
       |                                                             ^
checkRd: (-1) data_generator_loop.Rd:98: Lost braces; missing escapes or markup?
    98 |   \item{estimand_sd}{List of standard deviations of the FULL, S_{++},
       |                                                                 ^
checkRd: (-1) data_generator_loop.Rd:99: Lost braces; missing escapes or markup?
    99 |   S_{*+} and PP estimands}
       |     ^
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
plot_dc 3.767  0.112   5.191
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
add_ci               4.470  0.075   5.642
add_quantile.lmerMod 3.739  0.066   5.099
Maintainer: ‘Kary Främling <Kary.Framling@umu.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kary",
                    family = "Främling",
                    role = c("aut", "cre"),
                    email = "kary.framling@umu.se")
as necessary.

The Description field contains
  e.g. Främling (2020) <arXiv:2009.13996>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) ciu.ggplot.col.Rd:41: Lost braces; missing escapes or markup?
    41 | \item{ind.inputs}{Indices of input features to explain (the set {i} in CIU
       |                                                                 ^
checkRd: (-1) ciu.meta.explain.Rd:27: Lost braces; missing escapes or markup?
    27 | \item{ind.inputs}{Indices of input features to explain (the set {i} in CIU
       |                                                                 ^
checkRd: (-1) ciu.meta.result.new.Rd:30: Lost braces; missing escapes or markup?
    30 | \item{ind.inputs}{Indices of input features to explain (the set {i} in CIU
       |                                                                 ^
checkRd: (-1) ciu.textual.Rd:38: Lost braces; missing escapes or markup?
    38 | \item{ind.inputs}{Indices of input features to explain (the set {i} in CIU
       |                                                                 ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CivisFuture.Rd: Future
  civis_platform.Rd: future, plan
  write_civis_file.Rd: plan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Thomas Wiemann <wiemann@uchicago.edu>’

The Description field contains
  proposed by Wiemann (2023) <arXiv:2311.17021>. CIV allows for optimal
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Stefan Konigorski <stefan.konigorski@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Raphiel Murden <rmurden@emory.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Anton Strezhnev <astrezhnev@uchicago.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Soubhik",
                      family = "Barari",
                      role = "aut"),
               person(given = "Elissa",
                      family = "Berwick",
                      role = "aut"),
               person(given = "Jens",
                      family = "Hainmueller",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Hopkins",
                      role = "aut"),
               person(given = "Sean",
                      family = "Liu",
                      role = "aut"),
               person(given = "Anton",
                      family = "Strezhnev",
                      role = c("aut", "cre"),
                      email = "astrezhnev@uchicago.edu"),
               person(given = "Teppei",
                      family = "Yamamoto",
                      role = "aut"))
as necessary.
Maintainer: ‘Hong Zhang <hzhang@wpi.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hong",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "hzhang@wpi.edu"),
               person(given = "Judong",
                      family = "Shen",
                      role = "aut"))
as necessary.
Maintainer: ‘Haoyu Zhang <andrew.haoyu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ni",
                      family = "Zhao",
                      role = "aut"),
               person(given = "Haoyu",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "andrew.haoyu@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
omniRLRT_fast 3.75  0.012   5.162
Maintainer: ‘Eric C. Anderson <eric.anderson@noaa.gov>’

The Description field contains
  (<https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1471-8286.2005.00884.x>),
Please use permanent DOI markup for linking to publications as in <doi:prefix/suffix>.
Examples with CPU (user + system) or elapsed time > 5s
                                user system elapsed
summarize_survival_from_census 5.182  0.032   6.144
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
CO2emissions 7.745   0.06   9.961
Maintainer: ‘Jonathan M. Lees<jonathan.lees@unc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jonathan", "M."),
                    family = "Lees",
                    role = c("aut", "cre"),
                    email = "jonathan.lees@unc.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compute_cluster_composition.R’ ‘extract_ids_vector.R’
    ‘perform_clustering.R’
Maintainer: ‘Gaurav Sood <gsood07@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) get_langs.Rd:13: Lost braces
    13 | character vector listing all the languages that tag API call supports. See \code{\link{tag_images}} and code{\link{tag_image_urls}}
       |                                                                                                             ^
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
sim_adrf 8.480  0.101  10.646
sim_ame  3.862  0.044   5.245
sim_setx 3.010  0.004   5.060
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
cc04-0-Dudoit-class 5.255  0.005    6.39
Maintainer: ‘Martin Maechler <maechler@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Martin", "Maechler", "partly", "based", "on", "code", "from", "Robert"),
                      family = "Gentleman",
                      role = "aut"),
               person(given = "Martin",
                      family = "Maechler",
                      role = "cre",
                      email = "maechler@stat.math.ethz.ch"))
as necessary.
Maintainer: ‘Hadley Wickham <h.wickham@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hadley",
                    family = "Wickham",
                    role = c("aut", "cre"),
                    email = "h.wickham@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  generate_classification_data.Rd: knn
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
classifly 4.397   0.13   5.884
Maintainer: ‘Jakob Raymaekers <jakob.raymaekers@kuleuven.be>’

The Description field contains
  and tree-based classifiers, <arXiv:2106.08814>. Examples can be found
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
vcr.rpart.newdata 4.186  0.178   5.797
Maintainer: ‘Brian Ripley <Brian.Ripley@R-project.org>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Chris J. Lloyd <c.lloyd@mbs.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Chris", "J."),
                    family = "Lloyd",
                    role = c("aut", "cre"),
                    email = "c.lloyd@mbs.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘as_raster.Rd’ ‘clc.R’ ‘clc_category.R’ ‘clc_raster.R’ ‘copy_to.Rd’
    ‘cut_to_extent.Rd’ ‘get_colors.Rd’ ‘get_levels.Rd’ ‘get_raster.Rd’
    ‘plot_clc.Rd’ ‘prepare_plot.Rd’ ‘save_to.Rd’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
as_raster 8.405  0.165  10.443
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Florencia", "I."),
                      family = "Pozzi",
                      role = c("aut", "cre"),
                      email = "florenciapoz@hotmail.com"),
               person(given = c("Silvina", "A."),
                      family = "Felitti",
                      role = "aut"))
as necessary.
Maintainer: ‘Sherry Zhao <sxzhao@gwu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sherry",
                    family = "Zhao",
                    role = c("aut", "cre"),
                    email = "sxzhao@gwu.edu")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Karim Mané [aut, cre] (<https://orcid.org/0000-0002-9892-2999>), Thibaut Jombart [ctb] (Thibault contributed in development of date_guess().), Abdoelnaser Degoot [aut] (<https://orcid.org/0000-0001-8788-2496>), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut] (<https://orcid.org/0000-0003-3318-6668>), Hugo Gruson [ctb, rev] (<https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [rev] (<https://orcid.org/0000-0001-5294-7819>), James M. Azam [rev] (<https://orcid.org/0000-0001-5782-7330>), Joshua W. Lambert [rev] (<https://orcid.org/0000-0001-5218-3046>), Chris Hartgerink [rev] (<https://orcid.org/0000-0003-1050-6809>), Andree Valle-Campos [rev, ctb] (<https://orcid.org/0000-0002-7779-481X>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (00a0jsq62), data.org [fnd]’
  Authors@R: ‘Karim Mané [aut, cre] (ORCID: <https://orcid.org/0000-0002-9892-2999>), Thibaut Jombart [ctb] (Thibault contributed in development of date_guess().), Abdoelnaser Degoot [aut] (ORCID: <https://orcid.org/0000-0001-8788-2496>), Bankolé Ahadzie [aut], Nuredin Mohammed [aut], Bubacarr Bah [aut] (ORCID: <https://orcid.org/0000-0003-3318-6668>), Hugo Gruson [ctb, rev] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Pratik R. Gupte [rev] (ORCID: <https://orcid.org/0000-0001-5294-7819>), James M. Azam [rev] (ORCID: <https://orcid.org/0000-0001-5782-7330>), Joshua W. Lambert [rev] (ORCID: <https://orcid.org/0000-0001-5218-3046>), Chris Hartgerink [rev] (ORCID: <https://orcid.org/0000-0003-1050-6809>), Andree Valle-Campos [rev, ctb] (ORCID: <https://orcid.org/0000-0002-7779-481X>), London School of Hygiene and Tropical Medicine, LSHTM [cph] (ROR: <https://ror.org/00a0jsq62>), data.org [fnd]’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
scan_data 8.462  0.166  10.455
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
cv11_vca_by_median 13.400  0.109  17.498
cv25_qbinom_ppu    10.330  0.090  11.697
cv26_qpoisson_ppu   6.999  0.024   7.763
Maintainer: ‘Taylor B. Arnold <tarnold2@richmond.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Taylor", "B."),
                    family = "Arnold",
                    role = c("aut", "cre"),
                    email = "tarnold2@richmond.edu")
as necessary.
Maintainer: ‘Pierre Roudier <roudierp@landcareresearch.co.nz>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    clhs_0.7-2
    clhs_0.7-0
    clhs_0.6-0
    clhs_0.5-7
    clhs_0.5-6
    clhs_0.5-3
    clhs_0.5-2
    clhs_0.5-1
    clhs_0.5-0
    clhs_0.4-3
    clhs_0.4-2
    clhs_0.4-1
    clhs_0.4-0
    clhs_0.3-2
    clhs_0.3-1
    clhs_0.3-0
    clhs_0.2-1
    clhs_0.2-0
    clhs_0.1-0
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot.cLHS_result 5.494   0.08   8.075
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
inline-markup 4.984  0.016   5.968
cli_ol        3.878  0.028   5.292
Maintainer: ‘Michael P.B. Gallaugher <gallaump@mcmaster.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Michael", "P.B."),
                      family = "Gallaugher",
                      role = c("aut", "cre"),
                      email = "gallaump@mcmaster.ca"),
               person(given = c("Paul", "D."),
                      family = "McNicholas",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:1802.04849>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ClickHouseHTTPConnection-class.Rd: dbConnect
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Michael Scholz <michael.scholz@th-deg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michael",
                      family = "Scholz",
                      role = c("aut", "cre"),
                      email = "michael.scholz@th-deg.de"),
               person(given = "Theo",
                      family = "van Kraay",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  fitMarkovChain.Rd: Rsolnp
  frequencies.Rd: transactions
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
getConsensusClustersParallel 0.741  0.032   6.788
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.
Specified C++11: please drop specification unless essential
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘horner.Rd’
checkRd: (-1) cf_save_kml.Rd:68: Lost braces
    68 | \code{\link{cf_find_station}} and code{vignette("choose-station")} for
       |                                       ^
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
liftHurstCC 7.387  0.011   8.280
liftHurstC  6.105  0.091   7.044
Maintainer: ‘Yanming Li <liyanmin@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yanming",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "liyanmin@umich.edu"),
               person(given = "Kerby",
                      family = "Shedden",
                      role = "aut"),
               person(given = c("Brenda", "W."),
                      family = "Gillespie",
                      role = "aut"),
               person(given = c("John", "A."),
                      family = "Gillespie",
                      role = "aut"))
as necessary.

File 'R/clikcorr-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
clikcorr.lrt 6.628  0.007   8.338
Maintainer: ‘Hannah Owens <hannah.owens@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Jose A. Guijarro <jaguijarro21@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jose", "A."),
                    family = "Guijarro",
                    role = c("aut", "cre"),
                    email = "jaguijarro21@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
dahgrid 12.428   0.37  15.457
Maintainer: ‘Kauê de Sousa <desousa.kaue@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Xi (Rossi) Luo <xi.rossi.luo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("T.", "Tony"),
                      family = "Cai",
                      role = "aut"),
               person(given = "Weidong",
                      family = "Liu",
                      role = "aut"),
               person(given = "Xi",
                      family = "Luo",
                      role = "aut",
                      comment = "Rossi"),
               person(given = "Xi",
                      family = "Luo",
                      role = "cre",
                      email = "xi.rossi.luo@gmail.com",
                      comment = "Rossi"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
print.cv.clime 5.395  0.000   7.146
cv.clime       5.365  0.027   7.226
Maintainer: ‘Fergus Reig-Gracia <fergusrg@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Fergus",
                      family = "Reig-Gracia",
                      role = c("aut", "cre"),
                      email = "fergusrg@gmail.com"),
               person(given = c("Sergio", "M."),
                      family = "Vicente-Serrano",
                      role = "aut"),
               person(given = "Fernando",
                      family = "Dominguez-Castro",
                      role = "aut"),
               person(given = "Joaquin",
                      family = "Bedia-Jiménez",
                      role = "ctb"))
as necessary.
Maintainer: ‘Liam D. Bailey <liam.bailey@liamdbailey.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Liam", "D."),
                      family = "Bailey",
                      role = c("aut", "cre"),
                      email = "liam.bailey@liamdbailey.com"),
               person(given = "Martijn",
                      family = "van de Pol",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
scatterplotClinData 10.447  0.228  12.556
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  clinDR-package.Rd: DoseFinding
  emaxsim.Rd: Mods
  emaxsimB.Rd: Mods
  fitEmaxB.Rd: rstan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘calc_rci.R’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
cs_anchor 6.26  0.207   9.485
Maintainer: ‘Daewoo Pak <heavyrain.pak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Daewoo",
                      family = "Pak",
                      role = c("aut", "cre"),
                      email = "heavyrain.pak@gmail.com"),
               person(given = "Song",
                      family = "Yang",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘ClinicalTrialSummary-package.Rd’:
    \keyword{Survival analysis, Clinical trials, Hazar [TRUNCATED]
Maintainer: ‘Anu Mishra <anmishra@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anu",
                    family = "Mishra",
                    role = c("aut", "cre"),
                    email = "anmishra@uw.edu")
as necessary.
Maintainer: ‘Mike Malek-Ahmadi <michael.malekahmadi@bannerhealth.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mike",
                      family = "Malek-Ahmadi",
                      role = c("aut", "cre"),
                      email = "michael.malekahmadi@bannerhealth.com"),
               person(given = "Kjera",
                      family = "Schack",
                      role = "aut",
                      email = "kgschack@asu.edu"))
as necessary.
Maintainer: ‘Jim Lemon <drjimlemon@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jim",
                      family = "Lemon,",
                      role = "aut",
                      email = "drjimlemon@gmail.com"),
               person(given = "Jim",
                      family = "Lemon",
                      role = "cre",
                      email = "drjimlemon@gmail.com"))
as necessary.
checkRd: (-1) clinsig.Rd:129: Lost braces
   129 |  be calculated with the measures specified in samp{mct} and samp{disp},
       |                                                   ^
checkRd: (-1) clinsig.Rd:129: Lost braces
   129 |  be calculated with the measures specified in samp{mct} and samp{disp},
       |                                                                 ^
Maintainer: ‘Karandeep Singh <kdpsingh@umich.edu>’

The Description field contains
  embeddings developed by Beam (2018) <arXiv:1804.01486>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  knitPrintListObjects.Rd: knitr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Neel Agarwal <neel.agarwal.216@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Neel",
                    family = "Agarwal",
                    role = c("aut", "cre"),
                    email = "nxa357@case.edu")
as necessary.
Maintainer: ‘Jens Lange <lange.jens@outlook.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Casey M. Jelsema <jelsema.casey@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Haolun Shi <shl2003@connect.hku.hk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Haolun",
                      family = "Shi",
                      role = c("aut", "cre"),
                      email = "shl2003@connect.hku.hk"),
               person(given = "Guosheng",
                      family = "Yin",
                      role = "aut"))
as necessary.
Maintainer: ‘Stephen Reid <sreid1652@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stephen",
                      family = "Reid",
                      role = c("aut", "cre"),
                      email = "sreid1652@gmail.com"),
               person(given = "Robert",
                      family = "Tibshirani",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) print.clogitL1.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) print.clogitL1.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) print.clogitL1.Rd:23: Lost braces in \itemize; meant \describe ?
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cloud_drive_download_bulk.Rd’ ‘cloud_drive_read_bulk.Rd’
    ‘cloud_drive_upload_bulk.Rd’ ‘cloud_drive_write_bulk.Rd’
    ‘cloud_s3_download_bulk.Rd’ ‘cloud_s3_read_bulk.Rd’
    ‘cloud_s3_upload_bulk.Rd’ ‘cloud_s3_write_bulk.Rd’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cloudml_train.Rd: flags
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) cb_participant_count.Rd:13: Lost braces
    13 | \item{query}{A phenotype query defined using the code{\link{phenotype}} function and logic operators (see example below)}
       |                                                      ^
checkRd: (-1) phenotype.Rd:10: Lost braces
    10 | \item{id}{A single phenotype id. Possible phenotyoes can be explored using the code{\link{cb_search_phenotypes}} function}
       |                                                                                    ^
Maintainer: ‘Christian Panse <cp@fgcz.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christian",
                      family = "Panse",
                      role = c("aut", "cre"),
                      email = "cp@fgcz.ethz.ch"),
               person(given = "Ermir",
                      family = "Qeli",
                      role = "aut",
                      email = "ermir.qeli@gmail.com"))
as necessary.
Maintainer: ‘Amandine Pierrot <amandine.m.pierrot@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Amandine", "Pierrot", "with", "contributions", "and/or", "help", "from", "Qiwei"),
                      family = "Yao",
                      role = "aut"),
               person(given = "Haeran",
                      family = "Cho",
                      role = "aut"),
               person(given = "Yannig",
                      family = "Goude",
                      role = "aut"),
               person(given = "Tony",
                      family = "Aldon.",
                      role = "aut"),
               person(given = "Amandine",
                      family = "Pierrot",
                      role = "cre",
                      email = "amandine.m.pierrot@gmail.com"))
as necessary.
checkRd: (-1) clr.Rd:24: Lost braces
    24 | the sense that its Karhunen-Lo\`{e}ve decomposition has qx terms only.}
       |                                 ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘bias_df_combined.R’ ‘create_table_ep_15.R’
    ‘precision_calculate_aov_info.R’
Maintainer: ‘Simiao Ye <simiao.ye@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simiao",
                      family = "Ye",
                      role = c("aut", "cre"),
                      email = "simiao.ye@gmail.com"),
               person(given = "Jingning",
                      family = "Mei",
                      role = "aut"))
as necessary.
Maintainer: ‘Pengyi Yang <yangpy7@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Pengyi",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "yangpy7@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
runClue 8.08  0.126   7.774
Maintainer: ‘Jan Fojtik <9afojtik@gmail.com>’

The Description field contains
  Sobisek, Stachova, Fojtik (2018) <arXiv:1807.05926>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Emmanuel S Tsyawo <estsyawo@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Emmanuel", "S"),
                      family = "Tsyawo",
                      role = c("aut", "cre"),
                      email = "estsyawo@temple.edu"),
               person(given = "Abdul-Nasah",
                      family = "Soale",
                      role = "aut"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.clusEvol.Rd: ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Matthieu Marbac <matthieu.marbac-lourdelle@ensai.fr>’

The Description field contains
  Marbac et al. (2020) <arXiv:2012.14159> are implemented.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Duc-Khanh To <toduc@stat.unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Duc-Khanh",
                      family = "To",
                      role = c("aut", "cre"),
                      email = "toduc@stat.unipd.it",
                      comment = c(ORCID = "0000-0002-4641-0764")),
               person(given = c("with", "contributions", "from", "Gianfranco"),
                      family = "Adimari"),
               person(given = "Monica",
                      family = "Chiogna"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.clus_lme.Rd: ggexport
  plot.clus_opt_thres3.Rd: ggexport
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
clus_opt_thres3 6.875  0.119   9.928
clus_lme        4.438  0.100   5.325
Maintainer: ‘Martí Renedo Mirambell <marti.renedo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Martí", "Renedo"),
                    family = "Mirambell",
                    role = c("aut", "cre"),
                    email = "marti.renedo@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                                   user system elapsed
plot_n_neigh_ecs                                  7.972  0.148  14.256
plot_n_neigh_k_correspondence                     7.958  0.125  14.466
assess_nn_stability                               7.236  0.042  10.113
plot_feature_overall_stability_incremental        7.212  0.056  10.981
plot_feature_per_resolution_stability_incremental 7.174  0.007  12.504
assess_clustering_stability                       5.880  0.151   7.277
plot_feature_stability_mb_facet                   4.476  0.188   9.560
plot_feature_stability_ecs_facet                  4.373  0.089   8.533
assess_feature_stability                          4.166  0.087   5.191
plot_feature_overall_stability_boxplot            3.818  0.014   5.721
plot_feature_per_resolution_stability_boxplot     3.753  0.042   5.600
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
netplot_ClusTCR2 14.153  0.065  19.733
motif_plot       12.954  0.090  15.634
mcl_cluster      12.534  0.218  13.882
ClusTCR          11.231  0.399  13.171
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
clustEff-package 6.961  0.312   8.474
opt.fpcac        6.044  0.054   7.272
Maintainer: ‘Mathijs Deen <m.l.deen@fsw.leidenuniv.nl>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Frederick Novomestky <fnovomes@poly.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Frederick",
                    family = "Novomestky",
                    role = c("aut", "cre"),
                    email = "fnovomes@poly.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dissmutmatrix.Rd: dissplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
features 4.738  0.007   5.698
Maintainer: ‘Weiliang Qiu <weiliang.qiu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Weiliang",
                      family = "Qiu",
                      role = c("aut", "cre"),
                      email = "weiliang.qiu@gmail.com"),
               person(given = "Harry",
                      family = "Joe.",
                      role = "aut",
                      email = "harry@stat.ubc.ca"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
visCluster  4.823  0.150   6.575
clusterData 2.969  0.249   5.449
Maintainer: ‘Gaston Quero <gastonquero@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gaston",
                      family = "Quero",
                      role = c("aut", "cre"),
                      email = "gastonquero@gmail.com"),
               person(given = "Sebastian",
                      family = "Simondi",
                      role = "aut",
                      email = "sebastian.simondi@gmail.com"),
               person(given = c("with", "contributions", "from", "Victoria"),
                      family = "Bonnecarrere",
                      role = "aut"),
               person(given = "Lucia",
                      family = "Gutierrez",
                      role = "aut"))
as necessary.
Found the following files/directories:
  ‘clusterhap_reports’
Maintainer: ‘Jakob Raymaekers <j.raymaekers@maastrichtuniversity.nl>’

The Description field contains
  <arXiv:2010.00950>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) HTKmeans.Rd:62: Lost braces
    62 | \item{centers }{A matrix of cluster centres.}
       |      ^
checkRd: (-1) HTKmeans.Rd:62: Lost braces
    62 | \item{centers }{A matrix of cluster centres.}
       |                ^
checkRd: (-1) HTKmeans.Rd:63: Lost braces
    63 | \item{cluster }{A vector of integers (from 1:\code{k}) indicating the cluster to which each point is allocated.}
       |      ^
checkRd: (-1) HTKmeans.Rd:63: Lost braces
    63 | \item{cluster }{A vector of integers (from 1:\code{k}) indicating the cluster to which each point is allocated.}
       |                ^
checkRd: (-1) HTKmeans.Rd:64: Lost braces
    64 | \item{itnb }{The number of iterations executed until convergence}
       |      ^
checkRd: (-1) HTKmeans.Rd:64: Lost braces
    64 | \item{itnb }{The number of iterations executed until convergence}
       |             ^
checkRd: (-1) HTKmeans.Rd:65: Lost braces
    65 | \item{converged }{Whether the algorithm stopped by converging or through reaching the maximum number of itertions.}
       |      ^
checkRd: (-1) HTKmeans.Rd:65: Lost braces
    65 | \item{converged }{Whether the algorithm stopped by converging or through reaching the maximum number of itertions.}
       |                  ^
Maintainer: ‘Luis Alfonso Perez Martos <lapm0001@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Luis", "Alfonso", "Perez"),
                    family = "Martos",
                    role = c("aut", "cre"),
                    email = "lapm0001@gmail.com",
                    comment = c(ORCID = "0000-0002-5154-6105"))
as necessary.
Maintainer: ‘Evelina Gabasova <egabasova@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Evelina",
                    family = "Gabasova",
                    role = c("aut", "cre"),
                    email = "egabasova@gmail.com")
as necessary.
Maintainer: ‘Sandipan Dutta <sandipan.dutta07@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sandipan",
                      family = "Dutta",
                      role = c("aut", "cre"),
                      email = "sandipan.dutta07@gmail.com"),
               person(given = "Somnath",
                      family = "Datta",
                      role = "aut"))
as necessary.
Maintainer: ‘Rob Tibshirani <tibs@stanford.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Amy",
                      family = "Kapp",
                      role = "aut",
                      email = "Amy_Kapp@hotmail.com"),
               person(given = "Rob",
                      family = "Tibshirani",
                      role = c("aut", "cre"),
                      email = "tibs@stanford.edu"))
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Lampros Mouselimis [aut, cre] (<https://orcid.org/0000-0002-8024-1546>), Conrad Sanderson [cph] (Author of the C++ Armadillo library), Ryan Curtin [cph] (Author of the C++ Armadillo library), Siddharth Agrawal [cph] (Author of the C code of the Mini-Batch-Kmeans algorithm (https://github.com/siddharth-agrawal/Mini-Batch-K-Means)), Brendan Frey [cph] (Author of the matlab code of the Affinity propagation algorithm (for commercial use please contact the author of the matlab code)), Delbert Dueck [cph] (Author of the matlab code of the Affinity propagation algorithm), Vitalie Spinu [ctb] (Github Contributor)’
  Authors@R: ‘Lampros Mouselimis [aut, cre] (ORCID: <https://orcid.org/0000-0002-8024-1546>), Conrad Sanderson [cph] (Author of the C++ Armadillo library), Ryan Curtin [cph] (Author of the C++ Armadillo library), Siddharth Agrawal [cph] (Author of the C code of the Mini-Batch-Kmeans algorithm (https://github.com/siddharth-agrawal/Mini-Batch-K-Means)), Brendan Frey [cph] (Author of the matlab code of the Affinity propagation algorithm (for commercial use please contact the author of the matlab code)), Delbert Dueck [cph] (Author of the matlab code of the Affinity propagation algorithm), Vitalie Spinu [ctb] (Github: Github Contributor)’
Maintainer: ‘Justin Esarey <justin@justinesarey.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Etienne Lord <m.etienne.lord@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Etienne",
                      family = "Lord",
                      role = c("aut", "cre"),
                      email = "m.etienne.lord@gmail.com"),
               person(given = "Matthieu",
                      family = "Willems",
                      role = "aut"),
               person(given = "Francois-Joseph",
                      family = "Lapointe",
                      role = "aut"),
               person(given = "Vladimir",
                      family = "Makarenkov",
                      role = "aut"))
as necessary.
Maintainer: ‘Oliver Pfaffel <opfaffel@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Oliver",
                    family = "Pfaffel",
                    role = c("aut", "cre"),
                    email = "opfaffel@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
divisive_clustering      8.917  0.044  10.092
gaussian_mixture         2.809  5.987  10.742
agglomerative_clustering 6.387  0.086   7.427
checkRd: (-1) dtmvnom.Rd:30: Escaped LaTeX specials: \&
Maintainer: ‘Gero Szepannek <gero.szepannek@web.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gero",
                      family = "Szepannek",
                      role = c("aut", "cre"),
                      email = "gero.szepannek@web.de"),
               person(given = "Rabea",
                      family = "Aschenbruck",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
kmeansvar 4.719      0   6.203
Maintainer: ‘Muhammad Atif <muhammad96_atif@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Muhammad",
                    family = "Atif",
                    role = c("aut", "cre"),
                    email = "muhammad96_atif@yahoo.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
Transition 4.998  0.147   6.409
Maintainer: ‘Angelos Markos <amarkos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Angelos",
                      family = "Markos",
                      role = c("aut", "cre"),
                      email = "amarkos@gmail.com"),
               person(given = c("Alfonso", "Iodice"),
                      family = "D'Enza",
                      role = "aut"),
               person(given = "Michel",
                      family = "van de Velden",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
global_bootclus 4.351  0.042   6.025
cluspca         4.091  0.040   6.243
Maintainer: ‘Dan S. Reznik <dreznik@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dan", "S."),
                    family = "Reznik",
                    role = c("aut", "cre"),
                    email = "dreznik@gmail.com")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Evelyne Vigneau <evelyne.vigneau@oniris-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Evelyne",
                      family = "Vigneau",
                      role = c("aut", "cre"),
                      email = "evelyne.vigneau@oniris-nantes.fr"),
               person(given = "Mingkun",
                      family = "Chen",
                      role = "ctb"),
               person(given = "Veronique",
                      family = "Cariou",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
CLV3W 4.795  0.003   5.671
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
clustvarsel 4.27  0.225   5.342
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  clusvisMixmod.Rd: MixmodCluster-class
  clusvisVarSelLCM.Rd: VSLCMresults-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Vasyl Pihur <vpihur@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guy",
                      family = "Brock",
                      role = "aut",
                      email = "guy.brock@louisville.edu"),
               person(given = "Vasyl",
                      family = "Pihur",
                      role = c("aut", "cre"),
                      email = "vpihur@gmail.com"),
               person(given = "Susmita",
                      family = "Datta",
                      role = "aut",
                      email = "susmita.datta@louisville.edu"),
               person(given = "Somnath",
                      family = "Datta",
                      role = "aut",
                      email = "somnath.datta@louisville.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
clValid 7.029  0.156   9.688
BHI     6.023  0.583   8.972
Maintainer: ‘Lukasz Nieweglowski <wookashn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lukasz",
                    family = "Nieweglowski",
                    role = c("aut", "cre"),
                    email = "wookashn@gmail.com")
as necessary.

Found the following (possibly) invalid file URIs:
  URI: ml-pub.inf.ethz.ch/publications/papers/2004/lange.neco_stab.03.pdf
    From: man/cluster_stability.Rd
  URI: ml-pub.inf.ethz.ch/publications/papers/2004/lange.neco_stab.03.pdf
    From: man/cluster_stability_usr.Rd
  URI: ml-pub.inf.ethz.ch/publications/papers/2004/lange.neco_stab.03.pdf
    From: man/dot_product.Rd
  URI: ml-pub.inf.ethz.ch/publications/papers/2004/lange.neco_stab.03.pdf
    From: man/similarity_index.Rd
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cluster_stability.Rd: agnes
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Olaf Mersmann <olafm@statistik.tu-dortmund.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Heike",
                      family = "Trautmann",
                      role = "aut",
                      email = "trautmann@statistik.tu-dortmund.de"),
               person(given = "Olaf",
                      family = "Mersmann",
                      role = c("aut", "cre"),
                      email = "olafm@statistik.tu-dortmund.de"),
               person(given = "David",
                      family = "Arnu",
                      role = "aut",
                      email = "david.arnu@statistik.tu-dortmund.de"))
as necessary.
checkRd: (-1) CMAPSS.Rd:10: Lost braces
    10 | \item \code{train}{ a list of class "hhsmm.data" as the train dataset}
       |                   ^
checkRd: (-1) CMAPSS.Rd:11: Lost braces
    11 | \item \code{test}{ a list of class "hhsmm.data" as the test dataset}
       |                  ^
checkRd: (-1) CMAPSS.Rd:12: Lost braces
    12 | \item \code{subsets}{ a matrix containig the number of units in each subset of the CMAPSS data set (FD001-FD004) for the train and test datasets}
       |                     ^
Maintainer: ‘Raphaël Bonnet <raphael.bonnet@univ-cotedazur.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Raphaël",
                      family = "Bonnet",
                      role = c("aut", "cre"),
                      email = "raphael.bonnet@univ-cotedazur.fr"),
               person(given = "Jean-François",
                      family = "Peyron",
                      role = c("aut", "ths")))
as necessary.
checkRd: (-1) cmb.search.Rd:50: Lost braces; missing escapes or markup?
    50 |   \item{order}{applied conditioning order {length p}}
       |                                           ^
'library' or 'require' calls not declared from:
  ‘HDclassif’ ‘MixSim’ ‘mclust’
Maintainer: ‘Matthew T. Pratola <mpratola@stat.osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Matthew", "T."),
                    family = "Pratola",
                    role = c("aut", "cre", "cph"),
                    email = "mpratola@stat.osu.edu")
as necessary.
checkRd: (-1) gp.realize.Rd:20: Lost braces; missing escapes or markup?
    20 | The list \code{l.v} is created by \code{makedistlist()} from a {n x p} design matrix on which to generate the unconditional GP realization.  The correlation parameters take on values in \code{(0,1)} and use the Gaussian correlation model, calculated as \code{rho^d(xi,xj)^2}.  This helper function is used to create the demonstration data used in the example for \code{calibrate()}.
       |                                                                ^
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
calibrate 6.049  0.071   8.329
Maintainer: ‘Spencer Nystrom <nystromdev@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/snystrom/cmdfun
which should likely be
  https://github.com/snystrom/cmdfun/issues
instead.
Maintainer: ‘Simon Mak <sm769@duke.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Simon",
                    family = "Mak",
                    role = c("aut", "cre"),
                    email = "sm769@duke.edu")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Felix Held <felix.held@gmail.com>’

The Description field contains
  al. (2014) <arXiv:1312.5921>.  The package can also be used to learn
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘David Cortes <david.cortes.rivera@gmail.com>’

The Description field contains
  extensions of the original model (Cortes, (2018) <arXiv:1809.00366>)
  'implicit features' (Rendle, Zhang, Koren, (2019) <arXiv:1905.01395>),
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
CMF.from.model.matrices 4.193  0.197   5.294
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
PARL 5.408  0.074   6.045
Maintainer: ‘Anh Tuan Bui <atbui@u.northwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Anh", "Tuan"),
                    family = "Bui",
                    role = c("aut", "cre"),
                    email = "atbui@u.northwestern.edu")
as necessary.

The Description field contains
  (2021) <arXiv:2111.13646> or closed-form solution in Bui (2022)
  (2021) <arXiv:2111.13646>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Nathaniel E. Helwig <helwig@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nathaniel", "E."),
                    family = "Helwig",
                    role = c("aut", "cre"),
                    email = "helwig@umn.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  mlsei.Rd: solve.QP
  mlsun.Rd: solve.QP
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
CMMs 4.463  0.085   5.184
checkRd: (-1) bvp.Rd:24: Lost braces
    24 | differential equations.  The code{midptivp} method solves initial
       |                                  ^
checkRd: (-1) ivp.Rd:38: Lost braces
    38 | differential equations.  The code{midptivp} method solves initial
       |                                  ^
checkRd: (-1) ivpsys.Rd:29: Lost braces
    29 | differential equations.  The code{midptivp} method solves initial
       |                                  ^
Maintainer: ‘LiLin-Yin <ylilin@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(family = "LiLin-Yin",
                    role = c("aut", "cre"),
                    email = "ylilin@163.com")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/YinLiLin/CMplot/issues/new
which should likely be
  https://github.com/YinLiLin/CMplot/issues/new/issues
instead.
Maintainer: ‘Yiran Zhang <yiz038@health.ucsd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yiran",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "yiz038@health.ucsd.edu"),
               person(given = "Ronghui",
                      family = "Xu",
                      role = "aut"))
as necessary.
Maintainer: ‘Stephan Dlugosz <stephan.dlugosz@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stephan",
                      family = "Dlugosz",
                      role = c("aut", "cre"),
                      email = "stephan.dlugosz@googlemail.com"),
               person(given = "Limin",
                      family = "Peng",
                      role = "aut"),
               person(given = "Ruosha",
                      family = "Li",
                      role = "aut"),
               person(given = "Shuolin",
                      family = "Shi",
                      role = "ctb"))
as necessary.
checkRd: (-1) plot.predict.crrQR.Rd:18: Escaped LaTeX specials: \#
checkRd: (-1) plot.predict.crrQR.Rd:22: Escaped LaTeX specials: \#
Maintainer: ‘Bob Gray <gray@jimmy.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bob",
                    family = "Gray",
                    role = c("aut", "cre"),
                    email = "gray@jimmy.harvard.edu")
as necessary.
Maintainer: ‘Wangqian Ju <wju@iastate.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
compute_diff_phase   3.303  0.106    5.14
extract_feature_cmps 2.892  0.051    5.23
Maintainer: ‘Andrey Paramonov <paramon@acdlabs.ru>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrey",
                    family = "Paramonov",
                    role = c("aut", "cre"),
                    email = "paramon@acdlabs.ru")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
wfldmean 9.558  0.197  15.496
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘basis.R’
Maintainer: ‘Mohsin Vindhani <mohsin@utiligize.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cnaOpt.Rd: configTable, rreduce, condTbl, cna
  conCovOpt.Rd: configTable, cna
  conCovOpt_utils.Rd: rreduce, condTbl
  ereduce.Rd: full.ct
  findOutcomes.Rd: configTable, cna, selectCases, full.ct
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
findOutcomes 7.185  0.045   9.541
cnaOpt       4.597  0.075   7.232
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
cna           5.361  1.377   8.064
cnaControl    6.078  0.521   8.003
randomConds   5.108  0.159   6.351
cna-solutions 3.961  0.694   7.200
Maintainer: ‘Xiaotian Zhu <xiaotian.zhu.psualum@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiaotian",
                    family = "Zhu",
                    role = c("aut", "cre"),
                    email = "xiaotian.zhu.psualum@gmail.com")
as necessary.
Maintainer: ‘Ana Belen Nieto Librero <ananieto@usal.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ana", "Belen", "Nieto"),
                      family = "Librero",
                      role = c("aut", "cre"),
                      email = "ananieto@usal.es"),
               person(given = "Priscila",
                      family = "Willems",
                      role = "aut",
                      email = "pwillems@bariloche.inta.gov.ar"),
               person(given = c("Purificacion", "Galindo"),
                      family = "Villardon",
                      role = "aut",
                      email = "pgalindo@usal.es"))
as necessary.
checkRd: (-1) cnlt.reg.Rd:43: Lost braces
    43 | \emph{Technometrics}, bold{60} (1), 48-60, DOI 10.1080/00401706.2017.1281846.\cr\cr
       |                           ^
checkRd: (-1) fwtnppermC.Rd:35: Lost braces
    35 | Given \eqn{n} points on a line, \env{x}, each with a corresponding env{f} value this function computes
       |                                                                       ^
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
checkConsistency     7.311  0.239   8.918
plotPercentileSeries 4.828  0.000   5.736
rawTable             4.731  0.004   5.980
elfe                 3.486  0.013   5.561
Maintainer: ‘Guoli Sun <guolisun87@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alex",
                      family = "Krasnitz",
                      role = "aut"),
               person(given = "Guoli",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "guolisun87@gmail.com"))
as necessary.
Maintainer: ‘JiaSheng Zhang <zhangjiasheng0509@outlook.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "JiaSheng",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zhangjiasheng0509@outlook.com",
                      comment = "<zhangjiasheng0509@outlook.com>"),
               person(given = "SiWei",
                      family = "Deng",
                      role = "aut"),
               person(given = "Feng",
                      family = "Yu",
                      role = "aut"),
               person(given = "YangYang",
                      family = "Zhang",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
ksample_test 7.599      0  10.491
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
cvfit_WTSMTH 6.635  0.033   8.628
Maintainer: ‘James Dalgleish <james.dalgleish@nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Dalgeish",
                      role = "aut"),
               person(given = "Yonghong",
                      family = "Wang",
                      role = "aut"),
               person(given = "Jack",
                      family = "Zhu",
                      role = "aut"),
               person(given = "Paul",
                      family = "Meltzer",
                      role = "aut"),
               person(given = "James",
                      family = "Dalgleish",
                      role = "cre",
                      email = "james.dalgleish@nih.gov"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                    user system elapsed
writeMeltedChromosomalMatrixToDisk 5.502  0.185    6.09
Maintainer: ‘Emmanuel Paradis <Emmanuel.Paradis@ird.fr>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
coat-methods 8.185  0.185   10.54
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
bal.plot 5.353  0.117   6.781
Maintainer: ‘Alessandra Cabassi <alessandra.cabassi@mrc-bsu.cam.ac.uk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
coca 3.969  0.095   6.061
Maintainer: ‘Birk Diedenhofen <mail@birkdiedenhofen.de>’

The Description field contains
  http://comparingcronbachalphas.org. A plugin for the R GUI and IDE
  RKWard is included. Please install RKWard from https:// rkward.kde.org
Please enclose URLs in angle brackets (<...>).
Examples with CPU (user + system) or elapsed time > 5s
                                user system elapsed
coda_coxnet                   11.982  0.408  15.368
plot_survcurves                6.266  0.012   7.369
coda_glmnet_longitudinal_null  4.945  0.031   6.897
plot_riskscore                 4.674  0.044   5.617
explore_lr_longitudinal        4.541  0.021   6.022
Maintainer: ‘Elliott Gordon-Rodriguez <eg2912@columbia.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) educFM.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) educFM.Rd:28: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
                                   user system elapsed
TauAndParameters_EstParmFunc_FBM 13.769  0.126  17.132
Estimate_Param_EstParmFunc        4.763  0.010   5.914
Estimate_Param_FBM                4.585  0.051   5.972
StudyingParam                     0.094  0.039   8.514
FromVectorToMatrix_BPBM           0.055  0.012   9.033
Maintainer: ‘Martyn Plummer <martyn.plummer@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Lars Ronnegard <lrn@du.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lars",
                    family = "Ronnegard",
                    role = c("aut", "cre"),
                    email = "lrn@du.se")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cb_summary_stats_numeric.R’
Maintainer: ‘Gabriel Becker <gabembecker@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Duncan", "Temple"),
                      family = "Lang",
                      role = "aut"),
               person(given = "Roger",
                      family = "Peng",
                      role = "aut"),
               person(given = "Deborah",
                      family = "Nolan",
                      role = "aut"),
               person(given = "Gabriel",
                      family = "Becker",
                      role = c("aut", "cre"),
                      email = "gabembecker@gmail.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  create_codemeta.Rd: write_json
  write_codemeta.Rd: write_json
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Daniel Kaschek <daniel.kaschek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Kaschek",
                    role = c("aut", "cre"),
                    email = "daniel.kaschek@gmail.com")
as necessary.
Maintainer: ‘Luke Tierney <luke-tierney@uiowa.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Luke",
                    family = "Tierney",
                    role = c("aut", "cre"),
                    email = "luke-tierney@uiowa.edu")
as necessary.
Maintainer: ‘Deisy Morselli Gysi <deisy.ccnr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Deisy", "Morselli"),
                      family = "Gysi",
                      role = c("aut", "cre"),
                      email = "deisy.ccnr@gmail.com"),
               person(given = c("Tiago", "de", "Miranda"),
                      family = "Fragoso",
                      role = "aut"),
               person(given = "Eivind",
                      family = "Almaas",
                      role = "aut"),
               person(given = "Katja",
                      family = "Nowick.",
                      role = "aut"))
as necessary.

