Error(s) in re-building vignettes:
  ...
--- re-building ‘eQTL_outline.Rmd’ using rmarkdown
--- finished re-building ‘eQTL_outline.Rmd’

--- re-building ‘intro_correlations.Rmd’ using rmarkdown
--- finished re-building ‘intro_correlations.Rmd’

--- re-building ‘intro_mash.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mashr.Rcheck/vign_test/mashr/vignettes/intro_mash_files/figure-html/unnamed-chunk-11-1.png
480x384 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7300 bytes
Input file size = 8158 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 6455
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 6455

Output IDAT size = 6455 bytes (845 bytes decrease)
Output file size = 6533 bytes (1625 bytes = 19.92% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mashr.Rcheck/vign_test/mashr/vignettes/intro_mash_files/figure-html/unnamed-chunk-12-1.png
480x384 pixels, 4x8 bits/pixel, RGB+alpha
Reducing image to 2x8 bits/pixel, grayscale+alpha
Input IDAT size = 6396 bytes
Input file size = 6474 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 4368
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4209
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 4209

Output IDAT size = 4209 bytes (2187 bytes decrease)
Output file size = 4287 bytes (2187 bytes = 33.78% decrease)

--- finished re-building ‘intro_mash.Rmd’

--- re-building ‘intro_mash_dd.Rmd’ using rmarkdown
--- finished re-building ‘intro_mash_dd.Rmd’

--- re-building ‘intro_mashbaselinemean.Rmd’ using rmarkdown

Quitting from lines 19-21 [unnamed-chunk-1] (intro_mashbaselinemean.Rmd)
Error: processing vignette 'intro_mashbaselinemean.Rmd' failed with diagnostics:
there is no package called 'kableExtra'
--- failed re-building ‘intro_mashbaselinemean.Rmd’

--- re-building ‘intro_mashcommonbaseline.Rmd’ using rmarkdown
--- finished re-building ‘intro_mashcommonbaseline.Rmd’

--- re-building ‘mash_sampling.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mashr.Rcheck/vign_test/mashr/vignettes/mash_sampling_files/figure-html/unnamed-chunk-5-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 42630 bytes
Input file size = 42768 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36393
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36393

Output IDAT size = 36393 bytes (6237 bytes decrease)
Output file size = 36471 bytes (6297 bytes = 14.72% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mashr.Rcheck/vign_test/mashr/vignettes/mash_sampling_files/figure-html/unnamed-chunk-6-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 41272 bytes
Input file size = 41410 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35941
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35941

Output IDAT size = 35941 bytes (5331 bytes decrease)
Output file size = 36019 bytes (5391 bytes = 13.02% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mashr.Rcheck/vign_test/mashr/vignettes/mash_sampling_files/figure-html/unnamed-chunk-7-1.png
672x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37686 bytes
Input file size = 37812 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 32971
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 32971

Output IDAT size = 32971 bytes (4715 bytes decrease)
Output file size = 33049 bytes (4763 bytes = 12.60% decrease)

--- finished re-building ‘mash_sampling.Rmd’

--- re-building ‘simulate_noncanon.Rmd’ using rmarkdown
--- finished re-building ‘simulate_noncanon.Rmd’

SUMMARY: processing the following file failed:
  ‘intro_mashbaselinemean.Rmd’

Error: Vignette re-building failed.
Execution halted