Running 'testthat.R' [30s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > test_check("Cyclops")
  Loading required package: Cyclops
  Sorting outcomes by stratumId and rowId
  Sorting covariates by covariateId, stratumId, and rowId
  Sorting outcomes by stratumId and rowId
  Sorting covariates by covariateId, stratumId, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sparseness = 75.675 %
  Sparseness = 98.96 %
  Sorting covariates by covariateId and rowId
  Sorting covariates by covariateId and rowId
  Sorting covariates by covariateId and rowId
  Sparseness = 98.96 %
  Sorting outcomes by rowId
  Sorting covariates by covariateId and rowId
  Sparseness = 76.15 %
  Sorting covariates by covariateId and rowId
  Sparseness = 75.68 %
  Sorting covariates by covariateId and rowId
  Sparseness = 76.3 %
  Sorting covariates by covariateId and rowId
  Sparseness = 76.05 %
  Sorting covariates by covariateId and rowId
  Sparseness = 76.4 %
  Sorting covariates by covariateId and rowId
  Analysis took 0.0446 secs ( 0.000143  )
  Fitting model using clogit
  Analysis took 0.323 secs
  Sparseness = 76.4 %
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Analysis took 0.0289 secs ( 0.000441  )
  Fitting model using coxpht
  Analysis took 0.0185 secs
  Using prior: None
  
  log post: -153.591 (-153.591 + 0) (iter:1, conv: 0.987315) 
  
  log post: -140.356 (-140.356 + 0) (iter:2, conv: 0.418345) 
  
  log post: -132.023 (-132.023 + 0) (iter:3, conv: 0.261265) 
  
  log post: -126.384 (-126.384 + 0) (iter:4, conv: 0.18403) 
  
  log post: -122.381 (-122.381 + 0) (iter:5, conv: 0.13696) 
  
  log post: -119.443 (-119.443 + 0) (iter:6, conv: 0.106924) 
  
  log post: -117.232 (-117.232 + 0) (iter:7, conv: 0.086332) 
  
  log post: -115.533 (-115.533 + 0) (iter:8, conv: 0.0714192) 
  
  log post: -114.208 (-114.208 + 0) (iter:9, conv: 0.0601726) 
  
  log post: -113.161 (-113.161 + 0) (iter:10, conv: 0.0514226) 
  
  log post: -112.324 (-112.324 + 0) (iter:11, conv: 0.0444455) 
  
  log post: -111.651 (-111.651 + 0) (iter:12, conv: 0.0387701) 
  
  log post: -111.103 (-111.103 + 0) (iter:13, conv: 0.0340776) 
  
  log post: -110.656 (-110.656 + 0) (iter:14, conv: 0.0301443) 
  
  log post: -110.289 (-110.289 + 0) (iter:15, conv: 0.0268092) 
  
  log post: -109.985 (-109.985 + 0) (iter:16, conv: 0.0239533) 
  
  log post: -109.734 (-109.734 + 0) (iter:17, conv: 0.0214871) 
  
  log post: -109.524 (-109.524 + 0) (iter:18, conv: 0.0193415) 
  
  log post: -109.349 (-109.349 + 0) (iter:19, conv: 0.017463) 
  
  log post: -109.203 (-109.203 + 0) (iter:20, conv: 0.015809) 
  
  log post: -109.08 (-109.08 + 0) (iter:21, conv: 0.0143454) 
  
  log post: -108.976 (-108.976 + 0) (iter:22, conv: 0.0130446) 
  
  log post: -108.889 (-108.889 + 0) (iter:23, conv: 0.011884) 
  
  log post: -108.815 (-108.815 + 0) (iter:24, conv: 0.0108446) 
  
  log post: -108.753 (-108.753 + 0) (iter:25, conv: 0.00991073) 
  
  log post: -108.7 (-108.7 + 0) (iter:26, conv: 0.00906605) 
  
  log post: -108.655 (-108.655 + 0) (iter:27, conv: 0.00830381) 
  
  log post: -108.616 (-108.616 + 0) (iter:28, conv: 0.00761432) 
  
  log post: -108.584 (-108.584 + 0) (iter:29, conv: 0.0069893) 
  
  log post: -108.556 (-108.556 + 0) (iter:30, conv: 0.0064216) 
  
