Running 'testthat.R' [113s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(IncidencePrevalence)
  > 
  > test_check("IncidencePrevalence")
  Starting 2 test processes
  [ FAIL 18 | WARN 0 | SKIP 72 | PASS 122 ]
  
  ══ Skipped tests (72) ══════════════════════════════════════════════════════════
  • On CRAN (72): 'test-benchmarkIncidencePrevalence.R:2:3',
    'test-benchmarkIncidencePrevalence.R:33:3',
    'test-estimatePrevalence.R:153:3', 'test-estimatePrevalence.R:210:3',
    'test-estimatePrevalence.R:316:3', 'test-estimatePrevalence.R:446:3',
    'test-estimatePrevalence.R:523:3', 'test-estimatePrevalence.R:642:3',
    'test-estimatePrevalence.R:688:3', 'test-estimatePrevalence.R:743:3',
    'test-estimatePrevalence.R:792:3', 'test-estimatePrevalence.R:816:3',
    'test-estimatePrevalence.R:841:3', 'test-estimatePrevalence.R:959:3',
    'test-estimatePrevalence.R:991:3', 'test-estimatePrevalence.R:1024:3',
    'test-estimatePrevalence.R:1101:3', 'test-estimatePrevalence.R:1158:3',
    'test-estimatePrevalence.R:1223:3', 'test-estimatePrevalence.R:1293:3',
    'test-estimateIncidence.R:164:3', 'test-estimateIncidence.R:259:3',
    'test-estimateIncidence.R:330:3', 'test-estimateIncidence.R:417:3',
    'test-estimateIncidence.R:509:3', 'test-estimateIncidence.R:591:3',
    'test-estimateIncidence.R:745:3', 'test-estimateIncidence.R:850:3',
    'test-estimateIncidence.R:995:3', 'test-estimateIncidence.R:1056:3',
    'test-estimateIncidence.R:1111:3', 'test-estimateIncidence.R:1194:3',
    'test-estimateIncidence.R:1294:3', 'test-estimateIncidence.R:1400:3',
    'test-estimateIncidence.R:1477:3', 'test-estimateIncidence.R:1582:3',
    'test-estimateIncidence.R:1688:3', 'test-estimateIncidence.R:1794:3',
    'test-estimateIncidence.R:1850:3', 'test-estimateIncidence.R:2031:3',
    'test-estimateIncidence.R:2279:3', 'test-estimateIncidence.R:2357:3',
    'test-estimateIncidence.R:2743:3', 'test-estimateIncidence.R:2774:3',
    'test-estimateIncidence.R:2821:3', 'test-estimateIncidence.R:2877:3',
    'test-estimateIncidence.R:2936:3', 'test-estimateIncidence.R:2991:3',
    'test-generateDenominatorCohortSet.R:138:3',
    'test-generateDenominatorCohortSet.R:185:3',
    'test-generateDenominatorCohortSet.R:289:3',
    'test-generateDenominatorCohortSet.R:325:3',
    'test-generateDenominatorCohortSet.R:582:3',
    'test-generateDenominatorCohortSet.R:629:3',
    'test-generateDenominatorCohortSet.R:708:3',
    'test-generateDenominatorCohortSet.R:800:3',
    'test-generateDenominatorCohortSet.R:843:3',
    'test-generateDenominatorCohortSet.R:895:3',
    'test-generateDenominatorCohortSet.R:979:3',
    'test-generateDenominatorCohortSet.R:1102:3',
    'test-generateDenominatorCohortSet.R:1166:3',
    'test-generateDenominatorCohortSet.R:1219:3',
    'test-generateDenominatorCohortSet.R:1277:3',
    'test-generateDenominatorCohortSet.R:1353:3',
    'test-generateDenominatorCohortSet.R:1474:3',
    'test-generateDenominatorCohortSet.R:1573:3',
    'test-generateDenominatorCohortSet.R:1624:3',
    'test-mockIncidencePrevalenceRef.R:38:3',
    'test-mockIncidencePrevalenceRef.R:71:3',
    'test-mockIncidencePrevalenceRef.R:99:3',
    'test-mockIncidencePrevalenceRef.R:150:3',
    'test-mockIncidencePrevalenceRef.R:248:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-bindEstimates.R:15:3'): check with mock db ─────────────────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-bindEstimates.R:15:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimatePrevalence.R:3:3'): mock db: check output format ───────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─mockIncidencePrevalenceRef() %>% ... at test-estimatePrevalence.R:3:3
    2. ├─IncidencePrevalence::generateDenominatorCohortSet(., name = "denominator")
    3. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    4. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    5. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    6. │       └─studyPopDb %>% ...
    7. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    8. ├─omopgenerics:::compute.cdm_table(...)
    9. │ ├─dplyr::compute(...)
   10. │ └─CDMConnector:::compute.db_cdm(...)
   11. │   └─CDMConnector:::.computeQuery(...)
