Running ‘testthat.R’ [6m/17m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > pkg_name <- "tern"
  > library(testthat)
  > test_check(pkg_name, reporter = ParallelProgressReporter$new())
  Loading required package: tern
  Loading required package: rtables
  Loading required package: formatters
  
  Attaching package: 'formatters'
  
  The following object is masked from 'package:base':
  
      %||%
  
  Loading required package: magrittr
  
  Attaching package: 'magrittr'
  
  The following objects are masked from 'package:testthat':
  
      equals, is_less_than, not
  
  
  Attaching package: 'rtables'
  
  The following object is masked from 'package:utils':
  
      str
  
  Registered S3 method overwritten by 'tern':
    method   from 
    tidy.glm broom
  
  Attaching package: 'dplyr'
  
  The following object is masked from 'package:testthat':
  
      matches
  
  The following objects are masked from 'package:stats':
  
      filter, lag
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  ✔ | F W  S  OK | Context
  
  ⠋ [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ] Starting up...                          
  ✔ |      7   7 | abnormal [4.1s]                                                
  
  ✔ |      5   8 | abnormal_by_baseline [3.0s]                                    
  
  ✔ |      3   4 | abnormal_by_marked [19.9s]                                     
  
  ✔ |      2   3 | abnormal_by_worst_grade [2.1s]                                 
  
  ✔ |      8  12 | abnormal_by_worst_grade_worsen [5.3s]                          
  
  ✖ | 1   31  51 | analyze_variables [55.3s]                                      
  ────────────────────────────────────────────────────────────────────────────────
  Failure ('test-analyze_variables.R:586:3'): analyze_vars works well with additional stat names (.stat_names_in) and stats (custom fnc)
  as_result_df(res, data_format = "strings")[nrow(res2), ncol(res2)] (`actual`) not equal to c("0.00") (`expected`).
  
  `actual` is NULL
  `expected` is a character vector ('0.00')
  ────────────────────────────────────────────────────────────────────────────────
  
  ✔ |      7   8 | analyze_vars_in_cols [46.8s]                                   
  
  ✔ |      2   7 | bland-altman [1.8s]                                            
  
  ✔ |         16 | combination_function [1.0s]                                    
  
  ✔ |      9  17 | compare_variables [10.4s]                                      
  
  ✔ |      1   3 | control_logistic                                               
  
  ✔ |      1   4 | control_step                                                   
  
  ✔ |      3  11 | control_survival [1.1s]                                        
  
  ✔ |      7   7 | count_cumulative [7.3s]                                        
  
  ✔ |      6   6 | count_missed_doses [5.3s]                                      
  
  ✔ |      8  15 | count_occurrences [17.8s]                                      
  
  ✔ |     17  19 | count_occurrences_by_grade [32.9s]                             
  
  ✔ |      4   4 | count_patients_events_in_cols [4.4s]                           
  
  ✔ |      8   8 | count_patients_with_event [4.9s]                               
  
  ✔ |     11  11 | count_patients_with_flags [11.3s]                              
  
  ✔ |     11  11 | count_values [5.4s]                                            
  
  ✔ |      5  10 | coxph [2.6s]                                                   
  
  ✔ |     24  50 | coxreg [13.0s]                                                 
  
  ✔ |      2  13 | decorate_grob [13.5s]                                          
  
  ✔ |      5   5 | desctools_binom_diff [3.9s]                                    
  
  ✔ |      5  12 | df_explicit_na [1.4s]                                          
  
  ✔ |      3   7 | estimate_multinom_rsp [3.7s]                                   
  
  ✔ |     17  17 | estimate_proportion [8.6s]                                     
  
  ✔ |      3  13 | fit_rsp_step [6.2s]                                            
  
  ✔ |      3   9 | fit_survival_step [6.1s]                                       
  
  ✔ |     21  33 | formatting_functions [6.6s]                                    
  
  ✔ |      3  18 | g_forest [69.8s]                                               
  
  ✔ |      9  18 | g_km [58.8s]                                                   
  
  ✔ |      7  14 | g_lineplot [41.1s]                                             
  
  ✔ |      4  10 | g_step [3.4s]                                                  
  
  ✔ |      2   2 | g_waterfall                                                    
  
  ✔ |      5   1 | h_adsl_adlb_merge_using_worst_flag [4.1s]                      
  
  ✔ |      1   1 | h_format_row                                                   
  
  ✔ |      5   5 | h_incidence_rate                                               
  
  ✔ |     13  21 | h_km [9.2s]                                                    
  
  ✔ |     16  38 | h_logistic_regression [8.2s]                                   
  
  ✔ |      7   7 | h_map_for_count_abnormal [3.0s]                                
  
  ✔ |      2   2 | h_pkparam_sort                                                 
  
  ✔ |      5   5 | h_response_biomarkers_subgroups [3.9s]                         
  
  ✔ |     14  15 | h_response_subgroups [5.6s]                                    
  
  ✔ |      3   5 | h_stack_by_baskets                                             
  
  ✔ |      8  43 | h_step [6.5s]                                                  
  
  ✔ |      4   8 | h_survival_biomarkers_subgroups [3.5s]                         
  
  ✔ |     16  17 | h_survival_duration_subgroups [3.9s]                           
  
  ✔ |      2   0 | imputation_rule                                                
  
  ✔ |      8  12 | incidence_rate [9.6s]                                          
  
  ✔ |          7 | individual_patient_plot [3.4s]                                 
  