The Description field contains
  <arXiv:1802.00828>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
Maintainer: ‘Zhiyong Zhang <johnnyzhz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhiyong",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "johnnyzhz@gmail.com"),
               person(given = "Ke-Hai",
                      family = "Yuan",
                      role = "aut"))
as necessary.
Maintainer: ‘Jared P. Lander <packages@jaredlander.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jared", "P."),
                    family = "Lander",
                    role = c("aut", "cre"),
                    email = "packages@jaredlander.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  coefplot.Rd: ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
coefplot  9.454  0.233  12.617
multiplot 6.241  0.005   6.578
Maintainer: ‘Gavin L. Simpson <ucfagls@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘David W. Roberts <droberts@montana.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("David", "W."),
                    family = "Roberts",
                    role = c("aut", "cre"),
                    email = "droberts@montana.edu")
as necessary.
Maintainer: ‘Alessio Albanese <alessio.albanese@wur.nl>’

The Description field contains
  W., and Behrouzi, P. (2024) <arXiv:2403.18602>. Build multiple networks
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
availablePlotColumns  11.848  0.345  17.446
availableTableColumns  9.566  0.096  12.753
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘CreateCohortExplorerApp.R’
Maintainer: ‘Elias Laurin Meyer <elias.meyer@meduniwien.ac.at>’

The Description field contains
  in Meyer et al. <arXiv:2202.02182>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
plot_trial 7.804  0.122  11.869
Maintainer: ‘Jari Haukka <jari.haukka@helsinki.fi>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jari",
                    family = "Haukka",
                    role = c("aut", "cre"),
                    email = "jari.haukka@helsinki.fi")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  boxesLx.Rd: grViz
  mkratetable.Rd: survival, pyears
  plotcuminc.Rd: survival, pyears
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Wilmer Martinez <womartin@asu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Wilmer",
                    family = "Martinez",
                    role = c("aut", "cre"),
                    email = "womartin@asu.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘coincident_profile.Rd’:
    http://dx.doi.org/10.1016/j.spl.2015.11.008
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘utils.R’
Maintainer: ‘Philipp Aschersleben <aschersleben@statistik.tu-dortmund.de>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘monitorCointegration.Rd’:
    http://dx.doi.org/10.2139/ssrn.2624657
  File ‘monitorStationarity.Rd’:
    http://dx.doi.org/10.2139/ssrn.2624657
Maintainer: ‘Philipp Aschersleben <aschersleben@statistik.tu-dortmund.de>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘cointReg.Rd’:
    http://dx.doi.org/10.2307/2297545
    http://dx.doi.org/10.2307/2298004
    http://dx.doi.org/10.1017/S0266466600004217
    http://dx.doi.org/10.2307/2951763
    http://dx.doi.org/10.1016/j.jeconom.2013.10.015
  File ‘cointRegD.Rd’:
    http://dx.doi.org/10.2307/2298004
    http://dx.doi.org/10.1017/S0266466600004217
    http://dx.doi.org/10.2307/2951763
  File ‘cointRegFM.Rd’:
    http://dx.doi.org/10.2307/2297545
  File ‘cointRegIM.Rd’:
    http://dx.doi.org/10.1016/j.jeconom.2013.10.015
  File ‘getBandwidth.Rd’:
    http://dx.doi.org/10.2307/2938229
    http://dx.doi.org/10.2307/2297912
Maintainer: ‘M. Helena Goncalves <mhgoncal@ualg.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("M.", "Helena"),
                      family = "Goncalves",
                      role = c("aut", "cre"),
                      email = "mhgoncal@ualg.pt"),
               person(given = c("M.", "Salome"),
                      family = "Cabral",
                      role = "aut"),
               person(given = c("apart", "from", "a", "set", "of", "Fortran-77", "subroutines", "written", "by", "R."),
                      family = "Piessens",
                      role = "aut"),
               person(given = "E.",
                      family = "de Doncker",
                      role = "aut"),
               person(given = c("belonging", "to", "the", "suite"),
                      family = "\"Quadpack\".",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘Krishanu Mukherjee <toton1181@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Krishanu",
                    family = "Mukherjee",
                    role = c("aut", "cre"),
                    email = "toton1181@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
across 5.591  0.203   7.313
Maintainer: ‘Nathan Levett <nathan.a.z.levett@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/Skenvy/Collatz/issues/new/choose
which should likely be
  https://github.com/Skenvy/Collatz/issues/new/choose/issues
instead.
File ‘collections/libs/collections.so’:
  Found non-API calls to R: ‘PRENV’, ‘SET_CLOENV’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Steve Condylios <steve.condylios@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Steve",
                    family = "Condylios",
                    role = c("aut", "cre"),
                    email = "steve.condylios@gmail.com",
                    comment = c(ORCID = "0000-0003-0599-844X"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘collinear.R’ ‘cor_cramer_v.R’ ‘cor_df.R’ ‘cor_select.R’ ‘f_auc.Rd’
    ‘f_r2.Rd’ ‘f_r2_counts.Rd’ ‘f_v.Rd’ ‘f_v_rf_categorical.Rd’
    ‘identify.R’ ‘model_formula.R’ ‘preference_order.R’
    ‘preference_order_methods.R’ ‘target_encoding_methods.R’ ‘validate.R’
    ‘vif_df.R’ ‘vif_select.R’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
collinear        2.743  0.163   7.773
cor_matrix       1.461  0.174   6.799
preference_order 0.917  0.079   5.757
Maintainer: ‘Kaiyin Zhong <kindlychung@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kaiyin",
                      family = "Zhong",
                      role = c("aut", "cre"),
                      email = "kindlychung@gmail.com"),
               person(given = "Fan",
                      family = "Liu",
                      role = "aut"))
as necessary.

File 'R/collUtils-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘collUtils-package.Rd’:
    \keyword{ 
      GWAS
      Compound heterozygosity
      Genomics
      } [TRUNCATED]
Maintainer: ‘Thiyanga Talagala <thiyanga.talagala@monash.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thiyanga",
                    family = "Talagala",
                    role = c("aut", "cre"),
                    email = "thiyanga.talagala@monash.edu")
as necessary.
Maintainer: ‘Hui Zhang <hzhang@northwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jiahui",
                      family = "Xu",
                      role = "aut"),
               person(given = "Xueyan",
                      family = "Liu",
                      role = "aut"),
               person(given = "Lin",
                      family = "Li",
                      role = "aut"),
               person(given = "Cheng",
                      family = "Cheng",
                      role = "aut"),
               person(given = "Hui",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "hzhang@northwestern.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
nsincd       3.983  0.066   5.385
plot.colocal 3.968  0.044   5.093
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
chromsearch 4.277  0.044   5.315
colocalized 3.970  0.007   5.255
Maintainer: ‘Mahmoud Ahmed <mahmoud.s.fahmy@students.kasralainy.edu.eg>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  roi_select.Rd: imager
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) getHistList.Rd:32: Lost braces; missing escapes or markup?
    32 | ({FALSE})? If a bin is empty, the center of the bin is returned as the
       |  ^
checkRd: (-1) imageClusterPipeline.Rd:82: Lost braces; missing escapes or markup?
    82 | of the bin ({FALSE})? If a bin is empty, the center of the bin is returned
       |             ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘simulate_populations.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot_colors_3d.Rd: plotly
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Damiano Fantini <damiano.fantini@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Damiano",
                    family = "Fantini",
                    role = c("aut", "cre"),
                    email = "damiano.fantini@gmail.com")
as necessary.

File 'R/colorhcplot-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
map_single    5.459  0.141   6.267
map_multiples 4.510  0.139   5.527
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  InterpolateColorFun.Rd: ggplot2
  OrderDataTSP.Rd: TSP
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
OptimizeBiColor 4.127  0.012   5.752
Maintainer: ‘Andrew Heiss <andrew@andrewheiss.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Alan Inglis <alan.n.inglis@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alan",
                    family = "Inglis",
                    role = c("aut", "cre"),
                    email = "alan.n.inglis@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
img2pal 3.281    0.5   5.214
checkRd: (-1) colour_values.Rd:143: Lost braces in \itemize; meant \describe ?
checkRd: (-1) colour_values.Rd:144: Lost braces in \itemize; meant \describe ?
checkRd: (-1) colour_values_rgb.Rd:143: Lost braces in \itemize; meant \describe ?
checkRd: (-1) colour_values_rgb.Rd:144: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Yang Ni <yni@stat.tamu.edu>’

The Description field contains
  categorical data. See Ni, Y. (2022) <arXiv:2209.08579> "Bivariate
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘c4a.Rd’ ‘c4a_plot_hcl_space.R’ ‘c4a_table.R’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
c4a_data 6.334  0.079   7.517
Unexported object imported by a ':::' call: ‘crayon:::mypaste’
  See the note in ?`:::` about the use of this operator.
Maintainer: ‘Andreas Muehling <andreas.muehling@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Muehling",
                    role = c("aut", "cre"),
                    email = "andreas.muehling@tum.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
visual_prep 3.913  0.552   5.204
Maintainer: ‘Minghui Wang <m.h.wang@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Minghui",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "m.h.wang@live.com"),
               person(given = "Yiyuan",
                      family = "Liu",
                      role = "aut"),
               person(given = "Shizhong",
                      family = "Han",
                      role = "aut"))
as necessary.
Maintainer: ‘Breya McGlown <bswlker2@memphis.edu>’

The Description field contains
  Heard & Rubin-Delanchy (2017) <arXiv:1707.06897>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Problems with news in ‘NEWS.md’:
No news entries found.
Maintainer: ‘Vince Carey <stvjc@channing.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Scott",
                      family = "Chasalow",
                      role = "aut"),
               person(given = "Vince",
                      family = "Carey",
                      role = "cre",
                      email = "stvjc@channing.harvard.edu"))
as necessary.
Malformed Description field: should contain one or more complete sentences.
checkRd: (-1) xsimplex.Rd:6: Lost braces; missing escapes or markup?
     6 |              Generates all points on a {p,n} simplex lattice (i.e. a p-part
       |                                        ^
Maintainer: ‘Florian Ziel <florian.ziel@uni-due.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Florian",
                    family = "Ziel",
                    role = c("aut", "cre"),
                    email = "florian.ziel@uni-due.de")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
CI_test 7.625  0.426   5.354
Maintainer: ‘Mohamed Laib <laib.med@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mohamed",
                      family = "Laib",
                      role = c("aut", "cre"),
                      email = "laib.med@gmail.com"),
               person(given = "Imane",
                      family = "Rezgui",
                      role = "aut"),
               person(given = "Zebida",
                      family = "Gheribi-Aoulmi",
                      role = "aut"),
               person(given = "Herve",
                      family = "Monod",
                      role = "aut"))
as necessary.

The URL field contains the following bad parts:
  'www.sites.google.com/site/mohamedlaibwebpage'
The URL field should be a list of URLs separated by commas or
whitespace.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘GPBIB4A.Rd’:
    http://dx.doi.org/10.4236/am.2015.62024
  File ‘GPBIB4B.Rd’:
    http://dx.doi.org/10.4236/am.2015.62024
  File ‘GPBIB5.Rd’:
    http://dx.doi.org/10.4236/am.2015.62024
  File ‘GPBIB7A.Rd’:
    http://dx.doi.org/10.4236/am.2015.62024
  File ‘GPBIB7B.Rd’:
    http://dx.doi.org/10.4236/am.2015.62024
Maintainer: ‘Benjamin Blonder <benjamin.blonder@berkeley.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Benjamin",
                    family = "Blonder",
                    role = c("aut", "cre"),
                    email = "benjamin.blonder@berkeley.edu")
as necessary.
Found the following files/directories:
  ‘cometExactTest_plot.pdf’
Maintainer: ‘Antonio Canale <antonio.canale@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Canale",
                      role = c("aut", "cre"),
                      email = "antonio.canale@unipd.it"),
               person(given = "Daniele",
                      family = "Durante",
                      role = "ctb"),
               person(given = "Arianna",
                      family = "Falcioni",
                      role = "aut"),
               person(given = "Luisa",
                      family = "Galtarossa",
                      role = "aut"),
               person(given = "Tommaso",
                      family = "Rigon",
                      role = "ctb"))
as necessary.
checkRd: (-1) BMD.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) BMD.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) add.risk.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) add.risk.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:67-68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) comire.gibbs.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘S. Gorsky <sgorsky@umass.edu>’

The Description field contains
  information, see Gorsky, Chan and Ma (2020) <arXiv:2001.06451>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
COMMA_EM 4.163  0.131   5.453
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
betaRegDisp 6.238  0.217   8.347
autosimi    4.307  0.237   6.100
standExtent 2.415  0.042   5.951
checkRd: (-1) count_pairs.Rd:19-20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:21-22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) count_pairs.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) entropy.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) score_log_nonparam.Rd:36: Lost braces; missing escapes or markup?
    36 | {0, 1}.
       | ^
checkRd: (-1) score_log_semiparam.Rd:40: Lost braces; missing escapes or markup?
    40 | values in {0, 1}.
       |           ^
checkRd: (-1) sort_pairs.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sort_pairs.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
hms 3.883  0.108   6.812
Maintainer: ‘Kornelius Rohmeyer <rohmeyer@small-projects.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kornelius",
                      family = "Rohmeyer",
                      role = c("aut", "cre"),
                      email = "rohmeyer@small-projects.de",
                      comment = c(ROR = "R package")),
               person(given = c("see", "COPYRIGHTS", "file", "for", "the", "authors", "of", "the", "java"),
                      family = "libraries",
                      role = "aut"))
as necessary.
Maintainer: ‘Jia-Han Shih <tommy355097@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jia-Han",
                    family = "Shih",
                    role = c("aut", "cre"),
                    email = "tommy355097@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) hmm.Rd:47-55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:56-62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:63-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:71-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:75-78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:79-84: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:85-89: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:95-103: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:104-107: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:108-111: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:112-118: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:119-129: Lost braces in \itemize; meant \describe ?
checkRd: (-1) hmm.Rd:130-133: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
multiassoc 4.512   0.14   5.609
Maintainer: ‘Ana C. Braga <acb@dps.uminho.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ana", "C.", "Braga", "with", "contributions", "from", "Hugo"),
                      family = "Frade",
                      role = "aut"),
               person(given = "Sara",
                      family = "Carvalho",
                      role = "aut"),
               person(given = c("Andre", "M."),
                      family = "Santiago",
                      role = "aut"),
               person(given = c("Ana", "C."),
                      family = "Braga",
                      role = "cre",
                      email = "acb@dps.uminho.pt"))
as necessary.
Maintainer: ‘Christina Heinze-Deml <heinzedeml@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christina",
                      family = "Heinze-Deml",
                      role = c("aut", "cre"),
                      email = "heinzedeml@stat.math.ethz.ch"),
               person(given = "Nicolai",
                      family = "Meinshausen",
                      role = "aut",
                      email = "meinshausen@stat.math.ethz.ch"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
getRanking 3.954  0.253   7.006
Maintainer: ‘Le Kang <Le.Kang@vcuhealth.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Le Kang",
                      role = c("aut", "cre"),
                      email = "le.kang@vcuhealth.org"),
               person(given = "Weijie",
                      family = "Chen",
                      role = "aut"))
as necessary.

Problems when reading CITATION file:
  It is recommended to use ‘given’ instead of ‘middle’.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘compareMCMCs.R’ ‘metrics-addMetrics.R’
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
best_model_finder 5.832  0.059   7.468
Maintainer: ‘Paul Murrell <p.murrell@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paul",
                    family = "Murrell",
                    role = c("aut", "cre"),
                    email = "p.murrell@auckland.ac.nz")
as necessary.
checkRd: (-1) glass.Rd:10: Lost braces
    10 | \item{item}{factor}{200 levels - which item the measurements came from}
       |                    ^
checkRd: (-1) glass.Rd:11-12: Lost braces
    11 | \item{fragment}{factor}{4 levels - which of the four fragments from each item the observations were made
       |                        ^
checkRd: (-1) glass.Rd:13: Lost braces
    13 | \item{logNaO}{numeric}{log of sodium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:14: Lost braces
    14 | \item{logMgO}{numeric}{log of magnesium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:15: Lost braces
    15 | \item{logAlO}{numeric}{log of aluminium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:16: Lost braces
    16 | \item{logSiO}{numeric}{log of silicon concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:17: Lost braces
    17 | \item{logKO}{numeric}{log of potassium concentration to oxygen concentration}
       |                      ^
checkRd: (-1) glass.Rd:18: Lost braces
    18 | \item{logCaO}{numeric}{log of calcium concentration to oxygen concentration}
       |                       ^
checkRd: (-1) glass.Rd:19: Lost braces
    19 | \item{logFeO}{numeric}{log of iron concentration to oxygen concentration}
       |                       ^
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
two.level.normal.LR  4.430  0.059   5.509
two.level.density.LR 4.410  0.016   6.343
two.level.components 4.357  0.028   5.490
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
Overall.test 4.996  0.028   9.288
Maintainer: ‘Samuel W.K. Wong <samuel.wong@uwaterloo.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Samuel", "W.K."),
                      family = "Wong",
                      role = c("aut", "cre"),
                      email = "samuel.wong@uwaterloo.ca"),
               person(given = "Dylan",
                      family = "Shi",
                      role = "aut"),
               person(given = "Megan",
                      family = "Hazlett",
                      role = "aut"),
               person(given = "Jasmine",
                      family = "Cheng",
                      role = "aut"))
as necessary.
checkRd: (-1) atomdeps.Rd:9: Lost braces
     9 |  \item{"tangle"}: {Dihedral angle defined by atoms A-B-C-D as described below. \code{NA}'s represent the free side chain dihedral angles \emph{chi} for that amino acid.}
       |                   ^
checkRd: (-1) atomdeps.Rd:10: Lost braces; missing escapes or markup?
    10 |  \item{"names"}: {The component atoms of the amino acid side chain.  Represents atom D in the dihedral.}
       |                  ^
checkRd: (-1) atomdeps.Rd:11: Lost braces; missing escapes or markup?
    11 |  \item{"matx"}: {The names of atoms A,B,C in the dihedral, with rows corresponding to the atoms in "names".}
       |                 ^
checkRd: (-1) atomdeps.Rd:12: Lost braces; missing escapes or markup?
    12 |  \item{"bangle"}: {Planar bond angle formed between B-C-D}
       |                   ^
checkRd: (-1) atomdeps.Rd:13: Lost braces; missing escapes or markup?
    13 |  \item{"blength"}: {Bond length between C-D}
       |                    ^
Maintainer: ‘Saralees Nadarajah <Saralees.Nadarajah@manchester.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Wiegand",
                      role = "aut"),
               person(given = "Saralees",
                      family = "Nadarajah",
                      role = c("aut", "cre"),
                      email = "saralees.nadarajah@manchester.ac.uk"))
as necessary.
checkRd: (-1) keener.Rd:82: Lost braces; missing escapes or markup?
    82 | a_{ij} = (S_ij + 1) / (S_ij + S_ji + 2). This step should make comparing
       |   ^
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
ci_ogwa 7.234  0.118   8.875
Maintainer: ‘M. A. J. Zondervan-Zwijnenburg <m.zondervan@vilans.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("M.", "A.", "J."),
                    family = "Zondervan-Zwijnenburg",
                    role = c("aut", "cre"),
                    email = "m.zondervan@vilans.nl")
as necessary.
Maintainer: ‘William Ryan <wryan1@binghamton.edu>’

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  rlm.Rd: lqs
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Albert Dorador <albert.dorador@estudiant.upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Albert",
                      family = "Dorador",
                      role = c("aut", "cre"),
                      email = "albert.dorador@estudiant.upc.edu"),
               person(given = c("Uffe", "Høgsbro"),
                      family = "Thygesen",
                      role = "aut"))
as necessary.
Maintainer: ‘Michał Krassowski <krassowski.michal+r@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
bootcoefs      5.385  0.196   7.252
plot.bootcoefs 4.914  0.115   6.067
Maintainer: ‘Tony Pourmohamad <tpourmohamad@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Andrew Raim <andrew.raim@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Kimberly", "Sellers", "Thomas", "Lotze", "<thomas.lotze@thomaslotze.com>", "Andrew", "Raim"),
                      family = "<andrew.raim@gmail.com>",
                      role = "aut",
                      email = "andrew.raim@gmail.com"),
               person(given = "Andrew",
                      family = "Raim",
                      role = "cre",
                      email = "andrew.raim@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
DStudy 5.756  0.313   7.878
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
DStudy 5.783  0.498   8.668
Maintainer: ‘K. Gerald van den Boogaart <support@boogaart.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("K.", "Gerald"),
                      family = "van den Boogaart",
                      role = c("aut", "cre"),
                      email = "boogaart@hzdr.de"),
               person(given = "Raimon",
                      family = "Tolosana-Delgado",
                      role = "aut"),
               person(given = "Matevz",
                      family = "Bren",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  codadendrogram.Rd: histogram
  pairwisePlot.Rd: lmrob
  pwlrPlot.Rd: lmrob
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
SimulatedAmounts 5.785  0.052   7.109
Maintainer: ‘Zengchao Hao <z.hao4univ@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zengchao",
                    family = "Hao",
                    role = c("aut", "cre"),
                    email = "z.hao4univ@gmail.com")
as necessary.
Maintainer: ‘Bowen Liu <bowen.liu@umkc.edu>’

The Description field contains
  found in Bowen Liu, Malwane M.A. Ananda (2023) <arXiv:2309.16443>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘P. Lafaye de Micheaux <lafaye@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("P.", "Lafaye"),
                    family = "de Micheaux",
                    role = c("aut", "cre"),
                    email = "lafaye@unsw.edu.au")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Michel Semenou <michel.semenou@oniris-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michel",
                    family = "Semenou",
                    role = c("aut", "cre"),
                    email = "michel.semenou@oniris-nantes.fr")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
ResSimulLvrRatio 4.714      0   9.196
Maintainer: ‘AC Del Re <acdelre@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("AC", "Del"),
                    family = "Re",
                    role = c("aut", "cre"),
                    email = "acdelre@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zoltan Botta-Dukat <botta-dukat.zoltan@okologia.mta.hu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zoltan",
                    family = "Botta-Dukat",
                    role = c("aut", "cre"),
                    email = "botta-dukat.zoltan@okologia.mta.hu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
comm.simul    5.249  0.027   5.978
comm.sampling 4.287  0.126   5.400
Maintainer: ‘Zhicheng Du <dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Ziqiang",
                      family = "Lin",
                      role = "aut"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Maintainer: ‘Mark Baas <mark.baas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mark",
                    family = "Baas",
                    role = c("aut", "cre"),
                    email = "mark.baas@gmail.com")
as necessary.
Maintainer: ‘W. E. Wansouwé <ericwansouwe@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("W.", "E."),
                      family = "Wansouwé",
                      role = c("aut", "cre"),
                      email = "ericwansouwe@gmail.com"),
               person(given = c("F.", "G."),
                      family = "Libengué",
                      role = "aut"),
               person(given = c("C.", "C."),
                      family = "Kokonendji",
                      role = "aut"))
as necessary.

The URL field contains the following bad parts:
  www.r-project.org
The URL field should be a list of URLs separated by commas or
whitespace.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
auto_match_seqs 5.89  0.286    5.42
Maintainer: ‘Tran Khanh Hiep <hieptkse03059@fpt.edu.vn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Tran", "Khanh"),
                      family = "Hiep",
                      role = c("aut", "cre"),
                      email = "hieptkse03059@fpt.edu.vn"),
               person(given = c("Nguyen", "Minh"),
                      family = "Duc",
                      role = "aut"))
as necessary.

File 'R/conclust-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Specified C++11: please drop specification unless essential
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘fitmodel.R’
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
CT_Hypothesis_Test 5.793  0.004   6.289
CT_Critical_Values 4.790  0.054   5.504
Maintainer: ‘Adrienne Traxler <adrienne.traxler@wright.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) concstats_hhi.Rd:13: Lost braces; missing escapes or markup?
    13 | value is required. Ranges from {0, 1} and often used for comparison over
       |                                ^
Maintainer: ‘Shannon T. Holloway <shannon.t.holloway@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Amanda",
                      family = "Brucker",
                      role = "aut"),
               person(given = c("Shannon", "T."),
                      family = "Holloway",
                      role = c("aut", "cre"),
                      email = "shannon.t.holloway@gmail.com"),
               person(given = "Jung-Ying",
                      family = "Tzeng",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
CKT.fit.GLM 4.259      0   5.866
Maintainer: ‘David Clement <dyc24@cornell.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Clement",
                    role = c("aut", "cre"),
                    email = "dyc24@cornell.edu")
as necessary.
Maintainer: ‘Christina Heinze-Deml <heinzedeml@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christina",
                      family = "Heinze-Deml",
                      role = c("aut", "cre"),
                      email = "heinzedeml@stat.math.ethz.ch"),
               person(given = "Jonas",
                      family = "Peters",
                      role = "aut",
                      email = "jonas.peters@math.ku.dk"),
               person(given = c("Asbjoern", "Marco", "Sinius"),
                      family = "Munk",
                      role = "aut",
                      email = "fgp998@alumni.ku.dk"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  <arXiv:1202.3775>), Residual Prediction test (based on Shah and
  Buehlmann, <arXiv:1511.03334>), Invariant environment prediction,
  <arXiv:1706.08576>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) KCI.Rd:44: Lost braces
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                ^
checkRd: (-1) KCI.Rd:44: Lost braces
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                      ^
checkRd: (-1) KCI.Rd:44: Lost braces; missing escapes or markup?
    44 |  \item \code{testStatistic} the statistic Tr(K_{(ddot{(Y)}|X)} * K_{(E|X)})
       |                                                                    ^
Maintainer: ‘Scott Chamberlain <myrmecocystus@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CODE_OF_CONDUCT.md
    From: README.md
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  pcmvt.Rd: pmvt, GenzBretz
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
SMCEM_msteps 4.876  0.000   7.628
EM_Umsteps   2.782  0.054   5.751
Maintainer: ‘Alessandra R. Brazzale <alessandra.brazzale@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("S", "original", "by", "Alessandra", "R.", "Brazzale.", "R", "port", "by", "Alessandra", "R.", "Brazzale"),
                      family = "<alessandra.brazzale@unipd.it>",
                      role = "aut",
                      email = "alessandra.brazzale@unipd.it"),
               person(given = c("following", "earlier", "work", "by", "Douglas"),
                      family = "Bates.",
                      role = "aut"),
               person(given = c("Alessandra", "R."),
                      family = "Brazzale",
                      role = "cre",
                      email = "alessandra.brazzale@unipd.it"))
as necessary.

Problems when reading CITATION file:
  It is recommended to use ‘given’ instead of ‘first’.
  It is recommended to use ‘given’ instead of ‘middle’.
  It is recommended to use ‘family’ instead of ‘last’.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) babies.Rd:35: Escaped LaTeX specials: \&
Maintainer: ‘Marta Sestelo <sestelo@uvigo.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Luis",
                      family = "Meira-Machado",
                      role = "aut"),
               person(given = "Marta",
                      family = "Sestelo",
                      role = c("aut", "cre"),
                      email = "sestelo@uvigo.es"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
'library' or 'require' call not declared from: ‘e1071’
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
checkRd: (-1) mya.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mya.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mya.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mya.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) mya.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
fungible     4.626  0.065   5.640
fungible.cpa 4.482  0.000   5.089
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
confintROB 4.497  0.394   6.839
Running ‘confintrob_test.R’ [14s/18s]
  Comparing ‘confintrob_test.Rout’ to ‘confintrob_test.Rout.save’ ...64c64
<       AIC       BIC    logLik -2*log(L)  df.resid 
---
>      AIC      BIC   logLik deviance df.resid 
203c203
<       AIC       BIC    logLik -2*log(L)  df.resid 
---
>      AIC      BIC   logLik deviance df.resid 
  Running ‘parallelTest.R’ [6s/13s]
  Running ‘varComprob_createParamSampleFunction.R’ [14s/18s]
  Comparing ‘varComprob_createParamSampleFunction.Rout’ to ‘varComprob_createParamSampleFunction.Rout.save’ ... OK
Maintainer: ‘Mathias Fuchs<mathias@mathiasfuchs.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mathias",
                    family = "Fuchs",
                    role = c("aut", "cre"),
                    email = "mathias@mathiasfuchs.de")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘confIntVariance-package.Rd’:
    \keyword{variance, confidence interval}
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  loo_conformal.Rd: predictive_interval
  predictive_interval.conformal.Rd: posterior_predict
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
loo_conformal 10.224   0.44  13.575
Maintainer: ‘Niharika Gauraha <niharika.gauraha@farmbio.uu.se>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niharika",
                      family = "Gauraha",
                      role = c("aut", "cre"),
                      email = "niharika.gauraha@farmbio.uu.se"),
               person(given = "Ola",
                      family = "Spjuth",
                      role = "aut"))
as necessary.
Maintainer: ‘Paolo Vergottini <paolo.vergottini@gmail.com>’

The Description field contains
  Fontana, and Vantini (2021) <arXiv:2102.06746>, Diquigiovanni, Fontana,
  and Vantini (2021) <arXiv:2106.01792>, Solari, and Djordjilovic (2021)
  <arXiv:2103.00627>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
conformal.fun.jackplus 2.538  0.182   5.712
Maintainer: ‘Paolo Vergottini <paolo.vergottini@gmail.com>’

The Description field contains
  <arXiv:1604.04173>, Diquigiovanni, Fontana, and Vantini (2021)
  <arXiv:2102.06746>, Diquigiovanni, Fontana, and Vantini (2021)
  <arXiv:2106.01792>, Solari, and Djordjilovic (2021) <arXiv:2103.00627>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  conformal.multidim.full.Rd: future.apply
  conformal.multidim.msplit.Rd: future.apply
  glmnet.funs.Rd: glmnet
  plot_multidim.Rd: ggplot2, gridExtra, hrbrthemes
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
conformal.multidim.jackplus 8.540  0.425  23.581
conformal.multidim.full     2.935  0.163   5.012
Maintainer: ‘Yachong Yang <yachong@wharton.upenn.edu>’

The Description field contains
  <arxiv:2104.13871>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  km.outcomes.Rd: survfit
  km.pmf.Rd: survfit
  km.support.Rd: survfit
  km.surv.Rd: survfit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
binomTestMSE 4.51  0.052   5.004
Maintainer: ‘Joerg-Henrik Heine <jhheine@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Joerg-Henrik",
                      family = "Heine",
                      role = c("aut", "cre"),
                      email = "jhheine@googlemail.com"),
               person(given = c("R.W.", "Alexandrowicz"),
                      family = ")",
                      role = "aut"),
               person(given = c("some", "package", "testing", "by", "Mark"),
                      family = "Stemmler",
                      role = "aut"))
as necessary.
Maintainer: ‘Jesse Hemerik <j.b.a.hemerik@lumc.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jesse",
                      family = "Hemerik",
                      role = c("aut", "cre"),
                      email = "j.b.a.hemerik@lumc.nl"),
               person(given = "Jelle",
                      family = "Goeman",
                      role = "aut"))
as necessary.
checkRd: (-1) binary_class_cm.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) binary_class_cm.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) multi_class_cm.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘I.M.L. Nadeesha Jayaweera <njayaweera@wpi.edu>’

The Description field contains
  <[https:doi.org/10.2307/1390838]https:doi.org/10.2307/1390838>.
Please write DOIs as <doi:prefix/suffix>.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
get_var_info 1.125  0.105    6.53
Maintainer: ‘James Conigrave <james.conigrave@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "James",
                    family = "Conigrave",
                    role = c("aut", "cre"),
                    email = "james.conigrave@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
autoModel 7.749   0.49  10.521
Maintainer: ‘José Manuel Monroy Kuhn <nolozz@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) NetStats.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) NetStats.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) generate_network.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
getVertexsPerEdgeFeature 4.013  0.013   5.091
Maintainer: ‘Tomasz Bartlomowicz <tomasz.bartlomowicz@ue.wroc.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Andrzej",
                      family = "Bak",
                      role = "aut"),
               person(given = "Tomasz",
                      family = "Bartlomowicz",
                      role = c("aut", "cre"),
                      email = "andrzej.bak@ue.wroc.pl"),
               person(role = "aut",
                      email = "tomasz.bartlomowicz@ue.wroc.pl"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The URL field contains the following bad parts:
  www.r-project.org
The URL field should be a list of URLs separated by commas or
whitespace.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
ShowAllSimulations 4.315  0.176   5.611
Found the following files/directories:
  ‘design_names.csv’ ‘design_numbers.csv’
  ‘encoded_orthogonal_factorial_design.csv’
  ‘orthogonal_factorial_design.csv’
Maintainer: ‘Sidharth Macherla <msidharthrasik@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DBI.Rd: DBIConnection-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
qgraph.conNEcT 6.692  0.014   7.988
Maintainer: ‘David M. Kaplan <dmkaplan2000@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "M."),
                      family = "Kaplan",
                      role = c("cre", "aut"),
                      email = "dmkaplan2000@gmail.com"),
               person(given = "Marco",
                      family = "Andrello",
                      role = "ctb",
                      email = "marco.andrello@gmail.com"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘chile.loco.Rd’:
    http://dx.doi.org/10.1016/j.pocean.2014.03.011
  File ‘damselfish.lods.Rd’:
    http://dx.doi.org/10.1046/j.1471-8286.2003.00439.x
Examples with CPU (user + system) or elapsed time > 5s
                               user system elapsed
d.rel.conn.multiple           7.588  0.034   9.856
d.rel.conn.multinomial.unnorm 5.303  0.087   7.263
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘conogive.Rd’:
    https://doi.org/10.1007/978-1-4757-2691-6_15
Maintainer: ‘Alexis Dinno <alexis.dinno@pdx.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexis",
                    family = "Dinno",
                    role = c("aut", "cre"),
                    email = "alexis.dinno@pdx.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
cc_cluster_count            6.998  0.054   9.652
consensus_matrix_data_prtrb 6.734  0.035   9.118
consensus_matrix            6.534  0.060   8.176
consensus_matrix_multiview  5.444  0.012   7.228
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘api-get_datalog.R’ ‘api-get_device.R’ ‘api-get_devices.R’
    ‘api-get_element.R’ ‘api-get_elements.R’ ‘api-get_project.R’
    ‘api-get_projects.R’ ‘api-get_users_me.R’ ‘client.R’
Maintainer: ‘Mary C Meyer <meyer@stat.colostate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mary", "C"),
                    family = "Meyer",
                    role = c("aut", "cre"),
                    email = "meyer@stat.colostate.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
combinpmatr 4.780  0.002   5.776
order2rank  3.693  0.070   5.383
Maintainer: ‘Josep Puig <puigjos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "Puig"),
                      family = "Sallés",
                      role = "aut"),
               person(given = "Josep",
                      family = "Puig",
                      role = "cre",
                      email = "puigjos@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
incidents 5.538   0.33   2.403
Examples with CPU time > 2.5 times elapsed time
             user system elapsed ratio
constellate 1.024  0.032   0.383 2.757
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
meuse.blocks 5.296  0.022   6.685
Maintainer: ‘Angelo Mazza <a.mazza@unict.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Antonio",
                      family = "Punzo",
                      role = "aut"),
               person(given = "Angelo",
                      family = "Mazza",
                      role = c("aut", "cre"),
                      email = "a.mazza@unict.it"),
               person(given = c("Paul", "D."),
                      family = "McNicholas",
                      role = "aut"))
as necessary.
Maintainer: ‘Pedro L. Rodriguez <pedro.rodriguezsosa@gmail.com>’

The Description field contains
  approach developed by Khodak et al. (2018) <arXiv:1805.05388> and
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
get_nns     8.350  0.008  10.118
get_ncs     7.173  0.008   8.298
get_cos_sim 4.704  0.024   5.453
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Robin", "K.", "S."),
                    family = "Hankin",
                    role = c("aut", "cre"),
                    email = "hankin.robin@gmail.com")
as necessary.
Maintainer: ‘Carl Witthoft <cellocgw@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carl",
                    family = "Witthoft",
                    role = c("aut", "cre"),
                    email = "cellocgw@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                           user system elapsed
Exact_multinomial_test_1xc                5.579  0.004   6.864
MidP_multinomial_test_1xc                 5.227  0.000   6.141
CochranArmitage_exact_cond_midP_tests_rx2 4.486  0.006   5.270
Maintainer: ‘Nicholas Hamilton <n.hamilton@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nicholas",
                    family = "Hamilton",
                    role = c("aut", "cre"),
                    email = "n.hamilton@unsw.edu.au")
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) getConvexHull.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getConvexHull.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) getConvexHull.Rd:30: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Tony Murphy <tonymurphy55.am@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tony",
                    family = "Murphy",
                    role = c("aut", "cre"),
                    email = "tonymurphy55.am@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cumulative_split_code.Rd’ ‘decompose_contrasts.Rd’
    ‘expand_formulas.R’ ‘factor_coercion_messages.R’
    ‘glimpse_contrasts.R’ ‘make_parameters.R’ ‘orth_polynomial_code.Rd’
    ‘raw_polynomial_code.Rd’ ‘use_contrast.R’ ‘utils_check_labels.R’
    ‘utils_trymatch.R’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
contrast 5.165   0.38   7.176
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

The Description field contains
  when the model is known ('Guo and Small' (2016) <arXiv:1602.01051>) and
  <arXiv:2010.09922>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Ben C. Ubah <ubah.ben22@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Ben", "C."),
                    family = "Ubah",
                    role = c("aut", "cre"),
                    email = "ubah.ben22@gmail.com")
as necessary.
Maintainer: ‘Eric S. Kawaguchi <erickawaguchi@ucla.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Eric", "S."),
                    family = "Kawaguchi",
                    role = c("aut", "cre"),
                    email = "erickawaguchi@ucla.edu")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  curve_cont.Rd: riskRegression
  plot_surv_3Dsurface.Rd: riskRegression
  plot_surv_animated.Rd: riskRegression, facet_wrap
  plot_surv_area.Rd: riskRegression, facet_wrap
  plot_surv_at_t.Rd: riskRegression, facet_wrap
  plot_surv_contour.Rd: riskRegression, ggplot2, facet_wrap
  plot_surv_heatmap.Rd: riskRegression, facet_wrap
  plot_surv_lines.Rd: riskRegression, facet_wrap
  plot_surv_matrix.Rd: riskRegression, facet_wrap
  plot_surv_quantiles.Rd: riskRegression, facet_wrap
  plot_surv_rmst.Rd: riskRegression, facet_wrap
  plot_surv_rmtl.Rd: riskRegression, facet_wrap
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot_surv_area   5.650  0.073   6.460
plot_surv_matrix 4.905  0.078   6.006
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot.convergence.clubs 4.451  0.031   5.804
Maintainer: ‘Pierre Lafaye De Micheaux <lafaye@unsw.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
conv.ann 5.850  0.095   7.573
conv.rt  5.232  0.162   6.317
Maintainer: ‘Gordon Shotwell <g.e.shotwell@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: CONDUCT.md
    From: README.md
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
convSig 4.361  0.083    5.79
Maintainer: ‘Daniel M. Griffith <griffith.dan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Daniel", "M."),
                      family = "Griffith",
                      role = c("aut", "cre"),
                      email = "griffith.dan@gmail.com"),
               person(given = c("Joseph", "A."),
                      family = "Veech",
                      role = "aut"),
               person(given = c("Charles", "J."),
                      family = "Marsh",
                      role = "aut"))
as necessary.

