Error(s) in re-building vignettes:
  ...
--- re-building ‘V1_Getting_started.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/cxr.Rcheck/vign_test/cxr/vignettes/V1_Getting_started_files/figure-html/unnamed-chunk-6-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14350 bytes
Input file size = 14440 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10914
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10914

Output IDAT size = 10914 bytes (3436 bytes decrease)
Output file size = 10992 bytes (3448 bytes = 23.88% decrease)


Quitting from lines 152-194 [unnamed-chunk-9] (V1_Getting_started.Rmd)
Error: processing vignette 'V1_Getting_started.Rmd' failed with diagnostics:
'names' attribute [3] must be the same length as the vector [0]
--- failed re-building ‘V1_Getting_started.Rmd’

--- re-building ‘V2_Data_formats.Rmd’ using rmarkdown
neigh_list                 package:cxr                 R Documentation

_n_e_i_g_h_b_o_u_r_s _a_n_d _f_i_t_n_e_s_s _o_b_s_e_r_v_a_t_i_o_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     A dataset containing fitness and neighbours for plant individuals
     of 17 species. The dataset is a named list with 16 elements, each
     of which is a dataframe with the following columns:

        • obs_ID: unique identifier for each observation

        • fitness: number of viable seeds of the focal individual

        • 17 columns indicating the number of neighbours from each
          plant sp. in a radius of 7.5 cm from the focal individual

_U_s_a_g_e:

     data(neigh_list)
     
_F_o_r_m_a_t:

     A list with 17 elements, each of which a dataframe of variable
     number of rows and 18 columns

_N_o_t_e:

     For details, see Lanuza et al. 2018 Ecology Letters.


--- finished re-building ‘V2_Data_formats.Rmd’

--- re-building ‘V3_Coexistence_metrics.Rmd’ using rmarkdown

Quitting from lines 80-87 [unnamed-chunk-3] (V3_Coexistence_metrics.Rmd)
Error: processing vignette 'V3_Coexistence_metrics.Rmd' failed with diagnostics:
no input has determined the number of cases
--- failed re-building ‘V3_Coexistence_metrics.Rmd’

--- re-building ‘V4_Models.Rmd’ using rmarkdown
--- finished re-building ‘V4_Models.Rmd’

--- re-building ‘V5_Abundance_projections.Rmd’ using rmarkdown

Quitting from lines 110-120 [unnamed-chunk-4] (V5_Abundance_projections.Rmd)
Error: processing vignette 'V5_Abundance_projections.Rmd' failed with diagnostics:
replacement has 2 rows, data has 0
--- failed re-building ‘V5_Abundance_projections.Rmd’

--- re-building ‘V6_Metapopulation_projections.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/cxr.Rcheck/vign_test/cxr/vignettes/V6_Metapopulation_projections_files/figure-html/unnamed-chunk-10-1.png
672x864 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 165420 bytes
Input file size = 165738 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 157336
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 157336

Output IDAT size = 157336 bytes (8084 bytes decrease)
Output file size = 157414 bytes (8324 bytes = 5.02% decrease)

--- finished re-building ‘V6_Metapopulation_projections.Rmd’

SUMMARY: processing the following files failed:
  ‘V1_Getting_started.Rmd’ ‘V3_Coexistence_metrics.Rmd’
  ‘V5_Abundance_projections.Rmd’

Error: Vignette re-building failed.
Execution halted