  ✔ |      6  21 | logistic_regression [29.7s]                                    
  
  ✔ |      7  19 | make_afun [2.9s]                                               
  
  ✔ |      8  11 | odds_ratio [7.0s]                                              
  
  ✔ |     11  19 | prop_diff [3.8s]                                               
  
  ✔ |      7  14 | prune_occurrences [19.2s]                                      
  
  ✔ |      6  10 | response_biomarkers_subgroups [27.0s]                          
  
  ✔ |     14  16 | response_subgroups [69.3s]                                     
  
  ✔ |      5   8 | rtables_access [15.7s]                                         
  
  ✔ |      5   8 | score_occurrences [10.9s]                                      
  
  ✔ |     15  19 | split_cols_by_groups [7.0s]                                    
  
  ✔ |      9  11 | stat                                                           
  
  ✔ |      5  11 | summarize_ancova [10.5s]                                       
  
  ✔ |      5   7 | summarize_change [4.4s]                                        
  
  ✔ |      3   3 | summarize_colvars [7.7s]                                       
  
  ✔ |     13  15 | summarize_coxreg [22.2s]                                       
  
  ✔ |     17  26 | summarize_glm_count [10.8s]                                    
  
  ✔ |     16  16 | summarize_num_patients [6.1s]                                  
  
  ✔ |      9   9 | summarize_patients_exposure_in_cols [4.3s]                     
  
  ✔ |      7  10 | survival_biomarkers_subgroups [18.3s]                          
  
  ✔ |      8   9 | survival_coxph_pairwise [2.3s]                                 
  
  ✔ |     14  17 | survival_duration_subgroups [38.8s]                            
  
  ✔ |      7   9 | survival_time [6.4s]                                           
  
  ✔ |     10  11 | survival_timepoint [4.9s]                                      
  
  ✔ |     11  12 | test_proportion_diff [4.5s]                                    
  
  ✔ |     59  79 | utils [7.0s]                                                   
  
  ✔ |         42 | utils_checkmate [1.9s]                                         
  
  ✔ |      6  27 | utils_default_stats_formats_labels [1.6s]                      
  
  ✔ |     13  26 | utils_factor [2.4s]                                            
  
  ✔ |      3   3 | utils_ggplot [3.8s]                                            
  
  ✔ |          8 | utils_grid [1.0s]                                              
  
  ✔ |     19  24 | utils_rtables [40.3s]                                          
  
  ✔ |      6  13 | utils_split_fun [10.0s]                                        
  
                                                                                  
  ══ Results ═════════════════════════════════════════════════════════════════════
  Duration: 948.4 s
  
