Error(s) in re-building vignettes:
--- re-building ‘MatchIt.Rmd’ using rmarkdown_notangle
** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/MatchIt_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 22121 bytes
Input file size = 23003 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21359
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21086
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21086

Output IDAT size = 21086 bytes (1035 bytes decrease)
Output file size = 21164 bytes (1839 bytes = 7.99% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/MatchIt_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 14986 bytes
Input file size = 15856 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13276
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13276

Output IDAT size = 13276 bytes (1710 bytes decrease)
Output file size = 13354 bytes (2502 bytes = 15.78% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/MatchIt_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11831 bytes
Input file size = 12701 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10710
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10578
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10578

Output IDAT size = 10578 bytes (1253 bytes decrease)
Output file size = 10656 bytes (2045 bytes = 16.10% decrease)

--- finished re-building ‘MatchIt.Rmd’

--- re-building ‘assessing-balance.Rmd’ using rmarkdown_notangle
** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 16018 bytes
Input file size = 16888 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14870
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 14684
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 14684

Output IDAT size = 14684 bytes (1334 bytes decrease)
Output file size = 14762 bytes (2126 bytes = 12.59% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-4-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25426 bytes
Input file size = 26320 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 23391
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 23320
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 23320

Output IDAT size = 23320 bytes (2106 bytes decrease)
Output file size = 23398 bytes (2922 bytes = 11.10% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11666 bytes
Input file size = 12536 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10322
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10322

Output IDAT size = 10322 bytes (1344 bytes decrease)
Output file size = 10400 bytes (2136 bytes = 17.04% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-6-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 15727 bytes
Input file size = 16597 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14072
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14072

Output IDAT size = 14072 bytes (1655 bytes decrease)
Output file size = 14150 bytes (2447 bytes = 14.74% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11959 bytes
Input file size = 12829 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10962
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10952
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10952

Output IDAT size = 10952 bytes (1007 bytes decrease)
Output file size = 11030 bytes (1799 bytes = 14.02% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 15017 bytes
Input file size = 15887 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13363
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13363

Output IDAT size = 13363 bytes (1654 bytes decrease)
Output file size = 13441 bytes (2446 bytes = 15.40% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21454 bytes
Input file size = 21556 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17394
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17394

Output IDAT size = 17394 bytes (4060 bytes decrease)
Output file size = 17472 bytes (4084 bytes = 18.95% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-17-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35854 bytes
Input file size = 35980 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28142
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28142

Output IDAT size = 28142 bytes (7712 bytes decrease)
Output file size = 28220 bytes (7760 bytes = 21.57% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-18-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 42260 bytes
Input file size = 42398 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 39985
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 37602
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 37602

Output IDAT size = 37602 bytes (4658 bytes decrease)
Output file size = 37680 bytes (4718 bytes = 11.13% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-18-2.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16181 bytes
Input file size = 16271 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14594
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 14064
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 14064

Output IDAT size = 14064 bytes (2117 bytes decrease)
Output file size = 14142 bytes (2129 bytes = 13.08% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/MatchIt.Rcheck/vign_test/MatchIt/vignettes/assessing-balance_files/figure-html/unnamed-chunk-18-3.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20201 bytes
Input file size = 20303 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17001
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17001

Output IDAT size = 17001 bytes (3200 bytes decrease)
Output file size = 17079 bytes (3224 bytes = 15.88% decrease)

--- finished re-building ‘assessing-balance.Rmd’

--- re-building ‘estimating-effects.Rmd’ using rmarkdown_notangle

Quitting from lines 583-589 [unnamed-chunk-23] (estimating-effects.Rmd)
Error: processing vignette 'estimating-effects.Rmd' failed with diagnostics:
Assertion failed. One of the following must apply:
 * checkmate::check_character(hypothesis): Must comply to pattern '='
 * checkmate::check_numeric(hypothesis): Must be of type 'numeric', not 'character'
 * checkmate::check_formula(hypothesis): Must be a formula, not character
 * checkmate::check_matrix(hypothesis): Must be of type 'matrix', not 'character'
 * checkmate::check_function(hypothesis): Must be a function, not 'character'
 * checkmate::check_null(hypothesis): Must be NULL
--- failed re-building ‘estimating-effects.Rmd’

--- re-building ‘matching-methods.Rmd’ using rmarkdown_notangle
--- finished re-building ‘matching-methods.Rmd’

--- re-building ‘sampling-weights.Rmd’ using rmarkdown_notangle
--- finished re-building ‘sampling-weights.Rmd’

SUMMARY: processing the following file failed:
  ‘estimating-effects.Rmd’

Error: Vignette re-building failed.
Execution halted