Running 'test-all.R' [327s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
  > ## Test `gratia` using the `testthat` package
  > 
  > ## Setup
  > library("testthat")
  > 
  > ## Runs the tests in tests/testthat
  > test_check("gratia")
  Loading required package: gratia
  Loading required package: nlme
  This is mgcv 1.9-1. For overview type 'help("mgcv-package")'.
  Loading required package: Matrix
  Loading required package: lme4
  
  Attaching package: 'lme4'
  
  The following object is masked from 'package:nlme':
  
      lmList
  
  This is gamm4 0.2-6
  
  This is scam 1.2-16.
  
  Attaching package: 'dplyr'
  
  The following object is masked from 'package:nlme':
  
      collapse
  
  The following object is masked from 'package:testthat':
  
      matches
  
  The following objects are masked from 'package:stats':
  
      filter, lag
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  
  Random effect smooths not currently supported.
  Ignoring: <s(fac)>
  
  [ FAIL 0 | WARN 0 | SKIP 172 | PASS 1764 ]
  
  ══ Skipped tests (172) ═════════════════════════════════════════════════════════
  • On CRAN (154): 'test-add-functions.R:72:5', 'test-bam-ar.R:14:5',
    'test-bam-ar.R:19:5', 'test-basis.R:21:5', 'test-basis.R:32:5',
    'test-by-variables.R:11:5', 'test-by-variables.R:60:5',
    'test-compare-smooths.R:30:5', 'test-concurvity.R:16:5',
    'test-concurvity.R:32:5', 'test-confint-methods.R:146:5',
    'test-data-sim.R:20:5', 'test-derivatives.R:374:5',
    'test-derivatives.R:416:5', 'test-derivatives.R:444:5',
    'test-diagnostic-plots.R:11:5', 'test-diagnostic-plots.R:17:5',
    'test-diagnostic-plots.R:42:5', 'test-diagnostic-plots.R:56:5',
    'test-diagnostic-plots.R:70:5', 'test-diagnostic-plots.R:84:5',
    'test-diagnostic-plots.R:98:5', 'test-diagnostic-plots.R:112:5',
    'test-difference-smooths.R:15:5', 'test-difference-smooths.R:25:5',
    'test-difference-smooths.R:34:5', 'test-difference-smooths.R:43:5',
    'test-difference-smooths.R:47:5', 'test-difference-smooths.R:58:5',
    'test-difference-smooths.R:70:5', 'test-difference-smooths.R:96:5',
    'test-draw-gam.R:12:5', 'test-draw-gam.R:17:5', 'test-draw-gam.R:23:5',
    'test-draw-gam.R:28:5', 'test-draw-gam.R:33:5', 'test-draw-gam.R:38:5',
    'test-draw-gam.R:43:5', 'test-draw-gam.R:50:5', 'test-draw-gam.R:55:5',
    'test-draw-gam.R:60:5', 'test-draw-gam.R:65:5', 'test-draw-gam.R:70:5',
    'test-draw-gam.R:75:5', 'test-draw-gam.R:80:5', 'test-draw-gam.R:85:5',
    'test-draw-gam.R:90:5', 'test-draw-gam.R:95:5', 'test-draw-gam.R:100:5',
    'test-draw-gam.R:106:5', 'test-draw-gam.R:112:5', 'test-draw-gam.R:118:5',
    'test-draw-gam.R:124:5', 'test-draw-gam.R:129:5', 'test-draw-gam.R:134:5',
    'test-draw-gam.R:141:5', 'test-draw-gam.R:148:5', 'test-draw-gam.R:188:5',
    'test-draw-methods.R:19:5', 'test-draw-methods.R:24:5',
    'test-draw-methods.R:46:5', 'test-draw-methods.R:54:5',
    'test-draw-methods.R:61:5', 'test-draw-methods.R:69:5',
    'test-draw-methods.R:98:5', 'test-draw-methods.R:123:5',
    'test-draw-methods.R:131:5', 'test-draw-methods.R:151:5',
    'test-draw-methods.R:163:5', 'test-draw-methods.R:168:5',