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  log post: -108.512 (-108.512 + 0) (iter:32, conv: 0.00543428) 
  
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  log post: -108.481 (-108.481 + 0) (iter:34, conv: 0.00461189) 
  
  log post: -108.468 (-108.468 + 0) (iter:35, conv: 0.00425252) 
  
  log post: -108.457 (-108.457 + 0) (iter:36, conv: 0.00392329) 
  
  log post: -108.448 (-108.448 + 0) (iter:37, conv: 0.00362136) 
  
  log post: -108.44 (-108.44 + 0) (iter:38, conv: 0.0033442) 
  
  log post: -108.433 (-108.433 + 0) (iter:39, conv: 0.00308955) 
  
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  log post: -108.422 (-108.422 + 0) (iter:41, conv: 0.00263994) 
  
  log post: -108.418 (-108.418 + 0) (iter:42, conv: 0.00244154) 
  
  log post: -108.415 (-108.415 + 0) (iter:43, conv: 0.00225873) 
  
  log post: -108.411 (-108.411 + 0) (iter:44, conv: 0.0020902) 
  
  log post: -108.409 (-108.409 + 0) (iter:45, conv: 0.00193474) 
  
  log post: -108.406 (-108.406 + 0) (iter:46, conv: 0.00179126) 
  
  log post: -108.404 (-108.404 + 0) (iter:47, conv: 0.00165879) 
  
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  log post: -108.401 (-108.401 + 0) (iter:49, conv: 0.00142337) 
  
  log post: -108.4 (-108.4 + 0) (iter:50, conv: 0.00131885) 
  
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  log post: -108.397 (-108.397 + 0) (iter:53, conv: 0.00105009) 
  
  log post: -108.396 (-108.396 + 0) (iter:54, conv: 0.000973536) 
  
  log post: -108.396 (-108.396 + 0) (iter:55, conv: 0.000902672) 
  
  log post: -108.395 (-108.395 + 0) (iter:56, conv: 0.000837057) 
  
  log post: -108.395 (-108.395 + 0) (iter:57, conv: 0.00077629) 
  
  log post: -108.394 (-108.394 + 0) (iter:58, conv: 0.000720002) 
  
  log post: -108.394 (-108.394 + 0) (iter:59, conv: 0.000667853) 
  
  log post: -108.394 (-108.394 + 0) (iter:60, conv: 0.00061953) 
  
  log post: -108.393 (-108.393 + 0) (iter:61, conv: 0.000574747) 
  
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  log post: -108.393 (-108.393 + 0) (iter:63, conv: 0.000494758) 
  
  log post: -108.393 (-108.393 + 0) (iter:64, conv: 0.000459082) 
  
  log post: -108.393 (-108.393 + 0) (iter:65, conv: 0.000426002) 
  
  log post: -108.393 (-108.393 + 0) (iter:66, conv: 0.000395326) 
  
  log post: -108.393 (-108.393 + 0) (iter:67, conv: 0.000366876) 
  
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  log post: -108.392 (-108.392 + 0) (iter:85, conv: 9.61414e-05) 
  
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  log post: -108.392 (-108.392 + 0) (iter:87, conv: 8.28789e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:88, conv: 7.69515e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:89, conv: 7.14487e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:90, conv: 6.634e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:91, conv: 6.1597e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:92, conv: 5.71936e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:93, conv: 5.31053e-05) 
  
  log post: -108.392 (-108.392 + 0) (iter:94, conv: 4.93095e-05) 
  
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  log post: -108.392 (-108.392 + 0) (iter:129, conv: 3.68562e-06) 
  