  ── Skipped tests (697) ─────────────────────────────────────────────────────────
  • On CRAN (668): 'test-abnormal.R:24:3', 'test-abnormal.R:51:3',
    'test-abnormal.R:80:3', 'test-abnormal.R:103:3', 'test-abnormal.R:134:3',
    'test-abnormal.R:160:3', 'test-abnormal.R:186:3',
    'test-abnormal_by_baseline.R:16:3', 'test-abnormal_by_baseline.R:46:3',
    'test-abnormal_by_baseline.R:80:3', 'test-abnormal_by_baseline.R:94:3',
    'test-abnormal_by_baseline.R:113:3', 'test-abnormal_by_marked.R:80:3',
    'test-abnormal_by_marked.R:135:3', 'test-abnormal_by_marked.R:254:3',
    'test-abnormal_by_worst_grade.R:43:3', 'test-abnormal_by_worst_grade.R:71:3',
    'test-abnormal_by_worst_grade_worsen.R:64:3',
    'test-abnormal_by_worst_grade_worsen.R:82:3',
    'test-abnormal_by_worst_grade_worsen.R:102:3',
    'test-abnormal_by_worst_grade_worsen.R:122:3',
    'test-abnormal_by_worst_grade_worsen.R:142:3',
    'test-abnormal_by_worst_grade_worsen.R:162:3',
    'test-abnormal_by_worst_grade_worsen.R:184:3',
    'test-abnormal_by_worst_grade_worsen.R:211:3',
    'test-analyze_variables.R:7:3', 'test-analyze_variables.R:17:3',
    'test-analyze_variables.R:31:3', 'test-analyze_variables.R:39:3',
    'test-analyze_variables.R:48:3', 'test-analyze_variables.R:62:3',
    'test-analyze_variables.R:72:3', 'test-analyze_variables.R:81:3',
    'test-analyze_variables.R:90:3', 'test-analyze_variables.R:113:3',
    'test-analyze_variables.R:127:3', 'test-analyze_variables.R:134:3',
    'test-analyze_variables.R:143:3', 'test-analyze_variables.R:152:3',
    'test-analyze_variables.R:172:3', 'test-analyze_variables.R:232:3',
    'test-analyze_variables.R:253:3', 'test-analyze_variables.R:293:3',
    'test-analyze_variables.R:313:3', 'test-analyze_variables.R:328:3',
    'test-analyze_variables.R:339:3', 'test-analyze_variables.R:350:3',
    'test-analyze_variables.R:361:3', 'test-analyze_variables.R:396:3',
    'test-analyze_variables.R:407:3', 'test-analyze_variables.R:455:3',
    'test-analyze_variables.R:466:3', 'test-analyze_variables.R:492:3',
    'test-analyze_variables.R:510:3', 'test-analyze_variables.R:520:3',
    'test-analyze_variables.R:539:3', 'test-analyze_vars_in_cols.R:11:3',
    'test-analyze_vars_in_cols.R:53:3', 'test-analyze_vars_in_cols.R:105:3',
    'test-analyze_vars_in_cols.R:180:3', 'test-analyze_vars_in_cols.R:251:3',
    'test-analyze_vars_in_cols.R:319:3', 'test-analyze_vars_in_cols.R:422:3',
    'test-bland-altman.R:79:3', 'test-compare_variables.R:9:3',
    'test-compare_variables.R:20:3', 'test-compare_variables.R:29:3',
    'test-compare_variables.R:47:3', 'test-compare_variables.R:69:3',
    'test-compare_variables.R:78:3', 'test-compare_variables.R:100:3',
    'test-compare_variables.R:115:3', 'test-compare_variables.R:125:3',
    'test-control_logistic.R:8:3', 'test-control_step.R:5:3',
    'test-control_survival.R:7:3', 'test-control_survival.R:21:3',
    'test-control_survival.R:36:3', 'test-count_cumulative.R:12:3',
    'test-count_cumulative.R:30:3', 'test-count_cumulative.R:44:3',
    'test-count_cumulative.R:62:3', 'test-count_cumulative.R:81:3',
    'test-count_cumulative.R:103:3', 'test-count_cumulative.R:129:3',
    'test-count_missed_doses.R:8:3', 'test-count_missed_doses.R:17:3',
    'test-count_missed_doses.R:24:3', 'test-count_missed_doses.R:36:3',
    'test-count_missed_doses.R:56:3', 'test-count_missed_doses.R:79:3',
    'test-count_occurrences.R:10:3', 'test-count_occurrences.R:66:3',
    'test-count_occurrences.R:110:3', 'test-count_occurrences.R:136:3',
    'test-count_occurrences.R:162:3', 'test-count_occurrences.R:176:3',
    'test-count_occurrences.R:231:3', 'test-count_occurrences.R:246:3',
    'test-count_occurrences_by_grade.R:26:3',
    'test-count_occurrences_by_grade.R:40:3',
    'test-count_occurrences_by_grade.R:48:3',
    'test-count_occurrences_by_grade.R:67:3',
    'test-count_occurrences_by_grade.R:84:3',
    'test-count_occurrences_by_grade.R:135:3',
    'test-count_occurrences_by_grade.R:147:3',
    'test-count_occurrences_by_grade.R:163:3',
    'test-count_occurrences_by_grade.R:177:3',
    'test-count_occurrences_by_grade.R:202:3',
    'test-count_occurrences_by_grade.R:228:3',
    'test-count_occurrences_by_grade.R:263:3',
    'test-count_occurrences_by_grade.R:310:3',
    'test-count_occurrences_by_grade.R:342:3',
    'test-count_occurrences_by_grade.R:425:3',
    'test-count_occurrences_by_grade.R:458:3',
    'test-count_occurrences_by_grade.R:475:3',
    'test-count_patients_events_in_cols.R:23:3',
    'test-count_patients_events_in_cols.R:39:3',
    'test-count_patients_events_in_cols.R:55:3',
    'test-count_patients_events_in_cols.R:75:3',
    'test-count_patients_with_event.R:16:3',
    'test-count_patients_with_event.R:35:3',
    'test-count_patients_with_event.R:56:3',
    'test-count_patients_with_event.R:80:3',
    'test-count_patients_with_event.R:112:3',
    'test-count_patients_with_event.R:150:3',