    'test-draw-methods.R:183:5', 'test-draw-methods.R:204:5',
    'test-draw-methods.R:225:5', 'test-draw-methods.R:258:5',
    'test-draw-methods.R:295:5', 'test-draw-methods.R:326:5',
    'test-draw-methods.R:332:5', 'test-draw-methods.R:340:5',
    'test-draw-methods.R:353:5', 'test-draw-methods.R:359:5',
    'test-draw-methods.R:364:5', 'test-draw-methods.R:373:5',
    'test-draw-methods.R:401:5', 'test-draw-methods.R:407:5',
    'test-draw-methods.R:424:5', 'test-draw-methods.R:458:5',
    'test-draw-methods.R:472:5', 'test-draw-methods.R:484:5',
    'test-draw-methods.R:488:5', 'test-draw-methods.R:516:5',
    'test-draw-methods.R:525:5', 'test-draw-methods.R:537:5',
    'test-draw-methods.R:550:5', 'test-draw-parametric-effects.R:12:5',
    'test-draw-parametric-effects.R:19:5', 'test-draw-parametric-effects.R:25:5',
    'test-draw-parametric-effects.R:31:5', 'test-draw-parametric-effects.R:38:5',
    'test-draw-smooth-estimates.R:11:5', 'test-draw-smooth-estimates.R:18:5',
    'test-draw-smooth-estimates.R:23:5', 'test-draw-smooth-estimates.R:28:5',
    'test-draw-smooth-estimates.R:35:5', 'test-draw-smooth-estimates.R:40:5',
    'test-draw-smooth-estimates.R:45:5', 'test-draw-smooth-estimates.R:50:5',
    'test-draw-smooth-estimates.R:68:5', 'test-evaluate-smooth-methods.R:15:5',
    'test-evaluate-smooth-methods.R:191:5', 'test-fderiv.R:11:5',
    'test-gjrm-methods.R:6:5', 'test-hgam-paper.R:39:5',
    'test-hgam-paper.R:53:5', 'test-hgam-paper.R:71:5', 'test-hgam-paper.R:86:5',
    'test-hgam-paper.R:100:5', 'test-hgam-paper.R:116:5',
    'test-hgam-paper.R:129:5', 'test-hgam-paper.R:144:5',
    'test-hgam-paper.R:160:5', 'test-hgam-paper.R:175:5',
    'test-hgam-paper.R:189:5', 'test-hgam-paper.R:207:5',
    'test-lp-matrix.R:25:5', 'test-overview.R:26:5', 'test-overview.R:32:5',
    'test-overview.R:38:5', 'test-posterior-samples.R:177:5',
    'test-posterior-samples.R:184:5', 'test-qq-plot.R:32:5',
    'test-qq-plot.R:39:5', 'test-qq-plot.R:46:5', 'test-qq-plot.R:51:5',
    'test-qq-plot.R:56:5', 'test-qq-plot.R:61:5', 'test-qq-plot.R:67:5',
    'test-qq-plot.R:73:5', 'test-qq-plot.R:79:5', 'test-rootograms.R:9:5',
    'test-rootograms.R:16:5', 'test-rootograms.R:20:5', 'test-rootograms.R:26:5',
    'test-simulate-methods.R:76:5', 'test-smooth-coefs.R:52:5',
    'test-utilities.R:340:5', 'test-worm-plot.R:32:5', 'test-worm-plot.R:37:5',
    'test-worm-plot.R:42:5', 'test-worm-plot.R:47:5', 'test-worm-plot.R:52:5',
    'test-worm-plot.R:57:5', 'test-worm-plot.R:62:5', 'test-worm-plot.R:67:5',
    'test-worm-plot.R:72:5'
  • On Windows (18): 'test-draw-gam.R:152:5', 'test-draw-gam.R:159:5',
    'test-draw-methods.R:84:5', 'test-draw-methods.R:103:5',
    'test-draw-methods.R:114:5', 'test-draw-methods.R:139:5',
    'test-draw-methods.R:448:5', 'test-draw-methods.R:498:5',
    'test-draw-smooth-estimates.R:55:5', 'test-draw-smooth-estimates.R:61:5',
    'test-draw-smooth-estimates.R:72:5', 'test-draw-smooth-estimates.R:80:5',
    'test-draw-smooth-estimates.R:88:5', 'test-draw-smooth-estimates.R:96:5',
    'test-draw-smooth-estimates.R:104:5', 'test-draw-smooth-estimates.R:112:5',
    'test-draw-smooth-estimates.R:120:5', 'test-draw-smooth-estimates.R:129:5'
  
