Running ‘t-browser.R’
  Comparing ‘t-browser.Rout’ to ‘t-browser.Rout.save’ ... OK
  Running ‘t-capture.R’
  Comparing ‘t-capture.Rout’ to ‘t-capture.Rout.save’ ... OK
  Running ‘t-change.R’
  Comparing ‘t-change.Rout’ to ‘t-change.Rout.save’ ... OK
  Running ‘t-demo.R’ [26s/40s]
  Comparing ‘t-demo.Rout’ to ‘t-demo.Rout.save’ ... OK
  Running ‘t-error.R’
  Comparing ‘t-error.Rout’ to ‘t-error.Rout.save’ ... OK
  Running ‘t-exec.R’
  Comparing ‘t-exec.Rout’ to ‘t-exec.Rout.save’ ... OK
  Running ‘t-get.R’
  Comparing ‘t-get.Rout’ to ‘t-get.Rout.save’ ... OK
  Running ‘t-global.R’
  Comparing ‘t-global.Rout’ to ‘t-global.Rout.save’ ... OK
  Running ‘t-handledruns.R’
  Comparing ‘t-handledruns.Rout’ to ‘t-handledruns.Rout.save’ ... OK
  Running ‘t-ischecks.R’
  Comparing ‘t-ischecks.Rout’ to ‘t-ischecks.Rout.save’ ... OK
  Running ‘t-item.R’
  Comparing ‘t-item.Rout’ to ‘t-item.Rout.save’ ... OK
  Running ‘t-list.R’
  Comparing ‘t-list.Rout’ to ‘t-list.Rout.save’ ... OK
  Running ‘t-misc.R’
  Comparing ‘t-misc.Rout’ to ‘t-misc.Rout.save’ ... OK
  Running ‘t-nav.R’ [6s/10s]
  Comparing ‘t-nav.Rout’ to ‘t-nav.Rout.save’ ... OK
  Running ‘t-parse.R’
  Comparing ‘t-parse.Rout’ to ‘t-parse.Rout.save’ ... OK
  Running ‘t-prompt.R’
  Comparing ‘t-prompt.Rout’ to ‘t-prompt.Rout.save’ ... OK
  Running ‘t-random.R’ [3s/10s]
  Comparing ‘t-random.Rout’ to ‘t-random.Rout.save’ ... OK
  Running ‘t-rename.R’
  Comparing ‘t-rename.Rout’ to ‘t-rename.Rout.save’ ... OK
  Running ‘t-repairenvs.R’
  Running ‘t-search.R’ [12s/37s]
  Comparing ‘t-search.Rout’ to ‘t-search.Rout.save’ ... OK
  Running ‘t-section.R’
  Comparing ‘t-section.Rout’ to ‘t-section.Rout.save’ ... OK
  Running ‘t-shim.R’ [10s/31s]
  Comparing ‘t-shim.Rout’ to ‘t-shim.Rout.save’ ... OK
  Running ‘t-state.R’
  Comparing ‘t-state.Rout’ to ‘t-state.Rout.save’ ... OK
  Running ‘t-text.R’
  Comparing ‘t-text.Rout’ to ‘t-text.Rout.save’ ... OK
  Running ‘t-translate.R’ [7s/22s]
  Comparing ‘t-translate.Rout’ to ‘t-translate.Rout.save’ ... OK
  Running ‘t-upgrade.R’ [8s/26s]
  Comparing ‘t-upgrade.Rout’ to ‘t-upgrade.Rout.save’ ... OK
  Running ‘t-utz1.R’ [57s/180s]
  Comparing ‘t-utz1.Rout’ to ‘t-utz1.Rout.save’ ... OK
  Running ‘t-utz2.R’ [29s/99s]
  Comparing ‘t-utz2.Rout’ to ‘t-utz2.Rout.save’ ... OK
  Running ‘zz-check.R’
Running the tests in ‘tests/t-repairenvs.R’ failed.
Complete output:
  > source(file.path("_helper", "init.R"))
  > 
  > exps <- expression(1 + 1, a <- 54, b <- 38, a + b, e <- 5 * a,
  +     a^2, f <- e * a, matrix(rep(f, 20)))
  > my.unitizer <- new("unitizer", id = 1, zero.env = new.env())
  > # add ref.exps as new items
  > coi(my.unitizer <- my.unitizer + exps)
  > my.unitizer2 <- new("unitizer", id = 2, zero.env = new.env())
  > # now convert them to reference items
  > coi(my.unitizer2 <- my.unitizer2 + my.unitizer@items.new)
  > # - "messed up env ancestry repair works" --------------------------------------
  > 
  > # Purposefully mess up the environments
  > parent.env(my.unitizer2@items.ref[[2]]@env) <- baseenv()
  > x <- unitizer:::healEnvs(my.unitizer2@items.ref, my.unitizer2)
  Error in parent.env(env) : the empty environment has no parent
  Error in run_ls(env = x@env, stop.env = base.env, all.names = TRUE, store.env = ref.env.store) : 
    Specified `stop.env` does not appear to be in parent environments.
  Warning in repairEnvs(items.final) :
    Detected corrupted environment history; we will attempt to repair, but keep in mind that even when repaired the test environments may be missleading.  For example, the objects other than `.new` or `.ref` when reviewing tests at the `unitzer` prompt may not be those you expect or those reported by `ls`.  To fully restore environments re-unitize with `unitize(..., force.update=TRUE)`.  If errors persist after an attempt to repair, please contact maintainer.
  Error in `parent.env<-`(`*tmp*`, value = prev.par) : 
    cycles in parent chains are not allowed
  > old.opt <- options(unitizer.max.env.depth = 20)
  > res <- unitizer:::healEnvs(my.unitizer2@items.ref, my.unitizer2)
  > is(res, "unitizerItems")
  [1] TRUE
  > ref.anc <- unitizer:::env_ancestry(x@base.env)
  Error in x@base.env : 
    no applicable method for `@` applied to an object of class "try-error"
  Execution halted
Running the tests in ‘tests/zz-check.R’ failed.
Complete output:
  > source('aammrtf/check.R')
  43: > lorem1 <- "Today, with Kiernan on the stand offering confirmation, Howard walked the jury through the enormous amount of data pulled from Ulbricht's computer. Defense lawyers haven't had a chance yet to respond to this evidence<e2><80><94>that will likely come tomorrow. The mountain they have to climb looks higher than ever, though. Last week, Ulbricht's lawyer outlined a defense in which Ulbricht walked away from the marketplace he created and was \"lured back.\" But what will explain the dozens of folders of data on this laptop, with data from the upper echelons of Silk Road management<e2><80><94>mixed with the most intimate details of Ulbricht's personal life?"
  
  
  
  
  
  
  
  
  
  
  
  
  
  Error: .Rout files missing (failed?):
  't-repairenvs.Rout'
  In addition: Warning message:
  In eval(ei, envir) : Some outputs contain non-ASCII:
  't-text.Rout'
  Execution halted