Error(s) in re-building vignettes:
  ...
--- re-building ‘pseudo.Rmd’ using rmarkdown

Quitting from lines 18-32 [unnamed-chunk-1] (pseudo.Rmd)
Error: processing vignette 'pseudo.Rmd' failed with diagnostics:
there is no package called 'survey'
--- failed re-building ‘pseudo.Rmd’

--- re-building ‘ridge.Rmd’ using rmarkdown
--- finished re-building ‘ridge.Rmd’

--- re-building ‘royston.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/royston_files/figure-html/termplot-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11569 bytes
Input file size = 12439 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10519
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10519
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 10519

Output IDAT size = 10519 bytes (1050 bytes decrease)
Output file size = 10597 bytes (1842 bytes = 14.81% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/royston_files/figure-html/hist1-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21728 bytes
Input file size = 21830 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17866
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17866

Output IDAT size = 17866 bytes (3862 bytes decrease)
Output file size = 17944 bytes (3886 bytes = 17.80% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/royston_files/figure-html/fig2-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 41512 bytes
Input file size = 41650 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30917
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30917

Output IDAT size = 30917 bytes (10595 bytes decrease)
Output file size = 30995 bytes (10655 bytes = 25.58% decrease)

--- finished re-building ‘royston.Rmd’

--- re-building ‘tutorial.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/aids-1.png
288x216 pixels, 8 bits/pixel, 219 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 1904 bytes
Input file size = 2651 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 1622
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 1622

Output IDAT size = 1622 bytes (282 bytes decrease)
Output file size = 1700 bytes (951 bytes = 35.87% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-putter1-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23875 bytes
Input file size = 23977 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19912
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19912

Output IDAT size = 19912 bytes (3963 bytes decrease)
Output file size = 19990 bytes (3987 bytes = 16.63% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T2-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 9266 bytes
Input file size = 10136 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 8053
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 8053

Output IDAT size = 8053 bytes (1213 bytes decrease)
Output file size = 8131 bytes (2005 bytes = 19.78% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T3-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 12025 bytes
Input file size = 12895 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10844
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 10844

Output IDAT size = 10844 bytes (1181 bytes decrease)
Output file size = 10922 bytes (1973 bytes = 15.30% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T4-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10646 bytes
Input file size = 11516 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9551
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 9551

Output IDAT size = 9551 bytes (1095 bytes decrease)
Output file size = 9629 bytes (1887 bytes = 16.39% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-cuminc-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23283 bytes
Input file size = 23385 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19571
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19571

Output IDAT size = 19571 bytes (3712 bytes decrease)
Output file size = 19649 bytes (3736 bytes = 15.98% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T5-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 14924 bytes
Input file size = 15794 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13163
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 13134
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 13134

Output IDAT size = 13134 bytes (1790 bytes decrease)
Output file size = 13212 bytes (2582 bytes = 16.35% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T8-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27736 bytes
Input file size = 27850 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24241
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24241

Output IDAT size = 24241 bytes (3495 bytes decrease)
Output file size = 24319 bytes (3531 bytes = 12.68% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T9-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28448 bytes
Input file size = 28562 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24297
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24297

Output IDAT size = 24297 bytes (4151 bytes decrease)
Output file size = 24375 bytes (4187 bytes = 14.66% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T13-1.png
384x288 pixels, 8 bits/pixel, 250 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4340 bytes
Input file size = 5180 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 3926
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 3918
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 3918

Output IDAT size = 3918 bytes (422 bytes decrease)
Output file size = 3996 bytes (1184 bytes = 22.86% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-data1b-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26663 bytes
Input file size = 26777 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21217
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21217

Output IDAT size = 21217 bytes (5446 bytes decrease)
Output file size = 21295 bytes (5482 bytes = 20.47% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T14-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 13216 bytes
Input file size = 14086 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 12038
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 12038

Output IDAT size = 12038 bytes (1178 bytes decrease)
Output file size = 12116 bytes (1970 bytes = 13.99% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/unnamed-chunk-2-1.png
672x504 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45203 bytes
Input file size = 45341 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35073
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35073

Output IDAT size = 35073 bytes (10130 bytes decrease)
Output file size = 35151 bytes (10190 bytes = 22.47% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fourstate-1.png
480x360 pixels, 8 bits/pixel, 251 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4950 bytes
Input file size = 5793 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 4284
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4284
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4284

Output IDAT size = 4284 bytes (666 bytes decrease)
Output file size = 4362 bytes (1431 bytes = 24.70% decrease)

** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/survivalVignettes.Rcheck/vign_test/survivalVignettes/vignettes/tutorial_files/figure-html/fig-T15-1.png
672x504 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 15654 bytes
Input file size = 16524 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13867
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13867

Output IDAT size = 13867 bytes (1787 bytes decrease)
Output file size = 13945 bytes (2579 bytes = 15.61% decrease)

--- finished re-building ‘tutorial.Rmd’

SUMMARY: processing the following file failed:
  ‘pseudo.Rmd’

Error: Vignette re-building failed.
Execution halted