File 'R/cooccur-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
checkRd: (-1) CovrgPlot.Rd:28: Lost braces; missing escapes or markup?
    28 | \item{plotCI}{a vector of up to 4 numbers out of the set {1,2,3,4}, corresponding to which
       |                                                          ^
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
CovrgPlot 4.653  0.055   5.825
Covrg     3.922  0.044   5.068
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
sphericalharmonics 4.741  0.002   6.622
Maintainer: ‘Jochen Staudacher <jochen.staudacher@hs-kempten.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Drew Schmidt <wrathematics@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
FRcop 5.221      0   6.766
Maintainer: ‘John Hughes <drjphughesjr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Emily",
                      family = "Goren",
                      role = "aut",
                      email = "emily.goren@gmail.com"),
               person(given = "John",
                      family = "Hughes",
                      role = c("aut", "cre"),
                      email = "drjphughesjr@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) copCAR.Rd:40: Lost braces
    40 |        item{\code{maxit}}{the maximum number of iterations to be used by \code{\link{optim}} when optimizing the objective function. Defaults to \code{1000}.}
       |            ^
checkRd: (-1) copCAR.Rd:40: Lost braces
    40 |        item{\code{maxit}}{the maximum number of iterations to be used by \code{\link{optim}} when optimizing the objective function. Defaults to \code{1000}.}
       |                          ^
Maintainer: ‘Fuyuan David Li <LFY@gwmail.gwu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Fuyuan", "David"),
                    family = "Li",
                    role = c("aut", "cre"),
                    email = "lfy@gwmail.gwu.edu")
as necessary.
checkRd: (-1) condQestCopC.Rd:45: Lost braces; missing escapes or markup?
    45 | obtain the conditional qth quantile of Y_{n+1} given {Y1,...,Yn}.
       |                                          ^
checkRd: (-1) condQestCopC.Rd:45: Lost braces; missing escapes or markup?
    45 | obtain the conditional qth quantile of Y_{n+1} given {Y1,...,Yn}.
       |                                                      ^
checkRd: (-1) condQestCopC.Rd:40: Lost braces; missing escapes or markup?
    40 | \code{condQestCopC} returns the conditional tao-th quantile of Y_{n+1} given {Y1,...,Yn}
       |                                                                  ^
checkRd: (-1) condQestCopC.Rd:40: Lost braces; missing escapes or markup?
    40 | \code{condQestCopC} returns the conditional tao-th quantile of Y_{n+1} given {Y1,...,Yn}
       |                                                                              ^
Maintainer: ‘MA Jian <majian03@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘construct_empirical_copula.Rd’:
    \keyword{empirical copula; rank}
  File ‘entknn.Rd’:
    \keyword{entropy; kNN}
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
tst  5.045  0.081   5.772
mcpd 0.021  0.003   6.668
checkRd: (-1) ComputeCope.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:54-56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ComputeCope.Rd:57-61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DrawContour.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Draws the contour {f=c}.}
       |                          ^
checkRd: (-1) DrawContour.Rd:20: Lost braces; missing escapes or markup?
    20 | Draws the contour {f=c}.
       |                   ^
checkRd: (-1) cope.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) cope.Rd:35: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
cope 13.21  0.133  17.072
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cophe.prepare.dat.susie.Rd: runsusie
  cophe.susie.Rd: check_dataset, runsusie
  cophe.susie.lbf.Rd: runsusie
  cophe_heatmap.Rd: pheatmap
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Jiajing Zheng <carolinez6850@gmail.com>’

The Description field contains
  Inference with Unobserved Confounding <arXiv:2102.09412>, with Gaussian
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bcalibrate.Rd: kEstimate, pca
  cal_rv.Rd: kEstimate, pca
  gcalibrate.Rd: kEstimate, pca
  plot_estimates.Rd: theme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Simon Boge Brant <simbrant91@gmail.com>’

The Description field contains
  via gradient boosting [Brant, Hobæk Haff (2022); <arXiv:2208.04669>].
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Bouchra R. Nasri <bouchra.nasri@umontreal.ca>’

The Description field contains
  <arXiv:2301.13408>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Takeshi Emura <takeshiemura@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Takeshi",
                      family = "Emura",
                      role = c("aut", "cre"),
                      email = "takeshiemura@gmail.com"),
               person(given = "Xinwei",
                      family = "Huang",
                      role = "aut"),
               person(given = "Ting-Hsuan",
                      family = "Long",
                      role = "aut"),
               person(given = "Li-Hsien",
                      family = "Sun",
                      role = "aut"))
as necessary.
Maintainer: ‘Xin-Wei Huang <xinweihuang@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xin-Wei",
                      family = "Huang",
                      role = c("aut", "cre"),
                      email = "xinweihuang@hotmail.com"),
               person(given = "Takeshi",
                      family = "Emura",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
xvCopula 3.494  0.006   5.159
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
copula.sim 3.687  0.071   5.444
Maintainer: ‘Lei Yang <leiyangslu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lei",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "leiyangslu@gmail.com")
as necessary.
Maintainer: ‘Shuang Song <song-s19@mails.tsinghua.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wei",
                      family = "Jiang",
                      role = "aut"),
               person(given = "Shuang",
                      family = "Song",
                      role = c("aut", "cre"),
                      email = "song-s19@mails.tsinghua.edu.cn"),
               person(given = "Lin",
                      family = "Hou",
                      role = "aut"),
               person(given = "Hongyu",
                      family = "Zhao",
                      role = "aut"))
as necessary.
Maintainer: ‘Andrei Boutyline <aboutyl@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrei",
                    family = "Boutyline",
                    role = c("aut", "cre"),
                    email = "aboutyl@umich.edu")
as necessary.
Maintainer: ‘Xi (Rossi) LUO <xi.rossi.luo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xi",
                      family = "LUO",
                      role = "aut",
                      comment = "Rossi"),
               person(given = "Florentina",
                      family = "Bunea",
                      role = "aut"),
               person(given = "Christophe",
                      family = "Giraud",
                      role = "aut"),
               person(given = "Xi",
                      family = "LUO",
                      role = "cre",
                      email = "xi.rossi.luo@gmail.com",
                      comment = "Rossi"))
as necessary.

The Description field contains
  distributions.  Read http://arxiv.org/abs/1508.01939 for more details.
Please enclose URLs in angle brackets (<...>).
The Description field contains
  distributions.  Read http://arxiv.org/abs/1508.01939 for more details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CoreCollection.Rd: R6Class
  dot-CoreCollectionClass.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) getSurface.Rd:22: Lost braces
    22 | value \code{getSurface} shortens the output of \code{conv} to remove artificial surface layers. The output is thus a subset of the input, and identical in structure to the /code{conv} output.
       |                                                                                                                                                                                  ^
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
getRoots 4.93   0.47   6.149
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
group_bar_plots 6.555  0.183   7.838
Maintainer: ‘Taylor Arnold <tarnold2@richmond.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Taylor",
                      family = "Arnold",
                      role = c("aut", "cre"),
                      email = "tarnold2@richmond.edu"),
               person(given = "Lauren",
                      family = "Tilton",
                      role = "aut"))
as necessary.
Maintainer: ‘Guoli Sun <guolisun87@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alex",
                      family = "Krasnitz",
                      role = "aut"),
               person(given = "Guoli",
                      family = "Sun",
                      role = c("aut", "cre"),
                      email = "guolisun87@gmail.com"))
as necessary.
Maintainer: ‘Santhosh Sasanapuri <santhosh458@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Navin",
                      family = "Loganathan",
                      role = "aut"),
               person(given = "Mohan",
                      family = "Manivannan",
                      role = "aut"),
               person(given = "Santhosh",
                      family = "Sasanapuri",
                      role = c("aut", "cre"),
                      email = "santhosh458@gmail.com"),
               person(given = "LatentView",
                      family = "Analytics",
                      role = "ctb"))
as necessary.
Maintainer: ‘John Ferguson <john.ferguson@nuigalway.ie>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘linkd.Rd’:
    \keyword{Feligi/Sunter,}
    \keyword{algorithm,}
    \keyword{class,}
    \keyword{linkage,}
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
coef.cornet 4.832  0.191   6.612
Maintainer: ‘Niklas Pfister <np@math.ku.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niklas",
                      family = "Pfister",
                      role = c("aut", "cre"),
                      email = "np@math.ku.dk"),
               person(given = "Sebastian",
                      family = "Weichwald",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘refresh_coronvirus.R’
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Juliane",
                      family = "Schafer",
                      role = "aut"),
               person(given = "Rainer",
                      family = "Opgen-Rhein",
                      role = "aut"),
               person(given = "Verena",
                      family = "Zuber",
                      role = "aut"),
               person(given = "Miika",
                      family = "Ahdesmaki",
                      role = "aut"),
               person(given = c("A.", "Pedro", "Duarte"),
                      family = "Silva",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plotRRgradVE 5.250  0.026   6.631
computePower 4.746  0.077   5.908
plotPowerTri 4.495  0.000   5.415
Maintainer: ‘Kasper Welbers <kasperwelbers@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kasper",
                      family = "Welbers",
                      role = c("aut", "cre"),
                      email = "kasperwelbers@gmail.com"),
               person(given = "Wouter",
                      family = "van Atteveldt",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  tCorpus-cash-annotate_rsyntax.Rd: tquery
  tCorpus-cash-subset.Rd: subset.data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Rohan Reddy Tummala <rohantummala@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Rohan", "Reddy"),
                    family = "Tummala",
                    role = c("aut", "cre"),
                    email = "rohantummala@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  corrarray.Rd: rcorr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
mc.test.chisq 5.048  0.031   6.471
Specified C++11: please drop specification unless essential
Maintainer: ‘Prabina Kumar Meher <meherprabin@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Prabina", "Kumar", "Meher", "&", "A.", "R."),
                      family = "Rao",
                      role = "aut"),
               person(given = c("Prabina", "Kumar"),
                      family = "Meher",
                      role = "cre",
                      email = "meherprabin@yahoo.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
assoc_Zi.ZjY 5.258  0.000   6.215
assoc_Zi.ZjR 5.227  0.001   6.295
Maintainer: ‘Weiliang Qiu <stwxq@channing.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bernard",
                      family = "Rosner",
                      role = "aut"),
               person(given = "Shelley",
                      family = "Tworoger",
                      role = "aut"),
               person(given = "Weiliang",
                      family = "Qiu",
                      role = c("aut", "cre"),
                      email = "stwxq@channing.harvard.edu"))
as necessary.
Maintainer: ‘Abbas Rahal <Abbas.Rahal13@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Abbas",
                      family = "Rahal",
                      role = c("aut", "cre"),
                      email = "abbas.rahal13@gmail.com"),
               person(given = "Anna",
                      family = "Akpawu",
                      role = "aut"),
               person(given = "Justin",
                      family = "Chitpin",
                      role = "aut"),
               person(given = c("David", "R."),
                      family = "Bickel",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
binarize                5.323  0.134   6.359
plot_correlation_funnel 5.379  0.059   6.720
correlate               4.410  0.106   5.279
Maintainer: ‘Gary Witt <gary.witt@temple.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chris",
                      family = "Rohlfs",
                      role = "aut"),
               person(given = "Gary",
                      family = "Witt",
                      role = c("aut", "cre"),
                      email = "gary.witt@temple.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ggbplot.Rd: bplot
  tally.Rd: bplot, calibrate
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  corrgrapher.Rd: visNetwork
  plot.corrgrapher.Rd: visNetwork
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  polycorr.Rd: polychor
  tetracorr.Rd: polychor
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Wim Van der Elst <Wim.vanderelst@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wim",
                      family = "Van der Elst",
                      role = c("aut", "cre"),
                      email = "wim.vanderelst@gmail.com"),
               person(given = "Geert",
                      family = "Molenberghs",
                      role = "aut"),
               person(given = "Dieter",
                      family = "Hilgers",
                      role = "aut"),
               person(given = c("&", "Nicole"),
                      family = "Heussen",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘corrRect.hclust.Rd’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
corrplot 1.833  0.023   6.178
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  rplot.Rd: geom_point
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Michael G. Campana <campanam@si.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "G."),
                    family = "Campana",
                    role = c("aut", "cre"),
                    email = "campanam@si.edu")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.

The BugReports field in DESCRIPTION has
  https://github.com/campanam/rCorrSieve
which should likely be
  https://github.com/campanam/rCorrSieve/issues
instead.
Maintainer: ‘Ran Gao <rgao8@uic.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rawan",
                      family = "Allozi",
                      role = "aut"),
               person(given = "Hakan",
                      family = "Demirtas",
                      role = "aut"),
               person(given = "Ran",
                      family = "Gao",
                      role = c("aut", "cre"),
                      email = "rgao8@uic.edu"))
as necessary.
Maintainer: ‘Alan Inglis <alan.n.inglis@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alan",
                    family = "Inglis",
                    role = c("aut", "cre"),
                    email = "alan.n.inglis@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘corrBarplot.R’ ‘corrNetwork.R’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
corrPairs 5.601  0.253   5.871
Maintainer: ‘Fran Urbano <viraltux@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Fran",
                    family = "Urbano",
                    role = c("aut", "cre"),
                    email = "viraltux@gmail.com")
as necessary.
Maintainer: ‘Danyang Yu <dyu33@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Danyang",
                      family = "Yu",
                      role = c("aut", "cre"),
                      email = "dyu33@jhu.edu"),
               person(given = "Weiliang",
                      family = "Qiu",
                      role = "aut"),
               person(given = "Zeyu",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Kimberly",
                      family = "Glass",
                      role = "aut"),
               person(given = "Jessica",
                      family = "Su",
                      role = "aut"),
               person(given = c("Dawn", "L."),
                      family = "DeMeo",
                      role = "aut"),
               person(given = "Kelan",
                      family = "Tantisira",
                      role = "aut"),
               person(given = c("Scott", "T."),
                      family = "Weiss",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
corTESTsrd 4.954  0.016   6.054
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
corto 1.841  0.103   7.552
Maintainer: ‘Augustin Mutak <mutak94@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Augustin",
                    family = "Mutak",
                    role = c("aut", "cre"),
                    email = "mutak94@gmail.com")
as necessary.
Maintainer: ‘Michael Sachs <sachsmc@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Sachs",
                    role = c("aut", "cre"),
                    email = "sachsmc@gmail.com")
as necessary.
Maintainer: ‘Andrew Harris <harris@astro.umd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Harris",
                    role = c("aut", "cre"),
                    email = "harris@astro.umd.edu")
as necessary.
checkRd: (-1) cosmoFns-package.Rd:34: Escaped LaTeX specials: \&
Maintainer: ‘Yanlin Tang <yanlintang2018@163.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yanlin",
                      family = "Tang",
                      role = c("aut", "cre"),
                      email = "yanlintang2018@163.com"),
               person(given = c("Huixia", "Judy"),
                      family = "Wang",
                      role = "aut"))
as necessary.
Maintainer: ‘David Cortes <david.cortes.rivera@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "David",
                    family = "Cortes",
                    role = c("aut", "cre"),
                    email = "david.cortes.rivera@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ctmaAllInvFit.Rd: ctStanFit
  ctmaFit.Rd: ctStanFit, ctsem
  ctmaInit.Rd: ctStanFit, ctsem
  ctmaOptimizeFit.Rd: ctStanFit
  ctmaOptimizeInit.Rd: ctStanFit
  ctmaPlotCtsemMod.Rd: ctsem
  ctmaScaleInits.Rd: ctStanFit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘A. Christian Silva <a.christian.silva@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("A.", "Christian"),
                    family = "Silva",
                    role = c("aut", "cre"),
                    email = "a.christian.silva@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
sphericalRange  5.7  0.026   6.674
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
zibellt 5.366  0.012   6.586
Maintainer: ‘Ivan Fernandez-Val <ivanf@bu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mingli",
                      family = "Chen",
                      role = "aut"),
               person(given = "Victor",
                      family = "Chernozhukov",
                      role = "aut"),
               person(given = "Ivan",
                      family = "Fernandez-Val",
                      role = c("aut", "cre"),
                      email = "ivanf@bu.edu"),
               person(given = "Blaise",
                      family = "Melly",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
RandomSearchClassif 10.166  0.456  13.056
RandomSearchRegr    10.136  0.213  12.475
Maintainer: ‘Jaroslaw Chilimoniuk <jaroslaw.chilimoniuk@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) summary_fitlist.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary_fitlist.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary_fitlist.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary_fitlist.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary_fitlist.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Kellie Archer <archer.43@osu.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
countgmifs 4.642  0.116   5.932
Maintainer: ‘Timo Adam <timo.adam@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Timo",
                    family = "Adam",
                    role = c("aut", "cre"),
                    email = "timo.adam@uni-bielefeld.de")
as necessary.

The Description field contains
  Hidden Markov Models for Time Series of Counts. <arXiv:1901.03275>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘psRes.Rd’:
    https://doi.org/10.1201/b20790
  File ‘stateDec.Rd’:
    https://doi.org/10.1201/b20790
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
stateDec 6.707  0.008   8.549
psRes    6.409  0.015   7.723
plotMod  6.263  0.000   7.445
plotRes  6.242  0.016   7.806
plotObs  6.181  0.075   7.391
fitMod   6.186  0.024   7.148
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
Cluster 4.48   0.31   6.405
Maintainer: ‘Andrew Robinson <apro@unimelb.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Joseph", "M"),
                      family = "Hilbe",
                      role = "aut",
                      email = "hilbe@asu.edu"),
               person(given = "Andrew",
                      family = "Robinson",
                      role = "cre",
                      email = "apro@unimelb.edu.au"))
as necessary.
checkRd: (-1) fasttrakg.Rd:18: Lost braces
    18 |     \item{\code{killip}}{Killip level of cardiac event severity (1-4)age75}{1= Age>75; 0=Age<=75}
       |                                                                            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ml.nb1.Rd: glm.nb
  ml.nb2.Rd: glm.nb
  ml.nbc.Rd: glm.nb
  ml.pois.Rd: glm.nb
  modelfit.Rd: glm.nb
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Author field differs from that derived from Authors@R
  Author:    ‘Francesco Saverio Bellelli [aut, cre, cph] (https://fbellelli.com/)’
  Authors@R: ‘Francesco Saverio Bellelli [aut, cre, cph] (Website: https://fbellelli.com/)’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
quick_map 4.257  0.284   6.502
Maintainer: ‘David M. Smith <dmccsmith@verizon.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "M"),
                      family = "Smith",
                      role = "aut"),
               person(given = c("Malcolm", "J"),
                      family = "Faddy",
                      role = "aut"),
               person(given = c("David", "M."),
                      family = "Smith",
                      role = "cre",
                      email = "dmccsmith@verizon.net"))
as necessary.
Maintainer: ‘Anna Neufeld <aneufeld@fredhutch.org>’

The Description field contains
  <arXiv:2307.12985>. Intended for turning a matrix of single-cell RNA
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Brian King <brianking387@gmail.com>’

The Description field contains
  King and Kowal (2022) <arXiv:2110.14790>, and Kowal and Wu (2023)
  <arXiv:2110.12316>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Zeyu Zhang <zhzyvv@gmail.com>’

The Description field contains
  CP, Weiss ST, Qiu W. (2019) <doi.org/10.1038/s41598-019-41315-w>.
Please write DOIs as <doi:prefix/suffix>.
Maintainer: ‘Tanujit Chakraborty <tanujitisi@gmail.com>’

The Description field contains
  is based on the algorithms by Liu et al. (2023) <arXiv:2311.14359>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
output_summary 7.945  0.165  10.929
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
DABCD.sim 11.802  0.006  14.670
KER.sim   10.624  0.004  12.301
ECADE.sim 10.439  0.012  12.693
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
get_simpsons_paradox_c 6.923   0.17   7.565
Maintainer: ‘Sandra De Iaco <sandra.deiaco@unisalento.it>’

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.
Maintainer: ‘Deniz Akdemir <deniz.akdemir.work@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Deniz",
                      family = "Akdemir",
                      role = c("aut", "cre"),
                      email = "deniz.akdemir.work@gmail.com"),
               person(given = "Mohamed",
                      family = "Somo",
                      role = "aut"),
               person(given = c("Julio", "Isidro"),
                      family = "Sanchez",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  <https://www.biorxiv.org/content/10.1101/857425v1>.  It can be used to
Please use permanent DOI markup for linking to publications as in <doi:prefix/suffix>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
forest_plot 4.196   0.12    6.09
Maintainer: ‘Michael Kirchner <michael@kirchner.io>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Kirchner",
                    role = c("aut", "cre"),
                    email = "michael@kirchner.io")
as necessary.
Found the following files/directories:
  ‘covfefe_inauguration.txt’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
covglasso 6.312  0.018   7.276
Maintainer: ‘Marcelo Ponce <m.ponce@utoronto.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Marcelo",
                      family = "Ponce",
                      role = c("aut", "cre"),
                      email = "m.ponce@utoronto.ca"),
               person(given = "Amit",
                      family = "Sandhel",
                      role = "ctb"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
growth.rate 4.355  0.154   7.029
Maintainer: ‘Max Salvatore <mmsalva@umich.edu>’

Found the following (possibly) invalid file URI:
  URI: twitter.com/MaxSalTweets
    From: README.md
Maintainer: ‘Peter Hoff <peter.hoff@duke.edu>’

The Description field contains
  McCormack and Zhang (2022) <arXiv:2207.12484> "Core Shrinkage
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Naisyin",
                      family = "Wang",
                      role = "aut",
                      email = "nwangaa@umich.edu"),
               person(given = c("Adrian", "Raftery", "with", "contributions", "from", "Chris", "Fraley"),
                      family = "<fraley@uw.edu>",
                      role = "aut",
                      email = "fraley@uw.edu"),
               person(given = "Hana",
                      family = "Sevcikova",
                      role = "cre",
                      email = "hanas@uw.edu"))
as necessary.
File ‘covr/libs/covr.so’:
  Found non-API calls to R: ‘BODY’, ‘CLOENV’, ‘FORMALS’, ‘SET_BODY’,
    ‘SET_CLOENV’, ‘SET_FORMALS’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
cov.sel 5.453  0.019   7.098
Maintainer: ‘Shahin Tavakoli <s.tavakoli@warwick.ac.uk>’

The Description field contains
  <https://projecteuclid.org/euclid.aos/1498636862> <arXiv:1505.02023>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
rPLSIM 5.895  0.181   8.074
Maintainer: ‘Ben Barnard <ben_barnard@outlook.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘covTestR-package.Rd’:
    http://doi.org/10.1016/j.csda.2007.03.004
    http://doi.org/10.1016/j.jmva.2010.07.004
  File ‘homogeneityStatistics.Rd’:
    http://doi.org/10.1080/15598608.2017.1308895
    http://doi.org/10.3923/jas.2013.270.277
    http://doi.org/10.1016/j.jspi.2015.10.007
    http://doi.org/10.1016/S0378-3758(00)00209-3
    http://doi.org/10.1016/j.csda.2007.03.004
    http://doi.org/10.1016/j.jmva.2014.06.003
    http://doi.org/10.1016/j.jmva.2009.12.010
  File ‘structureStatistics.Rd’:
    http://doi.org/10.1080/00949655.2014.948441
    http://doi.org/10.1198/jasa.2010.tm09560
    http://doi.org/10.1016/j.jspi.2011.07.019
    http://doi.org/10.1214/aos/1031689018
    http://doi.org/10.14490/jjss.35.251
    http://doi.org/10.1016/j.jmva.2011.03.003
Specified C++11: please drop specification unless essential
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
test_srcrefs_df              7.151  0.494   9.596
test_srcrefs                 6.955  0.585  10.313
test_trace_mapping           6.859  0.618  12.256
trace_srcrefs_df             6.921  0.506  10.560
as.data.frame.list_of_srcref 4.834  0.369   7.082
pkg_srcrefs_df               4.735  0.331   6.886
pkg_srcrefs                  4.699  0.313   6.527
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  axis_canvas.Rd: ggplot2, coord_flip
  background_grid.Rd: theme
  draw_line.Rd: geom_path
  draw_text.Rd: geom_label
  ggsave2.Rd: ggsave
  insert_xaxis_grob.Rd: ggplot2
  save_plot.Rd: ggsave
  theme_minimal_grid.Rd: theme_minimal
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
plot_grid 4.590  0.024   5.058
add_sub   3.019  0.242   5.179
Maintainer: ‘"Kropko, Jonathan" <jkropko@virginia.edu>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘baseline.build.Rd’:
    https://doi.org/10.1017/psrm.2018.19
  File ‘bca.Rd’:
    https://doi.org/10.1214/ss/1032280214
  File ‘coxed-package.Rd’:
    https://doi.org/10.1017/psrm.2018.19
    https://doi.org/10.1017/S000712341700045X
    https://doi.org/10.1137/0904045
    https://doi.org/10.1017/S0007123403000140
    https://doi.org/10.1002/sim.3092
    http://dx.doi.org/10.1080/01621459.2016.1180986
  File ‘coxed.Rd’:
    https://doi.org/10.1017/S000712341700045X
    https://doi.org/10.1214/ss/1032280214
  File ‘coxed.gam.Rd’:
    https://doi.org/10.1017/S000712341700045X
    http://dx.doi.org/10.1080/01621459.2016.1180986
  File ‘coxed.gam.tvc.Rd’:
    https://doi.org/10.1017/S000712341700045X
  File ‘coxed.npsf.Rd’:
    https://doi.org/10.1017/S000712341700045X
  File ‘coxed.npsf.tvc.Rd’:
    https://doi.org/10.1017/S000712341700045X
  File ‘generate.lm.Rd’:
    https://doi.org/10.1017/psrm.2018.19
  File ‘martinvanberg.Rd’:
    https://doi.org/10.1017/S0007123403000140
  File ‘sim.survdata.Rd’:
    https://doi.org/10.1017/psrm.2018.19
  File ‘survsim.plot.Rd’:
    https://doi.org/10.1017/psrm.2018.19
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  coxed.Rd: mgcv, rms
  coxed.gam.Rd: mgcv
  coxed.gam.tvc.Rd: mgcv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
getTestKM.list 5.775  0.001   7.264
getAutoKM.list 5.009  0.003   7.184
getTestKM      3.881  0.110   5.476
getAutoKM      3.886  0.091   5.172
cv.coxEN       3.882  0.063   5.066
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘coxphf-tidiers.R’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
coxphSGD 4.738  0.168   7.153
Maintainer: ‘Jing Peng <pengjing@live.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jing",
                    family = "Peng",
                    role = c("aut", "cre"),
                    email = "pengjing@live.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Hyeri You <h2you@health.ucsd.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Hyeri",
                      family = "You",
                      role = c("aut", "cre"),
                      email = "h2you@health.ucsd.edu"),
               person(given = "Ronghui",
                      family = "Xu",
                      role = "aut"))
as necessary.
checkRd: (-1) gen_data.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gen_data.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gen_data.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) plot.coxr.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) plot.coxr.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) plot.coxr.Rd:38-39: Lost braces in \itemize; \value handles \item{}{} directly
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  coxr.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Bella Vakulenko-Lagun <bella.vakulenko-lagun@mail.huji.ac.il>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bella",
                      family = "Vakulenko-Lagun",
                      role = c("aut", "cre"),
                      email = "bella.vakulenko-lagun@mail.huji.ac.il"),
               person(given = "Micha",
                      family = "Mandel",
                      role = "aut"),
               person(given = c("Rebecca", "A."),
                      family = "Betensky",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) coxph.RT.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) coxph.RT.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) coxph.RT.Rd:59-71: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Feng Chen <feng.chen@unsw.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Feng",
                    family = "Chen",
                    role = c("aut", "cre"),
                    email = "feng.chen@unsw.edu.au")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  coxsei-package.Rd: survival
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
coxseiInt    4.507  0.122   5.592
coxseifit.ex 3.771  0.091   5.103
Maintainer: ‘Quentin Giai Gianetto <quentin2g@yahoo.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Quentin", "Giai"),
                      family = "Gianetto",
                      role = c("aut", "cre"),
                      email = "quentin2g@yahoo.fr"),
               person(given = "Florence",
                      family = "Combes",
                      role = "aut"),
               person(given = "Claire",
                      family = "Ramus",
                      role = "aut"),
               person(given = "Christophe",
                      family = "Bruley",
                      role = "aut"),
               person(given = "Yohann",
                      family = "Couté",
                      role = "aut"),
               person(given = "Thomas",
                      family = "Burger",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
compute_p_values 3.099  0.209    5.57
Maintainer: ‘Alessandro Bellino <alessandro_bellino@gmx.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
sim_Vn_stat  8.539  0.110   9.904
sim_de_stat  8.546  0.032   9.491
sim_Zn_stat  8.524  0.032   9.520
Andrews.test 4.919  0.048   6.298
Maintainer: ‘Arunabha Majumdar <statgen.arunabha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arunabha",
                      family = "Majumdar",
                      role = c("aut", "cre"),
                      email = "statgen.arunabha@gmail.com"),
               person(given = "Tanushree",
                      family = "Haldar",
                      role = "aut",
                      email = "tanushree.haldar@gmail.com"),
               person(given = "John",
                      family = "Witte",
                      role = "ctb"))
as necessary.
Maintainer: ‘Yongwen Zhuang <zyongwen@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Yongwen",
                    family = "Zhuang",
                    role = c("aut", "cre"),
                    email = "zyongwen@umich.edu")
as necessary.
Specified C++11: please drop specification unless essential
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CPC.Rd: diana, pam, dbscan
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘R Barfield <barfieldrichard8@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Barfield",
                      role = "aut"),
               person(family = "R.",
                      role = "aut"),
               person(family = "Conneely",
                      role = "aut"),
               person(family = "K.",
                      role = "aut"),
               person(family = "Kilaru,V",
                      role = "aut"),
               person(given = "R",
                      family = "Barfield",
                      role = "cre",
                      email = "barfieldrichard8@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
cpg.perm.object  3.850  0.011   5.276
CpGassoc-package 3.685  0.068   5.042
cpg.perm         3.746  0.005   5.375
Maintainer: ‘Jun Chen <chen.jun2@mayo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jun",
                    family = "Chen",
                    role = c("aut", "cre"),
                    email = "Chen.Jun2@mayo.edu")
as necessary.
Maintainer: ‘Jeremie Riou <jeremie.riou@univ-angers.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jeremie",
                      family = "Riou",
                      role = c("aut", "cre"),
                      email = "jeremie.riou@univ-angers.fr"),
               person(given = "Benoit",
                      family = "Liquet",
                      role = "aut"))
as necessary.
Maintainer: ‘Gordon J. Ross <gordon@gordonjross.co.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Gordon", "J."),
                    family = "Ross",
                    role = c("aut", "cre"),
                    email = "gordon@gordonjross.co.uk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
File ‘cpp11qpdf/libs/cpp11qpdf.so’:
  Found ‘_ZSt4cerr’, possibly from ‘std::cerr’ (C++)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘__vprintf_chk’, possibly from ‘vprintf’ (C)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘srandom’, possibly from ‘srandom’ (C)
    Object: ‘libqpdf/libstatqpdf.a’
  Found ‘stdout’, possibly from ‘stdout’ (C)
    Object: ‘libqpdf/libstatqpdf.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Maintainer: ‘Luiz O. Gavião <luiz.gaviao67@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Luiz", "O."),
                      family = "Gavião",
                      role = c("aut", "cre"),
                      email = "luiz.gaviao67@gmail.com"),
               person(given = c("Annibal", "P."),
                      family = "Sant'Anna",
                      role = "aut"),
               person(given = c("Gilson", "B.A."),
                      family = "Lima",
                      role = "aut"),
               person(given = c("Pauli", "A.A."),
                      family = "Garcia.",
                      role = "aut"))
as necessary.
Maintainer: ‘Vincent Larmet <larmet.vincent@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vincent",
                    family = "Larmet",
                    role = c("aut", "cre"),
                    email = "larmet.vincent@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Andreas Kuehnapfel <andreas.kuehnapfel@imise.uni-leipzig.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andreas",
                    family = "Kuehnapfel",
                    role = c("aut", "cre"),
                    email = "andreas.kuehnapfel@imise.uni-leipzig.de")
as necessary.
Maintainer: ‘Ning Yilin <ningyilinnyl@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ning",
                      family = "Yilin",
                      role = c("aut", "cre"),
                      email = "ningyilinnyl@gmail.com"),
               person(given = c("Tan", "Chuen"),
                      family = "Seng",
                      role = "aut"))
as necessary.
Maintainer: ‘Jacob Anhøj <jacob@anhoej.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jacob",
                      family = "Anhoej",
                      role = "aut"),
               person(given = "Jacob",
                      family = "Anhøj",
                      role = "cre",
                      email = "jacob@anhoej.net"))
as necessary.
Maintainer: ‘Taylor Brown <trb5me@virginia.edu>’