  [ FAIL 0 | WARN 0 | SKIP 172 | PASS 1764 ]
  Deleting unused snapshots:
  • basis/draw-basis-works-with-a-gam-single-smooth.svg
  • basis/draw-basis-works-with-a-scam-single-smooth.svg
  • compare-smooths/compare-smooths-bottom-legened.svg
  • compare-smooths/compare-smooths-set-nrow-ncol.svg
  • derivatives/draw-issue-47-derivatives-for-complex-factor-by.svg
  • derivatives/draw-issue-47-derivatives-for-factor-by.svg
  • derivatives/draw-issue-47-derivatives-for-gamm-factor-by.svg
  • derivatives/draw-issue-47-derivs-for-ordered-factor-by.svg
  • diagnostic-plots/qq-plot-glm-normal.svg
  • diagnostic-plots/qq-plot-glm-simulate.svg
  • diagnostic-plots/qq-plot-lm-normal.svg
  • diagnostic-plots/qq-plot-lm-simulate.svg
  • diagnostic-plots/worm-plot-gam-normal.svg
  • diagnostic-plots/worm-plot-gam-simulate.svg
  • diagnostic-plots/worm-plot-glm-normal.svg
  • diagnostic-plots/worm-plot-glm-simulate.svg
  • diagnostic-plots/worm-plot-lm-normal.svg
  • diagnostic-plots/worm-plot-lm-simulate.svg
  • difference-smooths/draw-difference-smooths-bam.svg
  • difference-smooths/draw-difference-smooths-bivariate-gam-contours.svg
  • difference-smooths/draw-difference-smooths-bivariate-gam.svg
  • difference-smooths/draw-difference-smooths-gamm.svg
  • difference-smooths/draw-difference-smooths-gamm4.svg
  • draw-gam/draw-gam-m-gamm4.svg
  • draw-gam/draw-gam-parametric-only-model-rotated-labels.svg
  • draw-gam/draw-gam-quadvar-te.svg
  • draw-gam/draw-gam-trivar-te.svg
  • draw-methods/draw-2d-smooth-diff-contour-colour.svg
  • draw-methods/draw-2d-smooth-with-20-contour-bins.svg
  • draw-methods/draw-2d-smooth-with-5-contour-bins.svg
  • draw-methods/draw-2d-smooth-with-spectral-palette.svg
  • draw-methods/draw-2d-smooth.svg
  • draw-methods/draw-am-with-2d-smooth.svg
  • draw-methods/draw-basic-tprs-basis-rotated.svg
  • draw-methods/draw-derivatives-for-a-gam-rotated-labels.svg
  • draw-methods/draw-derivatives-for-a-gam-with-fixed-scales-rotated.svg
  • draw-methods/draw-derivatives-for-a-gam-with-fixed-scales.svg
  • draw-methods/draw-distributed-lag-model-issue-116.svg
  • draw-methods/draw-evaulated-2d-smooth-standard-errors.svg
  • draw-methods/draw-factor-by-variable-smooth-with-fixed-scales.svg
  • draw-methods/draw-fs-smooth-with-discrete-plasma-palette.svg
  • draw-methods/draw-gam-model-with-fs-smooth.svg
  • draw-methods/draw-gam-model-with-ranef-smooth-factor-by.svg
  • draw-methods/draw-gam-model-with-ranef-smooth.svg
  • draw-methods/draw-gam-smooth-for-two-selected-smooths-character.svg
  • draw-methods/draw-gam-smooth-for-two-selected-smooths-logical.svg
  • draw-methods/draw-gam-smooth-for-two-selected-smooths-numeric.svg
  • draw-methods/draw-gam-with-factor-parametric-term.svg
  • draw-methods/draw-gam-with-linear-parametric-term.svg
  • draw-methods/draw-gam-with-select-and-parametric-is-false.svg
  • draw-methods/draw-gam-with-select-and-parametric-is-true.svg
  • draw-methods/draw-gam-without-select-and-parametric-is-false.svg