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  log post: -108.392 (-108.392 + 0) (iter:133, conv: 2.74042e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:134, conv: 2.54474e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:135, conv: 2.36304e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:136, conv: 2.19431e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:137, conv: 2.03763e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:138, conv: 1.89214e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:139, conv: 1.75703e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:140, conv: 1.63158e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:141, conv: 1.51508e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:142, conv: 1.4069e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:143, conv: 1.30644e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:144, conv: 1.21316e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:145, conv: 1.12654e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:146, conv: 1.0461e-06) 
  
  log post: -108.392 (-108.392 + 0) (iter:147, conv: 9.71411e-07) Reached convergence criterion
  Using prior: Laplace(1.41421) None 
  
  KKT Swindle count 1, activeSet size =  1
  update time: 0.0001006 in 3 iterations.
  Inactive set violations: 1
  
  KKT Swindle count 2, activeSet size =  2
  update time: 0.0060714 in 134 iterations.
  Sparseness = 99.012 %
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Generating censoring weights
  Generating censoring weights
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Using cross-validation selector type byRow
  Performing 10-fold cross-validation [seed = 1698469494] with data partitions of sizes 1 1 1 1 1 1 1 1 1 0
  Using 1 thread(s)
  Starting var = 0.333333 (default)
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #1 Rep #1 pred log like = 106.597
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #2 Rep #1 pred log like = 14.674
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #3 Rep #1 pred log like = 44.5695
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #4 Rep #1 pred log like = 59.491
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #5 Rep #1 pred log like = 20.3427
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #6 Rep #1 pred log like = 24.9456
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #7 Rep #1 pred log like = 79.8291
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #8 Rep #1 pred log like = 112.869
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #9 Rep #1 pred log like = 33.6249
  Running at Laplace(2.44949) None  Grid-point #1 at 0.333333 	Fold #10 Rep #1 pred log like = 0
  AvgPred = 49.6943 with stdev = 36.9967
  Completed at 0.333333
  Next point at 3.33333 with value 0 and continue = 1
  search[ 0.333333 ] = 49.6943(36.9967)
  
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #1 Rep #1 pred log like = 106.149
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #2 Rep #1 pred log like = 14.5878
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #3 Rep #1 pred log like = 44.6336
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #4 Rep #1 pred log like = 57.3394
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #5 Rep #1 pred log like = 20.3443
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #6 Rep #1 pred log like = 24.7928
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #7 Rep #1 pred log like = 79.7968
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #8 Rep #1 pred log like = 110.219
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #9 Rep #1 pred log like = 32.889
  Running at Laplace(0.774597) None  Grid-point #2 at 3.33333 	Fold #10 Rep #1 pred log like = 0
  AvgPred = 49.0752 with stdev = 36.4729
  Completed at 3.33333
  Next point at 0.0333333 with value 0 and continue = 1
  search[ 0.333333 ] = 49.6943(36.9967)
  search[ 3.33333 ] = 49.0752(36.4729)
  
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #1 Rep #1 pred log like = 107.806
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #2 Rep #1 pred log like = 15.7525
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #3 Rep #1 pred log like = 43.169
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #4 Rep #1 pred log like = 60.6085
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #5 Rep #1 pred log like = 20.3273
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #6 Rep #1 pred log like = 25.0614
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #7 Rep #1 pred log like = 79.6334
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #8 Rep #1 pred log like = 118.443
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #9 Rep #1 pred log like = 34.0061
  Running at Laplace(7.74597) None  Grid-point #3 at 0.0333333 	Fold #10 Rep #1 pred log like = 0
  AvgPred = 50.4807 with stdev = 38.0685
  Completed at 0.0333333
  Next point at 0.00333333 with value 0 and continue = 1
  search[ 0.0333333 ] = 50.4807(38.0685)
  search[ 0.333333 ] = 49.6943(36.9967)
  search[ 3.33333 ] = 49.0752(36.4729)
  
