Running ‘testthat.R’ [8m/15m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(CohortSymmetry)
  > 
  > test_check("CohortSymmetry")
  Note: method with signature 'DBIConnection#Id' chosen for function 'dbExistsTable',
   target signature 'duckdb_connection#Id'.
   "duckdb_connection#ANY" would also be valid
  ===========================>---   89% | ETA:  1s
  `days_prior_observation` casted to character.
  =======================>-------   78% | ETA:  1s
  ===========================>---   89% | ETA:  3s
  ===========================>---   89% | ETA:  1s
  ===========================>---   89% | ETA:  2s
  ===========================>---   89% | ETA:  1s
  `days_prior_observation` casted to character.
  ===========================>---   89% | ETA:  1s
  `days_prior_observation` casted to character.
  ===========================>---   89% | ETA:  1s
  -- 1 combination of 4 had index always before marker
  `days_prior_observation` casted to character.
  ===========================>---   89% | ETA:  1s
  -- 1 combination of 4 had index always before marker
  `days_prior_observation` casted to character.
  Joining with `by = join_by(result_id, cdm_name)`
  ===========================>---   89% | ETA:  1s
  `days_prior_observation` casted to character.
  Joining with `by = join_by(result_id, cdm_name)`
  ===========================>---   89% | ETA:  1s
  `days_prior_observation` casted to character.
  `days_prior_observation` casted to character.
  `days_prior_observation` casted to character.
  [ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
  
  ══ Skipped tests (53) ══════════════════════════════════════════════════════════
  • On CRAN (53): 'test-attrition.R:2:3', 'test-attrition.R:63:3',
    'test-attrition.R:149:3', 'test-attrition.R:310:3', 'test-attrition.R:397:3',
    'test-attrition.R:461:3', 'test-attrition.R:592:3', 'test-attrition.R:769:3',
    'test-displayTable.R:30:3', 'test-displayTable.R:58:3',
    'test-displayTable.R:86:3', 'test-eunomia.R:2:3', 'test-eunomia.R:65:3',
    'test-generateSequenceCohortSet.R:3:3',
    'test-generateSequenceCohortSet.R:20:3',
    'test-generateSequenceCohortSet.R:96:3',
    'test-generateSequenceCohortSet.R:153:3',
    'test-generateSequenceCohortSet.R:205:3',
    'test-generateSequenceCohortSet.R:259:3',
    'test-generateSequenceCohortSet.R:288:3',
    'test-generateSequenceCohortSet.R:330:3',
    'test-generateSequenceCohortSet.R:356:3',
    'test-generateSequenceCohortSet.R:427:3',
    'test-generateSequenceCohortSet.R:515:3',
    'test-generateSequenceCohortSet.R:663:3',
    'test-generateSequenceCohortSet.R:751:3',
    'test-generateSequenceCohortSet.R:764:3',
    'test-generateSequenceCohortSet.R:776:3',
    'test-generateSequenceCohortSet.R:788:3',
    'test-generateSequenceCohortSet.R:800:3',
    'test-generateSequenceCohortSet.R:818:3',
    'test-generateSequenceCohortSet.R:836:3',
    'test-generateSequenceCohortSet.R:848:3',
    'test-generateSequenceCohortSet.R:859:3',
    'test-generateSequenceCohortSet.R:870:3',
    'test-generateSequenceCohortSet.R:894:3', 'test-plotSequenceRatio.R:41:3',
    'test-plotSequenceRatio.R:85:3', 'test-plotTemporalSymmetry.R:42:3',
    'test-plotTemporalSymmetry.R:86:3', 'test-summariseSequenceRatios.R:203:3',
    'test-summariseSequenceRatios.R:415:3',
    'test-summariseSequenceRatios.R:522:3',
    'test-summariseSequenceRatios.R:604:3',
    'test-summariseSequenceRatios.R:763:3',
    'test-summariseSequenceRatios.R:801:3',
    'test-summariseSequenceRatios.R:839:3',
    'test-summariseSequenceRatios.R:877:3',
    'test-summariseTemporalSymmetry.R:73:3',
    'test-summariseTemporalSymmetry.R:98:3',
    'test-summariseTemporalSymmetry.R:156:3', 'test-test-dbs.R:2:3',
    'test-test-dbs.R:50:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-summariseTemporalSymmetry.R:30:3'): test summariseTemporalSymmetry ──
  is.na(unique(temporal_symmetry$estimate_value)) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 1 | WARN 139 | SKIP 53 | PASS 51 ]
  Error: Test failures
  Execution halted