Error(s) in re-building vignettes:
--- re-building ‘vignette.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-1-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 22281 bytes
Input file size = 23163 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21170
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21123
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21123

Output IDAT size = 21123 bytes (1158 bytes decrease)
Output file size = 21201 bytes (1962 bytes = 8.47% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-2-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19377 bytes
Input file size = 20259 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18323
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18323

Output IDAT size = 18323 bytes (1054 bytes decrease)
Output file size = 18401 bytes (1858 bytes = 9.17% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-3-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37082 bytes
Input file size = 37208 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27056
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27056

Output IDAT size = 27056 bytes (10026 bytes decrease)
Output file size = 27134 bytes (10074 bytes = 27.07% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-4-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 21344 bytes
Input file size = 22226 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20318
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 20287
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 20287

Output IDAT size = 20287 bytes (1057 bytes decrease)
Output file size = 20365 bytes (1861 bytes = 8.37% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-5-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19327 bytes
Input file size = 20209 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18234
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18234

Output IDAT size = 18234 bytes (1093 bytes decrease)
Output file size = 18312 bytes (1897 bytes = 9.39% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-6-1.png
672x672 pixels, 8 bits/pixel, 216 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 12099 bytes
Input file size = 12849 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10050
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10050

Output IDAT size = 10050 bytes (2049 bytes decrease)
Output file size = 10128 bytes (2721 bytes = 21.18% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-8-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44889 bytes
Input file size = 45027 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34971
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34971

Output IDAT size = 34971 bytes (9918 bytes decrease)
Output file size = 35049 bytes (9978 bytes = 22.16% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25360 bytes
Input file size = 26254 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22730
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 22656
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 22656

Output IDAT size = 22656 bytes (2704 bytes decrease)
Output file size = 22734 bytes (3520 bytes = 13.41% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 32438 bytes
Input file size = 33332 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 29655
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 29487
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 29200
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 28616
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 28616

Output IDAT size = 28616 bytes (3822 bytes decrease)
Output file size = 28694 bytes (4638 bytes = 13.91% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-1.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 80334 bytes
Input file size = 80520 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 61641
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 61641

Output IDAT size = 61641 bytes (18693 bytes decrease)
Output file size = 61719 bytes (18801 bytes = 23.35% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-2.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99213 bytes
Input file size = 99435 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 58250
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 58250

Output IDAT size = 58250 bytes (40963 bytes decrease)
Output file size = 58328 bytes (41107 bytes = 41.34% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-13-1.png
384x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 171387 bytes
Input file size = 171705 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116213
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116213

Output IDAT size = 116213 bytes (55174 bytes decrease)
Output file size = 116291 bytes (55414 bytes = 32.27% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-14-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 275248 bytes
Input file size = 275722 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 150241
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 150241

Output IDAT size = 150241 bytes (125007 bytes decrease)
Output file size = 150319 bytes (125403 bytes = 45.48% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-15-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 225581 bytes
Input file size = 225983 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116304
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116304

Output IDAT size = 116304 bytes (109277 bytes decrease)
Output file size = 116382 bytes (109601 bytes = 48.50% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-16-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 16986 bytes
Input file size = 17868 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15999
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15999

Output IDAT size = 15999 bytes (987 bytes decrease)
Output file size = 16077 bytes (1791 bytes = 10.02% decrease)


Quitting from lines 405-412 [unnamed-chunk-17] (vignette.Rmd)
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
'to' must be a finite number
--- failed re-building ‘vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘vignette.Rmd’

Error: Vignette re-building failed.
Execution halted