Error(s) in re-building vignettes:
--- re-building ‘CovarianceStructure.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/vign_test/clustTMB/vignettes/CovarianceStructure_files/figure-html/fig1-1.png
480x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 76121 bytes
Input file size = 76307 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 48934
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 48934

Output IDAT size = 48934 bytes (27187 bytes decrease)
Output file size = 49012 bytes (27295 bytes = 35.77% decrease)

--- finished re-building ‘CovarianceStructure.Rmd’

Warning: elapsed-time limit of 1 hours reached for sub-process
--- re-building ‘SpatialExMeuseData.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/vign_test/clustTMB/vignettes/SpatialExMeuseData_files/figure-html/sample-1.png
576x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43472 bytes
Input file size = 43610 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30466
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30466

Output IDAT size = 30466 bytes (13006 bytes decrease)
Output file size = 30544 bytes (13066 bytes = 29.96% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/vign_test/clustTMB/vignettes/SpatialExMeuseData_files/figure-html/pairs-expl-1.png
576x384 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24151 bytes
Input file size = 25033 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22370
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22370

Output IDAT size = 22370 bytes (1781 bytes decrease)
Output file size = 22448 bytes (2585 bytes = 10.33% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/vign_test/clustTMB/vignettes/SpatialExMeuseData_files/figure-html/fig1-1.png
384x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 68130 bytes
Input file size = 68304 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 42335
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 42335

Output IDAT size = 42335 bytes (25795 bytes decrease)
Output file size = 42413 bytes (25891 bytes = 37.91% decrease)

SUMMARY: processing the following file failed:
  ‘SpatialExMeuseData.Rmd’

Error: Vignette re-building failed.
Execution halted