checkRd: (-1) beast.Rd:155: Lost braces; missing escapes or markup?
   155 | 		 \item \code{cp}: [Changepoints] a vector of length \code{tcp.max=tcp.minmax[2]}; the most possible changepoint locations in the trend component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {tseg.min} and then picking up to a total \code{prior$MaxKnotNum}/\code{tcp.max} of the highest peaks in the filtered curve.  NaNs are possible if no enough changepoints are identified. \code{cp} records all the possible changepoints identified and many of them are bound to be false positives. Do not blindly treat all of them as actual changepoints.
       |                                                                                                                                                                                                                                                                                         ^
checkRd: (-1) beast.Rd:165: Lost braces; missing escapes or markup?
   165 | 		 \item \code{slpSgnPosPr}: [PRobability of slope having a positive sign] a vector of length N;  the probability of the slope being positive (i.e., increasing trend) for the trend component. For example, if {slpSgnPosPr=0.80} at a given point in time, it means that 80\% of the individual trend models sampled in the MCMC chain has a positive slope at that point.
       |                                                                                                                                                                                                                               ^
checkRd: (-1) beast.Rd:166: Lost braces; missing escapes or markup?
   166 | 		 \item \code{slpSgnZeroPr}: [PRobability of slope being zero] a vector of length N;  the probability of the slope being zero (i.e., a flat constant line) for the trend component. For example, if {slpSgnZeroPr=0.10} at a given point in time, it means that 10\% of the individual trend models sampled in the MCMC chain has a zero slope at that point.  The probability of slope being negative can be obtained from \code{1}-\code{slpSgnZeroPr}-\code{slpSgnPosPr}.
       |                                                                                                                                                                                                                    ^
checkRd: (-1) beast.Rd:210: Lost braces; missing escapes or markup?
   210 | 		 \item \code{cp}: [Changepoints] a vector of length \code{scp.max=scp.minmax[2]}; the most possible  changepoint locations in the seasonal component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {sseg.min} and then picking up to a total \code{ncp} of the highest peaks in the filtered curve. If \code{ncp<scp.max}, the remaining of the vector is filled with NaNs.
       |                                                                                                                                                                                                                                                                                             ^
checkRd: (-1) beast.irreg.Rd:173: Lost braces; missing escapes or markup?
   173 | 		 \item \code{cp}: [Changepoints] a vector of length \code{tcp.max=tcp.minmax[2]}; the most possible changepoint locations in the trend component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {tseg.min} and then picking up to a total \code{prior$MaxKnotNum}/\code{tcp.max} of the highest peaks in the filtered curve.  NaNs are possible if no enough changepoints are identified. \code{cp} records all the possible changepoints identified and many of them are bound to be false positives. Do not blindly treat all of them as actual changepoints.
       |                                                                                                                                                                                                                                                                                         ^
checkRd: (-1) beast.irreg.Rd:183: Lost braces; missing escapes or markup?
   183 | 		 \item \code{slpSgnPosPr}: [PRobability of slope having a positive sign] a vector of length N;  the probability of the slope being positive (i.e., increasing trend) for the trend component. For example, if {slpSgnPosPr=0.80} at a given point in time, it means that 80\% of the individual trend models sampled in the MCMC chain has a positive slope at that point.
       |                                                                                                                                                                                                                               ^
checkRd: (-1) beast.irreg.Rd:184: Lost braces; missing escapes or markup?
   184 | 		 \item \code{slpSgnZeroPr}: [PRobability of slope being zero] a vector of length N;  the probability of the slope being zero (i.e., a flat constant line) for the trend component. For example, if {slpSgnZeroPr=0.10} at a given point in time, it means that 10\% of the individual trend models sampled in the MCMC chain has a zero slope at that point.  The probability of slope being negative can be obtained from \code{1}-\code{slpSgnZeroPr}-\code{slpSgnPosPr}.
       |                                                                                                                                                                                                                    ^
checkRd: (-1) beast.irreg.Rd:228: Lost braces; missing escapes or markup?
   228 | 		 \item \code{cp}: [Changepoints] a vector of length \code{scp.max=scp.minmax[2]}; the most possible  changepoint locations in the seasonal component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {sseg.min} and then picking up to a total \code{ncp} of the highest peaks in the filtered curve. If \code{ncp<scp.max}, the remaining of the vector is filled with NaNs.
       |                                                                                                                                                                                                                                                                                             ^
checkRd: (-1) beast123.Rd:216: Lost braces; missing escapes or markup?
   216 | 		 \item \code{cp}: [Changepoints] a vector of length \code{tcp.max=tcp.minmax[2]}; the most possible changepoint locations in the trend component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {tseg.min} and then picking up to a total \code{prior$MaxKnotNum}/\code{tcp.max} of the highest peaks in the filtered curve.  NaNs are possible if no enough changepoints are identified. \code{cp} records all the possible changepoints identified and many of them are bound to be false positives. Do not blindly treat all of them as actual changepoints.
       |                                                                                                                                                                                                                                                                                         ^
checkRd: (-1) beast123.Rd:226: Lost braces; missing escapes or markup?
   226 | 		 \item \code{slpSgnPosPr}: [PRobability of slope having a positive sign] a vector of length N;  the probability of the slope being positive (i.e., increasing trend) for the trend component. For example, if {slpSgnPosPr=0.80} at a given point in time, it means that 80\% of the individual trend models sampled in the MCMC chain has a positive slope at that point.
       |                                                                                                                                                                                                                               ^
checkRd: (-1) beast123.Rd:227: Lost braces; missing escapes or markup?
   227 | 		 \item \code{slpSgnZeroPr}: [PRobability of slope being zero] a vector of length N;  the probability of the slope being zero (i.e., a flat constant line) for the trend component. For example, if {slpSgnZeroPr=0.10} at a given point in time, it means that 10\% of the individual trend models sampled in the MCMC chain has a zero slope at that point.  The probability of slope being negative can be obtained from \code{1}-\code{slpSgnZeroPr}-\code{slpSgnPosPr}.
       |                                                                                                                                                                                                                    ^
checkRd: (-1) beast123.Rd:271: Lost braces; missing escapes or markup?
   271 | 		 \item \code{cp}: [Changepoints] a vector of length \code{metadata$seasonMaxKnotNum}; the most possible  changepoint locations in the seasonal component. The locations are obtained by first applying a sum-filtering to the \code{cpOccPr} curve with a filter window size of {prior$trendMinSeptDist} and then picking up to a total \code{ncp} of the highest peaks in the filtered curve. If \code{ncp<seasonMaxKnotNum}, the remaining of the vector is filled with NaNs.
       |                                                                                                                                                                                                                                                                                                 ^