    'test-count_patients_with_event.R:172:3',
    'test-count_patients_with_event.R:188:3',
    'test-count_patients_with_flags.R:16:3',
    'test-count_patients_with_flags.R:35:3',
    'test-count_patients_with_flags.R:58:3',
    'test-count_patients_with_flags.R:125:3',
    'test-count_patients_with_flags.R:153:3',
    'test-count_patients_with_flags.R:195:3',
    'test-count_patients_with_flags.R:243:3',
    'test-count_patients_with_flags.R:282:3',
    'test-count_patients_with_flags.R:308:3',
    'test-count_patients_with_flags.R:385:3',
    'test-count_patients_with_flags.R:441:3', 'test-count_values.R:8:3',
    'test-count_values.R:24:3', 'test-count_values.R:39:3',
    'test-count_values.R:47:3', 'test-count_values.R:55:3',
    'test-count_values.R:64:3', 'test-count_values.R:81:3',
    'test-count_values.R:91:3', 'test-count_values.R:101:3',
    'test-count_values.R:118:3', 'test-count_values.R:127:3', 'test-coxph.R:5:3',
    'test-coxph.R:17:3', 'test-coxph.R:41:3', 'test-coxph.R:112:3',
    'test-coxreg.R:44:3', 'test-coxreg.R:56:3', 'test-coxreg.R:67:3',
    'test-coxreg.R:80:3', 'test-coxreg.R:92:3', 'test-coxreg.R:124:3',
    'test-coxreg.R:136:3', 'test-coxreg.R:147:3', 'test-coxreg.R:158:3',
    'test-coxreg.R:170:3', 'test-coxreg.R:182:3', 'test-coxreg.R:193:3',
    'test-coxreg.R:204:3', 'test-coxreg.R:216:3', 'test-coxreg.R:225:3',
    'test-coxreg.R:248:3', 'test-coxreg.R:298:3', 'test-coxreg.R:309:3',
    'test-coxreg.R:320:3', 'test-coxreg.R:360:3', 'test-coxreg.R:374:3',
    'test-coxreg.R:388:3', 'test-coxreg.R:533:3', 'test-coxreg.R:585:3',
    'test-decorate_grob.R:55:3', 'test-desctools_binom_diff.R:18:3',
    'test-desctools_binom_diff.R:33:3', 'test-desctools_binom_diff.R:42:3',
    'test-desctools_binom_diff.R:51:3', 'test-desctools_binom_diff.R:63:3',
    'test-df_explicit_na.R:22:3', 'test-df_explicit_na.R:36:3',
    'test-df_explicit_na.R:44:3', 'test-df_explicit_na.R:57:3',
    'test-df_explicit_na.R:70:3', 'test-estimate_multinom_rsp.R:6:3',
    'test-estimate_multinom_rsp.R:14:3', 'test-estimate_multinom_rsp.R:48:3',
    'test-estimate_proportion.R:9:3', 'test-estimate_proportion.R:29:3',
    'test-estimate_proportion.R:43:3', 'test-estimate_proportion.R:78:3',
    'test-estimate_proportion.R:106:3', 'test-estimate_proportion.R:131:3',
    'test-estimate_proportion.R:142:3', 'test-estimate_proportion.R:154:3',
    'test-estimate_proportion.R:170:3', 'test-estimate_proportion.R:181:3',
    'test-estimate_proportion.R:203:3', 'test-estimate_proportion.R:210:3',
    'test-estimate_proportion.R:223:3', 'test-estimate_proportion.R:247:3',
    'test-estimate_proportion.R:281:3', 'test-estimate_proportion.R:307:3',
    'test-estimate_proportion.R:339:5', 'test-fit_rsp_step.R:29:3',
    'test-fit_rsp_step.R:58:3', 'test-fit_rsp_step.R:85:3',
    'test-fit_survival_step.R:34:3', 'test-fit_survival_step.R:65:3',
    'test-fit_survival_step.R:88:3', 'test-formatting_functions.R:5:3',
    'test-formatting_functions.R:12:3', 'test-formatting_functions.R:19:3',
    'test-formatting_functions.R:26:3', 'test-formatting_functions.R:33:3',
    'test-formatting_functions.R:40:3', 'test-formatting_functions.R:47:3',
    'test-formatting_functions.R:59:3', 'test-formatting_functions.R:66:3',
    'test-formatting_functions.R:73:3', 'test-formatting_functions.R:82:3',
    'test-formatting_functions.R:91:3', 'test-formatting_functions.R:116:3',
    'test-formatting_functions.R:125:3', 'test-formatting_functions.R:134:3',
    'test-formatting_functions.R:150:3', 'test-formatting_functions.R:158:3',
    'test-formatting_functions.R:172:3', 'test-formatting_functions.R:181:3',
    'test-formatting_functions.R:190:3', 'test-formatting_functions.R:252:3',
    'test-g_step.R:36:3', 'test-g_step.R:65:3',
    'test-h_adsl_adlb_merge_using_worst_flag.R:11:3',
    'test-h_adsl_adlb_merge_using_worst_flag.R:25:3',
    'test-h_adsl_adlb_merge_using_worst_flag.R:39:3',
    'test-h_adsl_adlb_merge_using_worst_flag.R:55:5',
    'test-h_adsl_adlb_merge_using_worst_flag.R:68:3', 'test-h_format_row.R:11:3',
    'test-h_incidence_rate.R:5:3', 'test-h_incidence_rate.R:12:3',
    'test-h_incidence_rate.R:19:3', 'test-h_incidence_rate.R:26:3',
    'test-h_incidence_rate.R:37:3', 'test-h_km.R:11:3', 'test-h_km.R:18:3',
    'test-h_km.R:26:3', 'test-h_km.R:34:3', 'test-h_km.R:43:3',
    'test-h_km.R:58:3', 'test-h_km.R:68:3', 'test-h_km.R:77:3',
    'test-h_km.R:84:3', 'test-h_km.R:99:3', 'test-h_km.R:118:3',
    'test-h_km.R:131:3', 'test-h_km.R:143:3',
    'test-h_logistic_regression.R:28:3', 'test-h_logistic_regression.R:49:3',
    'test-h_logistic_regression.R:74:3', 'test-h_logistic_regression.R:107:3',
    'test-h_logistic_regression.R:146:5', 'test-h_logistic_regression.R:204:3',
    'test-h_logistic_regression.R:218:3', 'test-h_logistic_regression.R:230:3',
    'test-h_logistic_regression.R:247:3', 'test-h_logistic_regression.R:283:3',
    'test-h_logistic_regression.R:300:3', 'test-h_logistic_regression.R:317:3',
