Error(s) in re-building vignettes:
--- re-building ‘vignette.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-1-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 17759 bytes
Input file size = 18641 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16704
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16704

Output IDAT size = 16704 bytes (1055 bytes decrease)
Output file size = 16782 bytes (1859 bytes = 9.97% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-2-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 22317 bytes
Input file size = 23199 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21414
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21347
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 21347

Output IDAT size = 21347 bytes (970 bytes decrease)
Output file size = 21425 bytes (1774 bytes = 7.65% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-3-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37082 bytes
Input file size = 37208 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27056
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27056

Output IDAT size = 27056 bytes (10026 bytes decrease)
Output file size = 27134 bytes (10074 bytes = 27.07% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-4-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19435 bytes
Input file size = 20317 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18426
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18426

Output IDAT size = 18426 bytes (1009 bytes decrease)
Output file size = 18504 bytes (1813 bytes = 8.92% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-5-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19137 bytes
Input file size = 20019 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18044
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18044

Output IDAT size = 18044 bytes (1093 bytes decrease)
Output file size = 18122 bytes (1897 bytes = 9.48% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-6-1.png
672x672 pixels, 8 bits/pixel, 215 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11649 bytes
Input file size = 12396 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9756
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9756

Output IDAT size = 9756 bytes (1893 bytes decrease)
Output file size = 9834 bytes (2562 bytes = 20.67% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-8-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44889 bytes
Input file size = 45027 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34971
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34971

Output IDAT size = 34971 bytes (9918 bytes decrease)
Output file size = 35049 bytes (9978 bytes = 22.16% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 28990 bytes
Input file size = 29884 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26191
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 25966
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 25802
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 25231
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 25231

Output IDAT size = 25231 bytes (3759 bytes decrease)
Output file size = 25309 bytes (4575 bytes = 15.31% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 36033 bytes
Input file size = 36939 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 33229
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 32890
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 31518
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 30796
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 30796

Output IDAT size = 30796 bytes (5237 bytes decrease)
Output file size = 30874 bytes (6065 bytes = 16.42% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-1.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81280 bytes
Input file size = 81466 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 62134
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 62134

Output IDAT size = 62134 bytes (19146 bytes decrease)
Output file size = 62212 bytes (19254 bytes = 23.63% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-12-2.png
672x624 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119367 bytes
Input file size = 119613 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 80999
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 80999

Output IDAT size = 80999 bytes (38368 bytes decrease)
Output file size = 81077 bytes (38536 bytes = 32.22% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-13-1.png
384x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 171387 bytes
Input file size = 171705 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116213
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116213

Output IDAT size = 116213 bytes (55174 bytes decrease)
Output file size = 116291 bytes (55414 bytes = 32.27% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-14-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 275248 bytes
Input file size = 275722 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 150241
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 150241

Output IDAT size = 150241 bytes (125007 bytes decrease)
Output file size = 150319 bytes (125403 bytes = 45.48% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-15-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 225581 bytes
Input file size = 225983 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116304
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 116304

Output IDAT size = 116304 bytes (109277 bytes decrease)
Output file size = 116382 bytes (109601 bytes = 48.50% decrease)

** Processing: /data/gannet/ripley/R/packages/tests-clang/CoSMoS.Rcheck/vign_test/CoSMoS/vignettes/vignette_files/figure-html/unnamed-chunk-16-1.png
672x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 16986 bytes
Input file size = 17868 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15999
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15999

Output IDAT size = 15999 bytes (987 bytes decrease)
Output file size = 16077 bytes (1791 bytes = 10.02% decrease)


Quitting from lines 405-412 [unnamed-chunk-17] (vignette.Rmd)
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
'to' must be a finite number
--- failed re-building ‘vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘vignette.Rmd’

Error: Vignette re-building failed.
Execution halted