The Description field contains
  Doucet and Pitt (2017) <arXiv:1511.04992>. If the 'rho=' argument of
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Stefanie Krügel <stefanie.kruegel@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Stefanie",
                      family = "Krügel",
                      role = c("aut", "cre"),
                      email = "stefanie.kruegel@gmail.com"),
               person(given = c("Alessandra", "R."),
                      family = "Brazzale"),
               person(role = "aut"),
               person(given = "Helmut",
                      family = "Kuechenhoff",
                      role = "aut"))
as necessary.
Maintainer: ‘Johann Gagnon-Bartsch <johanngb@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Johann",
                    family = "Gagnon-Bartsch",
                    role = c("aut", "cre"),
                    email = "johanngb@umich.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
cpt 7.691  0.146   9.746
Maintainer: ‘Jueyu Gao <jueyu@ualberta.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jueyu", "Gao", "&", "Linglong"),
                      family = "Kong",
                      role = "aut"),
               person(given = "Jueyu",
                      family = "Gao",
                      role = "cre",
                      email = "jueyu@ualberta.ca"))
as necessary.
Maintainer: ‘Francesco Bartolucci <francesco.bartolucci@unipg.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Francesco",
                      family = "Bartolucci",
                      role = c("aut", "cre"),
                      email = "francesco.bartolucci@unipg.it",
                      comment = "University of Perugia"),
               person(given = "Claudia",
                      family = "Pigini",
                      role = "aut",
                      comment = "University of Ancona \"Politecnica delle Marche\""),
               person(given = "Francesco",
                      family = "Valentini",
                      role = "aut",
                      comment = "University of Ancona \"Politecnica delle Marche\""))
as necessary.
Maintainer: ‘Francis Huang <flhuang2000@yahoo.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) sharedat.Rd:23: Lost braces
    23 | \doi{10.7910/DVN/YXMQZM}{Harvard dataverse}
       |                         ^
Examples with CPU (user + system) or elapsed time > 5s
                                   user system elapsed
summarize.posterior               7.376  0.008   9.140
sample.congruence.class.posterior 6.440  0.007   7.905
print.CRABSsets                   6.412  0.010   7.911
sample.congruence.class           5.755  0.008   7.123
congruent.models                  4.551  0.119   5.176
Maintainer: ‘Carsten Franz <carsten.franz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Carsten",
                    family = "Franz",
                    role = c("aut", "cre"),
                    email = "carsten.franz@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘cleaning.R’
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
get_dep 5.536  0.164   6.742
Maintainer: ‘Jim Lemon <drjimlemon@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jim",
                      family = "Lemon,",
                      role = "aut",
                      email = "drjimlemon@gmail.com"),
               person(given = "Jim",
                      family = "Lemon",
                      role = "cre",
                      email = "drjimlemon@gmail.com"))
as necessary.
Maintainer: ‘Gábor Csárdi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gábor",
                    family = "Csárdi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Maintainer: ‘Nick Kunz <nick.kunz@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Kunz",
                    role = c("aut", "cre"),
                    email = "nick.kunz@columbia.edu")
as necessary.
Maintainer: ‘Devin S. Johnson <devin.johnson@noaa.gov>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) crwPredict.Rd:54-68: Lost braces
    54 | \item("predTime"){
       |                  ^
checkRd: (-1) crwPredict.Rd:59: Lost braces
    59 |  no longer the default (see \item{return.type}). If the original data were 
       |                                  ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘pick_colors.R’ ‘scale_crayons.Rd’
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
crayons 5.882   0.12   7.826
Author field differs from that derived from Authors@R
  Author:    ‘Josep Pueyo-Ros [aut, cre] (<https://orcid.org/0000-0002-1236-5651>), Marcelo S. Perlin [rev] (@msperlin), João Martins [rev] (@zambujo)’
  Authors@R: ‘Josep Pueyo-Ros [aut, cre] (ORCID: <https://orcid.org/0000-0002-1236-5651>), Marcelo S. Perlin [rev] (github: @msperlin), João Martins [rev] (github: @zambujo)’
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
training_model 7.625  0.101   8.924
multi_grid     5.858  0.009   6.300
Maintainer: ‘Patrick Schnell <schnell.31@osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Patrick",
                      family = "Schnell",
                      role = c("aut", "cre"),
                      email = "schnell.31@osu.edu"),
               person(given = "Brad",
                      family = "Carlin",
                      role = "aut"))
as necessary.
Maintainer: ‘Tinniam V Ganesh <tvganesh.85@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Tinniam", "V"),
                    family = "Ganesh",
                    role = c("aut", "cre"),
                    email = "tvganesh.85@gmail.com")
as necessary.
Maintainer: ‘Jason D. Nielsen <jdn@math.carleton.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Jason", "D."),
                    family = "Nielsen",
                    role = c("aut", "cre"),
                    email = "drjdnielsen@gmail.com")
as necessary.
Maintainer: ‘Ashley Petersen <ashleyjpete@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ashley",
                    family = "Petersen",
                    role = c("aut", "cre"),
                    email = "ashleyjpete@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
crispRdesignRUI 4.824  0.307   6.514
Maintainer: ‘Rubens Jose Rosa <rubens@rubensjoserosa.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Adam Kucharski <aqcharski@interia.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Adam",
                    family = "Kucharski",
                    role = c("aut", "cre"),
                    email = "aqcharski@interia.pl")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘CRMetrics.R’ ‘CRMetrics.Rd’ ‘inner_functions.R’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
CRMetrics 4.358  0.129   5.081
Maintainer: ‘Henning Redestig <henning.red@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Henning",
                    family = "Redestig",
                    role = c("aut", "cre"),
                    email = "henning.red@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) normFit.Rd:39: Lost braces; missing escapes or markup?
    39 | {analytes}}
       | ^
checkRd: (-1) normPred.Rd:27: Lost braces
    27 | ode{standards}, \code{analytes}}
       |    ^
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
normalize 6.184  0.025   6.802
Examples with CPU (user + system) or elapsed time > 5s
                                           user system elapsed
examine                                   7.758  0.085   9.101
stopTrial                                 5.984  0.012   7.048
summary-PseudoDualSimulations-method      5.607  0.001   7.712
show-PseudoDualSimulationsSummary-method  5.475  0.044   6.180
plot-PseudoDualSimulations-missing-method 5.066  0.016   5.536
Maintainer: ‘Xiaowei Zhan <zhanxw@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiaowei",
                    family = "Zhan",
                    role = c("aut", "cre"),
                    email = "zhanxw@gmail.com")
as necessary.
Maintainer: ‘Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Mohamed", "El", "Fodil"),
                    family = "Ihaddaden",
                    role = c("aut", "cre"),
                    email = "ihaddaden.fodeil@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘crop.R’ ‘helpers.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  get_multi_silodata.Rd: tibble
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Bjoern Bornkamp <bbnkmp@mail.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Martin", "Oliver"),
                      family = "Sailer",
                      role = "aut"),
               person(given = "Bjoern",
                      family = "Bornkamp",
                      role = "cre",
                      email = "bbnkmp@mail.de"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
netgraph.crossnma.model 6.565  0.166   7.839
Maintainer: ‘Kornelius Rohmeyer <rohmeyer@small-projects.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kornelius",
                    family = "Rohmeyer",
                    role = c("aut", "cre"),
                    email = "rohmeyer@small-projects.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
crossrunem 7.71  0.004   8.413
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘officer.R’
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
crosstable 4.138   0.09   5.842
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  filter_slider.Rd: tag, HTML
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Author field differs from that derived from Authors@R
  Author:    ‘Davis Weaver [aut, cre] (0000-0003-3086-497X)’
  Authors@R: ‘Davis Weaver [aut, cre] (orcid: 0000-0003-3086-497X)’
Maintainer: ‘Pein Florian <f.pein@lancaster.ac.uk>’

The Description field contains
  <arXiv:2112.03220>. Can be customised by providing different
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Korbinian Strimmer <strimmerlab@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Korbinian",
                      family = "Strimmer.",
                      role = "aut"),
               person(given = "Korbinian",
                      family = "Strimmer",
                      role = "cre",
                      email = "strimmerlab@gmail.com"))
as necessary.
Maintainer: ‘Peter Meissner <retep.meissner@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Meissner",
                    role = c("aut", "cre"),
                    email = "retep.meissner@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Crossword.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Javier Espinosa <javier.espinosa.b@usach.cl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Javier",
                    family = "Espinosa",
                    role = c("aut", "cre"),
                    email = "javier.espinosa.b@usach.cl")
as necessary.
checkRd: (-1) confRegCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the constrained MLEs given beta_{0r}.}
       |                   ^
checkRd: (-1) confRegCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the constrained MLEs given beta_{0r}.}
       |                                                                                    ^
checkRd: (-1) confRegCCR.Rd:27: Lost braces; missing escapes or markup?
    27 | beta_{0r} in \code{paramVals}, which are those of interest, usually the ones
       |      ^
checkRd: (-1) confRegUCRandUCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the unconstrained MLEs given beta_{0r}.}
       |                   ^
checkRd: (-1) confRegUCRandUCCR.Rd:24: Lost braces; missing escapes or markup?
    24 | of interest, beta_{0r}, and the remaining ones are the unconstrained MLEs given beta_{0r}.}
       |                                                                                      ^
checkRd: (-1) confRegUCRandUCCR.Rd:27: Lost braces; missing escapes or markup?
    27 | beta_{0r} in \code{paramVals}, which are those of interest, usually the ones
       |      ^
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
confRegCCR 3.651  0.174   5.022
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
crqa-package 5.083  0.747   6.589
crqa         4.238  0.408   6.020
Maintainer: ‘Aurelien Latouche <aurelien.latouche@cnam.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bingqing",
                      family = "Zhou",
                      role = "aut"),
               person(given = "Aurelien",
                      family = "Latouche",
                      role = c("aut", "cre"),
                      email = "aurelien.latouche@cnam.fr"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
crrstep 5.201  0.003   6.341
Maintainer: ‘Michael Klein <michael.klein@yale.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Klein",
                    role = c("aut", "cre"),
                    email = "michael.klein@yale.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
getPoolSizes          12.505  0.016  14.975
getCoreRS              9.800  0.000  11.620
makeSubCoreList        8.693  0.027  13.735
makeFilteredImList     8.302  0.015  10.015
evaluateListOfIMs      8.192  0.046   9.249
getCoreK               8.224  0.000  10.060
getBestRsList          8.095  0.000   8.615
makePhaseTwoImList     7.485  0.106  12.029
makePhaseThreeImList   6.503  0.004   7.578
makePhaseOneOrderedRM  4.952  0.000   5.917
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  crsra_anonymize.Rd: digest
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
crsra_import        1.654  0.272   7.283
crsra_import_course 1.302  0.285   6.192
'library' or 'require' call not declared from: ‘ggplot2’
Maintainer: ‘Dae Woong Ham <daewoongham@g.harvard.edu>’

The Description field contains
  to Test Causal Hypotheses in Conjoint Analysis" <arXiv:2201.08343>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Michael A Rotondi <mrotondi@yorku.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Michael", "A"),
                    family = "Rotondi",
                    role = c("aut", "cre"),
                    email = "mrotondi@yorku.ca")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
CRTpower 6.619   1.55  10.079
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘helpers.R’
Maintainer: ‘Benjamin M. Taylor <benjamin.taylor.software@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Benjamin", "M.", "Taylor", "Additional", "contributions", "Bikash", "Parida", "Jacob"),
                      family = "Davies",
                      role = "aut"),
               person(given = c("Benjamin", "M."),
                      family = "Taylor",
                      role = "cre",
                      email = "benjamin.taylor.software@gmail.com"))
as necessary.
checkRd: (-1) cruts-package.Rd:21: Lost braces
    21 | section{Dependencies}{
       |        ^
checkRd: (-1) cruts-package.Rd:21-24: Lost braces
    21 | section{Dependencies}{
       |                      ^
checkRd: (-1) cruts-package.Rd:26: Lost braces
    26 | section{Citation}{
       |        ^
checkRd: (-1) cruts-package.Rd:26-28: Lost braces
    26 | section{Citation}{
       |                  ^
checkRd: (-1) cruts-package.Rd:30-32: Lost braces
    30 | references{
       |           ^
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
fatpet 5.799  0.005   6.323
Maintainer: ‘Ziqiang Lin <ziqiang.lin@nyulangone.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ziqiang",
                      family = "Lin",
                      role = c("aut", "cre"),
                      email = "ziqiang.lin@nyulangone.org"),
               person(given = c("Eugene", "M"),
                      family = "Laska",
                      role = "aut"),
               person(given = c("Carole", "E"),
                      family = "Siegel",
                      role = "aut"),
               person(given = "Wangjian",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Qiaoxuan",
                      family = "Lin",
                      role = "aut"),
               person(given = "Bo",
                      family = "Ye.",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘crypto_global_quotes.R’ ‘crypto_history.R’ ‘crypto_info.R’
    ‘crypto_listings.R’
Maintainer: ‘Vivian R. Steiger <viv.datascientist@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Vivian", "R."),
                    family = "Steiger",
                    role = c("aut", "cre"),
                    email = "viv.datascientist@gmail.com")
as necessary.
Maintainer: ‘Haydar Demirhan <haydar.demirhan@rmit.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haydar",
                    family = "Demirhan",
                    role = c("aut", "cre"),
                    email = "haydar.demirhan@rmit.edu.au",
                    comment = c(ORCID = "0000-0002-8565-4710"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) calculate_cell_volume.Rd:16: Lost braces; missing escapes or markup?
    16 | V A real number. The volume (in angstroms^3 or angstroms^{-3})
       |                                                          ^
Maintainer: ‘Claudio Pozo Valenzuela <claudiopozova@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Claudio", "Pozo"),
                      family = "Valenzuela",
                      role = c("aut", "cre"),
                      email = "claudiopozova@gmail.com"),
               person(given = "Saddys",
                      family = "Rodriguez-Llamazares",
                      role = "aut"))
as necessary.
Maintainer: ‘Alessandra R. Brazzale <alessandra.brazzale@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("S", "original", "by", "Alessandra", "R.", "Brazzale.", "R", "port", "by", "Alessandra", "R.", "Brazzale"),
                      family = "<alessandra.brazzale@unipd.it>.",
                      role = "aut",
                      email = "alessandra.brazzale@unipd.it"),
               person(given = c("Alessandra", "R."),
                      family = "Brazzale",
                      role = "cre",
                      email = "alessandra.brazzale@unipd.it"))
as necessary.

Problems when reading CITATION file:
  It is recommended to use ‘given’ instead of ‘first’.
  It is recommended to use ‘given’ instead of ‘middle’.
  It is recommended to use ‘family’ instead of ‘last’.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zhicheng Du<dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Maintainer: ‘Michael P. Fay <mfay@niaid.nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sungwook",
                      family = "Kim",
                      role = "aut"),
               person(given = c("Michael", "P."),
                      family = "Fay",
                      role = "cre",
                      email = "mfay@niaid.nih.gov"))
as necessary.
Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
CSclone 4.916  0.069   6.591
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
resampleData 4.401  0.091   5.247
Maintainer: ‘Anantha Janakiraman <anantharaman.j@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Anantha",
                    family = "Janakiraman",
                    role = c("aut", "cre"),
                    email = "anantharaman.j@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
ch_flow_raster_qa 4.07   0.06   5.723
Maintainer: ‘Koen W. De Bock <kdebock@audencia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Koen", "W."),
                      family = "De Bock",
                      role = c("aut", "cre"),
                      email = "kdebock@audencia.com"),
               person(given = "Kristof",
                      family = "Coussement",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Lessmann",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
symm_fit_ind_EM              9.507  0.035  12.604
symm_fit_ind_EM_noAssumption 9.336  0.013  12.197
symm_fit_cor_EM              6.105  0.085   9.132
symm_fit_cor_EM_noAssumption 5.959  0.005   8.617
symm_fit_cor_EM_fulllik      5.412  0.047   7.640
Maintainer: ‘Aixiang Jiang <aijiang@bccrc.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Aixiang",
                    family = "Jiang",
                    role = c("aut", "cre", "cph"),
                    email = "aijiang@bccrc.ca",
                    comment = c(ORCID = "0000-0002-6153-7595"))
as necessary.

The Description field contains
  <arXiv:1603.02754>, - Aoki et al. (2023) <doi:10.1200/JCO.23.01115>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
csmpvModelling 9.386  0.106  12.159
Maintainer: ‘Dmitry Pavlyuk <Dmitry.V.Pavlyuk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dmitry",
                      family = "Pavlyuk",
                      role = c("aut", "cre"),
                      email = "dmitry.v.pavlyuk@gmail.com"),
               person(given = "Eugene",
                      family = "Girtcius",
                      role = "aut"))
as necessary.
Maintainer: ‘Junho Yang <junhoyang@stat.tamu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Junho",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "junhoyang@stat.tamu.edu")
as necessary.
Maintainer: ‘Caleb Lucas <calebjlucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Caleb",
                      family = "Lucas",
                      role = c("aut", "cre"),
                      email = "calebjlucas@gmail.com",
                      comment = "https://caleblucas.com/"),
               person(given = "Joshua",
                      family = "McCrain",
                      role = "aut",
                      comment = "http://joshuamccrain.com/"))
as necessary.
Maintainer: ‘Caleb Lucas <calebjlucas@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Caleb",
                      family = "Lucas",
                      role = c("aut", "cre"),
                      email = "calebjlucas@gmail.com",
                      comment = "https://caleblucas.com/"),
               person(given = "Joshua",
                      family = "McCrain",
                      role = "aut",
                      comment = "http://joshuamccrain.com/"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
resample_csquares    9.310  0.079  10.650
st_as_stars.csquares 7.168  0.046   8.768
tidyverse            4.095  0.000   5.439
Maintainer: ‘Deniz Yenigun <deniz.yenigun@bilgi.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Deniz",
                      family = "Yenigun",
                      role = c("aut", "cre"),
                      email = "deniz.yenigun@bilgi.edu.tr"),
               person(given = "Gunes",
                      family = "Ertan",
                      role = "aut"),
               person(given = "Michael",
                      family = "Siciliano",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘atm.Rd’:
    http://dx.doi.org/10.1016/j.socnet.2012.06.004
  File ‘cssTools-package.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
  File ‘highTechManagers.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
  File ‘s14.Rd’:
    http://dx.doi.org/10.1007/BF01896809
  File ‘sliceQuality.Rd’:
    http://dx.doi.org/10.1016/0378-8733(87)90009-8
    http://dx.doi.org/10.1016/j.socnet.2012.06.004
Maintainer: ‘Jonas M. B. Haslbeck <jonas.haslbeck@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jonas", "M.", "B."),
                      family = "Haslbeck",
                      role = c("aut", "cre"),
                      email = "jonas.haslbeck@gmail.com"),
               person(given = c("Dirk", "U."),
                      family = "Wulff",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
csvy 6.931  0.225   8.568
Maintainer: ‘Tim Bergsma <bergsmat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tim",
                    family = "Bergsma",
                    role = c("aut", "cre"),
                    email = "bergsmat@gmail.com")
as necessary.
Maintainer: ‘Robin Gower <csvwr@infonomics.ltd.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Robin",
                    family = "Gower",
                    role = c("aut", "cre"),
                    email = "csvwr@infonomics.ltd.uk")
as necessary.
Maintainer: ‘Thomas J. Leeper <thosjleeper@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
ci.table 8.643  0.124  11.134
mph.fit  4.757  0.004   6.920
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Francois Ritter <ritter.francois@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
mle.getEncodingLength 4.773  0.039   6.212
mle.getMinPtDistance  4.359  0.046   5.718
mle.getPtDist         4.250  0.032   5.184
mle.getPtBSbyK        4.218  0.016   5.284
Maintainer: ‘Clark Fitzgerald <fitzgerald@csus.edu>’

The BugReports field in DESCRIPTION has
  https://github.com/julianofhernandez/ctf
which should likely be
  https://github.com/julianofhernandez/ctf/issues
instead.
Maintainer: ‘Ningning Xu <ningningxu312@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ningning",
                    family = "Xu",
                    role = c("aut", "cre"),
                    email = "ningningxu312@gmail.com")
as necessary.
Maintainer: ‘Danny Arends <Danny.Arends@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Danny",
                      family = "Arends",
                      role = c("aut", "cre"),
                      email = "Danny.Arends@gmail.com"),
               person(given = "Yang",
                      family = "Li",
                      role = "aut"),
               person(given = c("Gudrun", "A"),
                      family = "Brockmann",
                      role = "aut"),
               person(given = c("Ritsert", "C"),
                      family = "Jansen",
                      role = "aut"),
               person(given = c("Robert", "W"),
                      family = "Williams",
                      role = "aut"),
               person(given = "Pjotr",
                      family = "Prins",
                      role = "aut"))
as necessary.
Maintainer: ‘Cheng Ju <jucheng1992@gmail.com>’

The Description field contains
  algorithm (Ju et al. (2017) <arXiv:1706.10029>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  akde.Rd: res
  as.telemetry.Rd: fread
  ctmm-FAQ.Rd: zoom
  projection.Rd: CRS
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Jim Liu <jimliu741523@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jim",
                      family = "Liu",
                      role = c("aut", "cre"),
                      email = "jimliu741523@gmail.com"),
               person(given = "Quan",
                      family = "Gu",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ctpm.fit.Rd: slouch, plot.variogram
  variogram.Rd: plot.variogram
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Paolo Frumento <paolo.frumento@unipi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Paolo",
                    family = "Frumento",
                    role = c("aut", "cre"),
                    email = "paolo.frumento@unipi.it")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ctqr-package.Rd: pchreg
  ctqr.Rd: Surv, pchreg
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
deleteRingFromImage 4.692  0.633   6.762
addRingFromImage    4.031  0.636   5.917
verifyPith          3.697  0.687   5.074
plotImageProfile    3.824  0.531   5.914
calcAvgDens         3.358  0.682   5.076
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ctFit.Rd: ctModel
  ctModelFromFit.Rd: ctModel
  ctMultigroupFit.Rd: ctLongToWide, ctModel
  ctPostPredict.Rd: ctPlotArray
  ctRefineTo.Rd: ctModel
  ctsemOMX.Rd: ctModel
  summary.ctsemFit.Rd: ctModel
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
ctGenerateFromFit 8.311  0.288   9.246
ctModelFromFit    8.115  0.207   8.775
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
ctPostPredPlots 6.587  0.119   9.195
ctPredictTIP    4.277  0.049   5.773
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
calculate_subfeatures 4.073  0.055   5.341
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Maintainer: ‘Kartikeya Bolar <kartikeya.bolar@tapmi.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Kartikeya",
                    family = "Bolar",
                    role = c("aut", "cre"),
                    email = "kartikeya.bolar@tapmi.edu.in")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plot.ctsmTMB.fit 3.847  0.379   5.691
Maintainer: ‘John T. Willse <jtwillse@uncg.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "T."),
                    family = "Willse",
                    role = c("aut", "cre"),
                    email = "jtwillse@uncg.edu")
as necessary.
Maintainer: ‘John T. Willse <willse@uncg.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("John", "T."),
                    family = "Willse",
                    role = c("aut", "cre"),
                    email = "willse@uncg.edu")
as necessary.
Found the following files/directories:
  ‘Hello.csv’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘connection-config.R’ ‘read-float.R’ ‘read-hex.R’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘apply_by_blocks.R’ ‘balance_by_blocks.Rd’ ‘balance_matrix.R’
    ‘balance_matrix.Rd’ ‘make_non_negative.Rd’ ‘round_by_blocks.Rd’
    ‘round_matrix.R’ ‘round_matrix.Rd’ ‘round_vector.Rd’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
check_cds 5.096  0.242   7.084
File ‘cubature/libs/cubature.so’:
  Found ‘exit’, possibly from ‘exit’ (C)
    Objects: ‘Cuba/libcuba.a’, ‘cubature-1.0.4/libcubature.a’
  Found ‘puts’, possibly from ‘printf’ (C), ‘puts’ (C)
    Object: ‘Cuba/libcuba.a’
  Found ‘sprintf’, possibly from ‘sprintf’ (C)
    Object: ‘Cuba/libcuba.a’
  Found ‘stderr’, possibly from ‘stderr’ (C)
    Object: ‘cubature-1.0.4/libcubature.a’
  Found ‘stdout’, possibly from ‘stdout’ (C)
    Object: ‘Cuba/libcuba.a’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘accessors.Rd’ ‘as-cubble.R’ ‘as_cubble.Rd’ ‘check-key.R’
    ‘climate-data.Rd’ ‘covid.Rd’ ‘cubble-attrs.R’ ‘cubble-class.R’
    ‘cubble-print.R’ ‘dplyr.R’ ‘dplyr.Rd’ ‘face-spatial-temporal.R’
    ‘face.Rd’ ‘glyph.R’ ‘glyph.Rd’ ‘make_spatial_sf.Rd’
    ‘make_temporal_tsibble.Rd’ ‘matching.R’ ‘matching.Rd’ ‘netcdf.R’
    ‘sf.R’ ‘test-data.Rd’ ‘tsibble.R’ ‘tsibble.Rd’ ‘unfold.R’ ‘unfold.Rd’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
matching 3.698   0.04   5.032
Maintainer: ‘Wei-Chen Chen <wccsnow@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Alec Stephenson <alec_stephenson@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alec",
                      family = "Stephenson.",
                      role = "aut"),
               person(given = "Alec",
                      family = "Stephenson",
                      role = "cre",
                      email = "alec_stephenson@hotmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  solvers. See Rokicki, T. (2008) <arXiv:0803.3435> for the Kociemba
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Charles-Édouard Giguère <ce.giguere@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Charles-Édouard",
                    family = "Giguère",
                    role = c("aut", "cre"),
                    email = "ce.giguere@gmail.com")
as necessary.
Maintainer: ‘Kevin Stadler <a00425926@unet.univie.ac.at>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘mantel.test.Rd’:
    https://doi.org/10.1093/sysbio/32.1.21
    https://doi.org/10.1086/341527
Maintainer: ‘Shuo Li <skyli@bu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Shuo",
                      family = "Li",
                      role = c("aut", "cre"),
                      email = "skyli@bu.edu"),
               person(given = "Xuan",
                      family = "Liu",
                      role = "aut",
                      email = "liuxuan@bu.edu"),
               person(given = "Qiong",
                      family = "Yang",
                      role = "aut",
                      email = "qyang@bu.edu"))
as necessary.
Maintainer: ‘Vito M.R. Muggeo <vito.muggeo@unipa.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Vito", "M.R."),
                    family = "Muggeo",
                    role = c("aut", "cre"),
                    email = "vito.muggeo@unipa.it")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  jumpoints.Rd: lars
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Arturo Erdely <arturo.erdely@comunidad.unam.mx>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arturo",
                      family = "Erdely",
                      role = c("aut", "cre"),
                      email = "arturo.erdely@comunidad.unam.mx"),
               person(given = "Ian",
                      family = "Castillo",
                      role = "aut"))
as necessary.

File 'R/cumstats-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Jue (Marquis) Hou <hou00123@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jue",
                      family = "Hou",
                      role = "aut",
                      comment = "Marquis"),
               person(given = "Evan",
                      family = "Ren",
                      role = "aut"),
               person(given = "Jue",
                      family = "Hou",
                      role = "cre",
                      email = "hou00123@umn.edu",
                      comment = "Marquis"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Survcure.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘create_cure_dataframe.R’ ‘cure_plot.R’ ‘resample_residuals.R’
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
calc.Crude.quantile 5.390  0.132   6.200
GenFlexCureModel    4.673  0.404   6.297
Running ‘spelling.R’ [0s/0s]
  Running ‘testthat.R’ [12s/74s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(curl)
  Using libcurl 8.13.0 with GnuTLS/3.8.9
  > 
  > # Comply with CRAN policy: skip tests if no internet
  > if(curl::has_internet()){
  +   test_check("curl")
  + }
  This is libcurl version 8.13.0 with GnuTLS/3.8.9 
  Using test server: https://hb.opencpu.org 
  [ FAIL 1 | WARN 0 | SKIP 4 | PASS 257 ]
  
  ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
  • On CRAN (4): 'test-idn.R:4:3', 'test-multi-download.R:14:3',
    'test-seek.R:2:3', 'test-winssl.R:2:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-handle.R:139:3'): Error classes ──────────────────────────────
  `curl_fetch_memory("https://httpbin.org/delay/10", handle = new_handle(timeout = 1L))` did not throw an error.
  
  [ FAIL 1 | WARN 0 | SKIP 4 | PASS 257 ]
  Error: Test failures
  Execution halted
Maintainer: ‘Eva Koritakova <koritakova@iba.muni.cz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Eva",
                      family = "Koritakova",
                      role = c("aut", "cre"),
                      email = "koritakova@iba.muni.cz",
                      comment = c(ROR = "Janousova")),
               person(given = "Tomas",
                      family = "Pavlik",
                      role = "aut"),
               person(given = "Jiri",
                      family = "Mayer",
                      role = "aut"),
               person(given = "Ladislav",
                      family = "Dusek",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘plot_curriculum_graph.R’
Maintainer: ‘Thomas Lin Pedersen <thomasp85@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Thomas", "Lin"),
                    family = "Pedersen",
                    role = c("aut", "cre"),
                    email = "thomasp85@gmail.com")
as necessary.
Maintainer: ‘Chris Mann <cmann3@unl.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Chris",
                    family = "Mann",
                    role = c("aut", "cre"),
                    email = "cmann3@unl.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
ComputeConfIntervals 4.711      0    5.86
Maintainer: ‘Christopher Murphy <cmurphy0313@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kimihiro",
                      family = "Noguchi",
                      role = "aut",
                      email = "kimihiro.noguchi@wwu.edu"),
               person(given = "Christopher",
                      family = "Murphy",
                      role = "cre",
                      email = "cmurphy0313@gmail.com"))
as necessary.
Found the following files/directories:
  ‘Adjusted_p_values.pdf’ ‘Effect_Size_Curves.pdf’
  ‘Mean_Difference_Curves.pdf’
Maintainer: ‘Pavlo Mozharovskyi <pavlo.mozharovskyi@telecom-paristech.fr>’

The Description field contains
  (2019) <arXiv:1901.00180>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
plot.curvHDRfilter 4.399   0.23   5.993
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
invcurve 8.933  0.046  11.020
curve    8.604  0.027   9.671
curveopt 8.558  0.055  10.494
plot     8.361  0.012  10.166
predict  8.308  0.008   9.501
Maintainer: ‘Koen W. De Bock <kdebock@audencia.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Koen", "W."),
                    family = "De Bock",
                    role = c("aut", "cre"),
                    email = "kdebock@audencia.com")
as necessary.
Maintainer: ‘Paul Kabaila <p.kabaila@latrobe.edu.au>’

The Description field contains
  Kabaila (2022) <arXiv:2211.04729>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Iago Montero Nunez <iagomontero95@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Iago", "Montero"),
                      family = "Nuñez",
                      role = "aut"),
               person(given = c("Iago", "Montero"),
                      family = "Nunez",
                      role = "cre",
                      email = "iagomontero95@gmail.com"))
as necessary.
Maintainer: ‘Boxiang Wang <boxiang-wang@uiowa.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Douglas", "M."),
                      family = "Hawkins",
                      role = "aut"),
               person(given = c("David", "H."),
                      family = "Olwell",
                      role = "aut"),
               person(given = "Boxiang",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "boxiang-wang@uiowa.edu"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Yimin Chen <chenyimin0226@126.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yimin",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "chenyimin0226@126.com"),
               person(given = "Zhang",
                      family = "Jinxin",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
plot_epx 6.441  0.063   7.925
epx_mtw  4.359  0.025   5.474
Maintainer: ‘Erin LeDell <oss@ledell.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Erin",
                      family = "LeDell",
                      role = c("aut", "cre"),
                      email = "oss@ledell.org"),
               person(given = "Maya",
                      family = "Petersen",
                      role = "aut"),
               person(given = "Mark",
                      family = "van der Laan",
                      role = "aut"))
as necessary.
Maintainer: ‘Jose Gama <rxprtgama@gmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘scoreRoth28Graphic.Rd’:
    http://dx.doi.org/10.1016/S0042-6989(97)00433-1
Maintainer: ‘Ben Marwick <benmarwick@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: www.jstor.org/stable/90707
    From: inst/doc/how_to_test_CVs.html
  URI: CONDUCT.md
    From: README.md
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
cv_gee 5.133  0.085   6.574
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
grid.search 6.676   0.01   8.176
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
groupFit 6.173      0   7.774
Maintainer: ‘Romain Azais <romain.azais@inria.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Romain",
                      family = "Azais",
                      role = c("aut", "cre"),
                      email = "romain.azais@inria.fr"),
               person(given = "Sandie",
                      family = "Ferrigno",
                      role = "aut"),
               person(given = "Marie-Jose",
                      family = "Martinez",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
Pigs        11.948  0.019  13.970
cv.merMod    8.996  0.008  10.513
cv.function  5.915  0.004   7.508
Maintainer: ‘Chongliang Luo <chongliang.luo@uconn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chongliang",
                      family = "Luo",
                      role = c("aut", "cre"),
                      email = "chongliang.luo@uconn.edu"),
               person(given = "Kun",
                      family = "Chen.",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  SparseCCA.Rd: CCA, CCA.permute
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Tammo Krueger <tammokrueger@googlemail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tammo",
                      family = "Krueger",
                      role = c("aut", "cre"),
                      email = "tammokrueger@googlemail.com"),
               person(given = "Mikio",
                      family = "Braun",
                      role = "aut"))
as necessary.
Maintainer: ‘Donghoh Kim <donghoh.kim@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Donghoh",
                      family = "Kim",
                      role = c("aut", "cre"),
                      email = "donghoh.kim@gmail.com"),
               person(given = "Hee-Seok",
                      family = "Oh",
                      role = "aut",
                      email = "heeseok@stats.snu.ac.kr"))
as necessary.
Maintainer: ‘Jiqiang Guo <guojq28@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jiqiang",
                    family = "Guo",
                    role = c("aut", "cre"),
                    email = "guojq28@gmail.com")
as necessary.
Maintainer: ‘Gabor Csardi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gabor",
                    family = "Csardi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Maintainer: ‘Peter Biber <castor.fiber@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Biber",
                    role = c("aut", "cre"),
                    email = "castor.fiber@gmx.de")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  simulate_cycloSurv.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
plot.cmfit    4.238  0.079   5.563
fit_cyclomort 4.018  0.079   5.864
summary.cmfit 3.723  0.010   5.111
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Cramer_vonMises.Rd: Copula-class
  Cylcop.Rd: Copula-class
  ccylcop.Rd: Copula-class
  cyl_copula-class.Rd: Copula-class
  cyl_rect_combine-class.Rd: Copula-class
  cyl_rect_combine.Rd: Copula-class
  cyl_rot_combine-class.Rd: Copula-class
  cyl_rot_combine.Rd: Copula-class
  fit_cylcop_ml.Rd: Copula-class, fitCopula
  full2half_circ.Rd: circular
  half2full_circ.Rd: circular
  joint.Rd: Copula-class
  numerical_conditional_cop.Rd: Copula-class
  numerical_inv_conditional_cop.Rd: Copula-class
  plot_cop_surf.Rd: Copula-class
  wasserstein.Rd: Copula-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) fit.Rd:37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fit.Rd:38: Lost braces in \itemize; meant \describe ?
checkRd: (-1) fit.Rd:39: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
geom_fan 5.568  0.167   7.354
Maintainer: ‘Boris P Hejblum <boris.hejblum@u-bordeaux.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chariff",
                      family = "Alkhassim",
                      role = "aut"),
               person(given = c("Boris", "P"),
                      family = "Hejblum",
                      role = c("aut", "cre"),
                      email = "boris.hejblum@u-bordeaux.fr"),
               person(given = "Anthony",
                      family = "Devaux",
                      role = "aut"),
               person(given = c("Van", "Hung", "Huynh"),
                      family = "Tran",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) CytofTree.Rd:47-48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytofTree.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytofTree.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytofTree.Rd:51-52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytofTree.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytofTree.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytomeTree.Rd:33-34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytomeTree.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytomeTree.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) CytomeTree.Rd:37-38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) RetrievePops.Rd:20-21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) RetrievePops.Rd:22-23: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
cyt_pca 3.827  0.203   5.219
Maintainer: ‘Miguel Ferreiro-Díaz <miguel.ferreiro.diaz@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ConfMatrix.Rd: R6
  D2MCS.Rd: getModelInfo
  GainRatioHeuristic.Rd: gain.ratio
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Christopher Gandrud <christopher.gandrud@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christopher",
                    family = "Gandrud",
                    role = c("aut", "cre"),
                    email = "christopher.gandrud@gmail.com")
as necessary.
Maintainer: ‘Mauricio Vargas <oec@media.mit.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mauricio",
                      family = "Vargas",
                      role = c("aut", "cre"),
                      email = "oec@media.mit.edu"),
               person(given = "Joshua",
                      family = "Kunst",
                      role = "aut"),
               person(given = "Dave",
                      family = "Landry",
                      role = "ctb"),
               person(family = "Datawheel",
                      role = "cph"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘d3TreeFunctions.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  StoragehubManager.Rd: R6Class
  d4storagehub4RLogger.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "John",
                    family = "Maindonald",
                    role = c("aut", "cre"),
                    email = "jhmaindonald@gmail.com")
as necessary.
Maintainer: ‘W. John Braun <john.braun@ubc.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("John", "H"),
                      family = "Maindonald",
                      role = "aut",
                      email = "john@statsresearch.co.nz"),
               person(given = c("W.", "John"),
                      family = "Braun",
                      role = c("aut", "cre"),
                      email = "john.braun@ubc.ca"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DAAGtheme.Rd: theEconomist.theme, standard.theme, simpleTheme,
    custom.theme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
houseprices 4.542  0.002   5.887
checkRd: (-1) fpiter.Rd:55-58: Lost braces
    55 |     \code{tol}{  A small, positive scalar that determines when iterations
       |               ^
checkRd: (-1) fpiter.Rd:60-61: Lost braces
    60 |     \code{maxiter}{  An integer denoting the maximum limit on the number of
       |                   ^
checkRd: (-1) fpiter.Rd:63-65: Lost braces
    63 |     \code{trace}{  A logical variable denoting whether some of the intermediate
       |                 ^
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘clean_land_points.R’ ‘join_mpa_data.R’ ‘join_mpa_data.Rd’
    ‘join_ports_locations.R’ ‘model_vms.R’ ‘vms_clean.R’
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
clean_land_points 6.131  0.168   7.827
Maintainer: ‘James Curran <j.curran@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Curran",
                      role = c("aut", "cre"),
                      email = "j.curran@auckland.ac.nz"),
               person(given = "Danny",
                      family = "Chang",
                      role = "aut"))
as necessary.
checkRd: (-1) formatScientificTeX.Rd:33: Lost braces; missing escapes or markup?
    33 | function will return  " 3.0\\\\times 10^{2}"
       |                                         ^
Maintainer: ‘Johannes Textor <johannes.textor@gmx.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Johannes",
                      family = "Textor",
                      role = c("aut", "cre"),
                      email = "johannes.textor@gmx.de"),
               person(given = "Benito",
                      family = "van der Zander",
                      role = "aut"),
               person(given = "Ankur",
                      family = "Ankan",
                      role = "aut"))
as necessary.
Maintainer: ‘Lutz P Breitling <l.breitling@posteo.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Lutz", "P"),
                    family = "Breitling",
                    role = c("aut", "cre"),
                    email = "l.breitling@posteo.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
dagwood 6.101  0.211   7.248
Maintainer: ‘Niklas Hohmann <Niklas.Hohmann@fau.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Niklas",
                    family = "Hohmann",
                    role = c("aut", "cre"),
                    email = "niklas.hohmann@fau.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
DAISIE_sim        5.970  0.000   7.370
DAISIE_plot_input 4.783  0.153   6.383
Maintainer: ‘Ali Uenlue <ali.uenlue@tum.de>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
iita     4.931   0.07   5.974
variance 3.993   0.00   5.042
Maintainer: ‘Przemyslaw Biecek <przemyslaw.biecek@gmail.com>’

The Description field contains
  in (Biecek 2018) <arXiv:1806.08915>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot.predict_parts.Rd: break_down, local_attributions,
    local_interactions
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Szymon Maksymiuk <sz.maksymiuk@gmail.com>’

The Description field contains
  'DALEXtra' creates 'DALEX' Biecek (2018) <arXiv:1806.08915> explainer
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                                user system elapsed
explain_xgboost                5.970  0.533   5.100
plot.trainig_test_comparison   5.883  0.270   7.597
trainig_test_comparison        5.770  0.344   7.540
print.training_test_comparison 4.901  0.381   6.062
Author field differs from that derived from Authors@R
  Author:    ‘Eduardo Ogasawara [aut, ths, cre] (<https://orcid.org/0000-0002-0466-0626>), Diego Salles [aut, ths], Federal Center for Technological Education of Rio de Janeiro (CEFET/RJ) [cph] (CEFET/RJ)’
  Authors@R: ‘Eduardo Ogasawara [aut, ths, cre] (ORCID: <https://orcid.org/0000-0002-0466-0626>), Diego Salles [aut, ths], Federal Center for Technological Education of Rio de Janeiro (CEFET/RJ) [cph] (organization: CEFET/RJ)’
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
reg_tune 5.302  0.017   7.577
Maintainer: ‘Brecht Devleesschauwer <brechtdv@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘DALY-package.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
  File ‘DALYcalculator.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
  File ‘setStdLE.Rd’:
    http://dx.doi.org/10.1007/s00038-014-0552-z
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
detect_damage 6.569  0.155    8.64
Maintainer: ‘Damian Siniakowicz <DamianSiniakowicz@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Damian",
                    family = "Siniakowicz",
                    role = c("aut", "cre"),
                    email = "damiansiniakowicz@gmail.com")
as necessary.
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Rampal", "S.", "Etienne", "&", "Alex", "L."),
                      family = "Pigot",
                      role = "aut"),
               person(given = c("Rampal", "S."),
                      family = "Etienne",
                      role = "cre",
                      email = "r.s.etienne@rug.nl"))
as necessary.
Maintainer: ‘David Garibay <dgari039@uottawa.ca>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘beta_params.Rd’:
    \keyword{distribution;}
  File ‘calc_evpi.Rd’:
    \keyword{information;}
  File ‘dirichlet_params.Rd’:
    \keyword{distribution;}
  File ‘gamma_params.Rd’:
    \keyword{distribution;}
  File ‘lnorm_params.Rd’:
    \keyword{distribution;}
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Dirk", "Eddelbuettel", "with", "contributions", "by", "Brodie"),
                      family = "Gaslam",
                      role = "aut"),
               person(given = "Kevin",
                      family = "Denny",
                      role = "aut"),
               person(given = "Kabira",
                      family = "Namit",
                      role = "aut"),
               person(given = "Colin",
                      family = "Gillespie",
                      role = "aut"),
               person(given = "R",
                      family = "Core",
                      role = "aut"),
               person(given = "Josh",
                      family = "Ulrich",
                      role = "aut"),
               person(given = c("Jordan", "Mark"),
                      family = "Barbone",
                      role = "aut"),
               person(given = "Bill",
                      family = "Dunlap",
                      role = "aut"),
               person(family = "others.",
                      role = "aut"),
               person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = "cre",
                      email = "edd@debian.org"))
as necessary.
Maintainer: ‘Matteo Quartagno <m.quartagno@ucl.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matteo",
                    family = "Quartagno",
                    role = c("aut", "cre"),
                    email = "m.quartagno@ucl.ac.uk")
as necessary.