    'test-h_logistic_regression.R:336:3', 'test-h_logistic_regression.R:373:3',
    'test-h_logistic_regression.R:395:3', 'test-h_logistic_regression.R:442:3',
    'test-h_map_for_count_abnormal.R:27:3',
    'test-h_map_for_count_abnormal.R:49:3',
    'test-h_map_for_count_abnormal.R:71:5',
    'test-h_map_for_count_abnormal.R:98:5',
    'test-h_map_for_count_abnormal.R:125:5',
    'test-h_map_for_count_abnormal.R:154:5',
    'test-h_map_for_count_abnormal.R:182:5', 'test-h_pkparam_sort.R:6:3',
    'test-h_pkparam_sort.R:17:3', 'test-h_response_biomarkers_subgroups.R:27:3',
    'test-h_response_biomarkers_subgroups.R:51:3',
    'test-h_response_biomarkers_subgroups.R:69:3',
    'test-h_response_biomarkers_subgroups.R:92:3',
    'test-h_response_biomarkers_subgroups.R:120:3',
    'test-h_response_subgroups.R:28:3', 'test-h_response_subgroups.R:38:3',
    'test-h_response_subgroups.R:55:3', 'test-h_response_subgroups.R:67:3',
    'test-h_response_subgroups.R:79:3', 'test-h_response_subgroups.R:98:3',
    'test-h_response_subgroups.R:108:3', 'test-h_response_subgroups.R:122:3',
    'test-h_response_subgroups.R:141:3', 'test-h_response_subgroups.R:155:3',
    'test-h_response_subgroups.R:167:3', 'test-h_response_subgroups.R:179:3',
    'test-h_response_subgroups.R:201:3', 'test-h_response_subgroups.R:224:3',
    'test-h_stack_by_baskets.R:9:3', 'test-h_stack_by_baskets.R:48:5',
    'test-h_stack_by_baskets.R:76:5', 'test-h_step.R:30:3', 'test-h_step.R:56:3',
    'test-h_step.R:124:3', 'test-h_step.R:193:3', 'test-h_step.R:240:3',
    'test-h_step.R:310:3', 'test-h_step.R:435:3', 'test-h_step.R:476:3',
    'test-h_survival_biomarkers_subgroups.R:37:3',
    'test-h_survival_biomarkers_subgroups.R:57:3',
    'test-h_survival_biomarkers_subgroups.R:75:3',
    'test-h_survival_biomarkers_subgroups.R:103:3',
    'test-h_survival_duration_subgroups.R:35:3',
    'test-h_survival_duration_subgroups.R:55:3',
    'test-h_survival_duration_subgroups.R:75:3',
    'test-h_survival_duration_subgroups.R:102:3',
    'test-h_survival_duration_subgroups.R:124:3',
    'test-h_survival_duration_subgroups.R:139:3',
    'test-h_survival_duration_subgroups.R:151:3',
    'test-h_survival_duration_subgroups.R:170:3',
    'test-h_survival_duration_subgroups.R:183:3',
    'test-h_survival_duration_subgroups.R:198:3',
    'test-h_survival_duration_subgroups.R:212:3',
    'test-h_survival_duration_subgroups.R:226:3',
    'test-h_survival_duration_subgroups.R:238:3',
    'test-h_survival_duration_subgroups.R:263:3',
    'test-h_survival_duration_subgroups.R:275:3',
    'test-h_survival_duration_subgroups.R:294:3', 'test-imputation_rule.R:13:3',
    'test-imputation_rule.R:31:3', 'test-incidence_rate.R:19:3',
    'test-incidence_rate.R:43:3', 'test-incidence_rate.R:55:3',
    'test-incidence_rate.R:77:3', 'test-incidence_rate.R:90:3',
    'test-incidence_rate.R:113:3', 'test-incidence_rate.R:128:3',
    'test-incidence_rate.R:150:3', 'test-logistic_regression.R:153:3',
    'test-logistic_regression.R:171:3', 'test-logistic_regression.R:198:3',
    'test-logistic_regression.R:232:3', 'test-logistic_regression.R:256:3',
    'test-logistic_regression.R:276:3', 'test-make_afun.R:35:3',
    'test-make_afun.R:88:3', 'test-make_afun.R:122:3', 'test-make_afun.R:170:3',
    'test-make_afun.R:214:3', 'test-make_afun.R:238:3', 'test-make_afun.R:266:3',
    'test-odds_ratio.R:14:3', 'test-odds_ratio.R:41:3', 'test-odds_ratio.R:58:3',
    'test-odds_ratio.R:83:3', 'test-odds_ratio.R:124:3',
    'test-odds_ratio.R:145:3', 'test-odds_ratio.R:180:3',
    'test-odds_ratio.R:247:3', 'test-prop_diff.R:9:3', 'test-prop_diff.R:30:3',
    'test-prop_diff.R:49:3', 'test-prop_diff.R:81:3', 'test-prop_diff.R:120:3',
    'test-prop_diff.R:150:3', 'test-prop_diff.R:225:3', 'test-prop_diff.R:246:3',
    'test-prop_diff.R:272:3', 'test-prop_diff.R:333:3', 'test-prop_diff.R:357:3',
    'test-prune_occurrences.R:57:3', 'test-prune_occurrences.R:72:3',
    'test-prune_occurrences.R:94:3', 'test-prune_occurrences.R:112:3',
    'test-prune_occurrences.R:127:3', 'test-prune_occurrences.R:142:3',
    'test-prune_occurrences.R:164:3',
    'test-response_biomarkers_subgroups.R:35:3',
    'test-response_biomarkers_subgroups.R:74:3',
    'test-response_biomarkers_subgroups.R:103:3',
    'test-response_biomarkers_subgroups.R:122:3',
    'test-response_biomarkers_subgroups.R:146:3',
    'test-response_biomarkers_subgroups.R:165:3',
    'test-response_subgroups.R:30:3', 'test-response_subgroups.R:42:3',
    'test-response_subgroups.R:62:3', 'test-response_subgroups.R:85:3',
    'test-response_subgroups.R:104:3', 'test-response_subgroups.R:124:3',
    'test-response_subgroups.R:146:3', 'test-response_subgroups.R:187:3',
    'test-response_subgroups.R:207:3', 'test-response_subgroups.R:227:3',
    'test-response_subgroups.R:240:3', 'test-response_subgroups.R:261:3',
    'test-response_subgroups.R:283:3', 'test-response_subgroups.R:308:3',