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #1 Rep #1 pred log like = 106.001
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #2 Rep #1 pred log like = 16.8111
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #3 Rep #1 pred log like = 42.498
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #4 Rep #1 pred log like = 62.1884
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #5 Rep #1 pred log like = 19.9614
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #6 Rep #1 pred log like = 25.4635
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #7 Rep #1 pred log like = 79.0526
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #8 Rep #1 pred log like = 118.246
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #9 Rep #1 pred log like = 33.9945
  Running at Laplace(24.4949) None  Grid-point #4 at 0.00333333 	Fold #10 Rep #1 pred log like = 0
  AvgPred = 50.4216 with stdev = 37.6865
  Completed at 0.00333333
  Next point at 0.00387523 with value 50.4732 and continue = 0
  search[ 0.00333333 ] = 50.4216(37.6865)
  search[ 0.0333333 ] = 50.4807(38.0685)
  search[ 0.333333 ] = 49.6943(36.9967)
  search[ 3.33333 ] = 49.0752(36.4729)
  
  
  Maximum predicted log likelihood (50.4732) estimated at:
  	0.00387523 (variance)
  	22.7178 (lambda)
  
  Fitting model at optimal hyperparameter
  Using prior: Laplace(22.7178) None 
  Sparseness = 80.112 %
  Sorting covariates by covariateId, stratumId, and rowId
  Using cross-validation selector type byPid
  Performing 10-fold cross-validation [seed = 123] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100
  Using 1 thread(s)
  Starting var = 0.1
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #1 Rep #1 pred log like = -14196.3
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #2 Rep #1 pred log like = -12619.9
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #3 Rep #1 pred log like = -12955.3
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #4 Rep #1 pred log like = -12553.9
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #5 Rep #1 pred log like = -13387.2
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #6 Rep #1 pred log like = -14249.3
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #7 Rep #1 pred log like = -13192.9
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #8 Rep #1 pred log like = -13634.9
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #9 Rep #1 pred log like = -14436.5
  Running at Laplace(4.47214) None  Grid-point #1 at 0.1 	Fold #10 Rep #1 pred log like = -13476.5
  AvgPred = -13470.3 with stdev = 632.967
  Completed at 0.1
  Next point at 1 with value 0 and continue = 1
  search[ 0.1 ] = -13470.3(632.967)
  
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #1 Rep #1 pred log like = -14196.4
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #2 Rep #1 pred log like = -12620
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #3 Rep #1 pred log like = -12955.3
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #4 Rep #1 pred log like = -12553.9
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #5 Rep #1 pred log like = -13387.2
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #6 Rep #1 pred log like = -14249.3
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #7 Rep #1 pred log like = -13193
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #8 Rep #1 pred log like = -13634.9
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #9 Rep #1 pred log like = -14436.5
  Running at Laplace(1.41421) None  Grid-point #2 at 1 	Fold #10 Rep #1 pred log like = -13476.5
  AvgPred = -13470.3 with stdev = 632.976
  Completed at 1
  Next point at 0.01 with value 0 and continue = 1
  search[ 0.1 ] = -13470.3(632.967)
  search[ 1 ] = -13470.3(632.976)
  
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #1 Rep #1 pred log like = -14196.3
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #2 Rep #1 pred log like = -12619.9
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #3 Rep #1 pred log like = -12955.3
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #4 Rep #1 pred log like = -12554.1
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #5 Rep #1 pred log like = -13387.1
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #6 Rep #1 pred log like = -14249.3
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #7 Rep #1 pred log like = -13192.9
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #8 Rep #1 pred log like = -13634.9
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #9 Rep #1 pred log like = -14436.4
  Running at Laplace(14.1421) None  Grid-point #3 at 0.01 	Fold #10 Rep #1 pred log like = -13476.3
  AvgPred = -13470.2 with stdev = 632.946
  Completed at 0.01
  Next point at 0.001 with value 0 and continue = 1
  search[ 0.01 ] = -13470.2(632.946)
  search[ 0.1 ] = -13470.3(632.967)
  search[ 1 ] = -13470.3(632.976)
  