The Description field contains
  et al. (2019) <arXiv:1905.00241>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Valeri Voev <v_voev@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Valeri",
                    family = "Voev",
                    role = c("aut", "cre"),
                    email = "v_voev@yahoo.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
dapper_sample 3.053  0.115   7.915
Maintainer: ‘Dorota Desaulle <dorota.desaulle@u-paris.fr>’

The Description field contains
  <arXiv:2103.09872>).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Carlos P. Carmona <perezcarmonacarlos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Carlos", "P."),
                      family = "Carmona",
                      role = c("aut", "cre"),
                      email = "perezcarmonacarlos@gmail.com"),
               person(given = "Meelis",
                      family = "Partel",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
gl.pcoa         11.180  0.494  14.303
gl.plot.heatmap  3.777  0.080   5.066
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
gl.ld.distance  5.609  0.209   9.942
gl.ld.haplotype 3.281  0.044   5.988
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
gl.ld.distance 4.413  0.035   5.285
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
gl.infer.sex        6.384  0.103   8.475
gl.drop.sexlinked   5.586  0.092   6.651
gl.keep.sexlinked   5.178  0.020   7.233
gl.report.sexlinked 5.071  0.033   7.913
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gl.diagnostics.sim.Rd: gl.filter.callrate
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  gl.spatial.autoCorr.Rd: gl.propShared, gl.dist.ind
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
gl.costdistances  5.4  0.251    7.75
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
dgnpop 4.858  0.004   5.994
Maintainer: ‘Martijn Schuemie <schuemie@ohdsi.org>’

Found the following (possibly) invalid file URI:
  URI: ../../issues
    From: README.md
Maintainer: ‘Xiaorui(Jeremy) Zhu <zhuxiaorui1989@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaorui",
                      family = "Zhu",
                      role = "aut",
                      comment = "Jeremy"),
               person(given = "Xiaorui",
                      family = "Zhu",
                      role = "cre",
                      email = "zhuxiaorui1989@gmail.com",
                      comment = "Jeremy"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
getSfilesPath 2.105  8.931  85.184
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dcr_app.Rd: plotly
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) processFlow.Rd:14: Lost braces
    14 | \item{roundDigits}{Integer. If NA, numerics are not rounded before comparison. If /code{roundDigits} is specified, numerics are 
       |                                                                                        ^
checkRd: (-1) processFlow.Rd:15: Lost braces
    15 | rounded to /code{roundDigits} decimal places using \link[base]{round}.}
       |                 ^
checkRd: (-1) data_edit.Rd:137: Lost braces
   137 | code{data_edit} is a shiny application built on \code{rhandsontable} that is
       |     ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  configure_report.Rd: theme
  create_report.Rd: render
  drop_columns.Rd: data.table
  group_category.Rd: data.table
  plotDataExplorer.Rd: theme
  plotDataExplorer.grid.Rd: theme
  plotDataExplorer.multiple.Rd: theme, facet_wrap
  plotDataExplorer.single.Rd: theme
  plot_bar.Rd: geom_bar, theme_gray, theme
  plot_boxplot.Rd: geom_boxplot, geom_jitter, scale_y_continuous,
    theme_gray, theme
  plot_correlation.Rd: geom_text, theme_gray, theme
  plot_density.Rd: geom_density, scale_x_continuous, theme_gray, theme
  plot_histogram.Rd: geom_histogram, scale_x_continuous, theme_gray,
    theme
  plot_intro.Rd: geom_label, theme_gray, theme
  plot_missing.Rd: geom_label, theme_gray, theme
  plot_prcomp.Rd: geom_label, theme_gray, theme
  plot_qq.Rd: geom_qq, geom_qq_line, theme_gray, theme
  plot_scatterplot.Rd: geom_point, geom_jitter, scale_x_continuous,
    scale_y_continuous, theme_gray, theme
  plot_str.Rd: diagonalNetwork, radialNetwork
  set_missing.Rd: data.table
  split_columns.Rd: data.table
  update_columns.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Jonathan M. Gilligan <jonathan.gilligan@vanderbilt.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
File ‘DataGraph/libs/DataGraph.so’:
  Found non-API call to R: ‘Rf_isFrame’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Srivenkatesh Gandhi <srivenkateshg@sase.ssn.edu.in>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Srivenkatesh",
                      family = "Gandhi",
                      role = c("aut", "cre"),
                      email = "srivenkateshg@sase.ssn.edu.in"),
               person(given = c("Kreshnaa", "Raam", "S"),
                      family = "Bethusamy",
                      role = "aut",
                      email = "kreshnaaraamsb@sase.ssn.edu.in"))
as necessary.
Maintainer: ‘Dania M. Rodriguez <dmrodz@gmail.com>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘my.data.Rd’:
    http://doi.org/10.5281/zenodo.439543
Found the following files/directories:
  ‘my new data set.rds’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dataone-defunct.Rd: getData, getIdentifier, getFormatId,
    setPublicAccess, canRead, addData
  setPublicAccess.Rd: DataObject-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
DataPackageR-package 4.421  0.425   6.472
checkRd: (-1) build_date_factor.Rd:15: Lost braces; missing escapes or markup?
    15 | Map a vector of dates to a factor at one of these levels {"yearmonth", "yearquarter", "quarter", "month"}
       |                                                          ^
checkRd: (-1) build_date_factor.Rd:12: Lost braces; missing escapes or markup?
    12 | \item{type}{One of {"year", "yearquarter", "yearmonth", "quarter", "month"}}
       |                    ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  aggregate_by_key.Rd: data.table
  build_target_encoding.Rd: data.table
  fast_handle_na.Rd: copy, data.table
  generate_date_diffs.Rd: data.table
  set_col_as_character.Rd: data.table
  set_col_as_date.Rd: data.table
  set_col_as_factor.Rd: data.table
  set_col_as_numeric.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Chun-Sheng Liang <liangchunsheng@lzu.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Chun-Sheng",
                      family = "Liang",
                      role = c("aut", "cre"),
                      email = "liangchunsheng@lzu.edu.cn"),
               person(given = "Hao",
                      family = "Wu",
                      role = "aut"),
               person(given = "Hai-Yan",
                      family = "Li",
                      role = "aut"),
               person(given = "Qiang",
                      family = "Zhang",
                      role = "aut"),
               person(given = "Zhanqing",
                      family = "Li",
                      role = "aut"),
               person(given = "Ke-Bin",
                      family = "He",
                      role = "aut"),
               person(given = "Lanzhou",
                      family = "University",
                      role = "aut"),
               person(given = "Tsinghua",
                      family = "University",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘drwho_directors.Rd’ ‘drwho_episodes.Rd’ ‘drwho_writers.Rd’
    ‘torchwood_directors.Rd’ ‘torchwood_episodes.Rd’
    ‘torchwood_writers.Rd’
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
qc 4.119  0.144   5.028
Maintainer: ‘AJ Alon <api-maintainer@datarobot.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ron",
                      family = "Pearson",
                      role = "aut"),
               person(given = "Zachary",
                      family = "Deane-Mayer",
                      role = "aut"),
               person(given = "David",
                      family = "Chudzicki",
                      role = "aut"),
               person(given = "Dallin",
                      family = "Akagi",
                      role = "aut"),
               person(given = "Sergey",
                      family = "Yurgenson",
                      role = "aut"),
               person(given = c("Thakur", "Raj"),
                      family = "Anand",
                      role = "aut"),
               person(given = "Peter",
                      family = "Hurford",
                      role = "aut"),
               person(given = "Chester",
                      family = "Ismay",
                      role = "aut"),
               person(given = "AJ",
                      family = "Alon",
                      role = c("aut", "cre"),
                      email = "api-maintainer@datarobot.com"),
               person(given = "Andrew",
                      family = "Watson",
                      role = "aut"),
               person(given = "Gregory",
                      family = "Williams",
                      role = "aut"),
               person(given = "Anastasiia",
                      family = "Tamazlykar",
                      role = "ctb"),
               person(given = "Mykhailo",
                      family = "Poliakov",
                      role = "ctb"),
               person(family = "DataRobot"),
               person(family = "Inc.",
                      role = "cph"))
as necessary.
Maintainer: ‘Christoph Sax <christoph.sax@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christoph",
                    family = "Sax",
                    role = c("aut", "cre"),
                    email = "christoph.sax@gmail.com")
as necessary.

The BugReports field in DESCRIPTION has
  https://github.com/christophsax/dataseries
which should likely be
  https://github.com/christophsax/dataseries/issues
instead.
Maintainer: ‘Paolo Giordani <paolo.giordani@uniroma1.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paolo",
                      family = "Giordani",
                      role = c("aut", "cre"),
                      email = "paolo.giordani@uniroma1.it"),
               person(given = c("Maria", "Brigida"),
                      family = "Ferraro",
                      role = "aut"),
               person(given = "Francesca",
                      family = "Martella",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
Jeffreys 7.828  0.234   9.712
C2ST     4.169  0.127   5.863
Maintainer: ‘Svetlana Saarela <admin@svetlanasaarela.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Svetlana",
                      family = "Saarela",
                      role = c("aut", "cre"),
                      email = "admin@svetlanasaarela.com"),
               person(given = "Anton",
                      family = "Grafström",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘datassim.Rd’:
    https://doi.org/10.20944/preprints201710.0098.v1
Maintainer: ‘Brandon Taylor <brandon.taylor221@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Brandon",
                    family = "Taylor",
                    role = c("aut", "cre"),
                    email = "brandon.taylor221@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dataStepClass.Rd: R6Class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
File ‘data.table/libs/data_table.so’:
  Found non-API calls to R: ‘LEVELS’, ‘OBJECT’, ‘Rf_GetOption’,
    ‘Rf_isFrame’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’, ‘SET_TRUELENGTH’,
    ‘TRUELENGTH’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Node.Rd: R6Class
  as.Node.rpart.Rd: rpart, text.rpart
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
adjust 7.894  0.398  10.018
Maintainer: ‘Ryota Suzuki <suzuki@ef-prime.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ryota",
                    family = "Suzuki",
                    role = c("aut", "cre"),
                    email = "suzuki@ef-prime.com")
as necessary.
Maintainer: ‘Tim Bergsma <bergsmat@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tim",
                    family = "Bergsma",
                    role = c("aut", "cre"),
                    email = "bergsmat@gmail.com")
as necessary.
Maintainer: ‘Chris Hartgerink <chris@libscie.org>’

Found the following (possibly) invalid file URI:
  URI: CODE_OF_CONDUCT.md
    From: README.md
Maintainer: ‘Robin K. S. Hankin <hankin.robin@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Robin", "K.", "S."),
                    family = "Hankin",
                    role = c("aut", "cre"),
                    email = "hankin.robin@gmail.com")
as necessary.

Package has help file(s) containing later-stage \Sexpr{} expressions
but no 'build/stage23.rdb' file.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
err.est.rqda 10.202  0.003  12.757
err.est.rlda  9.844  0.048  11.501
predict.rqda  6.826  0.000   8.492
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dbcsp-class.Rd: TSDatabaseDistances, parallelDist
  predict.dbcsp.Rd: predict.lda
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
dbcsp-package 5.523  0.501   6.313
predict.dbcsp 5.136  0.550   6.408
train.dbcsp   4.915  0.550   5.950
Maintainer: ‘Rolf Turner <r.turner@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rolf",
                    family = "Turner",
                    role = c("aut", "cre"),
                    email = "r.turner@auckland.ac.nz")
as necessary.
checkRd: (-1) plot.mleBb.Rd:48: Lost braces
    48 |   \ code{size} is extracted from argument \code{x}.
       |         ^
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
mcCovMat 6.545  0.007   9.500
visRecog 4.987  0.012   6.218
Maintainer: ‘Hristo Tomov <tomov.hristo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sadegh",
                      family = "Jamali",
                      role = "aut"),
               person(given = "Hristo",
                      family = "Tomov",
                      role = c("aut", "cre"),
                      email = "tomov.hristo@gmail.com"))
as necessary.

File 'R/DBEST-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Shaofeng Zhang <shaofeng.zhang@wmich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Joseph", "W."),
                      family = "McKean",
                      role = "aut"),
               person(given = "Shaofeng",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "shaofeng.zhang@wmich.edu"))
as necessary.
checkRd: (-1) value_missing_table.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) value_missing_table.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Gabriel Budel <gabysp_budel@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gabriel",
                      family = "Budel",
                      role = c("aut", "cre"),
                      email = "gabysp_budel@hotmail.com"),
               person(given = "Flavius",
                      family = "Frasincar",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
merge         5.885  0.134  10.505
as.data.frame 2.023  0.118   5.029
Maintainer: ‘Nailong Zhang <setseed2016@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nailong",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "setseed2016@gmail.com")
as necessary.
Maintainer: ‘The Tien Mai <t.t.mai@medisin.uio.no>’

The Description field contains
  <arXiv:2103.11749>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) CI_mc.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{i}{the row index of the interest entry X_{i,j}}
       |                                                ^
checkRd: (-1) CI_mc.Rd:12: Lost braces; missing escapes or markup?
    12 | \item{j}{the row index of the interest entry X_{i,j}}
       |                                                ^
Maintainer: ‘Scott H. Koeneman <Scott.Koeneman@jefferson.edu>’

The Description field contains
  more information, see Koeneman and Cavanaugh (2023) <arXiv:2309.10614>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
BootGOFTestLM 11.061      0  13.707
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
autoplot 3.612   0.04   5.504
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  arrange.tbl_lazy.Rd: arrange, show_query
  backend-hana.Rd: copy_to
  collapse.tbl_sql.Rd: collapse, compute, collect
  complete.tbl_lazy.Rd: show_query
  copy_inline.Rd: copy_to
  copy_to.src_sql.Rd: copy_to, show_query
  count.tbl_lazy.Rd: count, tally
  db-sql.Rd: copy_to
  dbplyr-slice.Rd: slice_min, slice_max, slice_sample
  distinct.tbl_lazy.Rd: distinct, show_query
  expand.tbl_lazy.Rd: show_query
  filter.tbl_lazy.Rd: show_query
  get_returned_rows.Rd: rows_insert, rows_append, rows_update,
    rows_upsert, rows_delete
  group_by.tbl_lazy.Rd: group_by
  head.tbl_lazy.Rd: show_query
  join.tbl_sql.Rd: join, show_query
  memdb_frame.Rd: !!, !!!, .data, .env
  mutate.tbl_lazy.Rd: mutate, transmute, show_query
  nycflights13.Rd: src_postgres
  pivot_wider.tbl_lazy.Rd: expand
  pull.tbl_sql.Rd: pull
  replace_na.tbl_lazy.Rd: show_query
  rows-db.Rd: rows_insert, rows_append, rows_update, rows_patch,
    rows_upsert, rows_delete, tbl, compute
  select.tbl_lazy.Rd: select, rename, relocate
  summarise.tbl_lazy.Rd: summarise, show_query
  tbl.src_dbi.Rd: compute, collect, show_query, explain, do
  win_over.Rd: group_by, arrange
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
dbr 3.985  0.028   5.028
Maintainer: ‘Eva Boj <evaboj@ub.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(family = "Boj",
                      role = "aut"),
               person(family = "Eva",
                      role = c("aut", "cre"),
                      email = "evaboj@ub.edu"),
               person(family = "Caballe",
                      role = "aut"),
               person(family = "Adria",
                      role = "aut",
                      email = "adria.caballe@irb.barcelona.org"),
               person(family = "Delicado",
                      role = "aut"),
               person(family = "Pedro",
                      role = "aut",
                      email = "pedro.delicado@upc.edu"),
               person(family = "Fortiana",
                      role = "aut"),
               person(family = "Josep.",
                      role = "aut",
                      email = "fortiana@ub.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dbglm.Rd: daisy
  dblm.Rd: daisy
  dbplsr.Rd: plsr, daisy
  disttoD2.rd: daisy
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
ldbglm 4.196  0.148   7.138
Maintainer: ‘Timothy Conwell <timconwell@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Timothy",
                    family = "Conwell",
                    role = c("aut", "cre"),
                    email = "timconwell@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
dbw 3.903  0.049   5.269
Maintainer: ‘Gokmen Altay <altaylabs@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gokmen",
                    family = "Altay",
                    role = c("aut", "cre"),
                    email = "altaylabs@gmail.com")
as necessary.
Maintainer: ‘Taiane Schaedler Prass <taianeprass@gmail.com>’

The Description field contains
  <arXiv:1910.10589>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Jonathan Berrisch <Jonathan@Berrisch.biz>’

The Description field contains
  distance correlation (see Chaudhuri, Hu (2019) <arXiv:1810.11332>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) data.Rd:11: Lost braces
    11 | \doi{10.1007/s40258-021-00647-3}{DOI}
       |                                 ^
Maintainer: ‘Sharma Parichit <parishar@iu.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
ibdDat 6.665  0.014    8.66
Maintainer: ‘Peter Solymos <psolymos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Solymos",
                    role = c("aut", "cre"),
                    email = "psolymos@gmail.com",
                    comment = c(ORCID = "0000-0001-7337-1740"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dcoptions.Rd: gelman.diag
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Maria Dolores Martinez-Miranda <mmiranda@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Maria", "Dolores"),
                      family = "Martinez-Miranda",
                      role = c("aut", "cre"),
                      email = "mmiranda@ugr.es"),
               person(given = c("Jens", "Perch"),
                      family = "Nielsen",
                      role = "aut"),
               person(given = "Richard",
                      family = "Verrall",
                      role = "aut"))
as necessary.
Maintainer: ‘Virgilio Gomez-Rubio <virgilio.gomez@uclm.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Virgilio",
                      family = "Gomez-Rubio",
                      role = c("aut", "cre"),
                      email = "virgilio.gomez@uclm.es"),
               person(given = c("Paula", "Esther", "Moraga"),
                      family = "Serrano",
                      role = "aut"),
               person(given = "Barry",
                      family = "Rowlingson",
                      role = "aut"))
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘DetectClustersModel.Rd’:
    http://dx.doi.org/10.1007/s10260-013-0241-8
checkRd: (-1) CalcStatClusterGivenCenter.Rd:36: Lost braces; missing escapes or markup?
    36 | This can be "glm" for generalized linear models (\link{glm} {stats}),
       |                                                             ^
checkRd: (-1) CalcStatClusterGivenCenter.Rd:37: Lost braces; missing escapes or markup?
    37 | "glmer" for generalized linear mixed model (\link{glmer} {lme4}),
       |                                                          ^
checkRd: (-1) CalcStatsAllClusters.Rd:49: Lost braces; missing escapes or markup?
    49 | This can be "glm" for generalized linear models (\link{glm} {stats}),
       |                                                             ^
checkRd: (-1) CalcStatsAllClusters.Rd:50: Lost braces; missing escapes or markup?
    50 | "glmer" for generalized linear mixed model (\link{glmer} {lme4}),
       |                                                          ^
checkRd: (-1) DetectClustersModel.Rd:60: Lost braces; missing escapes or markup?
    60 | This can be "glm" for generalized linear models (\link{glm} {stats}),
       |                                                             ^
checkRd: (-1) DetectClustersModel.Rd:61: Lost braces; missing escapes or markup?
    61 | "glmer" for generalized linear mixed model (\link{glmer} {lme4}),
       |                                                          ^
checkRd: (-1) glmAndZIP.iscluster.Rd:34: Lost braces; missing escapes or markup?
    34 | This can be "glm" for generalized linear models (\link{glm} {stats}),
       |                                                             ^
checkRd: (-1) glmAndZIP.iscluster.Rd:35: Lost braces; missing escapes or markup?
    35 | "glmer" for generalized linear mixed model (\link{glmer} {lme4}),
       |                                                          ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CalcStatClusterGivenCenter.Rd: glmer
  CalcStatsAllClusters.Rd: glmer
  DetectClustersModel.Rd: glmer, SpatialPolygonsDataFrame, STFDF,
    SpatialPolygons
  glmAndZIP.iscluster.Rd: glmer
  knbinary.Rd: SpatialPolygonsDataFrame
  mergeknclusters.Rd: SpatialPolygonsDataFrame
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
get.stclusters      7.229  0.017  11.040
DetectClustersModel 5.153  0.050   6.218
Maintainer: ‘Virgilio Gómez-Rubio <Virgilio.Gomez@uclm.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Virgilio",
                      family = "Gómez-Rubio",
                      role = c("aut", "cre"),
                      email = "virgilio.gomez@uclm.es"),
               person(given = "Juan",
                      family = "Ferrándiz-Ferragud",
                      role = "aut"),
               person(given = "Antonio",
                      family = "López-Quílez",
                      role = "aut"),
               person(given = c("with", "contributions", "by", "Roger"),
                      family = "Bivand.",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
sp2WB 11.422  0.438  17.317
Maintainer: ‘Peter Solymos <psolymos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Solymos",
                    role = c("aut", "cre"),
                    email = "psolymos@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dcFit-class.Rd: bugs.fit
  gsFit-class.Rd: bugs.fit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Sophie Lebre <sophie.lebre@umontpellier.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sophie",
                    family = "Lebre",
                    role = c("aut", "cre"),
                    email = "sophie.lebre@umontpellier.fr")
as necessary.

File 'R/DCODE-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.

The Description field contains
  http://arxiv.org/abs/1602.04971).
Please enclose URLs in angle brackets (<...>).
The Description field contains
  http://arxiv.org/abs/1602.04971).
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Dominic Edelmann <dominic.edelmann@dkfz-heidelberg.de>’

The Description field contains
  <arXiv:1808.07280>. Distance standard deviation methods (Edelmann, et
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Maintainer: ‘Hang Weiqiang <e0010758@u.nus.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hang",
                    family = "Weiqiang",
                    role = c("aut", "cre"),
                    email = "e0010758@u.nus.edu")
as necessary.
Specified C++11: please drop specification unless essential
checkRd: (-1) kernel.assign.Rd:27: Lost braces; missing escapes or markup?
    27 |  {q = [0, 1]}. Kernels are of the Müller-Wang type ("MW"), Müller type ("M")
       |  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dNTD.Rd: plotTensor3D
  dNTF.Rd: plotTensor3D
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Cesar Gamboa <info@cesargamboasanabria.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cesar",
                      family = "Gamboa-Sanabria",
                      role = c("aut", "mdc", "cph", "cre"),
                      comment = c(ORCID = "0000-0001-6733-4759")),
               person(given = "Stefani",
                      family = "Matarrita-Munoz",
                      role = "aut",
                      comment = c(ORCID = "0000-0002-1222-1981")),
               person(given = "Katherine",
                      family = "Barquero-Mejias",
                      role = "aut",
                      comment = c(ORCID = "0000-0003-1760-9026")),
               person(given = "Greibin",
                      family = "Villegas-Barahona",
                      role = "aut",
                      comment = c(ORCID = "0000-0002-4380-0812")),
               person(given = "Mercedes",
                      family = "Sanchez-Barba",
                      role = "aqt",
                      comment = c(ORCID = "0000-0002-3324-5798")),
               person(given = c("Maria", "Purificacion"),
                      family = "Galindo-Villardon",
                      role = "aqt",
                      comment = c(ORCID = "0000-0001-6977-7545")),
               person(given = "Cesar",
                      family = "Gamboa",
                      role = "cre",
                      email = "info@cesargamboasanabria.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  CUR.Rd: pcor, spcor
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Oğuzhan Öğreden <oguzhan@oguzhanogreden.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Oğuzhan",
                    family = "Öğreden",
                    role = c("aut", "cre"),
                    email = "oguzhan@oguzhanogreden.com")
as necessary.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
dca                      4.935  0.177   7.290
net_intervention_avoided 3.636  0.012   5.573
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
cdda.indep 2.061  0.272   8.151
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
ob_decompose       7.058  0.267  10.326
plot.dfl_decompose 3.755  0.182   6.024
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
IVExtractResult 6.599  0.085  10.317
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

The Description field contains
  Debiased Lasso method was proposed in <arXiv:2004.03758>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
DDL 4.69  0.296   6.512
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
ddml_late 3.87  0.083   5.706
Maintainer: ‘Tim Riffe <riffe@demogr.mpg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Tim",
                      family = "Riffe",
                      role = c("aut", "cre"),
                      email = "riffe@demogr.mpg.de"),
               person(given = "Everton",
                      family = "Lima",
                      role = "aut"),
               person(given = "Bernardo",
                      family = "Queiroz",
                      role = "aut"))
as necessary.
checkRd: (-1) detectAgeInterval.Rd:10: Lost braces
    10 | \item{Dat}{a \code{data.frame} containing a column called \code{Age}, or code{age}.}
       |                                                                              ^
checkRd: (-1) detectSex.Rd:10: Lost braces
    10 | \item{Dat}{a \code{data.frame} containing a column called \code{Sex}, or code{sex}.}
       |                                                                              ^
checkRd: (-1) ggbgetAgesFit.Rd:28: Lost braces
    28 | code{\link{ggbChooseAges}}
       |     ^
Maintainer: ‘Fan Yang <fyang1@uchicago.edu>’

The Description field contains
  <arXiv:1906.00051>) by decomposing a large covariance matrix into a
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
DDPCA_convex 8.014      0   11.51
checkRd: (-1) plot.ddpcr_plate.Rd:136-137: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ddpcr_plate.Rd:138-139: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.ddpcr_plate.Rd:140-141: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
get_filled_border 3.399  0.169   5.602
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
getmoduleHub 3.675  0.089   5.481
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
predict.DDPstar    4.309  0.453   5.252
quantile.residuals 4.508  0.023   5.531
Maintainer: ‘Xiaojie Qiu <xqiu@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Xiaojie",
                      family = "Qiu",
                      role = c("aut", "cre"),
                      email = "xqiu@uw.edu"),
               person(given = "Cole",
                      family = "Trapnell",
                      role = "aut"),
               person(given = "Qi",
                      family = "Mao",
                      role = "aut"),
               person(given = "Li",
                      family = "Wang",
                      role = "aut"))
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Hadrien Lorenzo <hadrien.lorenzo.2015@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hadrien",
                    family = "Lorenzo",
                    role = c("aut", "cre"),
                    email = "hadrien.lorenzo.2015@gmail.com")
as necessary.
Maintainer: ‘Przemyslaw Biecek <przemyslaw.biecek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Przemyslaw",
                      family = "Biecek",
                      role = c("aut", "cre"),
                      email = "przemyslaw.biecek@gmail.com",
                      comment = "R code"),
               person(given = "Teresa",
                      family = "Ledwina",
                      role = "aut",
                      comment = "support,\n    descriptions"))
as necessary.
Maintainer: ‘Mengbing Li <mengbing@umich.edu>’

The Description field contains
  <arXiv:2306.04700>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
ddtlcm_fit             10.952  0.103  14.025
plot.summary.ddt_lcm    8.615  0.097  11.522
compute_IC              6.533  0.198   8.101
plot_tree_with_barplot  4.464  0.095   5.823
Maintainer: ‘Nunzio Torrisi <nunzio.torrisi@ieee.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nunzio",
                    family = "Torrisi",
                    role = c("aut", "cre"),
                    email = "nunzio.torrisi@ieee.org")
as necessary.
Maintainer: ‘Claus Dethlefsen <rpackage.deal@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Susanne", "Gammelgaard"),
                      family = "Bottcher",
                      role = "aut"),
               person(given = "Claus",
                      family = "Dethlefsen.",
                      role = "aut"),
               person(given = "Claus",
                      family = "Dethlefsen",
                      role = "cre",
                      email = "rpackage.deal@gmail.com"))
as necessary.
Maintainer: ‘Vicente Bolos <vicente.bolos@uv.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Vicente",
                      family = "Coll-Serrano",
                      role = "aut"),
               person(given = "Vicente",
                      family = "Bolos",
                      role = c("aut", "cre"),
                      email = "vicente.bolos@uv.es"),
               person(given = c("Rafael", "Benitez"),
                      family = "Suarez",
                      role = "aut",
                      email = "rabesua@uv.es"))
as necessary.
Maintainer: ‘Cameron M. Nugent <camnugent@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Cameron", "M."),
                    family = "Nugent",
                    role = c("aut", "cre"),
                    email = "camnugent@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
consensus    8.599  0.027  13.763
denoise_list 8.135  0.040  12.339
denoise      5.309  0.049   8.152
Maintainer: ‘Brendan Matthew Galdo <Brendan.m.galdo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/bmgaldo/DEBBI
which should likely be
  https://github.com/bmgaldo/DEBBI/issues
instead.
Maintainer: ‘Hong Zhang <hzhang@wpi.edu>’

The Description field contains
  <arXiv:2401.00540>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
calcDuration 9.896  0.272  12.656
Maintainer: ‘Yikun Zhang <yikunzhang@foxmail.com>’

The Description field contains
  Giessing, and Chen (2023) <arXiv:2309.06429>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Philipp H Boersch-Supan <pboesu@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++14: please drop specification unless essential
Maintainer: ‘Christiana Kartsonaki <christiana.kartsonaki@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christiana",
                    family = "Kartsonaki",
                    role = c("aut", "cre"),
                    email = "christiana.kartsonaki@gmail.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Partha Sarathi Bishnu <psbishnu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Partha", "Sarathi"),
                    family = "Bishnu",
                    role = c("aut", "cre"),
                    email = "psbishnu@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  plot_cashflow.Rd: ggplot2
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  declare_estimator.Rd: lm_robust, estimatr, glance
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
diagnose_design   12.993  0.149  15.865
compare_diagnoses  4.185  0.098   5.306
Maintainer: ‘Neeraj Bokde <neerajdhanraj@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Neeraj",
                    family = "Bokde",
                    role = c("aut", "cre"),
                    email = "neerajdhanraj@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Sebastien Wouters <wouterseb@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sebastien",
                    family = "Wouters",
                    role = c("aut", "cre"),
                    email = "wouterseb@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  inst.ratio.Rd: pdfDisplay
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
mode.in    3.649  0.020   5.881
plot_hex   3.468  0.039   5.447
plot_ratio 3.430  0.024   5.395
checkRd: (-1) deconv.Rd:85: Lost braces; missing escapes or markup?
    85 |     \code{tg}, std. error of \eqn{g}, \eqn{G} (the cdf of {g}),
       |                                                           ^
Maintainer: ‘Matthias Bogaert <Matthias.Bogaert@UGent.Be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthias",
                    family = "Bogaert",
                    role = c("aut", "cre"),
                    email = "matthias.bogaert@ugent.be")
as necessary.
Maintainer: ‘Ian Fellows <ian@fellstat.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ian", "Fellows", "with", "contributions", "from"),
                      family = "others.",
                      role = "aut",
                      comment = "see documentation"),
               person(given = "Ian",
                      family = "Fellows",
                      role = "cre",
                      email = "ian@fellstat.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  recode.variables.Rd: recode
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Mark van der Loo <mark.vanderloo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mark",
                      family = "van der Loo",
                      role = c("aut", "cre"),
                      email = "mark.vanderloo@gmail.com"),
               person(given = "Edwin",
                      family = "de Jonge",
                      role = "aut"),
               person(given = "Sander",
                      family = "Scholtus",
                      role = "aut"))
as necessary.
Maintainer: ‘Rajesh Balakirshnan <rajeshbalakrishnan24@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Rajesh",
                      family = "Balakrishnan",
                      role = "aut"),
               person(given = "Rajesh",
                      family = "Balakirshnan",
                      role = "cre",
                      email = "rajeshbalakrishnan24@gmail.com"))
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  deepforest.Rd: rpart.control
  deeptree.Rd: rpart.control
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Suren Rathnayake <surenr@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cinzia",
                      family = "Viroli",
                      role = "aut"),
               person(given = c("Geoffrey", "J."),
                      family = "McLachlan",
                      role = "aut"),
               person(given = "Suren",
                      family = "Rathnayake",
                      role = "cre",
                      email = "surenr@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
metalearner_ensemble 4.414  0.226   6.267
Maintainer: ‘Xiao Rong <runxiao@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xiao",
                    family = "Rong",
                    role = c("aut", "cre"),
                    email = "runxiao@gmail.com")
as necessary.
checkRd: (-1) deepNN-package.Rd:18: Lost braces
    18 | section{Dependencies}{
       |        ^
checkRd: (-1) deepNN-package.Rd:18-21: Lost braces
    18 | section{Dependencies}{
       |                      ^
checkRd: (-1) deepNN-package.Rd:23: Lost braces
    23 | section{Citation}{
       |        ^
checkRd: (-1) deepNN-package.Rd:23-25: Lost braces
    23 | section{Citation}{
       |                  ^
checkRd: (-1) deepNN-package.Rd:27-38: Lost braces
    27 | references{
       |           ^
Maintainer: ‘Brian <bleemayer@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Brian", "Lee"),
                      family = "Mayer",
                      role = "aut"),
               person(family = "Brian",
                      role = "cre",
                      email = "bleemayer@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
coord_geo_polar 4.902  0.280   6.137
gggeo_scale     5.031  0.014   6.462
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘deeptrafo.Rd’ ‘ensembles.R’ ‘methods.R’
Maintainer: ‘Javaria Ahmad Khan <jakhan0@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javaria", "Ahmad"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "jakhan0@yahoo.com"),
               person(given = "Atif",
                      family = "Akbar.",
                      role = "aut"))
as necessary.
Maintainer: ‘Nick Golding <nick.golding.research@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Nick",
                    family = "Golding",
                    role = c("aut", "cre"),
                    email = "nick.golding.research@gmail.com")
as necessary.
Maintainer: ‘Toshihiro Umehara <toshi@niceume.com>’

The BugReports field in DESCRIPTION has
  https://github.com/niceume/defineOptions
which should likely be
  https://github.com/niceume/defineOptions/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘defineOptions-package.Rd’ ‘define_option.Rd’ ‘parse_with_defs.Rd’
    ‘summary.parsed_result.Rd’
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
defit 6.462   0.05   8.962
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
classify 3.029  0.264   5.334
Specified C++11: please drop specification unless essential
Maintainer: ‘Philippe Lambert <p.lambert@uliege.be>’

The Description field contains
  (2021) <arXiv:2107.03883> for details.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘api.R’ ‘category_blur.R’ ‘deident.R’
Maintainer: ‘Bill Wheeler <wheelerb@imsweb.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhenzhen",
                      family = "Xu",
                      role = "aut",
                      email = "Zhenzhen.Xu@fda.hhs.gov"),
               person(given = "Boguang",
                      family = "Zhen",
                      role = "aut",
                      email = "Boguang.Zhen@fda.hhs.gov"),
               person(given = "Yongsoek",
                      family = "Park",
                      role = "aut",
                      email = "yongpark@pitt.edu"),
               person(given = "Bin",
                      family = "Zhu",
                      role = "aut",
                      email = "bin.zhu@nih.gov"),
               person(given = "Bill",
                      family = "Wheeler",
                      role = "cre",
                      email = "wheelerb@imsweb.com"))
as necessary.
Maintainer: ‘Rolf Turner <rolfturner@posteo.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Rolf",
                    family = "Turner",
                    role = c("aut", "cre"),
                    email = "rolfturner@posteo.net")
as necessary.
Maintainer: ‘David Magis <david.magis@ulg.ac.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Magis",
                      role = c("aut", "cre"),
                      email = "david.magis@ulg.ac.be",
                      comment = "U Liege"),
               person(given = "Bruno",
                      family = "Facon",
                      role = "aut",
                      comment = "Univ Lille-Nord de France"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) deltaPlot.Rd:28: Lost braces
    28 |  \item{purify}{logical: should item purification be performed? (Default is code{FALSE}). See \bold{Details}.}
       |                                                                                ^
Found the following files/directories:
  ‘res.pdf’ ‘res1.jpg’
Maintainer: ‘Javaria Ahmad Khan <jakhan0@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Javaria", "Ahmad"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "jakhan0@yahoo.com"),
               person(given = "Atif",
                      family = "Akbar.",
                      role = "aut"))
as necessary.
Maintainer: ‘Terry Therneau <therneau.terry@mayo.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Terry",
                    family = "Therneau",
                    role = c("aut", "cre"),
                    email = "therneau.terry@mayo.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Caswell.R’
Found the following files/directories:
  ‘smd_table.docx’
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
tfr            5.032  0.001   5.423
forecast.fdmpr 4.532  0.047   5.442
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("James", "Holland"),
                      family = "Jones",
                      role = "aut",
                      email = "jhj1@stanford.edu"),
               person(given = "Jim",
                      family = "Oeppen",
                      role = "ctb"),
               person(given = "Hana",
                      family = "Sevcikova",
                      role = "cre",
                      email = "hanas@uw.edu"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Bill Venables <Bill.Venables@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Bill",
                    family = "Venables",
                    role = c("aut", "cre"),
                    email = "bill.venables@gmail.com")
as necessary.
checkRd: (-1) kin.Rd:49-50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:51-52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:53-61: Lost braces
    53 | {\itemize{
       | ^
checkRd: (-1) kin.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:56-57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:59-67: Lost braces
    59 | {\itemize{
       | ^
checkRd: (-1) kin2sex.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) kin2sex.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Vinca Prana <vinca.prana@free.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Vinca",
                    family = "Prana",
                    role = c("aut", "cre"),
                    email = "vinca.prana@free.fr")
as necessary.
checkRd: (-1) scramb.Rd:44: Escaped LaTeX specials: \&
Maintainer: ‘Matthew T. Pratola <mpratola@stat.osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Matthew", "T."),
                    family = "Pratola",
                    role = c("aut", "cre", "cph"),
                    email = "mpratola@stat.osu.edu")
as necessary.