    'test-rtables_access.R:17:3', 'test-rtables_access.R:49:3',
    'test-rtables_access.R:63:3', 'test-rtables_access.R:77:3',
    'test-rtables_access.R:91:3', 'test-score_occurrences.R:90:3',
    'test-score_occurrences.R:102:3', 'test-score_occurrences.R:113:3',
    'test-score_occurrences.R:134:3', 'test-score_occurrences.R:156:3',
    'test-split_cols_by_groups.R:11:3', 'test-split_cols_by_groups.R:20:3',
    'test-split_cols_by_groups.R:27:3', 'test-split_cols_by_groups.R:34:3',
    'test-split_cols_by_groups.R:41:3', 'test-split_cols_by_groups.R:52:3',
    'test-split_cols_by_groups.R:68:3', 'test-split_cols_by_groups.R:91:3',
    'test-split_cols_by_groups.R:102:3', 'test-split_cols_by_groups.R:120:3',
    'test-split_cols_by_groups.R:147:3', 'test-split_cols_by_groups.R:157:3',
    'test-split_cols_by_groups.R:166:3', 'test-split_cols_by_groups.R:175:3',
    'test-split_cols_by_groups.R:184:3', 'test-stat.R:8:5', 'test-stat.R:36:5',
    'test-stat.R:109:5', 'test-stat.R:132:5', 'test-stat.R:202:3',
    'test-stat.R:221:3', 'test-stat.R:276:3', 'test-stat.R:287:3',
    'test-stat.R:297:3', 'test-summarize_ancova.R:10:3',
    'test-summarize_ancova.R:45:3', 'test-summarize_ancova.R:85:3',
    'test-summarize_ancova.R:108:3', 'test-summarize_ancova.R:193:3',
    'test-summarize_change.R:16:3', 'test-summarize_change.R:34:3',
    'test-summarize_change.R:53:3', 'test-summarize_change.R:78:3',
    'test-summarize_change.R:136:3', 'test-summarize_colvars.R:28:3',
    'test-summarize_colvars.R:43:3', 'test-summarize_colvars.R:63:3',
    'test-summarize_coxreg.R:36:3', 'test-summarize_coxreg.R:48:3',
    'test-summarize_coxreg.R:60:3', 'test-summarize_coxreg.R:76:3',
    'test-summarize_coxreg.R:90:3', 'test-summarize_coxreg.R:131:3',
    'test-summarize_coxreg.R:145:3', 'test-summarize_coxreg.R:160:3',
    'test-summarize_coxreg.R:173:3', 'test-summarize_coxreg.R:185:3',
    'test-summarize_coxreg.R:199:3', 'test-summarize_coxreg.R:215:3',
    'test-summarize_coxreg.R:243:3', 'test-summarize_glm_count.R:18:3',
    'test-summarize_glm_count.R:35:3', 'test-summarize_glm_count.R:73:3',
    'test-summarize_glm_count.R:90:3', 'test-summarize_glm_count.R:110:3',
    'test-summarize_glm_count.R:126:3', 'test-summarize_glm_count.R:164:3',
    'test-summarize_glm_count.R:180:3', 'test-summarize_glm_count.R:219:3',
    'test-summarize_glm_count.R:236:3', 'test-summarize_glm_count.R:289:7',
    'test-summarize_glm_count.R:324:3', 'test-summarize_glm_count.R:346:3',
    'test-summarize_glm_count.R:370:3', 'test-summarize_glm_count.R:394:3',
    'test-summarize_glm_count.R:439:3', 'test-summarize_glm_count.R:470:3',
    'test-summarize_num_patients.R:6:3', 'test-summarize_num_patients.R:14:3',
    'test-summarize_num_patients.R:22:3', 'test-summarize_num_patients.R:33:3',
    'test-summarize_num_patients.R:51:3', 'test-summarize_num_patients.R:90:3',
    'test-summarize_num_patients.R:99:3', 'test-summarize_num_patients.R:108:3',
    'test-summarize_num_patients.R:119:3', 'test-summarize_num_patients.R:130:3',
    'test-summarize_num_patients.R:141:3', 'test-summarize_num_patients.R:159:3',
    'test-summarize_num_patients.R:209:5', 'test-summarize_num_patients.R:243:3',
    'test-summarize_num_patients.R:273:3', 'test-summarize_num_patients.R:302:3',
    'test-summarize_patients_exposure_in_cols.R:23:3',
    'test-summarize_patients_exposure_in_cols.R:35:3',
    'test-summarize_patients_exposure_in_cols.R:49:3',
    'test-summarize_patients_exposure_in_cols.R:72:3',
    'test-summarize_patients_exposure_in_cols.R:95:5',
    'test-summarize_patients_exposure_in_cols.R:109:3',
    'test-summarize_patients_exposure_in_cols.R:126:3',
    'test-summarize_patients_exposure_in_cols.R:144:5',
    'test-summarize_patients_exposure_in_cols.R:166:3',
    'test-survival_biomarkers_subgroups.R:36:3',
    'test-survival_biomarkers_subgroups.R:65:3',
    'test-survival_biomarkers_subgroups.R:85:3',
    'test-survival_biomarkers_subgroups.R:105:3',
    'test-survival_biomarkers_subgroups.R:129:3',
    'test-survival_biomarkers_subgroups.R:153:3',
    'test-survival_biomarkers_subgroups.R:178:3',
    'test-survival_coxph_pairwise.R:18:3', 'test-survival_coxph_pairwise.R:39:3',
    'test-survival_coxph_pairwise.R:59:3', 'test-survival_coxph_pairwise.R:80:3',
    'test-survival_coxph_pairwise.R:102:3',
    'test-survival_coxph_pairwise.R:125:3',
    'test-survival_coxph_pairwise.R:147:3',
    'test-survival_coxph_pairwise.R:172:3',
    'test-survival_duration_subgroups.R:33:3',
    'test-survival_duration_subgroups.R:52:3',
    'test-survival_duration_subgroups.R:68:3',
    'test-survival_duration_subgroups.R:87:3',
    'test-survival_duration_subgroups.R:102:3',
    'test-survival_duration_subgroups.R:117:3',
    'test-survival_duration_subgroups.R:134:3',
    'test-survival_duration_subgroups.R:153:3',
    'test-survival_duration_subgroups.R:175:3',
    'test-survival_duration_subgroups.R:210:3',