   12. │     └─dbplyr::sql_render(x)
   13. │       ├─dbplyr::sql_render(...)
   14. │       └─dbplyr:::sql_render.tbl_lazy(...)
   15. │         ├─dbplyr::sql_render(...)
   16. │         └─dbplyr:::sql_render.lazy_query(...)
   17. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   18. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   19. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   20. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   21. │               └─dbplyr:::get_select_sql(...)
   22. │                 └─dbplyr:::translate_select_sql(con, select)
   23. │                   └─dbplyr::translate_sql_(...)
   24. │                     └─base::lapply(...)
   25. │                       └─dbplyr (local) FUN(X[[i]], ...)
   26. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   27. │                         └─rlang::eval_tidy(x, mask)
   28. └─CDMConnector::dateadd
   29.   └─cli::cli_abort(...)
   30.     └─rlang::abort(...)
  ── Error ('test-estimatePrevalence.R:138:3'): mock db: checks on working example ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimatePrevalence.R:138:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimatePrevalence.R:1269:3'): mock db: if missing cohort attributes ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimatePrevalence.R:1269:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimatePrevalence.R:1315:3'): mock db: prevalence using strata vars ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimatePrevalence.R:1315:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimateIncidence.R:5:3'): mock db: check output format ────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimateIncidence.R:5:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimateIncidence.R:135:3'): mock db: checks on working example ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimateIncidence.R:135:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimateIncidence.R:3038:3'): mock db: if missing cohort attributes ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimateIncidence.R:3038:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimateIncidence.R:3053:3'): mock db: empty outcome cohort ────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimateIncidence.R:3053:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-estimateIncidence.R:3078:3'): mock db: incidence using strata vars ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-estimateIncidence.R:3078:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-exportIncidencePrevalenceResults.R:3:3'): writing results ──────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-exportIncidencePrevalenceResults.R:3:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-exportIncidencePrevalenceResults.R:26:3'): writing results- expected errors ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-exportIncidencePrevalenceResults.R:26:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-generateDenominatorCohortSet.R:4:3'): mock db: check output format ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-generateDenominatorCohortSet.R:4:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-generateDenominatorCohortSet.R:75:3'): mock db: checks on working example ──
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-generateDenominatorCohortSet.R:75:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-plotting.R:3:3'): basic incidence plot ─────────────────────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-plotting.R:3:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-plotting.R:36:3'): basic prevalence plot ───────────────────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-plotting.R:36:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-plotting.R:73:3'): plot facets ─────────────────────────────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-plotting.R:73:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  ── Error ('test-plotting.R:118:3'): plot colour ────────────────────────────────
  Error in `CDMConnector::dateadd()`: No known SQL translation
  Backtrace:
       ▆
    1. ├─IncidencePrevalence::generateDenominatorCohortSet(...) at test-plotting.R:118:3
    2. │ └─IncidencePrevalence:::fetchDenominatorCohortSet(...)
    3. │   └─IncidencePrevalence:::fetchSingleTargetDenominatorCohortSet(...)
    4. │     └─IncidencePrevalence:::getDenominatorCohorts(...)
    5. │       └─studyPopDb %>% ...
    6. ├─dplyr::compute(., name = paste0(intermediateTable, "_i_4"), temporary = FALSE)
    7. ├─omopgenerics:::compute.cdm_table(...)
    8. │ ├─dplyr::compute(...)
    9. │ └─CDMConnector:::compute.db_cdm(...)
   10. │   └─CDMConnector:::.computeQuery(...)
   11. │     └─dbplyr::sql_render(x)
   12. │       ├─dbplyr::sql_render(...)
   13. │       └─dbplyr:::sql_render.tbl_lazy(...)
   14. │         ├─dbplyr::sql_render(...)
   15. │         └─dbplyr:::sql_render.lazy_query(...)
   16. │           ├─dbplyr::sql_build(query, con = con, sql_options = sql_options)
   17. │           └─dbplyr:::sql_build.lazy_select_query(query, con = con, sql_options = sql_options)
   18. │             ├─dbplyr::sql_build(op$x, con, sql_options = sql_options)
   19. │             └─dbplyr:::sql_build.lazy_select_query(op$x, con, sql_options = sql_options)
   20. │               └─dbplyr:::get_select_sql(...)
   21. │                 └─dbplyr:::translate_select_sql(con, select)
   22. │                   └─dbplyr::translate_sql_(...)
   23. │                     └─base::lapply(...)
   24. │                       └─dbplyr (local) FUN(X[[i]], ...)
   25. │                         ├─dbplyr::escape(eval_tidy(x, mask), con = con)
   26. │                         └─rlang::eval_tidy(x, mask)
   27. └─CDMConnector::dateadd
   28.   └─cli::cli_abort(...)
   29.     └─rlang::abort(...)
  
  [ FAIL 18 | WARN 0 | SKIP 72 | PASS 122 ]
  Error: Test failures
  Execution halted