The Description field contains
  <arXiv:1804.02089> for Gaussian process regression models.  See
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  sim.dpp.modal.fast.Rd: spam
  sim.dpp.modal.fast.seq.Rd: spam
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
clique_community_names 3.765  0.289   5.185
Maintainer: ‘Josu G. Alday <josucham@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josu", "G."),
                      family = "Alday",
                      role = c("aut", "cre"),
                      email = "josucham@gmail.com",
                      comment = c(ORCID = "0000-0001-7510-8655")),
               person(given = c("Tatiana", "A."),
                      family = "Shestakova",
                      role = "aut",
                      comment = c(ORCID = "0000-0002-5605-0299")),
               person(given = c("Victor", "Resco"),
                      family = "de Dios",
                      role = "aut",
                      comment = c(ORCID = "0000-0002-5721-1656")),
               person(given = "Jordi",
                      family = "Voltas",
                      role = "aut",
                      comment = c(ORCID = "0000-0003-4051-1158")))
as necessary.
checkRd: (-1) conifersIP.Rd:9: Lost braces; missing escapes or markup?
     9 | \code{conifersIP} {has following variables:}
       |                   ^
checkRd: (-1) conifersIP.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) conifersIP.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) conifersIP.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) conifersIP.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) conifersIP.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) sync.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) sync.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dendro.varcov.Rd: varFunc, varIdent, lmeObject
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
dendro.varcov 4.812  0.000   6.941
sync          4.535  0.008   6.258
mod.table     3.679  0.055   5.156
gen.het.aSE   3.568  0.000   5.530
het.var       3.564  0.003   5.249
Maintainer: ‘Jernej Jevsenak <jernej.jevsenak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jernej",
                    family = "Jevsenak",
                    role = c("aut", "cre"),
                    email = "jernej.jevsenak@gmail.com")
as necessary.
Maintainer: ‘Catherine Hurley <catherine.hurley@mu.ie>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Catherine", "B."),
                      family = "Hurley",
                      role = "aut"),
               person(given = "Denise",
                      family = "Earle",
                      role = "aut"),
               person(given = "Catherine",
                      family = "Hurley",
                      role = "cre",
                      email = "catherine.hurley@mu.ie"))
as necessary.
checkRd: (-1) DendSer.Rd:50: Escaped LaTeX specials: \&
'library' or 'require' calls not declared from:
  ‘HSAUR2’ ‘Iyer517’ ‘PairViz’ ‘RColorBrewer’ ‘mvtnorm’ ‘scagnostics’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘convert_slwer_to_tidy.R’ ‘download_pdfwer_srilanka.R’
    ‘get_pdflinks_srilanka.R’ ‘min_max.R’
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
tunedStepSize 3.54  0.003   5.029
Maintainer: ‘Julie Josse <julie.josserennes@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Julie",
                      family = "Josse",
                      role = c("aut", "cre"),
                      email = "julie.josserennes@gmail.com"),
               person(given = "Sylvain",
                      family = "Sardy",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Wager",
                      role = "aut"))
as necessary.

The Description field contains
  completion. The method is described in <arXiv:1602.01206>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  estim_sigma.Rd: estim_ncp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘James Ware <j.ware@imperial.ac.uk>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘fmrpGenes.Rd’:
    http://dx.doi.org/10.1016/j.cell.2011.06.013
Maintainer: ‘Matt P. Wand <matt.wand@uts.edu.au>’

The Description field contains
  methodology is described in Wand and Yu (2020) <arXiv:2009.06182>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
incomeUK 4.216  0.042   5.223
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  density_polygons.Rd: sf
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
density_polygons 5.38  0.074    6.56
Maintainer: ‘Yikai Wang <johnzon.wyk@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yikai",
                      family = "Wang",
                      role = c("aut", "cre"),
                      email = "johnzon.wyk@gmail.com"),
               person(given = "Jian",
                      family = "Kang",
                      role = "aut"),
               person(given = c("Phebe", "Brenne"),
                      family = "Kemmer",
                      role = "aut"),
               person(given = "Ying",
                      family = "Guo",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
densratio 4.045  0.024   5.554
Maintainer: ‘Carl A. B. Pearson <carl.pearson@lshtm.ac.uk>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘denvax.Rd’:
    https://doi.org/10.1098/rsif.2019.0234
  File ‘lazou2016.Rd’:
    https://doi.org/10.1056/NEJMoa1503877
  File ‘morrison2010.Rd’:
    https://doi.org/10.1371/journal.pntd.0000670
  File ‘nPxA.Rd’:
    https://doi.org/10.1098/rsif.2019.0234
Maintainer: ‘Katharine Mullen <mullenkate@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Eckhard Liebscher <eckhard.liebscher@hs-merseburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Eckhard",
                    family = "Liebscher",
                    role = c("aut", "cre"),
                    email = "eckhard.liebscher@hs-merseburg.de")
as necessary.
Maintainer: ‘Takeshi Emura <takeshiemura@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Takeshi",
                    family = "Emura",
                    role = c("aut", "cre"),
                    email = "takeshiemura@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  start_bot_for_chat.Rd: telegram.bot
  use_ui.Rd: ui_line, ui_todo, ui_done, ui_oops, ui_info,
    ui_code_block, ui_stop, ui_warn, ui_yeah, ui_nope, ui_field,
    ui_value, ui_path, ui_code
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
subBoxes    6.466  0.004   7.108
subLines    6.078  0.004   8.327
plotDeplogo 5.679  0.015   6.991
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
reexports 4.87  0.033   6.737
Maintainer: ‘Ingmar Visser <i.visser@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ingmar",
                      family = "Visser",
                      role = c("aut", "cre"),
                      email = "i.visser@uva.nl"),
               person(given = "Maarten",
                      family = "Speekenbrink",
                      role = "aut",
                      email = "m.speekenbrink@ucl.ac.uk"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) responses.Rd:68: Lost braces
    68 |         response.  See code{\link{makeDepmix}} for an example of how to use
       |                            ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  depmix.fit.Rd: solnp
  response-classes.Rd: nnet
  vcov.Rd: nlme
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
multistart 4.291      0   5.744
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plot.depower 5.425  0.154    6.93
Maintainer: ‘Zygmunt Zawadzki <zygmunt@zstat.pl>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Maintainer: ‘Aurora Torrente <etorrent@est-econ.uc3m.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Sara",
                      family = "Lopez-Pintado",
                      role = "aut",
                      email = "sl2929@columbia.edu"),
               person(given = "Aurora",
                      family = "Torrente.",
                      role = "aut",
                      email = "etorrent@est-econ.uc3m.es"),
               person(given = "Aurora",
                      family = "Torrente",
                      role = "cre",
                      email = "etorrent@est-econ.uc3m.es"))
as necessary.
Maintainer: ‘Oleksandr Castello <alexander-castello@libero.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Oleksandr",
                    family = "Castello",
                    role = c("ctb", "cre", "aut"),
                    email = "alexander-castello@libero.it")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
DRF.5F.rates 5.472  0.077   6.663
DRF.5F.tVar  5.154  0.025   6.317
checkRd: (-1) barriers.Rd:127: Escaped LaTeX specials: \$
Maintainer: ‘Francisco Parra  <parra_fj@cantabria.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Francisco",
                    family = "Parra",
                    role = c("aut", "cre"),
                    email = "parra_fj@cantabria.es")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
ggplot.scatmat 4.121  0.070   6.696
ggplot.dd      3.101  0.023   5.071
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
ggassoc_bertin 4.211  0.003    5.83
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
ds_plot_scatter 5.077  0.008   6.078
Maintainer: ‘Jakson Aquino <jalvesaq@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jakson", "Aquino.", "Includes", "R", "source", "code", "and/or", "documentation", "written", "by", "Dirk"),
                      family = "Enzmann",
                      role = "aut"),
               person(given = "Marc",
                      family = "Schwartz",
                      role = "aut"),
               person(given = "Nitin",
                      family = "Jain",
                      role = "aut"),
               person(given = "Stefan",
                      family = "Kraft",
                      role = "aut"),
               person(given = "Jakson",
                      family = "Aquino",
                      role = "cre",
                      email = "jalvesaq@gmail.com"))
as necessary.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  ‘.N’ ‘.Nmiss’ ‘.Q1’ ‘.Q3’ ‘.factorN’ ‘.factorNmiss’ ‘.factorQ1’
  ‘.factorQ3’ ‘.factormax’ ‘.factormean’ ‘.factormedian’ ‘.factormin’
  ‘.factorsd’ ‘.max’ ‘.mean’ ‘.median’ ‘.min’ ‘.sd’
Maintainer: ‘Harish Kumar <kadamatiharish@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Harish",
                    family = "Kumar",
                    role = c("aut", "cre"),
                    email = "kadamatiharish@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  pander.desctable.Rd: pandoc.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
Desc 3.945  0.037   5.253
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mod_template_srv.R’
Examples with CPU (user + system) or elapsed time > 5s
                                user system elapsed
mk_swapping_function           8.756  0.442   4.142
complete_random_shuffling      8.608  0.525   3.885
shuffle_with_constraints       8.252  0.419   4.093
optimize_design                7.704  0.273   3.103
mk_subgroup_shuffling_function 7.491  0.210   5.196
Examples with CPU time > 2.5 times elapsed time
                 user system elapsed ratio
optimize_design 7.704  0.273   3.103 2.571
Maintainer: ‘Jose R. Zubizarreta <zubizarreta@hcp.med.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Jose", "R."),
                      family = "Zubizarreta",
                      role = c("aut", "cre"),
                      email = "zubizarreta@hcp.med.harvard.edu"),
               person(given = "Cinar",
                      family = "Kilcioglu",
                      role = "aut",
                      email = "ckilcioglu16@gsb.columbia.edu"),
               person(given = c("Juan", "P."),
                      family = "Vielma",
                      role = "aut",
                      email = "jvielma@mit.edu"),
               person(given = c("Eric", "R."),
                      family = "Cohn",
                      role = "aut",
                      email = "ericcohn@g.harvard.edu"))
as necessary.
Maintainer: ‘Max Kuhn <mxkuhn@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Max",
                    family = "Kuhn",
                    role = c("aut", "cre"),
                    email = "mxkuhn@gmail.com")
as necessary.
Maintainer: ‘Stanley E. Lazic <stan.lazic@cantab.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Stanley", "E."),
                    family = "Lazic",
                    role = c("aut", "cre"),
                    email = "stan.lazic@cantab.net")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
roll.win 4.641  0.042   5.329
Maintainer: ‘Robert Adamek <robertadamek94@gmail.com>’

The Description field contains
  covariance estimator in Adamek et al. (2020) <arXiv:2007.10952>. Also
  as described in Adamek et al. (2022) <arXiv:2209.03218>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
'library' or 'require' call not declared from: ‘nlme’
Maintainer: ‘Norm Matloff <normmatloff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Norm",
                    family = "Matloff",
                    role = c("aut", "cre"),
                    email = "normmatloff@gmail.com")
as necessary.
Maintainer: ‘Peter Solymos <psolymos@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Peter",
                      family = "Solymos",
                      role = c("cre", "aut"),
                      email = "psolymos@gmail.com"),
               person(given = "Monica",
                      family = "Moreno",
                      role = "aut"),
               person(given = c("Subhash", "R."),
                      family = "Lele",
                      role = "aut"))
as necessary.
checkRd: (-1) detour-shiny.Rd:26: Lost braces; missing escapes or markup?
    26 | \item{expr}{an expression that generates a {detourr} widget}
       |                                            ^
checkRd: (-1) show_sage.Rd:80: Lost braces; missing escapes or markup?
    80 | supported using {crosstalk}. The set of interactive controls available are:
       |                 ^
checkRd: (-1) show_scatter.Rd:67: Lost braces; missing escapes or markup?
    67 | supported using {crosstalk}. The set of interactive controls available are:
       |                 ^
checkRd: (-1) show_scatter_internal.Rd:65: Lost braces; missing escapes or markup?
    65 | supported using {crosstalk}. The set of interactive controls available are:
       |                 ^
checkRd: (-1) show_slice.Rd:76: Lost braces; missing escapes or markup?
    76 | supported using {crosstalk}. The set of interactive controls available are:
       |                 ^
checkRd: (-1) tour_aes.Rd:11: Lost braces; missing escapes or markup?
    11 | Variables are evaluated using {tidyselect} syntax.}
       |                               ^
Maintainer: ‘Daniel Meyer <meyerda@ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Meyer",
                    role = c("aut", "cre"),
                    email = "meyerda@ethz.ch")
as necessary.

The Description field contains
  see: Meyer, D.W. (2016) <arXiv:1610.00345> or Meyer, D.W., Statistics
  (2017) <arXiv:1711.04632> or Meyer, D.W., Journal of Computational and
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘det.construct.Rd’:
    https://doi.org/10.1007/s11222-017-9751-9
  File ‘detpack.Rd’:
    https://doi.org/10.1007/s11222-017-9751-9
    https://doi.org/10.1080/10618600.2018.1482768
Maintainer: ‘Filipe Campelo <fcampelo@ci.uc.pt>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Filipe",
                    family = "Campelo",
                    role = c("aut", "cre"),
                    email = "fcampelo@ci.uc.pt")
as necessary.
Specified C++11: please drop specification unless essential
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DetLTS.Rd: h.alpha.n
  OGKCStep.Rd: h.alpha.n
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Guangsheng Pei <peiguangsheng@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Guangsheng",
                    family = "Pei",
                    role = c("aut", "cre"),
                    email = "peiguangsheng@gmail.com")
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘deTS-package.Rd’:
    \keyword{ deTS; TSEA }
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
tsea.summary 4.445  0.043   7.062
deTS-package 3.132  0.101   5.652
Maintainer: ‘Magnus Kristoffersen <magnus.kristoffersen@geo.uio.no>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Robin Van Oirbeek <robin.vanoirbeek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Robin",
                    family = "Van Oirbeek",
                    role = c("aut", "cre"),
                    email = "robin.vanoirbeek@gmail.com")
as necessary.
Maintainer: ‘John Verzani <jverzani@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Original", "by", "Jay", "L."),
                      family = "Devore",
                      role = "aut"),
               person(given = c("modifications", "by", "Douglas"),
                      family = "Bates",
                      role = "aut",
                      email = "bates@stat.wisc.edu"),
               person(given = c("modifications", "for", "7th", "edition", "by", "John"),
                      family = "Verzani.",
                      role = "aut"),
               person(given = "John",
                      family = "Verzani",
                      role = "cre",
                      email = "jverzani@gmail.com"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  check.Rd: compiler_flags
  remote-reexports.Rd: ellipsis
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
CompareRulesOnValidation 8.362   0.14  10.409
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘aov.R’ ‘create_subtree.R’ ‘create_tree.R’ ‘monte_carlo.R’ ‘node.R’
    ‘oat.R’ ‘option.R’ ‘sensitivity_index.R’ ‘synoptique.R’ ‘tree.R’
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
aov_tree      10.518  0.166  13.432
visualize_aov 10.032  0.020  12.817
Maintainer: ‘Victor Barreto Mesquita <victormesquita40@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Victor", "Barreto"),
                      family = "Mesquita",
                      role = c("ctb", "aut", "cre"),
                      email = "victormesquita40@hotmail.com"),
               person(given = c("Florêncio", "Mendes", "Oliveira"),
                      family = "Filho",
                      role = c("ctb", "aut")),
               person(given = c("Ian", "Meneghel"),
                      family = "Danilevicz.",
                      role = c("ctb", "aut")))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
ABI 6.143  0.004   7.039
Maintainer: ‘Shawn Waldroff <swaldroff@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shawn",
                    family = "Waldroff",
                    role = c("aut", "cre"),
                    email = "swaldroff@gmail.com")
as necessary.
Maintainer: ‘Jimmy Duong <jkd2108@columbia.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ken",
                      family = "Cheung",
                      role = "aut",
                      email = "yc632@columbia.edu"),
               person(given = "Jimmy",
                      family = "Duong",
                      role = "cre",
                      email = "jkd2108@columbia.edu"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘differentiate.R’ ‘gradient.R’ ‘simplify.R’
Maintainer: ‘Victor H. Cervantes <vhcervantesb@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Victor", "H."),
                    family = "Cervantes",
                    role = c("aut", "cre"),
                    email = "vhcervantesb@unal.edu.co")
as necessary.
Maintainer: ‘Artemis Toumazi <artemis.toumazi@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Artemis",
                      family = "Toumazi",
                      role = c("aut", "cre"),
                      email = "artemis.toumazi@gmail.com"),
               person(given = "Sarah",
                      family = "Zohar",
                      role = "aut",
                      email = "sarah.zohar@inserm.fr"),
               person(given = c("Anand", "N."),
                      family = "Vidyashankar",
                      role = "aut",
                      email = "avidyash@gmu.edu"),
               person(given = "Jie",
                      family = "Xu",
                      role = "aut",
                      email = "jxu13@gmu.edu"),
               person(given = "Moreno",
                      family = "Ursino",
                      role = "aut",
                      email = "moreno.ursino@inserm.fr"))
as necessary.

File 'R/dfmeta-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  MA_estimates.Rd: glmer, lmerControl, glmerControl
  REMB-class.Rd: glmer
  glimem.Rd: glmer, lmerControl, glmerControl
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ravi",
                      family = "Varadhan",
                      role = c("aut", "cre"),
                      email = "ravi.varadhan@jhu.edu"),
               person(given = c("Johns", "Hopkins"),
                      family = "University"),
               person(given = c("Hans", "W."),
                      family = "Borchers",
                      role = "aut"),
               person(given = c("ABB", "Corporate"),
                      family = "Research"),
               person(given = "Vincent",
                      family = "Bechard",
                      role = "aut"),
               person(given = "HEC",
                      family = "Montreal",
                      comment = "Montreal University"))
as necessary.
Maintainer: ‘Leihong Wu <leihong.wu@fda.hhs.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Leihong",
                      family = "Wu",
                      role = c("aut", "cre"),
                      email = "leihong.wu@fda.hhs.gov"),
               person(given = "Weida",
                      family = "Tong",
                      role = "aut",
                      comment = "Weida.tong@fda.hhs.gov"))
as necessary.
Maintainer: ‘Artemis Toumazi <artemis.toumazi@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Artemis",
                      family = "Toumazi",
                      role = c("aut", "cre"),
                      email = "artemis.toumazi@gmail.com"),
               person(given = "Caroline",
                      family = "Petit",
                      role = "aut",
                      email = "caroline.petit@crc.jussieu.fr"),
               person(given = "Sarah",
                      family = "Zohar",
                      role = "aut",
                      email = "sarah.zohar@inserm.fr"))
as necessary.

File 'R/dfped-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Giovanna Capizzi <giovanna.capizzi@unipd.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Giovanna",
                      family = "Capizzi",
                      role = c("aut", "cre"),
                      email = "giovanna.capizzi@unipd.it"),
               person(given = "Guido",
                      family = "Masarotto",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
dfr_adap_sgl.cv 13.432  0.233  17.695
dfr_sgl.cv      12.958  0.031  15.365
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
dfrr 6.127  0.087   7.696
Maintainer: ‘Shipei Zeng <shipei.zeng@unswalumni.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shipei",
                    family = "Zeng",
                    role = c("aut", "cre"),
                    email = "shipei.zeng@unswalumni.com")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Nicolae Teodor Melita <nt_melita@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nicolae", "Teodor"),
                    family = "Melita",
                    role = c("aut", "cre"),
                    email = "nt_melita@yahoo.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
initDGEobj 3.782  0.142   5.171
checkRd: (-1) runContrasts.Rd:79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:82: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Sebastian Krantz <sebastian.krantz@graduateinstitute.ch>’

The BugReports field in DESCRIPTION has
  https://github.com/r-barnes/dggridR/
which should likely be
  https://github.com/r-barnes/dggridR/issues
instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dggridR.R’
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
dgrectgrid 5.169      0   7.175
checkRd: (-1) AIC.dglars.Rd:47: Lost braces
    47 | \item{comp}{the measures of model complexity used to compute the measure of goodness-of-fit. It is equal to \code{npar} when code{complexity = "df"};}
       |                                                                                                                                  ^
checkRd: (-1) dglars.Rd:258: Lost braces
   258 |                 \item{\code{7}}{maximum number of solution points ('code{np}') reached.}
       |                                                                         ^
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
grcv       5.493  0.083   8.222
phihat     4.357  0.019   5.582
AIC.dglars 2.685  0.172   5.242
Maintainer: ‘Gordon Smyth <smyth@wehi.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Gordon",
                      family = "Smyth",
                      role = c("aut", "cre"),
                      email = "smyth@wehi.edu.au"),
               person(given = c("Peter", "K"),
                      family = "Dunn",
                      role = "aut",
                      email = "pdunn2@usc.edu.au"),
               person(given = c("Robert", "W."),
                      family = "Corty",
                      role = "aut"))
as necessary.
Maintainer: ‘Simon Schwab <schw4b@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Simon",
                      family = "Schwab",
                      role = c("aut", "cre"),
                      email = "schw4b@gmail.com"),
               person(given = "Ruth",
                      family = "Harbord",
                      role = "aut",
                      email = "r.harbord@warwick.ac.uk"),
               person(given = "Lilia",
                      family = "Costa",
                      role = "aut",
                      email = "liliacosta@ufba.br"),
               person(given = "Thomas",
                      family = "Nichols",
                      role = "aut",
                      email = "t.e.nichols@warwick.ac.uk"))
as necessary.
Specified C++11: please drop specification unless essential
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
testCategorical 3.806  0.118   5.432
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Lumley",
                    role = c("aut", "cre"),
                    email = "t.lumley@auckland.ac.nz")
as necessary.

The Description field contains
  or Regional Councils. The preprint Lumley (2019) <arXiv:1912.04435> is
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Samarendra Das <samarendra4849@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Samarendra",
                      family = "Das",
                      role = c("aut", "cre"),
                      email = "samarendra4849@gmail.com"),
               person(given = c("Baidya", "Nath"),
                      family = "Mandal",
                      role = "aut",
                      email = "mandal.stat@gmail.com"))
as necessary.
Maintainer: ‘Maengseok Noh <msnoh@pknu.ac.kr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Youngjo",
                      family = "Lee",
                      role = "aut"),
               person(given = "Maengseok",
                      family = "Noh",
                      role = c("aut", "cre"),
                      email = "msnoh@pknu.ac.kr"))
as necessary.
Maintainer: ‘Niklas Pfister <pfister@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Niklas",
                      family = "Pfister",
                      role = c("aut", "cre"),
                      email = "pfister@stat.math.ethz.ch"),
               person(given = "Jonas",
                      family = "Peters",
                      role = "aut"))
as necessary.
checkRd: (-1) dHSIC-package.Rd:32: Lost braces
    32 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dHSIC-package.Rd:36: Lost braces
    36 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dHSIC-package.Rd:36: Lost braces
    36 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
checkRd: (-1) dhsic.Rd:84: Lost braces
    84 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dhsic.Rd:88: Lost braces
    88 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dhsic.Rd:88: Lost braces
    88 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
checkRd: (-1) dhsic.test.Rd:124: Lost braces
   124 |   Gretton, A., K. Fukumizu, C. H. Teo, L. Song, B. Sch{\"o}lkopf and
       |                                                       ^
checkRd: (-1) dhsic.test.Rd:128: Lost braces
   128 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                    ^
checkRd: (-1) dhsic.test.Rd:128: Lost braces
   128 |   Pfister, N., P. B{\"u}hlmann, B. Sch{\"o}lkopf and J. Peters (2017).
       |                                       ^
Maintainer: ‘Mahmoud Elkasabi <mahmoudelkasabi@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mahmoud",
                    family = "Elkasabi",
                    role = c("aut", "cre"),
                    email = "mahmoudelkasabi@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
chmort 4.855  0.265   6.311
fert   4.363  0.019   5.256
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  class_to_regL1.Rd: rq
  class_to_rq.Rd: rq
  forwardSearch_regL1.Rd: lmsreg, rq, rq.fit.br, rq.fit.fnb
  regL1.Rd: rq, rq.fit.br, rq.fit.fnb
  regL1_het.Rd: rq, rq.fit.br, rq.fit.fnb
  summary.regL1.Rd: summary.rq, boot.rq
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Karline Soetaert <karline.soetaert@nioz.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Karline",
                    family = "Soetaert",
                    role = c("aut", "cre"),
                    email = "karline.soetaert@nioz.nl")
as necessary.
Author field differs from that derived from Authors@R
  Author:    ‘Max Kuhn [aut], Hannah Frick [aut, cre], Posit Software, PBC [cph, fnd] (03wc8by49)’
  Authors@R: ‘Max Kuhn [aut], Hannah Frick [aut, cre], Posit Software, PBC [cph, fnd] (ROR: <https://ror.org/03wc8by49>)’
Maintainer: ‘Shinichiro Tomizono <cowares@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Shinichiro",
                    family = "Tomizono",
                    role = c("aut", "cre"),
                    email = "cowares@gmail.com")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘diario.R’
Maintainer: ‘Celine Helbert <Celine.Helbert@ec-lyon.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jessica",
                      family = "Franco",
                      role = "aut"),
               person(given = "Delphine",
                      family = "Dupuy",
                      role = "aut"),
               person(given = "Olivier",
                      family = "Roustant",
                      role = "aut"),
               person(given = "Patrice",
                      family = "Kiener",
                      role = "aut"),
               person(given = "Guillaume",
                      family = "Damblin",
                      role = "aut"),
               person(given = "Bertrand",
                      family = "Iooss.",
                      role = "aut"),
               person(given = "Celine",
                      family = "Helbert",
                      role = "cre",
                      email = "Celine.Helbert@ec-lyon.fr"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
DiceDesign-package 4.471  0.081   5.863
Maintainer: ‘C. Helbert <Celine.Helbert@ec-lyon.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "D.",
                      family = "Dupuy",
                      role = "aut"),
               person(given = "C.",
                      family = "Helbert",
                      role = c("aut", "cre"),
                      email = "celine.helbert@ec-lyon.fr"))
as necessary.
Maintainer: ‘Olivier Roustant <roustant@insa-toulouse.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Olivier",
                      family = "Roustant",
                      role = c("aut", "cre"),
                      email = "roustant@insa-toulouse.fr"),
               person(given = "David",
                      family = "Ginsbourger",
                      role = "aut"),
               person(given = c("Yves", "Deville.", "Contributors:", "Clement"),
                      family = "Chevalier",
                      role = "aut"),
               person(given = "Yann",
                      family = "Richet.",
                      role = "aut"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
DICE 6.543  0.472   9.908
Maintainer: ‘Dylan Arena <dylanarena1@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dylan",
                    family = "Arena",
                    role = c("aut", "cre"),
                    email = "dylanarena1@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
consensus_combine 3.648  0.075   5.067
Maintainer: ‘Liudmila Karagyaur <liudmila.karagyaur@usi.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Paul",
                      family = "Schneider",
                      role = c("aut", "ths")),
               person(given = "Liudmila",
                      family = "Karagyaur",
                      role = c("aut", "cre"),
                      email = "liudmila.karagyaur@usi.ch"))
as necessary.
checkRd: (-1) DIconvex.Rd:40: Lost braces; missing escapes or markup?
    40 |  {Paul Schneider <paul.schneider@usi.ch>}{}
       |  ^
checkRd: (-1) define.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:17-18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:21-22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) define.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
Maintainer: ‘Christian Vincenot <christian@vincenot.biz>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christian",
                    family = "Vincenot",
                    role = c("aut", "cre"),
                    email = "christian@vincenot.biz")
as necessary.
Maintainer: ‘Kyle Butts <kyle.butts@colorado.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
checkRd: (-1) did_imputation.Rd:74: Lost braces; missing escapes or markup?
    74 | form average treatment effects for groups of {it}.
       |                                              ^
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
did_multiplegt     5.850  0.098   8.205
did_multiplegt_old 5.444  0.031   7.423
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘diem.r’ ‘internal.r’ ‘rank2map.r’ ‘vcf2diem.r’
Maintainer: ‘Christian Graul <christian.graul@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christian",
                    family = "Graul",
                    role = c("aut", "cre"),
                    email = "christian.graul@gmail.com")
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gunther",
                    family = "Schauberger",
                    role = c("aut", "cre"),
                    email = "gunther.schauberger@tum.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                                   user system elapsed
difconet.run                      5.692  0.004   6.548
difconet.plot.histograms.heatmap2 5.683  0.008   7.804
difconet.plot.gene.correlations   5.547  0.047   6.949
Maintainer: ‘Riaz Arbi <diffdfs@arbidata.com>’

The BugReports field in DESCRIPTION has
  https://github.com/riazarbi/diffdfs
which should likely be
  https://github.com/riazarbi/diffdfs/issues
instead.
Maintainer: ‘Beilun Wang <bw4mw@virginia.edu>’

The Description field contains
  Yanjun Qi (2018) <arXiv:1710.11223>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

The BugReports field in DESCRIPTION has
  https://github.com/QData/DIFFEE
which should likely be
  https://github.com/QData/DIFFEE/issues
instead.
Maintainer: ‘Michele Braccini <braccini.michele@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michele",
                    family = "Braccini",
                    role = c("aut", "cre"),
                    email = "braccini.michele@gmail.com")
as necessary.
Maintainer: ‘Ali Santacruz <amsantac@unal.edu.co>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Robert", "Gilmore"),
                      family = "Pontius Jr.",
                      role = "aut",
                      email = "rpontius@clarku.edu"),
               person(given = "Ali",
                      family = "Santacruz",
                      role = c("aut", "cre"),
                      email = "amsantac@unal.edu.co"))
as necessary.
Maintainer: ‘Dylan Molenaar <d.molenaar@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dylan",
                    family = "Molenaar",
                    role = c("aut", "cre"),
                    email = "d.molenaar@uva.nl")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Benjamin Rubinstein <brubinstein@unimelb.edu.au>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid file URI:
  URI: commits/master
    From: README.md

The Description field contains
  sensitivity sampler (Rubinstein & Alda, 2017) <arXiv:1706.02562>
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) sensitivitySamplerManual-DPMech-function-numeric-numeric-numeric-method.Rd:25: Lost braces
    25 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
checkRd: (-1) sensitivitySamplerManual-DPMechNumeric-function-numeric-numeric-numeric-method.Rd:25: Lost braces
    25 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
checkRd: (-1) sensitivitySamplerManual.Rd:22: Lost braces
    22 | \item{k}{order statistic index in {1,...,\code{m}}.}
       |                                   ^
Author field differs from that derived from Authors@R
  Author:    ‘Joseph Richards [aut] (joeyrichar), Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood)’
  Authors@R: ‘Joseph Richards [aut] (github: joeyrichar), Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood)’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
adapreg.m 5.056  0.123   6.830
adapreg   3.989  0.195   5.146
checkRd: (-1) simulate_diff_tables.Rd:72: Lost braces; missing escapes or markup?
    72 |   {The Sharma-Song test} {\code{\link[DiffXTables]{sharma.song.test}}}
       |   ^
checkRd: (-1) simulate_diff_tables.Rd:74: Lost braces; missing escapes or markup?
    74 |   {The comparative chi-squared test} {\code{\link[DiffXTables]{cp.chisq.test}}}
       |   ^
checkRd: (-1) simulate_diff_tables.Rd:76: Lost braces; missing escapes or markup?
    76 |   {The heterogeneity test} {\code{\link[DiffXTables]{heterogeneity.test}}}
       |   ^
Maintainer: ‘Gunther Schauberger <gunther.schauberger@tum.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gunther",
                    family = "Schauberger",
                    role = c("aut", "cre"),
                    email = "gunther.schauberger@tum.de")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
difORD 5.873  0.075   7.989
Maintainer: ‘David Magis <david.magis@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Magis",
                      role = c("aut", "cre"),
                      email = "david.magis@gmail.com",
                      comment = "U Liege"),
               person(given = "Sebastien",
                      family = "Beland",
                      role = "aut",
                      comment = "U Montreal"),
               person(given = "Gilles",
                      family = "Raiche",
                      role = "aut",
                      comment = "UQAM"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) difTID.Rd:185: Lost braces
   185 |  \code{\link[deltaPlotR]{deltaPlot}}, code{\link[deltaPlotR]{diagPlot}}, \code{\link{dichoDif}}
       |                                           ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  itemPar1PL.rd: rasch
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Huseyin Yildiz <huseyinyildiz35@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Huseyin",
                    family = "Yildiz",
                    role = c("aut", "cre"),
                    email = "huseyinyildiz35@gmail.com")
as necessary.
Maintainer: ‘Moritz Berger <moritz.berger@imbie.uni-bonn.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Moritz",
                    family = "Berger",
                    role = c("aut", "cre"),
                    email = "moritz.berger@imbie.uni-bonn.de")
as necessary.
'::' or ':::' import not declared from: ‘rbenchmark’
Maintainer: ‘Xutao Deng <xutaodeng@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Xutao",
                    family = "Deng",
                    role = c("aut", "cre"),
                    email = "xutaodeng@gmail.com")
as necessary.
Maintainer: ‘Jaime Ashander <jashander@ucdavis.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
digitTests 4.38  0.028   5.522
Maintainer: ‘Mark Hubbe <hubbe.1@osu.edu>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dilp_functions.R’
Author field differs from that derived from Authors@R
  Author:    ‘Nicolas Frerebeau [aut, cre] (<https://orcid.org/0000-0001-5759-4944>), Jean-Baptiste Fourvel [ctb] (<https://orcid.org/0000-0002-1061-4642>), Camille Thabard [ctb] (<https://orcid.org/0000-0002-3196-7658>), Brice Lebrun [art] (<https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (03pbgwk21), CNRS [fnd] (02feahw73)’
  Authors@R: ‘Nicolas Frerebeau [aut, cre] (ORCID: <https://orcid.org/0000-0001-5759-4944>), Jean-Baptiste Fourvel [ctb] (ORCID: <https://orcid.org/0000-0002-1061-4642>), Camille Thabard [ctb] (ORCID: <https://orcid.org/0000-0002-3196-7658>), Brice Lebrun [art] (ORCID: <https://orcid.org/0000-0001-7503-8685>, Logo designer), Université Bordeaux Montaigne [fnd] (ROR: <https://ror.org/03pbgwk21>), CNRS [fnd] (ROR: <https://ror.org/02feahw73>)’
Maintainer: ‘Cenny Taslim <taslim.2@osu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Cenny",
                      family = "Taslim",
                      role = c("aut", "cre"),
                      email = "taslim.2@osu.edu"),
               person(given = c("with", "contributions", "from", "Dustin"),
                      family = "Potter",
                      role = "aut"),
               person(given = "Abbasali",
                      family = "Khalili",
                      role = "aut"),
               person(given = "Shili",
                      family = "Lin.",
                      role = "aut",
                      email = "shili@stat.osu.edu"))
as necessary.
checkRd: (-1) DIME.Rd:272: Lost braces; missing escapes or markup?
   272 | \item{name}{the name of the model {"GNG", "iNUDGE","NUDGE"} where
       |                                   ^
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
DImodelsMulti 5.96  0.214   7.755
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
sim5 4.316  0.087   6.577
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
conditional_ternary      8.286  0.355   6.528
grouped_ternary          8.272  0.210   6.456
simplex_path             7.185  0.000   9.499
conditional_ternary_plot 6.293  0.205   4.436
model_diagnostics        6.487  0.006   8.305
grouped_ternary_plot     6.282  0.179   4.074
DImodelsVis-package      5.908  0.349   8.537
visualise_effects        6.095  0.009   7.815
simplex_path_data        5.612  0.000   7.305
model_selection          5.335  0.034   6.766
gradient_change_plot     5.234  0.104   7.247
ternary_data             4.028  1.305   5.193
simplex_path_plot        4.932  0.064   5.926
gradient_change          3.959  0.049   5.886
prediction_contributions 3.962  0.004   5.478
Maintainer: ‘Savio Andrea <svandr97@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zanghi",
                      family = "Federico",
                      role = "aut"),
               person(given = "Savio",
                      family = "Andrea",
                      role = c("aut", "cre"),
                      email = "svandr97@gmail.com"),
               person(given = "Filippo",
                      family = "Ziliotto",
                      role = "aut"),
               person(given = "Bessi",
                      family = "Alessandro",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
detailedLook 8.31  0.068   10.33
Maintainer: ‘James Joseph Balamuta <balamut2@illinois.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Maintainer: ‘René Schulenberg <reneschulenberg@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "René",
                    family = "Schulenberg",
                    role = c("aut", "cre"),
                    email = "reneschulenberg@gmail.com")
as necessary.
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Ryan", "C."),
                      family = "Sartor",
                      role = c("aut", "cre"),
                      email = "sartorry@gmail.com"),
               person(given = "Kathleen",
                      family = "Greenham",
                      role = "aut",
                      email = "greenham@umn.edu"))
as necessary.

