Running ‘spelling.R’ [0s/0s]
  Running ‘testthat.R’ [15s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library("testthat", warn.conflicts = FALSE)
  > library("TreeDist")
  > 
  > test_check("TreeDist")
  [ FAIL 1 | WARN 0 | SKIP 5 | PASS 1374 ]
  
  ══ Skipped tests (5) ═══════════════════════════════════════════════════════════
  • On CRAN (5): 'test-MSTSegments.R:4:3', 'test-Plot3.R:6:3',
    'test-VisualizeMatching.R:26:3', 'test-VisualizeMatching.R:117:3',
    'test-plot.R:30:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-different-tips.R:48:3'): Non-identical tips handled okay ───────
  Error in `RenumberTips.phylo(x, tipLabels)`: Tree labels t1, t2, t3, t4, t5, t6, t7, t8 missing from `tipOrder`
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-different-tips.R:48:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. └─TreeDist::MutualClusteringInfo(fullList, fullList)
    5.   └─TreeDist::CalculateTreeDistance(...)
    6.     └─TreeDist:::.SplitDistanceManyMany(...)
    7.       ├─TreeTools::as.Splits(splits1, tipLabels = tipLabels, asSplits = TRUE)
    8.       └─TreeTools:::as.Splits.list(splits1, tipLabels = tipLabels, asSplits = TRUE)
    9.         └─base::lapply(...)
   10.           └─TreeTools (local) FUN(X[[i]], ...)
   11.             ├─TreeTools::as.Splits(...)
   12.             └─TreeTools:::as.Splits.phylo(...)
   13.               ├─TreeTools::RenumberTips(x, tipLabels)
   14.               └─TreeTools:::RenumberTips.phylo(x, tipLabels)
  
  [ FAIL 1 | WARN 0 | SKIP 5 | PASS 1374 ]
  Deleting unused snapshots:
  • Plot3/plotting-order.svg
  • VisualizeMatching/jrf-vm-matchzeros-false.svg
  • VisualizeMatching/rf-collapse-a-node.svg
  • VisualizeMatching/rf-collapse-and-change.svg
  • VisualizeMatching/rf-vm-single-splits-plainedges.svg
  • VisualizeMatching/test-vmr.svg
  • VisualizeMatching/visualize-mci-matching.svg
  • VisualizeMatching/vm-one-rooted.svg
  • plot/test-lc-letters.svg
  • plot/test-uc-letters.svg
  • plot/test-without-space.svg
  Error: Test failures
  Execution halted