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #1 Rep #1 pred log like = -14196.2
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #2 Rep #1 pred log like = -12619.7
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #3 Rep #1 pred log like = -12955.2
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #4 Rep #1 pred log like = -12554.4
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #5 Rep #1 pred log like = -13386.8
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #6 Rep #1 pred log like = -14249.3
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #7 Rep #1 pred log like = -13192.6
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #8 Rep #1 pred log like = -13635.1
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #9 Rep #1 pred log like = -14436.4
  Running at Laplace(44.7214) None  Grid-point #4 at 0.001 	Fold #10 Rep #1 pred log like = -13475.8
  AvgPred = -13470.2 with stdev = 632.926
  Completed at 0.001
  Next point at 0.0001 with value 0 and continue = 1
  search[ 0.001 ] = -13470.2(632.926)
  search[ 0.01 ] = -13470.2(632.946)
  search[ 0.1 ] = -13470.3(632.967)
  search[ 1 ] = -13470.3(632.976)
  
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #1 Rep #1 pred log like = -14195.9
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #2 Rep #1 pred log like = -12619.7
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #3 Rep #1 pred log like = -12955
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #4 Rep #1 pred log like = -12555.1
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #5 Rep #1 pred log like = -13387
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #6 Rep #1 pred log like = -14249.8
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #7 Rep #1 pred log like = -13192.2
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #8 Rep #1 pred log like = -13636.1
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #9 Rep #1 pred log like = -14436.4
  Running at Laplace(141.421) None  Grid-point #5 at 0.0001 	Fold #10 Rep #1 pred log like = -13475.1
  AvgPred = -13470.2 with stdev = 632.933
  Completed at 0.0001
  Next point at 8.80482e-05 with value -13470.2 and continue = 0
  search[ 0.0001 ] = -13470.2(632.933)
  search[ 0.001 ] = -13470.2(632.926)
  search[ 0.01 ] = -13470.2(632.946)
  search[ 0.1 ] = -13470.3(632.967)
  search[ 1 ] = -13470.3(632.976)
  
  
  Maximum predicted log likelihood (-13470.2) estimated at:
  	8.80482e-05 (variance)
  	150.714 (lambda)
  
  Fitting model at optimal hyperparameter
  Using prior: Laplace(150.714) None 
  Sparseness = 80.112 %
  Sorting outcomes by stratumId, time (descending), y and rowId
  Sorting covariates by covariateId, stratumId, time (descending), y, and rowId
  Sparseness = 99.09 %
  Sorting covariates by covariateId and rowId
  [ FAIL 1 | WARN 3 | SKIP 19 | PASS 302 ]
  
  ══ Skipped tests (19) ══════════════════════════════════════════════════════════
  • Current not working (1): 'test-offsetPoisson.R:41:5'
  • On CRAN (10): 'test-cv.R:37:5', 'test-cv.R:110:5', 'test-cv.R:148:5',
    'test-dataConversionStratified.R:110:3', 'test-largeBernoulli.R:26:5',
    'test-largeBernoulli.R:73:5', 'test-parameterizedPriors.R:88:5',
    'test-smallExactCLR.R:9:5', 'test-smallExactCLR.R:32:5',
    'test-weighted_cv.R:5:5'
  • Takes much too longer (1): 'test-largeProfileLikelihood.R:7:5'
  • empty test (6): 'test-believedBroken.R:75:1', 'test-cprViaSql.R:5:1',
    'test-multitypePoisson.R:113:1', 'test-multitypePoisson.R:146:1',
    'test-sqlConstructor.R:99:1', 'test-weighting.R:259:1'
  • for debugging purposes; simulation takes too long (1):
    'test-floatingPoint.R:57:5'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-dataConversionUnstratified.R:95:3'): Test poisson regression ───
  Error in `outcomes$time`: The `$` method of <tbl_lazy> is for internal use only.
  ℹ Use `dplyr::pull()` to get the values in a column.
  Backtrace:
      ▆
   1. ├─Cyclops::convertToCyclopsData(...) at test-dataConversionUnstratified.R:95:2
   2. └─Cyclops:::convertToCyclopsData.tbl_dbi(...)
   3.   ├─outcomes$time
   4.   └─dbplyr:::`$.tbl_lazy`(outcomes, "time")
   5.     └─cli::cli_abort(...)
   6.       └─rlang::abort(...)
  
  [ FAIL 1 | WARN 3 | SKIP 19 | PASS 302 ]
  Error: Test failures
  Execution halted