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
ggPlotMultiDensities 4.056  0.188   5.148
66,67d65
< OMP: Warning #96: Cannot form a team with 32 threads, using 3 instead.
< OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
File ‘dipsaus/libs/dipsaus.so’:
  Found non-API calls to R: ‘CLOENV’, ‘ENCLOS’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Ruoqi Yu <ruoqiyu125@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ruoqi",
                    family = "Yu",
                    role = c("aut", "cre"),
                    email = "ruoqiyu125@gmail.com")
as necessary.
Maintainer: ‘Martin Maechler <maechler@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Martin",
                    family = "Maechler",
                    role = c("aut", "cre"),
                    email = "maechler@stat.math.ethz.ch",
                    comment = "originally from Fortran and S-plus by Dario Ringach, NYU.edu")
as necessary.
Maintainer: ‘Yuhao Wang <yuhaow.thu@gmail.com>’

The Description field contains
  High-Dimensional Confounders" <arXiv:2011.08661>. The package relies on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
telescope_match 5.344  0.175   7.413
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
esag.reg 5.907  0.006   7.372
Maintainer: ‘Toby Dylan Hocking <toby.hocking@r-project.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Toby", "Dylan"),
                    family = "Hocking",
                    role = c("aut", "cre"),
                    email = "toby.hocking@r-project.org")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
geom_dl            5.912  0.016   8.039
panel.superpose.dl 4.989  0.015   6.224
qp.labels          3.893  0.020   5.428
direct.label       3.695  0.121   5.864
Maintainer: ‘Pengyi Yang <yangpy7@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Pengyi", "Yang", "&", "Ellis"),
                      family = "Patrick",
                      role = "aut"),
               person(given = "Pengyi",
                      family = "Yang",
                      role = "cre",
                      email = "yangpy7@gmail.com"))
as necessary.
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Audrey", "Qiuyan"),
                      family = "Fu",
                      role = "aut"),
               person(given = "Steven",
                      family = "Russell",
                      role = "aut"),
               person(given = c("Sarah", "J."),
                      family = "Bray",
                      role = "aut"),
               person(given = "Simon",
                      family = "Tavare",
                      role = "aut"),
               person(given = c("Audrey", "Q."),
                      family = "Fu",
                      role = "cre",
                      email = "audreyqyfu@gmail.com"))
as necessary.
Maintainer: ‘Christiana Kartsonaki <christiana.kartsonaki@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Christiana",
                    family = "Kartsonaki",
                    role = c("aut", "cre"),
                    email = "christiana.kartsonaki@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
plot.dirichletprocess 4.396  0.034   5.308
Maintainer: ‘Marco Johannes Maier <marco_maier@posteo.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DirichletRegModel.Rd: update.Formula
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Torben Tvedebrink <tvede@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Torben",
                    family = "Tvedebrink",
                    role = c("aut", "cre"),
                    email = "tvede@math.aau.dk")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Eduardo García-Portugués <edgarcia@est-econ.uc3m.es>’

The BugReports field in DESCRIPTION has
  https://github.com/egarpor/DirStats
which should likely be
  https://github.com/egarpor/DirStats/issues
instead.
Maintainer: ‘Alexander Seipp <alexander.seipp@uni-oldenburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alexander",
                      family = "Seipp",
                      role = c("aut", "cre"),
                      email = "alexander.seipp@uni-oldenburg.de"),
               person(given = "Fabian",
                      family = "Otto-Sobotka",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  expectreg.aft.Rd: rb, cdf.qp, cdf.bundle, summary.expectreg,
    plot.expectreg, predict.expectreg, resid.expectreg,
    fitted.expectreg, effects.expectreg
  modreg.Rd: control
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
expectreg.aft  7.382  0.146   9.129
plot.modreg    6.152  0.210   9.675
predict.modreg 5.864  0.041   9.001
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
getStartendindex 6.782  0.105   8.693
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
ClustDiffGenes 10.739   0.11  14.424
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
dfzinbt 9.709  0.008  12.753
dfnb    8.907  0.074  12.960
dfpt    7.409  0.003   9.943
dfzinb  6.795  0.000   8.991
dfp     5.660  0.078   7.141
dfnbt   4.914  0.003   6.999
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  nelsonaalen_npdf.Rd: survfit
  npdf_cox.Rd: Surv
  plot.npdf.Rd: survfit.formula, plot.survfit
  survfit_npdf.Rd: survfit.formula
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
prepareBaseline 4.313  0.089   5.466
Specified C++11: please drop specification unless essential
Maintainer: ‘Mikkel Meyer Andersen <mikl@math.aau.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mikkel", "Meyer"),
                      family = "Andersen",
                      role = c("aut", "cre"),
                      email = "mikl@math.aau.dk"),
               person(given = c("Poul", "Svante"),
                      family = "Eriksen",
                      role = "aut"))
as necessary.
Maintainer: ‘Njål Foldnes <njal.foldnes@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
bootTest 5.369  0.288    6.96
Author field differs from that derived from Authors@R
  Author:    ‘S. Mason Garrison [aut, cre, cph] (<https://orcid.org/0000-0002-4804-6003>), Jonathan Trattner [aut] (<https://orcid.org/0000-0002-1097-7603>, https://www.jdtrat.com/), Yoo Ri Hwang [aut], Cermet Ream [ctb]’
  Authors@R: ‘S. Mason Garrison [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-4804-6003>), Jonathan Trattner [aut] (ORCID: <https://orcid.org/0000-0002-1097-7603>, url: https://www.jdtrat.com/), Yoo Ri Hwang [aut], Cermet Ream [ctb]’
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
discord_data       4.122  0.015   5.132
discord_regression 4.121  0.000   5.297
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
check_title 7.712  0.034  11.288
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
HYPERPO2 4.492  0.004   5.444
GGEO     4.436  0.004   5.342
DGEII    4.372  0.020   6.189
Specified C++11: please drop specification unless essential
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessandro",
                      family = "Barbiero",
                      role = c("aut", "cre"),
                      email = "alessandro.barbiero@unimi.it"),
               person(given = "Riccardo",
                      family = "Inchingolo",
                      role = "aut"),
               person(given = "Mario",
                      family = "Samigli",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘estdiweibull.Rd’:
    \keyword{distribution, htest}
  File ‘heuristic.Rd’:
    \keyword{distribution, htest}
  File ‘loglikediw.Rd’:
    \keyword{distribution, htest}
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alessandro",
                      family = "Barbiero",
                      role = c("aut", "cre"),
                      email = "alessandro.barbiero@unimi.it"),
               person(given = "Riccardo",
                      family = "Inchingolo",
                      role = "aut",
                      email = "dott.inchingolo_r@libero.it"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘estdlaplace2.Rd’:
    \keyword{distribution,htest}
  File ‘iFI.Rd’:
    \keyword{distribution,htest}
  File ‘iFI2.Rd’:
    \keyword{distribution,htest}

Found the following URLs which should use \doi (with the DOI name only):
  File ‘DiscreteLaplace-package.Rd’:
    http://dx.doi.org/10.1007/s10463-005-0029-1
    http://dx.doi.org/10.1016/j.stamet.2013.07.002
Maintainer: ‘Alessandro Barbiero <alessandro.barbiero@unimi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alessandro",
                    family = "Barbiero",
                    role = c("aut", "cre"),
                    email = "alessandro.barbiero@unimi.it")
as necessary.
Maintainer: ‘HyunJi Kim <polaris7867@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "HyunJi",
                    family = "Kim",
                    role = c("aut", "cre"),
                    email = "polaris7867@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  discrim-package.Rd: discrim_flexible
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) mc_attitudes.Rd:52: Lost braces
    52 | P\'{a}ez, A. (2013). Mapping travelers’ attitudes: does space matter?. Journal of Transport Geography, 26, 117-125. (https://doi.org/10.1016/j.jtrangeo.2012.09.002)
       |    ^
checkRd: (-1) mc_commute.csv.Rd:49: Lost braces
    49 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_commute_long.Rd:74: Lost braces
    74 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_commute_wide.Rd:87: Lost braces
    87 | Whalen, K. E., P\'{a}ez, A., & Carrasco, J. A. (2013). Mode choice of university students commuting to school and the role of active travel. Journal of Transport Geography, 31, 132-142. (https://doi.org/10.1016/j.jtrangeo.2013.06.008)
       |                   ^
checkRd: (-1) mc_modality.Rd:50: Lost braces
    50 | Lavery, T., P\'{a}ez, A., & Kanaroglou, P.S. (2013). Driving out of choices: An investigation of transport modality in a university sample. Transportation Research Part A: Policy and Practice, 57:37-46 (https://doi.org/10.1016/j.tra.2013.09.010)
       |                ^
Maintainer: ‘Thomas Welchowski <welchow@imbie.meb.uni-bonn.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Thomas",
                      family = "Welchowski",
                      role = c("aut", "cre"),
                      email = "welchow@imbie.meb.uni-bonn.de"),
               person(given = "Moritz",
                      family = "Berger",
                      role = "aut",
                      email = "moritz.berger@imbie.uni-bonn.de"),
               person(given = "David",
                      family = "Koehler",
                      role = "aut",
                      email = "koehler@imbie.uni-bonn.de"),
               person(given = "Matthias",
                      family = "Schmid",
                      role = "aut",
                      email = "matthias.schmid@imbie.uni-bonn.de"))
as necessary.
checkRd: (-1) cIndex.Rd:32: Lost braces; missing escapes or markup?
    32 | [a_{q-1}, a_q) are available.
       |    ^
checkRd: (-1) cIndexCompRisks.Rd:31: Lost braces; missing escapes or markup?
    31 | [a_{q-1}, a_q) are available.
       |    ^
checkRd: (-1) dataCensoring.Rd:78: Escaped LaTeX specials: \&
checkRd: (-1) dataLong.Rd:170: Escaped LaTeX specials: \&
checkRd: (-1) dataLongCompRisksTimeDep.Rd:130: Escaped LaTeX specials: \&
checkRd: (-1) dataLongMultiSpell.Rd:123: Escaped LaTeX specials: \&
checkRd: (-1) dataLongTimeDep.Rd:96: Escaped LaTeX specials: \&
checkRd: (-1) estMargProb.Rd:23: Lost braces; missing escapes or markup?
    23 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estMargProbCompRisks.Rd:24: Lost braces; missing escapes or markup?
    24 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estSurv.Rd:23: Lost braces; missing escapes or markup?
    23 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) estSurvCompRisks.Rd:24: Lost braces; missing escapes or markup?
    24 | a_2), ..., [a_{q-1}, a_q), [a_q, Inf).
       |               ^
checkRd: (-1) lifeTable.Rd:21: Lost braces; missing escapes or markup?
    21 | [a_0, a_1), [a_1, a_2), ..., [a_{q-1}, a_q) ("character vector")}
       |                                 ^
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
cIndex 3.722  0.102   6.215
Maintainer: ‘Tao Wang <tao.wang@utsouthwestern.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Tao",
                    family = "Wang",
                    role = c("aut", "cre"),
                    email = "tao.wang@utsouthwestern.edu")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
DisHet 3.452  0.106   5.088
Maintainer: ‘Hasanthi A. Pathberiya <hasanthi@sjp.ac.lk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hasanthi", "A."),
                    family = "Pathberiya",
                    role = c("aut", "cre"),
                    email = "hasanthi@sjp.ac.lk")
as necessary.
checkRd: (-1) csv_to_disk.frame.Rd:56: Lost braces; missing escapes or markup?
    56 | strings, and you are encouraged to use {fasttime} to convert the strings to
       |                                        ^
checkRd: (-1) purrr_as_mapper.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{.f}{a normal function or purrr syntax function i.e. `~{ ...code...}`}
       |                                                             ^
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
gbm.step 4.76  0.094   5.685
Maintainer: ‘Gábor Csárdi <csardi.gabor@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Gábor",
                    family = "Csárdi",
                    role = c("aut", "cre"),
                    email = "csardi.gabor@gmail.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
null.test 5.334  0.091   6.878
multi.ace 4.602  0.003   5.541
Maintainer: ‘Pierre Roudier <roudierp@landcareresearch.co.nz>’

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dissever.Rd’:
    http://dx.doi.org/10.1016/j.cageo.2011.08.021
  File ‘edgeroi.Rd’:
    http://dx.doi.org/10.1016/S0016-7061(03)00223-4
    http://dx.doi.org/10.1016/j.geoderma.2009.10.007
Maintainer: ‘Sang Kyu Lee <lsk0816@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sang", "Kyu"),
                      family = "Lee",
                      role = c("aut", "cre"),
                      email = "lsk0816@gmail.com"),
               person(given = "Adelchi",
                      family = "Azzalini",
                      role = "aut",
                      email = "adelchi.azzalini@unipd.it"),
               person(given = "Hyoung-Moon",
                      family = "Kim",
                      role = "aut",
                      email = "hmk966a@gmail.com"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘CreditMDR.Rd’:
    https://doi.org/10.1007/s10260-018-0427-1
  File ‘DiSSMod.Rd’:
    https://doi.org/10.1007/s10260-018-0427-1
  File ‘DoctorRWM.Rd’:
    https://doi.org/10.1002/jae.680
    https://doi.org/10.1007/s10260-018-0427-1
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
DiSSMod         6.860  0.102  11.211
coef.DiSSMod    6.926  0.003  11.697
summary.DiSSMod 6.822  0.010   8.896
plot.DiSSMod    6.768  0.000   9.298
confint.DiSSMod 6.630  0.012   8.680
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dht2.R’
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
distance_raster 11.296  0.173  15.226
Maintainer: ‘Herve Abdi <herve@utdallas.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Derek",
                      family = "Beaton",
                      role = c("aut", "com", "ctb")),
               person(given = "Herve",
                      family = "Abdi",
                      role = c("aut", "cre"),
                      email = "herve@utdallas.edu"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DistatisR-package.Rd: prettyGraphs
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
File ‘distcomp/libs/distcomp.so’:
  Found non-API call to R: ‘NAMED’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Odile Sauzet <odile.sauzet@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Odile",
                    family = "Sauzet",
                    role = c("aut", "cre"),
                    email = "odile.sauzet@uni-bielefeld.de")
as necessary.

The Description field contains
  <arXiv:1809.03279> for more information.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Zhiqiu Hu <zhiqiu.hu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhiqiu",
                      family = "Hu",
                      role = c("aut", "cre"),
                      email = "zhiqiu.hu@gmail.com"),
               person(given = "Rong-cai",
                      family = "Yang",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
tibber 5.602      0   7.889
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dev_package.R’
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dapply.Rd:27-30: Lost braces
    27 | udf <- function(x){
       |                   ^
Maintainer: ‘Christopher Casement <casementc@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dists.Rd: betareg
  moments.Rd: betareg, gamlss, bamlss
  plot_dist.Rd: gamlss, bamlss, betareg, ggplot2
  plot_moments.Rd: gamlss, bamlss, betareg
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plot_moments 4.997  0.087   5.874
moments      4.464  0.154   5.852
Maintainer: ‘Abbas Parchami <parchami@uk.ac.ir>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Abbas",
                    family = "Parchami",
                    role = c("aut", "cre"),
                    email = "parchami@uk.ac.ir",
                    comment = "Department of Statistics, Faculty of Mathematics and Computer, Shahid Bahonar University of Kerman, Kerman, Iran")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mixture.R’
Maintainer: ‘Florian Lerch <lerch@mathematik.uni-marburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Florian",
                      family = "Lerch",
                      role = c("aut", "cre"),
                      email = "lerch@mathematik.uni-marburg.de"),
               person(given = "Jorn",
                      family = "Lotsch",
                      role = "aut"),
               person(given = "Alfred",
                      family = "Ultsch",
                      role = "aut"))
as necessary.
Maintainer: ‘Ruben Dewitte <ruben0dewitte@gmail.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘fit_US_cities.Rd’:
    http://doi.org/10.3886/E113328V1
Maintainer: ‘Ning Cui <2433971953@qq.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ning",
                      family = "Cui",
                      role = c("aut", "cre"),
                      email = "2433971953@qq.com"),
               person(given = "Maoyuan",
                      family = "Zhou",
                      role = "ctb"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
MLEstimator 4.925  0.009   6.153
Maintainer: ‘Nelson Rayl <nelsonrayl14@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  <arXiv:1311.6139>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dmrcoef-class.Rd: dgCMatrix-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
IllustLLN 5.187  0.129   6.697
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  mock-db-methods.Rd: dbConnect, dbListFields, dbWriteTable,
    dbRemoveTable, dbGetInfo, dbQuoteIdentifier
  mockdb.Rd: dbConnect
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
scatterHex  12.383  0.047  15.959
freqPlot     9.382  0.126  10.837
scatterPlot  7.841  0.051   9.162
yPlot        6.655  0.012   7.470
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
tabinate 5.347  0.045   6.168
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
accum_sp_hill  6.043  0.058   6.577
ent_sp_simpson 3.831  0.114   5.238
Maintainer: ‘Daniel Laydon <d.laydon@imperial.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Daniel", "J."),
                      family = "Laydon",
                      role = "aut"),
               person(given = "Aaron",
                      family = "Sim",
                      role = "aut"),
               person(given = c("Charles", "R.M."),
                      family = "Bangham",
                      role = "aut"),
               person(given = "Becca",
                      family = "Asquith",
                      role = "aut"),
               person(given = "Daniel",
                      family = "Laydon",
                      role = "cre",
                      email = "d.laydon@imperial.ac.uk"))
as necessary.
Maintainer: ‘Sean A. S. Anderson <sean.as.anderson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Sean", "A.", "S."),
                      family = "Anderson",
                      role = c("aut", "cre"),
                      email = "sean.as.anderson@gmail.com"),
               person(given = c("Jason", "T."),
                      family = "Weir",
                      role = "aut"))
as necessary.
Maintainer: ‘Miguel R. Guevara <miguel.guevara@upla.cl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Miguel", "R."),
                      family = "Guevara",
                      role = c("aut", "cre"),
                      email = "miguel.guevara@upla.cl"),
               person(given = "Dominik",
                      family = "Hartmann",
                      role = "aut",
                      email = "d.hartmann@uni-hohenheim.de"),
               person(given = "Marcelo",
                      family = "Mendoza",
                      role = "aut",
                      email = "marcelo.mendoza@usm.cl"))
as necessary.

Problems when reading CITATION file:
  It is recommended to use ‘given’ instead of ‘middle’.
Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
load.data 7.29  0.066   9.583
Maintainer: ‘Christopher T. Kenny <christopherkenny@fas.harvard.edu>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
bandit 8.759  0.217  13.743
Maintainer: ‘Marcelino de la Cruz Rot <marcelino.delacruz@urjc.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Marcelino", "de", "la", "Cruz"),
                      family = "Rot",
                      role = c("aut", "cre"),
                      email = "marcelino.delacruz@urjc.es"),
               person(given = c("Philip", "M."),
                      family = "Dixon",
                      role = "aut"))
as necessary.
Maintainer: ‘Olisaeloka Nsonwu <olisa.nsonwu@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Olisaeloka",
                    family = "Nsonwu",
                    role = c("aut", "cre"),
                    email = "olisa.nsonwu@gmail.com")
as necessary.
Maintainer: ‘Dong-Joon Lim <tgno3.com@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dong-Joon",
                      family = "Lim",
                      role = c("aut", "cre"),
                      email = "tgno3.com@gmail.com"),
               person(family = "Ph.D.",
                      role = "aut",
                      email = "technometrics.org"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
map.soa.sf 4.886  0.004   5.429
Maintainer: ‘Haydar Demirhan <haydar.demirhan@rmit.edu.au>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Haydar",
                    family = "Demirhan",
                    role = c("aut", "cre", "cph"),
                    email = "haydar.demirhan@rmit.edu.au",
                    comment = c(ORCID = "0000-0002-8565-4710"))
as necessary.
Maintainer: ‘Hamed Haseli Mashhadi <hamedhaseli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Hamed", "Haseli"),
                    family = "Mashhadi",
                    role = c("aut", "cre"),
                    email = "hamedhaseli@gmail.com")
as necessary.
Maintainer: ‘Shijia Zhang <zsj27@mail.ustc.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Shijia", "Zhang;", "Meng"),
                      family = "Li",
                      role = "aut"),
               person(given = "Shijia",
                      family = "Zhang",
                      role = "cre",
                      email = "zsj27@mail.ustc.edu.cn"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
dlvs       5.709  0.090   6.751
dl         4.738  0.093   6.078
dlanalysis 4.629  0.028   6.026
Maintainer: ‘Jan Wijffels <jwijffels@bnosac.be>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jan",
                      family = "Wijffels",
                      role = c("aut", "cre"),
                      email = "jwijffels@bnosac.be"),
               person(family = "BNOSAC",
                      role = "aut"),
               person(given = "Davis",
                      family = "King",
                      role = "aut"),
               person(given = c("dlib", "package"),
                      family = "authors",
                      role = "aut",
                      comment = "see file AUTHORS"))
as necessary.
Maintainer: ‘Zijian Guo <zijguo@stat.rutgers.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Wei",
                      family = "Yuan",
                      role = "aut"),
               person(given = "Zhenyu",
                      family = "Wang",
                      role = "aut"),
               person(given = "Zijian",
                      family = "Guo",
                      role = c("aut", "cre"),
                      email = "zijguo@stat.rutgers.edu"),
               person(given = "Cun-Hui",
                      family = "Zhang",
                      role = "aut"))
as necessary.

The Description field contains
  <arxiv:1907.12732>. It constructs the confidence interval for the
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
     user system elapsed
DLL 4.596  0.046   6.872
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    Changes to previous versions
    Minor changes
    Fixes
    Previous Versions
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  compare_category.data.frame.Rd: tbl_df
  compare_numeric.data.frame.Rd: tbl_df
  correlate.data.frame.Rd: grouped_df
  describe.data.frame.Rd: tbl_df, grouped_df, group_by
  describe.tbl_dbi.Rd: group_by
  diagnose.data.frame.Rd: tbl_df, grouped_df
  diagnose_category.data.frame.Rd: tbl_df, grouped_df
  diagnose_numeric.data.frame.Rd: tbl_df, grouped_df
  diagnose_outlier.data.frame.Rd: tbl_df, grouped_df
  diagnose_paged_report.data.frame.Rd: tbl_df
  diagnose_report.data.frame.Rd: tbl_df
  diagnose_sparese.data.frame.Rd: tbl_df
  diagnose_web_report.data.frame.Rd: tbl_df
  eda_paged_report.data.frame.Rd: tbl_df
  eda_report.data.frame.Rd: tbl_df
  eda_web_report.data.frame.Rd: tbl_df
  find_na.Rd: tbl_df
  find_outliers.Rd: tbl_df
  find_skewness.Rd: tbl_df
  imputate_na.Rd: tbl_df
  imputate_outlier.Rd: tbl_df
  normality.data.frame.Rd: tbl_df, group_by
  normality.tbl_dbi.Rd: group_by
  overview.Rd: tbl_df
  plot_bar_category.data.frame.Rd: tbl_df, grouped_df
  plot_box_numeric.data.frame.Rd: tbl_df, grouped_df
  plot_correlate.data.frame.Rd: tbl_df
  plot_hist_numeric.data.frame.Rd: tbl_df, grouped_df
  plot_normality.data.frame.Rd: tbl_df
  plot_outlier.data.frame.Rd: tbl_df
  plot_qq_numeric.data.frame.Rd: tbl_df, grouped_df
  target_by.data.frame.Rd: tbl_df, grouped_df
  target_by.tbl_dbi.Rd: grouped_df
  transformation_paged_report.Rd: tbl_df
  transformation_report.Rd: tbl_df
  transformation_web_report.Rd: tbl_df
  univar_category.data.frame.Rd: tbl_df
  univar_numeric.data.frame.Rd: tbl_df
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                               user system elapsed
plot_bar_category.data.frame 12.627  0.120  19.825
plot.pps                      4.401  0.080   5.640
plot.optimal_bins             3.911  0.066   5.202
Maintainer: ‘Alessandro Magrini <alessandro.magrini@unifi.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alessandro",
                    family = "Magrini",
                    role = c("aut", "cre"),
                    email = "alessandro.magrini@unifi.it")
as necessary.
Maintainer: ‘Hana Sevcikova <hanas@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Tyler", "H."),
                      family = "McCormick",
                      role = "aut"),
               person(given = "Adrian",
                      family = "Raftery",
                      role = "aut"),
               person(given = "David",
                      family = "Madigan",
                      role = "aut"),
               person(given = "Sevvandi",
                      family = "Kandanaarachchi",
                      role = c("ctb", "aut")),
               person(given = "Hana",
                      family = "Sevcikova",
                      role = c("ctb", "aut", "cre"),
                      email = "hanas@uw.edu"))
as necessary.
checkRd: (-1) dma.Rd:47: Lost braces; missing escapes or markup?
    47 | When y_t is controlled, only y_{t-delay-1} and before 
       |                                ^
checkRd: (-1) dma.Rd:64: Lost braces; missing escapes or markup?
    64 |                  estimate of theta_{j-1} for model k at t}
       |                                    ^
checkRd: (-1) dma.Rd:66: Lost braces; missing escapes or markup?
    66 |                  variance of theta_{j-1} for model k at t}
       |                                    ^
checkRd: (-1) dma.Rd:68: Lost braces; missing escapes or markup?
    68 |                  estimate of theta_{j-1} at t}
       |                                    ^
checkRd: (-1) dma.Rd:70: Lost braces; missing escapes or markup?
    70 |                  variance of thetahat_{j-1} at t}
       |                                       ^
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
AUC_IF         6.965  0.088   8.320
AUC_comparison 5.589  0.004   6.152
Maintainer: ‘Corinne Emmenegger <emmenegger@stat.math.ethz.ch>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Description field contains
  Learning in Partially Linear Endogenous Models" <arXiv:2101.12525> and
  Emmenegger and Buehlmann (2021) <arXiv:2108.13657> "Double Machine
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Yuan Tang <terrytangyuan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuan",
                      family = "Tang",
                      role = c("aut", "cre"),
                      email = "terrytangyuan@gmail.com"),
               person(given = "Gao",
                      family = "Tao",
                      role = "aut",
                      email = "joegaotao@gmail.com"),
               person(given = "Xiao",
                      family = "Nan",
                      role = "aut",
                      email = "road2stat@gmail.com"))
as necessary.
checkRd: (-1) dca.Rd:24: Lost braces; missing escapes or markup?
    24 | \eqn{neglinks_{ij} = 1} means chunklet \code{i} and chunklet {j}
       |                                                              ^
checkRd: (-1) dca.Rd:26: Lost braces; missing escapes or markup?
    26 | \eqn{neglinks_{ij} = 0} means chunklet \code{i} and chunklet {j}
       |                                                              ^
checkRd: (-1) rca.Rd:57: Lost braces; missing escapes or markup?
    57 |       e.g. {1, 3, 7} and {4, 6}, might belong to the
       |            ^
checkRd: (-1) rca.Rd:57: Lost braces; missing escapes or markup?
    57 |       e.g. {1, 3, 7} and {4, 6}, might belong to the
       |                          ^
Maintainer: ‘Daniel Kaschek <daniel.kaschek@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Daniel",
                    family = "Kaschek",
                    role = c("aut", "cre"),
                    email = "daniel.kaschek@gmail.com")
as necessary.
checkRd: (-1) scale_color_dMod.Rd:10: Lost braces
    10 | \item{...}{arguments goint to code{scale_color_manual()}}
       |                                   ^
checkRd: (-1) scale_fill_dMod.Rd:10: Lost braces
    10 | \item{...}{arguments goint to code{scale_color_manual()}}
       |                                   ^
checkRd: (-1) trust.Rd:103: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:104: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:105: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:106: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:107-108: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:109-110: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:111-112: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:113-114: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:115-122: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:123-126: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:127: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:128-131: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:132-133: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:134-135: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:136-138: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) trust.Rd:139-141: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plotPrediction 4.637  0.008   6.825
plotData       4.511  0.004   6.297
plotCombined   4.483  0.007   6.685
as.parframe    4.290  0.074   5.036
parlist        4.097  0.004   5.712
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  EstimateDMQ.rd: DEoptim
  fn.DEoptim.Rd: DEoptim
  fn.solnp.Rd: solnp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
rows-dm 6.194  0.024   7.561
'library' or 'require' call not declared from: ‘tidyverse’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  tractography.Rd: rgl
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
DMRnet 4.87  0.011   6.743
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
estimate_cdf 4.685  0.175    6.25
Maintainer: ‘Luis Torgo <ltorgo@dcc.fc.up.pt>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) outliers.ranking.Rd:142: Lost braces; missing escapes or markup?
   142 |   max ( 0, ( |g_{y,i}| - |g_{x,i}| ) / ( |g_{y,i}| + |g_{x,i}| ) ),
       |                 ^
checkRd: (-1) outliers.ranking.Rd:142: Lost braces; missing escapes or markup?
   142 |   max ( 0, ( |g_{y,i}| - |g_{x,i}| ) / ( |g_{y,i}| + |g_{x,i}| ) ),
       |                             ^
checkRd: (-1) outliers.ranking.Rd:142: Lost braces; missing escapes or markup?
   142 |   max ( 0, ( |g_{y,i}| - |g_{x,i}| ) / ( |g_{y,i}| + |g_{x,i}| ) ),
       |                                             ^
checkRd: (-1) outliers.ranking.Rd:142: Lost braces; missing escapes or markup?
   142 |   max ( 0, ( |g_{y,i}| - |g_{x,i}| ) / ( |g_{y,i}| + |g_{x,i}| ) ),
       |                                                         ^
checkRd: (-1) outliers.ranking.Rd:143: Lost braces; missing escapes or markup?
   143 |   where g_{y,i} and g_{x,i} are the two groups involved in the merge at
       |           ^
checkRd: (-1) outliers.ranking.Rd:143: Lost braces; missing escapes or markup?
   143 |   where g_{y,i} and g_{x,i} are the two groups involved in the merge at
       |                       ^
checkRd: (-1) outliers.ranking.Rd:144: Lost braces; missing escapes or markup?
   144 |   step i, and g_{x,i} is the group which X belongs to. Note that if X
       |                 ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  kNN.Rd: knn, knn1, knn.cv
  rpartXse.Rd: rpart, prune.rpart
  rt.prune.Rd: rpart, prune.rpart
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
checkRd: (-1) setCPT.O.Rd:85: Lost braces; missing escapes or markup?
    85 | statespace {0,1,2}, which this is *not* checked anywhere. Thus, if
       |            ^
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
qqpeak                  12.387  0.016  15.228
prequential.score       11.770  0.075  14.333
DNAmixturesLite-package  6.899  0.043   8.927
boxplot.DNAmixture       6.092  0.046   7.933
map.genotypes            5.807  0.118   7.732
varEst                   5.644  0.028   8.413
Maintainer: ‘Hasinur Rahaman Khan <hasinurkhan@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Faisal",
                      family = "Ababneh",
                      role = "aut"),
               person(given = "John",
                      family = "Robinson",
                      role = "aut"),
               person(given = c("Lars", "S"),
                      family = "Jermiin",
                      role = "aut"),
               person(given = c("Hasinur", "Rahaman"),
                      family = "Khan",
                      role = c("aut", "cre"),
                      email = "hasinurkhan@gmail.com"))
as necessary.
Maintainer: ‘Mikkel Meyer Andersen <mikl@math.aau.dk>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Specified C++11: please drop specification unless essential
Maintainer: ‘Qingyang Zhang <qz008@uark.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Qingyang",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "qz008@uark.edu")
as necessary.
Maintainer: ‘Jiayue Zeng <zengjiayue@126.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Zhilong Jia <zhilongjia@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  deepAFT.Rd: survreg
  deepSurv.Rd: survreg
  dnn-package.Rd: coxph, survival
  print.Rd: survreg
  survfit.deepAFT.Rd: survfit
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dnr.Rd:12: Escaped LaTeX specials: \#
Examples with CPU (user + system) or elapsed time > 5s
             user system elapsed
paramVertex 5.824   0.29    7.01
checkRd: (-1) beetle.Rd:13: Lost braces; missing escapes or markup?
    13 |     \item{\code{x}}{dose (log base 10 CS2mgl^{-1})}
       |                                              ^
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
response_plot 7.732  0.098  11.543
plot_lm       4.035  0.055   6.661
Maintainer: ‘Mike Yeomans <mk.yeomans@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Mike",
                    family = "Yeomans",
                    role = c("aut", "cre"),
                    email = "mk.yeomans@gmail.com")
as necessary.
Maintainer: ‘Jan Wijffels <jwijffels@bnosac.be>’

The Description field contains
  available at <arXiv:1405.4053>.  The package also provides an
  Topics' by D. Angelov available at <arXiv:2008.09470>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
top2vec 3.611  0.369   5.352
Maintainer: ‘Ben Artin <ben@artins.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ben",
                    family = "Artin",
                    role = c("aut", "cre"),
                    email = "ben@artins.org")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  to_miniature.Rd: image_border, pdf_convert, image_read
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Andreas Rappold <arappold@gmx.at>’

Found the following (possibly) invalid file URIs:
  URI: ./misc/workflow.dot.pdf
    From: README.md
  URI: ./misc/nint.dot.pdf
    From: README.md
Maintainer: ‘Danail Obreschkow <danail.obreschkow@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Danail",
                    family = "Obreschkow",
                    role = c("aut", "cre"),
                    email = "danail.obreschkow@gmail.com")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  checks.Rd: rcmdcheck
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Carl Ganz <carl@cannadatasolutions.com>’

Found the following (possibly) invalid file URIs:
  URI: CONDUCT.md
    From: README.md
  URI: CONTRIBUTE.md
    From: README.md
Examples with CPU (user + system) or elapsed time > 5s
                         user system elapsed
dodgr_isodists          5.638  0.282   4.755
dodgr_sample            5.568  0.307   2.180
dodgr_to_igraph         5.485  0.342   2.269
dodgr_dists_categorical 5.479  0.293   2.487
dodgr_contract_graph    5.439  0.301   2.391
Examples with CPU time > 2.5 times elapsed time
                 user system elapsed ratio
dodgr_sample    5.568  0.307   2.180 2.695
dodgr_to_igraph 5.485  0.342   2.269 2.568
Maintainer: ‘Ulrike Groemping <ulrike.groemping@bht-berlin.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Ulrike",
                    family = "Groemping",
                    role = c("aut", "cre"),
                    email = "ulrike.groemping@bht-berlin.de")
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  functionsFromDoEbase.Rd: DoE.base
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Elodie Persyn <elodie.persyn@univ-nantes.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Elodie",
                    family = "Persyn",
                    role = c("aut", "cre"),
                    email = "elodie.persyn@univ-nantes.fr")
as necessary.
Maintainer: ‘Mustafa CAVUS <mustafacavus@eskisehir.edu.tr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Mustafa",
                      family = "CAVUS",
                      role = c("aut", "cre"),
                      email = "mustafacavus@eskisehir.edu.tr"),
               person(given = "Berna",
                      family = "YAZICI",
                      role = "aut"))
as necessary.

Found the following (possibly) invalid URLs:
  URL: do:10.2307/1267501
    From: DESCRIPTION
    Message: Invalid URI scheme
Maintainer: ‘Juan Julián Merelo-Guervós <jjmerelo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Juan", "Julián"),
                    family = "Merelo-Guervós",
                    role = c("aut", "cre"),
                    email = "jjmerelo@gmail.com")
as necessary.

