Running ‘testthat.R’ [27s/336s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(read.gt3x)
  > 
  > test_check("read.gt3x")
  trying URL 'https://github.com/THLfi/read.gt3x/releases/download/v1.0/EE_left_29.5.2017-05-30.gt3x.zip'
  Content type 'application/octet-stream' length 126907117 bytes (121.0 MB)
  =================================================
  downloaded 119.6 MB
  
  trying URL 'https://ndownloader.figshare.com/files/21855801'
  Content type 'application/gzip' length 6650300 bytes (6.3 MB)
  ==================================================
  downloaded 6.3 MB
  
  trying URL 'https://ndownloader.figshare.com/files/25557302'
  Content type 'application/gzip' length 6094528 bytes (5.8 MB)
  ==================================================
  downloaded 5.8 MB
  
  GT3X information
   $ Serial Number     :"MRA1DXXXXXXXX"
   $ Device Type       :"ActiSleepPlus"
   $ Firmware          :"2.4.0"
   $ Battery Voltage   :"4.2"
   $ Sample Rate       :30
   $ Start Date        : POSIXct, format: "2012-04-04 13:29:00"
   $ Stop Date         : POSIXct, format: "2012-04-05 13:29:00"
   $ Download Date     : POSIXct, format: "2012-04-05 16:19:16"
   $ Board Revision    :"3"
   $ Subject Name      :"ActiSleepPlus"
   $ Sex               :"Male"
   $ Height            :"172.72"
   $ Mass              :"69.8532250385783"
   $ Age               :"42"
   $ Race              :"White / Caucasian"
   $ Limb              :"Wrist"
   $ Side              :"Right"
   $ Dominance         :"Dominant"
   $ DateOfBirth       :"621132192000000000"
   $ Serial Prefix     :"MRA"
   $ Last Sample Time  : 'POSIXct' num(0) 
   - attr(*, "tzone")= chr "GMT"
   $ Acceleration Scale:341
   $ Acceleration Min  :"-6.0"
   $ Acceleration Max  :"6.0"
  Sample size: 2592000
  Scaling...
  Lux Sample size: 2592000
  Sampling Rate: 30Hz
  Firmware Version: 2.4.0
  Serial Number Prefix: MRA
            X      Y      Z
  [1,] -0.935 -0.320 -0.141
  [2,] -0.974 -0.270 -0.220
  [3,] -0.891 -0.279 -0.167
  [4,] -0.862 -0.249 -0.196
  [5,] -0.877 -0.205 -0.393
  [6,] -0.534 -0.246 -0.595
  Sampling Rate: 30Hz
  Firmware Version: 2.4.0
  Serial Number Prefix: MRA
                   time      X      Y      Z
  1 2012-04-04 13:29:00 -0.935 -0.320 -0.141
  2 2012-04-04 13:29:00 -0.974 -0.270 -0.220
  3 2012-04-04 13:29:00 -0.891 -0.279 -0.167
  4 2012-04-04 13:29:00 -0.862 -0.249 -0.196
  5 2012-04-04 13:29:00 -0.877 -0.205 -0.393
  6 2012-04-04 13:29:00 -0.534 -0.246 -0.595
  GT3X information
   $ Serial Number     :"MRA1DXXXXXXXX"
   $ Device Type       :"ActiSleepPlus"
   $ Firmware          :"2.4.0"
   $ Battery Voltage   :"4.2"
   $ Sample Rate       :30
   $ Start Date        : POSIXct, format: "2012-04-04 13:29:00"
   $ Stop Date         : POSIXct, format: "2012-04-05 13:29:00"
   $ Download Date     : POSIXct, format: "2012-04-05 16:19:16.831"
   $ Board Revision    :"3"
   $ Subject Name      :"ActiSleepPlus"
   $ Sex               :"Male"
   $ Height            :"172.72"
   $ Mass              :"69.8532250385783"
   $ Age               :"42"
   $ Race              :"White / Caucasian"
   $ Limb              :"Wrist"
   $ Side              :"Right"
   $ Dominance         :"Dominant"
   $ DateOfBirth       :"621132192000000000"
   $ Serial Prefix     :"MRA"
   $ Last Sample Time  : 'POSIXct' num(0) 
   - attr(*, "tzone")= chr "GMT"
   $ Acceleration Scale:341
   $ Acceleration Min  :"-6.0"
   $ Acceleration Max  :"6.0"
  Sample size: 2592000
  Scaling...
  Lux Sample size: 2592000
  GT3X information
   $ Serial Number     :"MRA1DXXXXXXXX"
   $ Device Type       :"ActiSleepPlus"
   $ Firmware          :"2.4.0"
   $ Battery Voltage   :"4.2"
   $ Sample Rate       :30
   $ Start Date        : POSIXct, format: "2012-04-04 13:29:00"
   $ Stop Date         : POSIXct, format: "2012-04-05 13:29:00"
   $ Download Date     : POSIXct, format: "2012-04-05 16:19:16.831"
   $ Board Revision    :"3"
   $ Subject Name      :"ActiSleepPlus"
   $ Sex               :"Male"
   $ Height            :"172.72"
   $ Mass              :"69.8532250385783"
   $ Age               :"42"
   $ Race              :"White / Caucasian"
   $ Limb              :"Wrist"
   $ Side              :"Right"
   $ Dominance         :"Dominant"
   $ DateOfBirth       :"621132192000000000"
   $ Serial Prefix     :"MRA"
   $ Last Sample Time  : 'POSIXct' num(0) 
   - attr(*, "tzone")= chr "GMT"
   $ Acceleration Scale:341
   $ Acceleration Min  :"-6.0"
   $ Acceleration Max  :"6.0"
  Sample size: 2592000
  Scaling...
  Lux Sample size: 2592000
  trying URL 'https://github.com/THLfi/read.gt3x/files/3522749/GT3X%2B.01.day.gt3x.zip'
  Content type 'application/zip' length 3670545 bytes (3.5 MB)
  ==================================================
  downloaded 3.5 MB
  