  • draw-methods/draw-gam-without-select-and-parametric-is-true.svg
  • draw-methods/draw-model-with-fs-smooth-fixed-scales.svg
  • draw-methods/draw-model-with-ranef-smooth-fixed-scales.svg
  • draw-methods/draw-penalty-df-issue-95-label-order.svg
  • draw-methods/draw-penalty-df-with-single-smooths-normalized.svg
  • draw-methods/draw-penalty-df-with-single-smooths.svg
  • draw-methods/draw-penalty-single-smooths-user-continous-fill.svg
  • draw-methods/draw-selected-factor-by-smooth-samples-for-gam-m3.svg
  • draw-methods/draw-selected-smooth-with-overall-uncertainty-false.svg
  • draw-methods/draw-simple-multi-smooth-am-with-fixed-scales.svg
  • draw-methods/draw-simple-partial-residuals-with-fixed-scales.svg
  • draw-methods/draw-smooth-samples-for-bivariate-gam-contours.svg
  • draw-methods/draw-smooth-samples-for-gam-m1-rotated.svg
  • draw-methods/draw-smooth-samples-for-gam-m2-rotated.svg
  • draw-methods/draw-smooth-samples-for-gam-m2.svg
  • draw-methods/draw-smooth-samples-for-gam-m3-fixed-scales-rotated.svg
  • draw-methods/draw-smooth-samples-for-gam-m3-fixed-scales.svg
  • draw-methods/draw-smooth-samples-for-gam-m3-rotated.svg
  • draw-methods/draw-smooth-samples-for-gam-m3.svg
  • draw-methods/draw-smooth-samples-for-gam-n-samples.svg
  • draw-methods/draw-smooth-samples-for-m2-n-samples.svg
  • draw-methods/draw-std-error-of-2d-smooth.svg
  • draw-methods/draw-with-ranef-smooth-factor-by-fixed-scales.svg
  • draw-methods/issue-73-draw-uses-fixed-scales-if-asked-for-them.svg
  • draw-smooth-estimates/draw-smooth-estimates-m-1-smooth.svg
  • draw-smooth-estimates/draw-smooth-estimates-m-gamm4.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-bivar-te.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-bivar.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-quadvar-t2.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-quadvar-te.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-quadvar.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-trivar-t2.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-trivar-te.svg
  • draw-smooth-estimates/draw-smooth-estimates-su-m-trivar.svg
  • draw-smooth-estimates/draw-smooth-estimates-sz-factor-smooth.svg
  • draw-smooth-estimates/draw-smooth-estimates-sz-two-factor-smooth.svg
  • gjrm-methods/draw-simple-gjrm-gamlss.svg
  • gjrm/draw-gamlss.svg
  • hgam-paper/hgam-paper-bird-move-model-1.svg
  • hgam-paper/hgam-paper-bird-move-model-2.svg
  • hgam-paper/hgam-paper-bird-move-model-3.svg
  • hgam-paper/hgam-paper-bird-move-model-4.svg
  • hgam-paper/hgam-paper-bird-move-model-5.svg
  • hgam-paper/hgam-paper-co2-model-1.svg
  • hgam-paper/hgam-paper-co2-model-2.svg
  • hgam-paper/hgam-paper-co2-model-3.svg
  • hgam-paper/hgam-paper-co2-model-4.svg
  • hgam-paper/hgam-paper-co2-model-5.svg
  • hgam-paper/hgam-paper-zoop-model-4.svg
  • hgam-paper/hgam-paper-zoop-model-5.svg
  • rootograms/draw-gaussian-rootogram.svg
  • rootograms/draw-neg-bin-rootogram.svg
  > 
  > proc.time()
     user  system elapsed 
   161.76    7.68  169.60