    'test-survival_duration_subgroups.R:229:3',
    'test-survival_duration_subgroups.R:249:3',
    'test-survival_duration_subgroups.R:267:3',
    'test-survival_duration_subgroups.R:288:3', 'test-survival_time.R:16:3',
    'test-survival_time.R:37:3', 'test-survival_time.R:56:3',
    'test-survival_time.R:83:3', 'test-survival_time.R:106:3',
    'test-survival_time.R:129:3', 'test-survival_time.R:154:3',
    'test-survival_timepoint.R:17:3', 'test-survival_timepoint.R:39:3',
    'test-survival_timepoint.R:61:3', 'test-survival_timepoint.R:86:3',
    'test-survival_timepoint.R:112:3', 'test-survival_timepoint.R:137:3',
    'test-survival_timepoint.R:162:3', 'test-survival_timepoint.R:188:3',
    'test-survival_timepoint.R:215:3', 'test-survival_timepoint.R:238:3',
    'test-test_proportion_diff.R:12:3', 'test-test_proportion_diff.R:24:3',
    'test-test_proportion_diff.R:49:3', 'test-test_proportion_diff.R:63:3',
    'test-test_proportion_diff.R:89:3', 'test-test_proportion_diff.R:113:3',
    'test-test_proportion_diff.R:133:3', 'test-test_proportion_diff.R:151:3',
    'test-test_proportion_diff.R:169:3', 'test-test_proportion_diff.R:189:3',
    'test-test_proportion_diff.R:211:3', 'test-utils.R:5:3', 'test-utils.R:17:3',
    'test-utils.R:30:3', 'test-utils.R:37:3', 'test-utils.R:57:3',
    'test-utils.R:65:3', 'test-utils.R:73:3', 'test-utils.R:96:3',
    'test-utils.R:105:3', 'test-utils.R:113:3', 'test-utils.R:121:3',
    'test-utils.R:167:3', 'test-utils.R:182:3', 'test-utils.R:191:3',
    'test-utils.R:202:5', 'test-utils.R:212:3', 'test-utils.R:223:3',
    'test-utils.R:234:5', 'test-utils.R:246:5', 'test-utils.R:256:3',
    'test-utils.R:267:3', 'test-utils.R:278:5', 'test-utils.R:290:5',
    'test-utils.R:300:3', 'test-utils.R:311:3', 'test-utils.R:322:5',
    'test-utils.R:334:5', 'test-utils.R:344:3', 'test-utils.R:355:3',
    'test-utils.R:366:5', 'test-utils.R:378:5', 'test-utils.R:388:3',
    'test-utils.R:399:3', 'test-utils.R:410:5', 'test-utils.R:422:5',
    'test-utils.R:434:5', 'test-utils.R:446:3', 'test-utils.R:457:5',
    'test-utils.R:469:5', 'test-utils.R:481:5', 'test-utils.R:504:5',
    'test-utils.R:516:5', 'test-utils.R:528:5', 'test-utils.R:540:3',
    'test-utils.R:551:5', 'test-utils.R:563:5', 'test-utils.R:573:3',
    'test-utils.R:584:3', 'test-utils.R:595:5', 'test-utils.R:607:5',
    'test-utils.R:619:5', 'test-utils.R:631:3', 'test-utils.R:642:5',
    'test-utils.R:654:5', 'test-utils.R:666:5', 'test-utils.R:678:3',
    'test-utils.R:689:5', 'test-utils.R:701:5', 'test-utils.R:713:5',
    'test-utils_default_stats_formats_labels.R:4:3',
    'test-utils_default_stats_formats_labels.R:108:3',
    'test-utils_default_stats_formats_labels.R:203:3',
    'test-utils_default_stats_formats_labels.R:225:3',
    'test-utils_default_stats_formats_labels.R:235:3',
    'test-utils_default_stats_formats_labels.R:245:3',
    'test-utils_factor.R:25:3', 'test-utils_factor.R:36:3',
    'test-utils_factor.R:51:3', 'test-utils_factor.R:58:3',
    'test-utils_factor.R:74:3', 'test-utils_factor.R:86:3',
    'test-utils_factor.R:97:3', 'test-utils_factor.R:115:3',
    'test-utils_factor.R:138:3', 'test-utils_factor.R:149:3',
    'test-utils_factor.R:159:3', 'test-utils_factor.R:167:3',
    'test-utils_factor.R:175:3', 'test-utils_rtables.R:14:3',
    'test-utils_rtables.R:44:3', 'test-utils_rtables.R:52:3',
    'test-utils_rtables.R:66:3', 'test-utils_rtables.R:71:3',
    'test-utils_rtables.R:87:3', 'test-utils_rtables.R:94:3',
    'test-utils_rtables.R:104:3', 'test-utils_rtables.R:119:3',
    'test-utils_rtables.R:132:3', 'test-utils_rtables.R:159:3',
    'test-utils_rtables.R:169:3', 'test-utils_rtables.R:181:3',
    'test-utils_rtables.R:202:3', 'test-utils_rtables.R:215:3',
    'test-utils_rtables.R:228:3', 'test-utils_rtables.R:235:3',
    'test-utils_rtables.R:249:3', 'test-utils_rtables.R:261:3',
    'test-utils_split_fun.R:27:3', 'test-utils_split_fun.R:39:3',
    'test-utils_split_fun.R:56:3', 'test-utils_split_fun.R:74:3',
    'test-utils_split_fun.R:102:3', 'test-utils_split_fun.R:124:3'
  • Skip test is version is greater than 3.8-3, breaking change (1):
    'test-coxph.R:48:3'
  • no_plot_snapshots is TRUE (28): 'test-bland-altman.R:103:3',
    'test-decorate_grob.R:124:3', 'test-g_forest.R:23:3', 'test-g_forest.R:58:3',
    'test-g_forest.R:98:3', 'test-g_km.R:17:3', 'test-g_km.R:30:3',
    'test-g_km.R:42:3', 'test-g_km.R:64:3', 'test-g_km.R:79:3',
    'test-g_km.R:116:3', 'test-g_km.R:130:3', 'test-g_km.R:149:3',
    'test-g_km.R:164:3', 'test-g_lineplot.R:9:3', 'test-g_lineplot.R:32:3',
    'test-g_lineplot.R:52:3', 'test-g_lineplot.R:70:3',
    'test-g_lineplot.R:101:3', 'test-g_lineplot.R:114:3',
    'test-g_lineplot.R:249:3', 'test-g_step.R:18:3', 'test-g_step.R:28:3',
    'test-g_waterfall.R:7:3', 'test-g_waterfall.R:29:3',
    'test-utils_ggplot.R:19:3', 'test-utils_ggplot.R:53:3',
    'test-utils_ggplot.R:59:3'
  