  GT3X information
   $ Serial Number     :"NEO1DXXXXXXXX"
   $ Device Type       :"GT3XPlus"
   $ Firmware          :"2.5.0"
   $ Battery Voltage   :"4.22"
   $ Sample Rate       :30
   $ Start Date        : POSIXct, format: "2012-06-27 10:54:00"
   $ Stop Date         : POSIXct, format: "2012-06-28 11:54:00"
   $ Download Date     : POSIXct, format: "2012-06-28 16:25:52.814"
   $ Board Revision    :"4"
   $ Unexpected Resets :"0"
   $ Sex               :"Male"
   $ Height            :"172.72"
   $ Mass              :"69.8532249799612"
   $ Age               :"43"
   $ Race              :"White / Caucasian"
   $ Limb              :"Ankle"
   $ Side              :"Left"
   $ Dominance         :"Non-Dominant"
   $ DateOfBirth       :"621132192000000000"
   $ Subject Name      :"GT3XPlus"
   $ Serial Prefix     :"NEO"
   $ Last Sample Time  : 'POSIXct' num(0) 
   - attr(*, "tzone")= chr "GMT"
   $ Acceleration Scale:341
   $ Acceleration Min  :"-6.0"
   $ Acceleration Max  :"6.0"
  Sample size: 2700000
  Scaling...
  Lux Sample size: 2700000
  Sampling Rate: 30Hz
  Firmware Version: 2.5.0
  Serial Number Prefix: NEO
       X Y Z
  [1,] 0 0 0
  [2,] 0 0 0
  [3,] 0 0 0
  [4,] 0 0 0
  [5,] 0 0 0
  [6,] 0 0 0
  Sampling Rate: 30Hz
  Firmware Version: 2.5.0
  Serial Number Prefix: NEO
                   time X Y Z
  1 2012-06-27 10:54:00 0 0 0
  2 2012-06-27 10:54:00 0 0 0
  3 2012-06-27 10:54:00 0 0 0
  4 2012-06-27 10:54:00 0 0 0
  5 2012-06-27 10:54:00 0 0 0
  6 2012-06-27 10:54:00 0 0 0
  GT3X information
   $ Serial Number     :"NEO1DXXXXXXXX"
   $ Device Type       :"GT3XPlus"
   $ Firmware          :"2.5.0"
   $ Battery Voltage   :"4.22"
   $ Sample Rate       :30
   $ Start Date        : POSIXct, format: "2012-06-27 10:54:00"
   $ Stop Date         : POSIXct, format: "2012-06-28 11:54:00"
   $ Download Date     : POSIXct, format: "2012-06-28 16:25:52.814"
   $ Board Revision    :"4"
   $ Unexpected Resets :"0"
   $ Sex               :"Male"
   $ Height            :"172.72"
   $ Mass              :"69.8532249799612"
   $ Age               :"43"
   $ Race              :"White / Caucasian"
   $ Limb              :"Ankle"
   $ Side              :"Left"
   $ Dominance         :"Non-Dominant"
   $ DateOfBirth       :"621132192000000000"
   $ Subject Name      :"GT3XPlus"
   $ Serial Prefix     :"NEO"
   $ Last Sample Time  : 'POSIXct' num(0) 
   - attr(*, "tzone")= chr "GMT"
   $ Acceleration Scale:341
   $ Acceleration Min  :"-6.0"
   $ Acceleration Max  :"6.0"
  Sample size: 2700000
  Scaling...
  Lux Sample size: 2700000
  $name_gt3x
  [1] "PU3_CLE2B21130054_2017-03-16.gt3x.gz"
  
  $download_url_gt3x
  [1] "https://ndownloader.figshare.com/files/21855807"
  
  $id
  [1] "PU3"
  
  $serial
  [1] "CLE2B21130054"
  
  $name_csv
  [1] "PU3_CLE2B21130054_2017-03-16.csv.gz"
  
  $download_url_csv
  [1] "https://ndownloader.figshare.com/files/24488492"
  
