Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  LCBD_pq.Rd: phyloseq-class
  SRS_curve_pq.Rd: phyloseq-class
  accu_plot.Rd: phyloseq-class, ggplot
  accu_plot_balanced_modality.Rd: phyloseq-class
  add_blast_info.Rd: phyloseq-class
  add_dna_to_phyloseq.Rd: phyloseq-class
  add_funguild_info.Rd: phyloseq-class
  add_info_to_sam_data.Rd: phyloseq-class
  add_new_taxonomy_pq.Rd: phyloseq-class
  adonis_pq.Rd: phyloseq-class
  adonis_rarperm_pq.Rd: phyloseq-class
  ancombc_pq.Rd: phyloseq-class
  are_modality_even_depth.Rd: phyloseq-class
  as_binary_otu_table.Rd: phyloseq-class
  asv2otu.Rd: phyloseq-class
  biplot_pq.Rd: phyloseq-class
  blast_pq.Rd: phyloseq-class
  blast_to_derep.Rd: derep-class
  blast_to_phyloseq.Rd: phyloseq-class
  build_phytree_pq.Rd: phyloseq-class
  circle_pq.Rd: phyloseq-class
  clean_pq.Rd: phyloseq-class
  compare_pairs_pq.Rd: phyloseq-class
  dist_pos_control.Rd: phyloseq-class
  distri_1_taxa.Rd: phyloseq-class
  filter_asv_blast.Rd: phyloseq-class
  formattable_pq.Rd: phyloseq-class
  get_file_extension.Rd: phyloseq-class
  ggaluv_pq.Rd: phyloseq-class
  ggbetween_pq.Rd: phyloseq-class
  ggscatt_pq.Rd: phyloseq-class
  ggvenn_pq.Rd: phyloseq-class, ggplot
  glmutli_pq.Rd: phyloseq-class
  graph_test_pq.Rd: phyloseq-class, ggplot
  heat_tree_pq.Rd: phyloseq-class
  hill_pq.Rd: phyloseq-class
  hill_test_rarperm_pq.Rd: phyloseq-class
  hill_tuckey_pq.Rd: phyloseq-class
  iNEXT_pq.Rd: phyloseq-class
  krona.Rd: phyloseq-class
  lulu_pq.Rd: phyloseq-class
  multi_biplot_pq.Rd: phyloseq-class
  multipatt_pq.Rd: phyloseq-class
  multitax_bar_pq.Rd: phyloseq-class
  mumu_pq.Rd: phyloseq-class
  normalize_prop_pq.Rd: phyloseq-class
  phyloseq_to_edgeR.Rd: phyloseq-class
  physeq_or_string_to_dna.Rd: phyloseq-class
  plot_LCBD_pq.Rd: phyloseq-class
  plot_SCBD_pq.Rd: phyloseq-class
  plot_ancombc_pq.Rd: phyloseq-class
  plot_deseq2_pq.Rd: phyloseq-class, ggplot
  plot_edgeR_pq.Rd: phyloseq-class, ggplot
  plot_guild_pq.Rd: phyloseq-class
  plot_mt.Rd: ggplot
  plot_tax_pq.Rd: phyloseq-class
  plot_tsne_pq.Rd: phyloseq-class
  psmelt_samples_pq.Rd: phyloseq-class
  rarefy_sample_count_by_modality.Rd: phyloseq-class
  rename_samples_otu_table.Rd: phyloseq-class
  reorder_taxa_pq.Rd: phyloseq-class
  ridges_pq.Rd: phyloseq-class, ggplot
  rotl_pq.Rd: phyloseq-class
  sankey_pq.Rd: phyloseq-class
  save_pq.Rd: phyloseq-class
  search_exact_seq_pq.Rd: phyloseq-class
  select_one_sample.Rd: phyloseq-class
  simplify_taxo.Rd: phyloseq-class
  subset_samples_pq.Rd: phyloseq-class
  subset_taxa_pq.Rd: phyloseq-class
  subset_taxa_tax_control.Rd: phyloseq-class
  summary_plot_pq.Rd: phyloseq-class
  swarm_clustering.Rd: phyloseq-class
  tax_bar_pq.Rd: phyloseq-class, ggplot
  tax_datatable.Rd: phyloseq-class
  taxa_as_columns.Rd: phyloseq-class
  taxa_as_rows.Rd: phyloseq-class
  taxa_only_in_one_level.Rd: phyloseq-class
  tbl_sum_samdata.Rd: phyloseq-class
  treemap_pq.Rd: phyloseq-class
  tsne_pq.Rd: phyloseq-class
  upset_pq.Rd: phyloseq-class, ggplot
  upset_test_pq.Rd: phyloseq-class, ggplot
  var_par_pq.Rd: phyloseq-class
  var_par_rarperm_pq.Rd: phyloseq-class
  venn_pq.Rd: phyloseq-class, ggplot
  verify_pq.Rd: phyloseq-class
  vs_search_global.Rd: phyloseq-class
  vsearch_clustering.Rd: phyloseq-class
  write_pq.Rd: phyloseq-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.