  ── Failed tests ────────────────────────────────────────────────────────────────
  Failure ('test-analyze_variables.R:586:3'): analyze_vars works well with additional stat names (.stat_names_in) and stats (custom fnc)
  as_result_df(res, data_format = "strings")[nrow(res2), ncol(res2)] (`actual`) not equal to c("0.00") (`expected`).
  
  `actual` is NULL
  `expected` is a character vector ('0.00')
  
  [ FAIL 1 | WARN 0 | SKIP 697 | PASS 1183 ]
  Deleting unused snapshots:
  • bland-altman/g_bland_altman.svg
  • decorate_grob/deco_grob_text_wrap.svg
  • g_forest/g_forest.svg
  • g_forest/g_forest_custom_1.svg
  • g_forest/g_forest_custom_2.svg
  • g_forest/g_forest_custom_3.svg
  • g_forest/g_forest_or.svg
  • g_forest/g_forest_plot_only.svg
  • g_forest/g_forest_table_only.svg
  • g_km/g_km_at_risk_title.svg
  • g_km/g_km_ci_ribbon.svg
  • g_km/g_km_crop_ylim.svg
  • g_km/g_km_crop_ylim_failure.svg
  • g_km/g_km_custom.svg
  • g_km/g_km_custom_ylim.svg
  • g_km/g_km_default.svg
  • g_km/g_km_eq_lbls.svg
  • g_km/g_km_plot_only.svg
  • g_km/g_km_ref_group_coxph.svg
  • g_km/g_km_table_only.svg
  • g_km/g_km_title_footer.svg
  • g_lineplot/g_lineplot.svg
  • g_lineplot/g_lineplot_cohorts.svg
  • g_lineplot/g_lineplot_facets.svg
  • g_lineplot/g_lineplot_factor_levels.svg
  • g_lineplot/g_lineplot_plot_only.svg
  • g_lineplot/g_lineplot_table_only.svg
  • g_lineplot/g_lineplot_w_stats.svg
  • g_lineplot/g_lineplot_xlim_ylim.svg
  • g_lineplot/g_lineplot_xticks.svg
  • g_lineplot/g_lineplot_xticks_by.svg
  • g_step/g_step.svg
  • g_step/g_step_custom.svg
  • g_waterfall/g_waterfall.svg
  • g_waterfall/g_waterfall_decorated.svg
  • utils_ggplot/df2gg_cw.svg
  • utils_ggplot/df2gg_default.svg
  • utils_ggplot/df2gg_fs.svg
  • utils_ggplot/rtable2gg_colsplits.svg
  • utils_ggplot/rtable2gg_cw.svg
  • utils_ggplot/rtable2gg_default.svg
  • utils_ggplot/rtable2gg_fs.svg
  • utils_ggplot/rtable2gg_lblpad.svg
  Error: Test failures
  Execution halted