  GT3X information
   $ Serial Number     :"TAS1H30182785"
   $ Device Type       :"Link"
   $ Firmware          :"1.7.2"
   $ Battery Voltage   :"4.18"
   $ Sample Rate       :100
   $ Start Date        : POSIXct, format: "2019-09-17 18:40:00"
   $ Stop Date         : POSIXct, format: "2019-09-18 19:00:00"
   $ Last Sample Time  : POSIXct, format: "2019-09-17 19:20:05"
   $ TimeZone          :"-04:00:00"
   $ Download Date     : POSIXct, format: "2019-09-17 19:20:05"
   $ Board Revision    :"8"
   $ Unexpected Resets :"0"
   $ Acceleration Scale:256
   $ Acceleration Min  :"-8.0"
   $ Acceleration Max  :"8.0"
   $ Subject Name      :"suffix_85"
   $ Serial Prefix     :"TAS"
  Reading Stream...
  ---GT3X PARAMETERS
  address: 0 key: 6 value: 1
  address: 0 key: 7 value: 54703161
  address: 0 key: 8 value: 8
  address: 0 key: 9 value: 1534154836
  address: 0 key: 13 value: 17235970
  address: 0 key: 16 value: 3791650816
  address: 0 key: 20 value: 0
  address: 0 key: 21 value: 0
  address: 0 key: 22 value: 0
  address: 0 key: 23 value: 0
  address: 0 key: 26 value: 2
  address: 0 key: 28 value: 262013
  address: 0 key: 29 value: 255
  address: 0 key: 32 value: 16908288
  address: 0 key: 37 value: 1024
  address: 0 key: 38 value: 0
  address: 0 key: 49 value: 2048
  address: 0 key: 50 value: 88181047
  address: 0 key: 51 value: 6.82667
  address: 0 key: 55 value: 256
  address: 0 key: 57 value: 333.87
  address: 0 key: 58 value: 21
  address: 0 key: 61 value: 2
  address: 1 key: 0 value: 0
  address: 1 key: 1 value: 872668711
  address: 1 key: 2 (features)  value: 388
  address: 1 key: 3 value: 1
  address: 1 key: 4 value: 4294967131
  address: 1 key: 5 value: 4294967095
  address: 1 key: 6 value: 4294967149
  address: 1 key: 7 value: 298
  address: 1 key: 8 value: 286
  address: 1 key: 9 value: 300
  address: 1 key: 10 value: 100
  address: 1 key: 12 (start time)  value: 1568745600
  address: 1 key: 13 value: 1568833200
  address: 1 key: 14 value: 1568745556
  address: 1 key: 15 value: 74
  address: 1 key: 16 value: 40
  address: 1 key: 17 value: 72
  address: 1 key: 20 value: 0
  address: 1 key: 21 value: 0
  address: 1 key: 33 value: 60000
  address: 1 key: 34 value: 4294965247
  address: 1 key: 35 value: 4294965190
  address: 1 key: 36 value: 4294965237
  address: 1 key: 37 value: 2051
  address: 1 key: 38 value: 2000
  address: 1 key: 39 value: 2048
  address: 1 key: 40 value: 0
  address: 1 key: 41 value: 1
  address: 1 key: 42 value: 0
  address: 1 key: 43 value: 4294967283
  address: 1 key: 44 value: 0
  address: 1 key: 45 value: 0
  address: 1 key: 46 value: 0
  ---END PARAMETERS
  
  param_start_time: 1568745600
  First ACTIVTY2 packet, sample size: 100
  imputing 400 values at index 1000 
  imputing 10500 values at index 26100 
  imputing 55400 values at index 37700 
  imputing 112600 values at index 94500 
  imputing 3300 values at index 209700 
  imputing 100 values at index 214000 
  Activity with Sample Size of 0
  payload start: 1568747741
  total_records: 214100
  max_samples: 240500
  imputing 100 values at index 214100 
  imputing 500 values at index 214200 
  Activity with Sample Size of 0
  payload start: 1568747759
  total_records: 215900
  max_samples: 240500
  imputing 100 values at index 215900 
  Total Records: 216000
  Scaling...
  imputing 24500 values at index 216000 
  Creating dimnames 
  CPP returning 
  [ FAIL 1 | WARN 2 | SKIP 4 | PASS 69 ]
  
  ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
  • On CRAN (4): 'test-index_out_of_bounds.R:4:3',
    'test-index_out_of_bounds.R:28:3', 'test-reordering.R:28:3',
    'test-reordering.R:109:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-datapath.R:2:3'): Getting datapath ─────────────────────────────
  Error in `download.file(url, temp, method = "auto", quiet = !verbose, mode = "wb")`: download from 'https://github.com/THLfi/read.gt3x/releases/download/v1.0/EE_left_29.5.2017-05-30.gt3x.zip' failed
  Backtrace:
      ▆
   1. └─read.gt3x::gt3x_datapath() at test-datapath.R:2:3
   2.   └─read.gt3x::gt3x_download(...)
   3.     └─utils::download.file(...)
  
  [ FAIL 1 | WARN 2 | SKIP 4 | PASS 69 ]
  Error: Test failures
  Execution halted