Error(s) in re-building vignettes:
  ...
--- re-building ‘Custom_Plots.Rmd’ using knitr
Failed with error:  'there is no package called 'binsegRcpp''
Failed with error:  'there is no package called 'LOPART''
** Processing: figure/unnamed-chunk-1-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28503 bytes
Input file size = 28617 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24791
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24791

Output IDAT size = 24791 bytes (3712 bytes decrease)
Output file size = 24869 bytes (3748 bytes = 13.10% decrease)

Failed with error:  'there is no package called 'binsegRcpp''
Failed with error:  'there is no package called 'LOPART''
** Processing: figure/unnamed-chunk-2-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29246 bytes
Input file size = 29360 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25237
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25237

Output IDAT size = 25237 bytes (4009 bytes decrease)
Output file size = 25315 bytes (4045 bytes = 13.78% decrease)

Failed with error:  'there is no package called 'binsegRcpp''
Failed with error:  'there is no package called 'LOPART''
** Processing: figure/unnamed-chunk-3-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29477 bytes
Input file size = 29591 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26440
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26440

Output IDAT size = 26440 bytes (3037 bytes decrease)
Output file size = 26518 bytes (3073 bytes = 10.38% decrease)

--- finished re-building ‘Custom_Plots.Rmd’

--- re-building ‘Custom_References.Rmd’ using knitr

Quitting from lines 28-61 [unnamed-chunk-1] (Custom_References.Rmd)
Error: processing vignette 'Custom_References.Rmd' failed with diagnostics:
there is no package called 'binsegRcpp'
--- failed re-building ‘Custom_References.Rmd’

--- re-building ‘Custom_Units.Rmd’ using knitr
** Processing: figure/unnamed-chunk-2-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30215 bytes
Input file size = 30329 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25836
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25836

Output IDAT size = 25836 bytes (4379 bytes decrease)
Output file size = 25914 bytes (4415 bytes = 14.56% decrease)

** Processing: figure/unnamed-chunk-3-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46923 bytes
Input file size = 47061 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 39731
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 39731

Output IDAT size = 39731 bytes (7192 bytes decrease)
Output file size = 39809 bytes (7252 bytes = 15.41% decrease)

** Processing: figure/unnamed-chunk-7-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32640 bytes
Input file size = 32754 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27463
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27463

Output IDAT size = 27463 bytes (5177 bytes decrease)
Output file size = 27541 bytes (5213 bytes = 15.92% decrease)

Warning in (function (..., deparse.level = 1)  :
  number of rows of result is not a multiple of vector length (arg 2)
** Processing: figure/unnamed-chunk-8-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 40694 bytes
Input file size = 40820 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34233
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34233

Output IDAT size = 34233 bytes (6461 bytes decrease)
Output file size = 34311 bytes (6509 bytes = 15.95% decrease)

--- finished re-building ‘Custom_Units.Rmd’

--- re-building ‘cum_median.Rmd’ using knitr
Failed with error:  'there is no package called 'binsegRcpp''
** Processing: figure/unnamed-chunk-1-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21108 bytes
Input file size = 21210 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18044
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18044

Output IDAT size = 18044 bytes (3064 bytes decrease)
Output file size = 18122 bytes (3088 bytes = 14.56% decrease)

** Processing: figure/unnamed-chunk-2-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31694 bytes
Input file size = 31808 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28681
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28681

Output IDAT size = 28681 bytes (3013 bytes decrease)
Output file size = 28759 bytes (3049 bytes = 9.59% decrease)

--- finished re-building ‘cum_median.Rmd’

--- re-building ‘regex.Rmd’ using knitr
** Processing: figure/unnamed-chunk-1-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27223 bytes
Input file size = 27337 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 25282
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 25282

Output IDAT size = 25282 bytes (1941 bytes decrease)
Output file size = 25360 bytes (1977 bytes = 7.23% decrease)

Failed with error:  'there is no package called 're2''
** Processing: figure/unnamed-chunk-2-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30306 bytes
Input file size = 30420 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 28667
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 28667

Output IDAT size = 28667 bytes (1639 bytes decrease)
Output file size = 28745 bytes (1675 bytes = 5.51% decrease)

** Processing: figure/unnamed-chunk-4-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27317 bytes
Input file size = 27431 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24488
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24488

Output IDAT size = 24488 bytes (2829 bytes decrease)
Output file size = 24566 bytes (2865 bytes = 10.44% decrease)

Failed with error:  'there is no package called 're2''
** Processing: figure/unnamed-chunk-5-1.png
504x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26725 bytes
Input file size = 26839 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 24843
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 24843

Output IDAT size = 24843 bytes (1882 bytes decrease)
Output file size = 24921 bytes (1918 bytes = 7.15% decrease)

--- finished re-building ‘regex.Rmd’

SUMMARY: processing the following file failed:
  ‘Custom_References.Rmd’

Error: Vignette re-building failed.
Execution halted