The Description field contains
  used in Merelo (2022) <arXiv:2209.07334>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bootAverageDominanceAnalysis.Rd: boot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
dominanceanalysis-package 4.973  0.155   6.573
dominanceAnalysis         3.523  0.059   5.438
checkRd: (-1) py_select_interpreter.Rd:5: Lost braces; missing escapes or markup?
     5 | \title{Tell {reticulate} to use Python Conda version available on Domino Data Lab.}
       |             ^
Maintainer: ‘Nick Elprin <nick@dominodatalab.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jacek",
                      family = "Glodek",
                      role = "aut",
                      email = "jacek@theiterators.com"),
               person(given = "Nick",
                      family = "Elprin",
                      role = "cre",
                      email = "nick@dominodatalab.com"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘domino-package.Rd’:
    \keyword{domino,}
    \keyword{package,}
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
dkmap  5.181  0.065   6.295
dne    4.609  0.101   5.153
dkcrop 4.071  0.088   5.082
Found the following calls to attach():
File ‘doParallel/R/doParallel.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Maintainer: ‘B. W. Lewis <blewis@illposed.net>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("B.", "W."),
                    family = "Lewis",
                    role = c("aut", "cre"),
                    email = "blewis@illposed.net")
as necessary.
checkRd: (-1) redisWorker.Rd:56: Lost braces; missing escapes or markup?
    56 | You can increase it by including a {timeout=n} argument value.
       |                                    ^
checkRd: (-1) startLocalWorkers.Rd:54: Lost braces; missing escapes or markup?
    54 | You can increase it by including a {timeout=n} argument value.
       |                                    ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  redisDelete.Rd: hiredis
  redisGet.Rd: hiredis
  redisSet.Rd: hiredis
  registerDoRedis.Rd: foreach
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Problems with news in ‘NEWS.md’:
  Cannot extract version info from the following section titles:
    New features
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
optimum_param    6.554  0.189   6.718
plot.doremiparam 6.257  0.117   6.338
analyze.2order   5.381  0.115   7.023
Maintainer: ‘Paul Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Paul", "R."),
                      family = "Rosenbaum",
                      role = "aut"),
               person(given = "Paul",
                      family = "Rosenbaum",
                      role = "cre",
                      email = "rosenbaum@wharton.upenn.edu"))
as necessary.
Maintainer: ‘T. Schmelter <thomas.schmelter@bayer.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "F.",
                      family = "Mendolia",
                      role = "aut"),
               person(given = "K.",
                      family = "Walkamp",
                      role = "aut"),
               person(given = "K.",
                      family = "Roth",
                      role = "aut"),
               person(given = "T.",
                      family = "Schmelter",
                      role = c("aut", "cre"),
                      email = "thomas.schmelter@bayer.com"),
               person(given = "C.",
                      family = "Neumann",
                      role = "aut"),
               person(given = "Z.",
                      family = "Gao",
                      role = "aut"),
               person(given = "A.",
                      family = "Kaiser",
                      role = "aut"),
               person(given = "S.",
                      family = "Jeske",
                      role = "aut"),
               person(given = "H.",
                      family = "Kulmann",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
bMCTtest 5.081  0.102   6.995
Maintainer: ‘Jeffrey Zhang <jzhang17@wharton.upenn.edu>’

The Description field contains
  outcomes as described in Zhang, Small, Heng (2024) <arXiv:2401.06909>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
dose_sensitivity_mc_gen 11.628  0.103  16.893
Found the following calls to attach():
File ‘doSNOW/R/doSNOW.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Maintainer: ‘Erik Thorsén <erik.thorsen@math.su.se>’

The Description field contains
  (<arXiv:2106.02131>).  Two dynamic shrinkage estimators are available
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Paul Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Paul", "R."),
                      family = "Rosenbaum",
                      role = "aut"),
               person(given = "Paul",
                      family = "Rosenbaum",
                      role = "cre",
                      email = "rosenbaum@wharton.upenn.edu"))
as necessary.
Maintainer: ‘Andrew Redd <Andrew.Redd@hsc.utah.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrew",
                    family = "Redd",
                    role = c("aut", "cre"),
                    email = "Andrew.Redd@hsc.utah.edu")
as necessary.
Maintainer: ‘Jean-Mathieu Potvin <jm@potvin.xyz>’

The BugReports field in DESCRIPTION has
  https://github.com/jeanmathieupotvin/dotprofile/issues/new
which should likely be
  https://github.com/jeanmathieupotvin/dotprofile/issues/new/issues
instead.
Maintainer: ‘E. F. Haghish <haghish@imbi.uni-freiburg.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("E.", "F."),
                    family = "Haghish",
                    role = c("aut", "cre"),
                    email = "haghish@imbi.uni-freiburg.de")
as necessary.

The BugReports field in DESCRIPTION has
  http://github.com/haghish/DOT
which should likely be
  http://github.com/haghish/DOT/issues
instead.
Found the following files/directories:
  ‘myfile.ps’ ‘myfile.svg’
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
dots 8.635  0.163  11.241
Examples with CPU (user + system) or elapsed time > 5s
                 user system elapsed
dots_and_violin 8.287  0.202  10.808
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘dwplot.R’
Maintainer: ‘James McVittie <james.mcvittie@mail.mcgill.ca>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "James",
                    family = "McVittie",
                    role = c("aut", "cre"),
                    email = "james.mcvittie@mail.mcgill.ca")
as necessary.
Maintainer: ‘Mary C Meyer <meyer@stat.colostate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Mary", "C"),
                      family = "Meyer",
                      role = c("aut", "cre"),
                      email = "meyer@stat.colostate.edu"),
               person(given = "Bodhisattva",
                      family = "Sen",
                      role = "aut"))
as necessary.

Found the following (possibly) invalid file URI:
  URI: www.kentuckyderby.com
    From: man/derby.Rd
Maintainer: ‘Sean Ruddy <s.ruddy@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Sean",
                    family = "Ruddy",
                    role = c("aut", "cre"),
                    email = "s.ruddy@yahoo.com")
as necessary.
Maintainer: ‘Maria Dolores Martinez-Miranda <mmiranda@ugr.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "M.L.",
                      family = "Gamiz",
                      role = "aut"),
               person(given = "E.",
                      family = "Mammen",
                      role = "aut"),
               person(given = "M.D.",
                      family = "Martinez-Miranda",
                      role = "aut"),
               person(given = "J.P.",
                      family = "Nielsen",
                      role = "aut"),
               person(given = c("Maria", "Dolores"),
                      family = "Martinez-Miranda",
                      role = "cre",
                      email = "mmiranda@ugr.es"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
dove2 3.631  0.103   5.071
Maintainer: ‘Dinesh Acharya <dines.acharya@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Dinesh",
                    family = "Acharya",
                    role = c("aut", "cre"),
                    email = "dines.acharya@gmail.com")
as necessary.
checkRd: (-1) downscale.Rd:9: Lost braces; missing escapes or markup?
     9 | \item{occupancies}{Either a data frame containing two columns or an object of class \code{"upgrain"} from the \code{\link{upgrain}} function. If using a data frame the first column must be the grain sizes (cell area in squared units e.g. km^{2}). The second column is the proportion of occupancies at each grain size.}
       |                                                                                                                                                                                                                                                  ^
checkRd: (-1) ensemble.downscale.Rd:13: Lost braces; missing escapes or markup?
    13 | \item{new.areas}{vector of grain sizes (in squared units e.g. km^{2}) for which area of occupancy will be predicted.}
       |                                                                  ^
checkRd: (-1) hui.downscale.Rd:13: Lost braces; missing escapes or markup?
    13 | \item{new.areas}{vector of grain sizes as cell area (in same units as cell.width but squared e.g. km^{2}) at fine scales for model prediction.}
       |                                                                                                      ^
checkRd: (-1) predict.downscale.Rd:10: Lost braces; missing escapes or markup?
    10 | \item{new.areas}{vector of grain sizes (in squared units e.g. km^{2}) for which area of occupancy will be predicted.}
       |                                                                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  downscale.Rd: mpfr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
upgrain.threshold 4.638      0   5.199
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
preview_pal        9.007  0.201  12.121
preview_doypa_pals 3.820  0.121   6.549
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
dpa           6.035  0.016   6.692
ggplot.effect 5.867  0.008   7.104
plot.effect   5.015  0.007   6.308
effect        4.983  0.008   5.073
sum.effect    4.769  0.001   5.668
add.ci        4.706  0.050   5.204
Maintainer: ‘Lin Zhang <lin.zhang@cumt.edu.cn>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lin",
                    family = "Zhang",
                    role = c("aut", "cre"),
                    email = "lin.zhang@cumt.edu.cn")
as necessary.

File 'R/DPBBM-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Maintainer: ‘Bingyuan Zhang <zhang@sigmath.es.osaka-u.ac.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Bingyuan",
                      family = "Zhang",
                      role = c("aut", "cre"),
                      email = "zhang@sigmath.es.osaka-u.ac.jp"),
               person(given = "Jie",
                      family = "Chen",
                      role = "aut"),
               person(given = "Yoshikazu",
                      family = "Terada",
                      role = "aut"))
as necessary.
Maintainer: ‘Harry Joo <harryjoo19@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Harry",
                      family = "Joo",
                      role = c("aut", "cre"),
                      email = "harryjoo19@gmail.com"),
               person(given = "Herman",
                      family = "Aguinis",
                      role = c("aut", "dtc")),
               person(given = c("Kyle", "J."),
                      family = "Bradley",
                      role = "aut"),
               person(given = "Takuya",
                      family = "Noguchi",
                      role = "ctb"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dpkg_release_gh.R’ ‘read_dpkg.Rd’ ‘stow.R’ ‘stow.Rd’
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
chron.ars 4.705  0.097   6.026
File ‘dplyr/libs/dplyr.so’:
  Found non-API calls to R: ‘LEVELS’, ‘OBJECT’, ‘PRVALUE’,
    ‘R_shallow_duplicate_attr’, ‘Rf_allocSExp’, ‘SET_PRCODE’,
    ‘SET_PRENV’, ‘SET_PRVALUE’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Maintainer: ‘Christopher Gandrud <christopher.gandrud@gmail.com>’

Found the following (possibly) invalid file URI:
  URI: LICENSE.md
    From: README.md
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  datapackage_init.Rd: toJSON, export
  datapackage_install.Rd: import
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘David J. H. Shih <djh.shih@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yanxun",
                      family = "Xu",
                      role = "aut"),
               person(given = "Peter",
                      family = "Mueller",
                      role = "aut"),
               person(given = "Donatello",
                      family = "Telesca",
                      role = "aut"),
               person(given = c("David", "J.", "H."),
                      family = "Shih",
                      role = c("aut", "cre"),
                      email = "djh.shih@gmail.com"))
as necessary.
'library' or 'require' call not declared from: ‘devtools’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘expm1x.Rd’ ‘pnt.Rd’ ‘pt_Witkovsky_Tab1.Rd’
Examples with CPU (user + system) or elapsed time > 5s
      user system elapsed
p1l1 4.356  0.024   5.734
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
movie 4.007  0.153   5.256
checkRd: (-1) confint.dr4pl.Rd:49: Escaped LaTeX specials: \&
checkRd: (-1) gof-dr4pl.Rd:40: Escaped LaTeX specials: \&
checkRd: (-1) vcov.dr4pl.Rd:61: Escaped LaTeX specials: \&
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
dictionaryHandling 0.739  0.034   5.906
Examples with CPU time > 2.5 times elapsed time
                user system elapsed ratio
plotSpiderWebs 1.182  0.064   0.482 2.585
Maintainer: ‘Richard Wen <rrwen.dev@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Richard",
                    family = "Wen",
                    role = c("aut", "cre"),
                    email = "rrwen.dev@gmail.com")
as necessary.
Found the following files/directories:
  ‘drawBox.pdf’ ‘drawCircle.pdf’ ‘drawCurve.pdf’ ‘drawLine.pdf’
  ‘drawPoint.pdf’ ‘drawSettingsExample.pdf’ ‘drawText.pdf’ ‘export.pdf’
Maintainer: ‘Kubra Atalay Kabasakal <katalay@hacettepe.edu.tr>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Martin Wiegand <Martin.Wiegand@manchester.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Martin",
                    family = "Wiegand",
                    role = c("aut", "cre"),
                    email = "martin.wiegand@manchester.ac.uk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
drayl4D 6.669  0.005   8.775
Maintainer: ‘Christian Ritz <ritz@bioassay.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Christian",
                      family = "Ritz",
                      role = c("aut", "cre"),
                      email = "ritz@bioassay.dk"),
               person(given = c("Jens", "C."),
                      family = "Strebig",
                      role = "aut",
                      email = "streibig@bioassay.dk"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) EDcomp.Rd:88: Escaped LaTeX specials: \&
checkRd: (-1) LL.4.Rd:44: Escaped LaTeX specials: \&
checkRd: (-1) W4.Rd:37: Escaped LaTeX specials: \&
checkRd: (-1) algae.Rd:32: Escaped LaTeX specials: \&
checkRd: (-1) anova.drc.Rd:40: Escaped LaTeX specials: \&
checkRd: (-1) deguelin.Rd:33: Escaped LaTeX specials: \&
checkRd: (-1) gompertz.Rd:55: Escaped LaTeX specials: \&
checkRd: (-1) hatvalues.drc.Rd:43: Lost braces
    43 |   emph{Generalized Linear Models}, 
       |       ^
checkRd: (-1) hatvalues.drc.Rd:44: Escaped LaTeX specials: \&
checkRd: (-1) llogistic.Rd:64: Escaped LaTeX specials: \&
checkRd: (-1) modelFit.Rd:36: Escaped LaTeX specials: \&
checkRd: (-1) weibull1.Rd:67: Escaped LaTeX specials: \&
Maintainer: ‘Andrea Onofri <andrea.onofri@unipg.it>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Andrea",
                    family = "Onofri",
                    role = c("aut", "cre"),
                    email = "andrea.onofri@unipg.it")
as necessary.
checkRd: (-1) excalibur.Rd:18: Lost braces; missing escapes or markup?
    18 |     \item{\code{GR}}{a numeric vector: germination rates in d^{-1}}
       |                                                               ^
checkRd: (-1) festuca.Rd:16: Lost braces; missing escapes or markup?
    16 |     \item{\code{GR}}{a numeric vector: germination rates in d^{-1}}
       |                                                               ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  ED.drcte.Rd: drm
  drmte.Rd: LL.4, LL.5, W1.4, getMeanFunctions, drmc
  drmteControl.Rd: drm
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
drdid 5.664  0.374    8.16
Maintainer: ‘Katharina Baum <katharina.baum@hpi.de>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
checkRd: (-1) generate_individual_graphs.Rd:11: Lost braces
    11 | code{\link[DrDimont]{compute_correlation_matrices}}}
       |     ^
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
compute_correlation_matrices 7.427  0.358  10.469
Maintainer: ‘Hamed Haselimashhadi <hamedhaseli@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hamed",
                    family = "Haselimashhadi",
                    role = c("aut", "cre"),
                    email = "hamedhaseli@gmail.com",
                    comment = "www.hamedhaseli.webs.com")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
dregar2 6.645  0.082   9.777
Maintainer: ‘Loris Michel <michel@stat.math.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Loris",
                      family = "Michel",
                      role = c("aut", "cre"),
                      email = "michel@stat.math.ethz.ch"),
               person(given = "Domagoj",
                      family = "Cevid",
                      role = "aut"))
as necessary.

The Description field contains
  Cevid & Michel & Meinshausen & Buhlmann (2020) <arXiv:2005.14458>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
checkRd: (-1) predict.drf.Rd:30-31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:32-33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:34-35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:36-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:38-39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:40-41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:42-43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.drf.Rd:44: Lost braces in \itemize; meant \describe ?
Maintainer: ‘Johan Zetterqvist <drjohanzetterqvist@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Johan",
                      family = "Zetterqvist",
                      role = c("aut", "cre"),
                      email = "drjohanzetterqvistatgmail.com"),
               person(given = c("Arvid", "Sjölander", "with", "contributions", "from", "Alexander"),
                      family = "Ploner.",
                      role = "aut",
                      email = "arvid.sjolanderatki.se"))
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  findRoots.Rd: nleqslv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
make.data 4.582  0.000   6.720
big.drglm 4.375  0.005   5.711
Maintainer: ‘Alvaro Briz-Redon <alvaro.briz@uv.es>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alvaro",
                    family = "Briz-Redon",
                    role = c("aut", "cre"),
                    email = "alvaro.briz@uv.es")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘goodmap.R’ ‘traits.R’
Maintainer: ‘Emil Sjoerup <emilsjoerup@live.dk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emil",
                    family = "Sjoerup",
                    role = c("aut", "cre"),
                    email = "emilsjoerup@live.dk")
as necessary.
Specified C++11: please drop specification unless essential
Maintainer: ‘Przemyslaw Biecek <przemyslaw.biecek@gmail.com>’

The Description field contains
  of the 'DrWhy.AI' universe (Biecek 2018) <arXiv:1806.08915>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Hanbing Yang <hanbingflying@sina.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hanbing",
                    family = "Yang",
                    role = c("aut", "cre"),
                    email = "hanbingflying@sina.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
lengthWord_probabilities 4.836  0.067  10.508
words_probabilities      2.468  0.012   6.899
failureRate              0.595  0.065   8.435
maintainability          0.511  0.009   7.787
reliability              0.495  0.009   8.550
stationary_distributions 0.415  0.001   5.250
availability             0.304  0.042   7.733
aic.dmm                  0.171  0.014   6.422
getDistribution.dmm      0.156  0.004   7.238
bic.dmm                  0.130  0.008   6.981
simulate.dmm             0.127  0.006   6.455
loglik.dmm               0.124  0.004   7.252
Maintainer: ‘Il-Youp Kwak <ilyoup.kwak@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Il-Youp", "Kwak", "with", "contributions", "from", "Wuming"),
                      family = "Gong",
                      role = "aut"),
               person(given = "Il-Youp",
                      family = "Kwak",
                      role = "cre",
                      email = "ilyoup.kwak@gmail.com"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
print.Edge     4.900  0.004   6.235
summary.Edge   4.872  0.007   6.703
stepEdgeParSel 4.843  0.000   5.960
roofDiff       4.770  0.008   5.695
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
predict_coding_impact 4.263  0.246   7.405
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
drcfit     5.044  0.196   6.556
bmdfilter  5.084  0.050   5.646
RNAseqdata 4.625  0.329   5.356
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
drord 6.948  0.308  11.191
Maintainer: ‘Zengchao Hao <z.hao4univ@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zengchao",
                    family = "Hao",
                    role = c("aut", "cre"),
                    email = "z.hao4univ@gmail.com")
as necessary.
Maintainer: ‘Manjari Das <manjari8d@gmail.com>’

The Description field contains
  Kennedy EH, and Jewell NP (2021) <arXiv:2104.14091>. The estimator is
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
checkRd: (-1) popsize.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) popsize_cond.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
EPsProg23        10.217  0.147  11.971
EPsProg23_binary  9.350  0.015  10.807
Epgo23_binary     7.398  0.035   8.493
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
simulate_chronicvirusir_ode 7.09  0.024   8.396
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
dsa          6.994  0.112   7.882
output       6.967  0.015   8.224
get_sa       6.783  0.071   7.921
get_trend    6.825  0.028   7.778
get_original 6.745  0.102   7.623
Maintainer: ‘Ravi Varadhan <ravi.varadhan@jhu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Ravi",
                      family = "Varadhan",
                      role = c("aut", "cre"),
                      email = "ravi.varadhan@jhu.edu"),
               person(given = "Wenliang",
                      family = "Yao",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
DSBNormalizeProtein  5.744  0.107   8.345
ModelNegativeADTnorm 3.923  0.007   5.617
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘dscore.R’ ‘get_age_equivalent.R’
File ‘dsdp/libs/dsdp.so’:
  Found non-API call to R: ‘Rf_allocSExp’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
test_dsep 2.645  0.148   5.176
Maintainer: ‘Rafael A. Irizarry <rafael_irizarry@dfci.harvard.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Rafael", "A."),
                      family = "Irizarry",
                      role = c("aut", "cre"),
                      email = "rafael_irizarry@dfci.harvard.edu"),
               person(given = "Amy",
                      family = "Gill",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘mice_weights.Rd’
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘QeFairHelpers.R’
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DSLiteConnection-class.Rd: DSConnection-class
  DSLiteDriver-class.Rd: DSDriver-class
  DSLiteResult-class.Rd: DSResult-class
  getDSLiteData.Rd: DSConnection-class
  setupCNSIMTest.Rd: datashield.login
  setupDASIMTest.Rd: datashield.login
  setupDATASETTest.Rd: datashield.login
  setupDISCORDANTTest.Rd: datashield.login
  setupDSLiteServer.Rd: datashield.login
  setupSURVIVALTest.Rd: datashield.login
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Specified C++11: please drop specification unless essential
Maintainer: ‘Laura Marshall <lhm@st-andrews.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("David", "L."),
                      family = "Miller",
                      role = "aut"),
               person(given = "Eric",
                      family = "Rexstad",
                      role = "aut"),
               person(given = "Louise",
                      family = "Burt",
                      role = "aut"),
               person(given = c("Mark", "V."),
                      family = "Bravington",
                      role = "aut"),
               person(given = "Sharon",
                      family = "Hedley",
                      role = "aut"),
               person(given = "Megan",
                      family = "Ferguson",
                      role = "aut"),
               person(given = "Natalie",
                      family = "Kelly.",
                      role = "aut"),
               person(given = "Laura",
                      family = "Marshall",
                      role = "cre",
                      email = "lhm@st-andrews.ac.uk"))
as necessary.
checkRd: (-1) dsm_varprop.Rd:67: Lost braces
    67 | parameter uncertainty. See Wood, Pya & S{\"a}fken (2016) for more
       |                                         ^
checkRd: (-1) dsm_varprop.Rd:100: Lost braces
   100 | Wood, S.N., Pya, N. and S{\"a}fken, B. (2016) Smoothing parameter and model
       |                          ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  check.cols.Rd: mrds
  dsm.cor.Rd: residuals.gam
  dsm_cor.Rd: residuals.gam
  dsm_varprop.Rd: gamObject
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  OpalConnection-class.Rd: DSConnection-class
  OpalDriver-class.Rd: DSDriver-class
  OpalResult-class.Rd: DSResult-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Vathy M. Kamulete <vathymut@gmail.com>’

The Description field contains
  <arXiv:1908.04000>. Modern notions of outlyingness such as trust scores
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Alberto Almuiña <albertogonzalezalmuinha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alberto",
                    family = "Almuiña",
                    role = c("aut", "cre"),
                    email = "albertogonzalezalmuinha@gmail.com")
as necessary.
Maintainer: ‘Emmanuel Arnhold <emmanuelarnhold@yahoo.com.br>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Emmanuel",
                    family = "Arnhold",
                    role = c("aut", "cre"),
                    email = "emmanuelarnhold@yahoo.com.br")
as necessary.

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
Maintainer: ‘Michael Nelson <michael.nelson.r.pkg@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Michael",
                    family = "Nelson",
                    role = c("aut", "cre"),
                    email = "michael.nelson.r.pkg@gmail.com")
as necessary.
Maintainer: ‘Phillip D. Alderman <phillip.alderman@okstate.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Phillip", "D."),
                    family = "Alderman",
                    role = c("aut", "cre"),
                    email = "phillip.alderman@okstate.edu")
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘v_fmt_to_type.R’
Maintainer: ‘Gentry White <gentry.white@qut.edu.au>’

The Description field contains
  in G. White, D. Sun, P. Speckman (2019) <arXiv:1906.05575>. The basic
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Specified C++11: please drop specification unless essential
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
plot.dsspMod 4.825  0.305   6.238
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
Maintainer: ‘Paul R. Rosenbaum <rosenbaum@wharton.upenn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Paul", "R."),
                    family = "Rosenbaum",
                    role = c("aut", "cre"),
                    email = "rosenbaum@wharton.upenn.edu")
as necessary.
Maintainer: ‘Zhibing He <zhibingh@asu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Zhibing",
                    family = "He",
                    role = c("aut", "cre"),
                    email = "zhibingh@asu.edu")
as necessary.
Maintainer: ‘Seunggeun (Shawn) Lee <leeshawn@umich.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Seunggeun",
                      family = "Lee",
                      role = "aut",
                      comment = "Shawn"),
               person(given = "Seunggeun",
                      family = "Lee",
                      role = "cre",
                      email = "leeshawn@umich.edu",
                      comment = "Shawn"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
dSVA 10.261  0.178  12.062
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Onoue.Friberg.Rd: pomp
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Zhicheng Du <dgdzc@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Zhicheng",
                      family = "Du",
                      role = c("aut", "cre"),
                      email = "dgdzc@hotmail.com"),
               person(given = "Yuantao",
                      family = "Hao",
                      role = "aut"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
linComb    5.953  0.193   9.020
nonlinComb 5.132  0.076   7.574
plotComb   5.095  0.076   7.554
mlComb     3.633  0.358   5.566
checkRd: (-1) DTDAcif.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTDAcif.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
         user system elapsed
DTDAcif 5.496  0.006   6.416
Maintainer: ‘Carla Moreira <carlamgmm@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Carla",
                      family = "Moreira",
                      role = c("aut", "cre"),
                      email = "carlamgmm@gmail.com"),
               person(given = "Jacobo",
                      family = "de Uña-Álvarez",
                      role = "aut"),
               person(given = "Rosa",
                      family = "Crujeiras",
                      role = "aut"))
as necessary.
checkRd: (-1) efron.petrosian.Rd:22: Lost braces
    22 |   \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                               ^
checkRd: (-1) lynden.Rd:21: Lost braces
    21 |    \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                                ^
checkRd: (-1) shen.Rd:24: Lost braces
    24 |   \item{error}{ Numeric value. Maximum pointwise error when estimating the density associated to X (f) in two consecutive steps. If this is missing, it is $1e{-06}$.}
       |                                                                                                                                                               ^
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
densityDT 5.628  0.095   7.188
Specified C++11: please drop specification unless essential
Maintainer: ‘William Nicholson<wbnicholson@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "William",
                    family = "Nicholson",
                    role = c("aut", "cre"),
                    email = "wbnicholson@gmail.com")
as necessary.
checkRd: (-1) applied_crm.Rd:64: Lost braces; missing escapes or markup?
    64 | The empiric model is specified as F(d, beta) = d^{exp(beta)}. The logistic model is
       |                                                  ^
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  arrange.dtplyr_step.Rd: arrange
  count.dtplyr_step.Rd: count
  distinct.dtplyr_step.Rd: distinct
  filter.dtplyr_step.Rd: arrange
  group_by.dtplyr_step.Rd: group_by, ungroup
  group_modify.dtplyr_step.Rd: group_map, group_modify
  intersect.dtplyr_step.Rd: union_all
  lazy_dt.Rd: collect, pull, select
  left_join.dtplyr_step.Rd: left_join, right_join, inner_join,
    full_join, anti_join, semi_join
  mutate.dtplyr_step.Rd: mutate
  relocate.dtplyr_step.Rd: relocate
  rename.dtplyr_step.Rd: rename, rename_with
  select.dtplyr_step.Rd: select
  slice.dtplyr_step.Rd: slice
  summarise.dtplyr_step.Rd: summarise
  transmute.dtplyr_step.Rd: transmute
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Taha Zaghdoudi <zedtaha@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Taha",
                    family = "Zaghdoudi",
                    role = c("aut", "cre"),
                    email = "zedtaha@gmail.com")
as necessary.
checkRd: (-1) Mena.Rd:14: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Mena.Rd:19: Lost braces in \itemize; meant \describe ?
Examples with CPU (user + system) or elapsed time > 5s
    user system elapsed
dtp 4.06  0.054   5.028
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  dataTableOutput.Rd: shinyWidgetOutput
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                              user system elapsed
predict.DTR.Boots.KernSmooth 4.289  0.001   6.076
Maintainer: ‘Yuan Chen <irene.yuan.chen@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yuan",
                      family = "Chen",
                      role = c("aut", "cre"),
                      email = "irene.yuan.chen@gmail.com"),
               person(given = "Ying",
                      family = "Liu",
                      role = "aut"),
               person(given = "Donglin",
                      family = "Zeng",
                      role = "aut"),
               person(given = "Yuanjia",
                      family = "Wang",
                      role = "aut"))
as necessary.
Maintainer: ‘Shannon T. Holloway <shannon.t.holloway@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michael",
                      family = "Wallace",
                      role = "aut"),
               person(given = c("Erica", "E", "M"),
                      family = "Moodie",
                      role = "aut"),
               person(given = c("David", "A"),
                      family = "Stephens",
                      role = "aut"),
               person(given = "Gabrielle",
                      family = "Simoneau",
                      role = "aut"),
               person(given = c("Shannon", "T."),
                      family = "Holloway",
                      role = c("aut", "cre"),
                      email = "shannon.t.holloway@gmail.com"),
               person(given = "Juliana",
                      family = "Schulz",
                      role = "aut"))
as necessary.
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘Ahat.R’ ‘DTRreg.R’ ‘DWsurv.R’ ‘dtrProcedure.R’ ‘gest.R’
    ‘inputProcessing.R’ ‘interactive.R’ ‘treatmentClasses.R’ ‘utils.R’
    ‘varest.R’
Maintainer: ‘Shannon T. Holloway <shannon.t.holloway@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Shannon", "T."),
                      family = "Holloway",
                      role = c("aut", "cre"),
                      email = "shannon.t.holloway@gmail.com"),
               person(given = "Hunyong",
                      family = "Cho",
                      role = "aut"))
as necessary.

The Description field contains
  Holloway, S. T., and Kosorok, M. R. (2020) <arXiv:2012.03294>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Lukasz Komsta <lukasz.komsta@umlub.pl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lukasz",
                    family = "Komsta",
                    role = c("aut", "cre"),
                    email = "lukasz.komsta@umlub.pl")
as necessary.

The Date field is not in ISO 8601 yyyy-mm-dd format.
Maintainer: ‘Dirk Eddelbuettel <edd@debian.org>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Dirk",
                      family = "Eddelbuettel",
                      role = c("aut", "cre"),
                      email = "edd@debian.org"),
               person(given = "Leonardo",
                      family = "Silvestri",
                      role = "aut"))
as necessary.
Maintainer: ‘Emilie Poisson-Caillault <emilie.poisson@univ-littoral.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Camille",
                      family = "Dezecache",
                      role = "aut"),
               person(given = c("T.", "T.", "Hong"),
                      family = "Phan",
                      role = "aut"),
               person(given = "Emilie",
                      family = "Poisson-Caillault",
                      role = c("aut", "cre"),
                      email = "emilie.poisson@univ-littoral.fr"))
as necessary.
Maintainer: ‘Alexis Sarda <alexis.sarda@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Alexis",
                      family = "Sarda-Espinosa",
                      role = "aut"),
               person(given = "Alexis",
                      family = "Sarda",
                      role = "cre",
                      email = "alexis.sarda@gmail.com"))
as necessary.
Maintainer: ‘Toni Giorgino <toni.giorgino@gmail.com>’

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Maintainer: ‘POISSON-CAILLAULT Emilie <emilie.poisson@univ-littoral.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "DEZECACHE",
                      family = "Camille",
                      role = "aut"),
               person(given = c("PHAN", "Thi", "Thu"),
                      family = "Hong",
                      role = "aut"),
               person(given = "POISSON-CAILLAULT",
                      family = "Emilie",
                      role = c("aut", "cre"),
                      email = "emilie.poisson@univ-littoral.fr"))
as necessary.
checkRd: (-1) DTWUMI_1gap_imputation.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) DTWUMI_1gap_imputation.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
plot.dualScale 6.278  0.082   8.385
Missing dependency on R >= 4.1.0 because package code uses the pipe
  |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘scale_duke_color_discrete.Rd’ ‘scale_duke_fill_discrete.Rd’
Maintainer: ‘Foo Cheung <foocheung@yahoo.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Foo",
                    family = "Cheung",
                    role = c("aut", "cre"),
                    email = "foocheung@yahoo.com")
as necessary.
Maintainer: ‘Michel Ballings <michel.ballings@GMail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Michel",
                      family = "Ballings",
                      role = c("aut", "cre"),
                      email = "michel.ballings@gmail.com"),
               person(given = "Dirk",
                      family = "Van den Poel",
                      role = "aut"))
as necessary.
Maintainer: ‘Alexis Dinno <alexis.dinno@pdx.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Alexis",
                    family = "Dinno",
                    role = c("aut", "cre"),
                    email = "alexis.dinno@pdx.edu")
as necessary.
Maintainer: ‘Juan Julián Merelo-Guervós <jjmerelo@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Juan", "Julián"),
                    family = "Merelo-Guervós",
                    role = c("aut", "cre"),
                    email = "jjmerelo@gmail.com")
as necessary.
Maintainer: ‘Russ Hyde <russ.hyde.data@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Russ",
                      family = "Hyde",
                      role = c("aut", "cre"),
                      email = "russ.hyde.data@gmail.com"),
               person(given = c("University", "of"),
                      family = "Glasgow",
                      role = "aut"))
as necessary.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  DurgaPlot.Rd: RColorBrewer
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Maintainer: ‘Dane R. Van Domelen <vandomed@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Dane", "R."),
                    family = "Van Domelen",
                    role = c("aut", "cre"),
                    email = "vandomed@gmail.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dvmisc.Rd’:
    https://doi.org/10.7287/peerj.preprints.3188v1
Problems with news in ‘NEWS.md’:
No news entries found.
Examples with CPU (user + system) or elapsed time > 5s
          user system elapsed
offlinem 4.426  0.053    5.64
Missing dependency on R >= 4.2.0 because package code uses the pipe
  placeholder syntax added in R 4.2.0.
  File(s) using such syntax:
    ‘utils.R’
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
genDWD 8.739   0.06  11.604
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
readRadarFile 7.116  0.152   8.138
Maintainer: ‘Hugo Gasca-Aragon <hugo_gasca_aragon@hotmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Hugo",
                    family = "Gasca-Aragon",
                    role = c("aut", "cre"),
                    email = "hugo_gasca_aragon@hotmail.com")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘dwlm.Rd’:
    https://doi.org/10.1119/1.15963
    https://doi.org/10.1119/1.17044
    https://doi.org/10.1039/AN9871200377
Maintainer: ‘Daniel Dalthorp <ddalthorp@protonmail.com>’

The Description field contains
  mortality, following Dalthorp, et al. (2022) <arXiv:2201.10064>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Maintainer: ‘Veronica Vinciotti<veronica.vinciotti@brunel.ac.uk>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Veronica",
                    family = "Vinciotti",
                    role = c("aut", "cre"),
                    email = "veronica.vinciotti@brunel.ac.uk")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
        user system elapsed
res.dw 4.405  0.053   5.602
Maintainer: ‘Bonne J.H. Zijlstra <B.J.H.Zijlstra@uva.nl>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Bonne", "J.H."),
                    family = "Zijlstra",
                    role = c("aut", "cre"),
                    email = "B.J.H.Zijlstra@uva.nl")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
               user system elapsed
p2ML          5.938  0.008   9.687
b2ML          4.169  0.066   6.612
dyads-package 3.934  0.004   5.448
j2            3.879  0.012   6.125
p2            3.856  0.000   5.731
Maintainer: ‘Nathaniel E. Helwig <helwig@umn.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Nathaniel", "E."),
                    family = "Helwig",
                    role = c("aut", "cre"),
                    email = "helwig@umn.edu")
as necessary.
Maintainer: ‘Flavian Tschurr <flavian.tschurr@usys.ethz.ch>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Flavian",
                    family = "Tschurr",
                    role = c("aut", "cre"),
                    email = "flavian.tschurr@usys.ethz.ch")
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                      user system elapsed
DyMEP                8.438  0.122  11.202
DyMEP_DRC_visualizer 7.590  0.034   9.842
Maintainer: ‘Kosei Abe <mail@recyclebin.jp>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Kosei",
                      family = "Abe",
                      role = c("aut", "cre"),
                      email = "mail@recyclebin.jp"),
               person(given = "Richard",
                      family = "Cotton",
                      role = "ctb"))
as necessary.
Maintainer: ‘Matteo Marcantonio <marcantoniomatteo@gmail.com>’

The BugReports field in DESCRIPTION has
  https://github.com/mattmar/dynamAedes
which should likely be
  https://github.com/mattmar/dynamAedes/issues
instead.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  cfaHB.Rd: lavaan, cfa, model.syntax
  cfaOne.Rd: lavaan, cfa, model.syntax
  equivTest.Rd: lavaan
  exactFit.Rd: lavaan, cfa, model.syntax
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Examples with CPU (user + system) or elapsed time > 5s
                     user system elapsed
spatiotemp_autocorr 7.458  0.202  10.885
Maintainer: ‘Peter Langfelder <Peter.Langfelder@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Peter",
                      family = "Langfelder",
                      role = c("aut", "cre"),
                      email = "Peter.Langfelder@gmail.com"),
               person(given = "Bin",
                      family = "Zhang",
                      role = "aut",
                      email = "binzhang.ucla@gmail.com"),
               person(given = c("with", "contributions", "from", "Steve"),
                      family = "Horvath",
                      role = "aut",
                      email = "SHorvath@mednet.ucla.edu"))
as necessary.
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
as.data.frame.dynamitefit 7.049  0.329   9.509
Maintainer: ‘Eli D. Strauss <straussed@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = c("Eli", "D."),
                    family = "Strauss",
                    role = c("aut", "cre"),
                    email = "straussed@gmail.com")
as necessary.
Problems with news in ‘NEWS.md’:
No news entries found.
checkRd: (-1) dyadic_similarity.Rd:27: Lost braces; missing escapes or markup?
    27 |      For example, the order {a, b, c} implies that a > b, a  > c, and b > c.
       |                             ^
Maintainer: ‘Xuechan Li <xuechanli0530@gmail.com>’

The Description field contains
  <arXiv:1906.07757v2> and Li, Sung and Xie (2021) <arXiv:2103.11085v2>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
Test_Leaf 4.666  0.112   5.142
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
dynatopGIS 4.757  0.213   6.102
Specified C++11: please drop specification unless essential
Maintainer: ‘Yves Rozenholc <yves.rozenholc@u-paris.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Yves",
                      family = "Rozenholc",
                      role = c("aut", "cre"),
                      email = "yves.rozenholc@u-paris.fr",
                      comment = "UR7537, Univ. Paris Cité"),
               person(given = "Christophe",
                      family = "Pouzat",
                      role = "aut",
                      comment = "IRMA, CNRS UMR 7501"),
               person(given = "Tiffany",
                      family = "Lieury",
                      role = "aut",
                      comment = "Cerebral Physiology lab, Univ. Paris Descartes"))
as necessary.