Running examples in ‘agridat-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gauch.soy
> ### Title: Multi-environment trial of soybeans in New York, 1977 to 1988
> ### Aliases: gauch.soy
> 
> ### ** Examples
> 
> 
> library(agridat)
> data(gauch.soy)
> dat <- gauch.soy
> 
> ## dat <- transform(dat,
> ##                  year = substring(env, 2),
> ##                  loc = substring(env, 1, 1))
> 
> # AMMI biplot
> libs(agricolae)
Installing package into ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185’
(as ‘lib’ is unspecified)
also installing the dependencies ‘bit’, ‘bit64’, ‘progress’, ‘clipr’, ‘vroom’, ‘tzdb’, ‘R.methodsS3’, ‘R.oo’, ‘R.utils’, ‘forcats’, ‘hms’, ‘readr’, ‘R.cache’, ‘haven’, ‘miniUI’, ‘styler’, ‘labelled’, ‘questionr’, ‘klaR’, ‘AlgDesign’

* installing *source* package ‘bit’ ...
** package ‘bit’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpN5scw2/R.INSTALL2a778761fa6bbc/bit/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c attrutil.c -o attrutil.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c bit.c -o bit.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c chunkutil.c -o chunkutil.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c clone.c -o clone.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c integerutil.c -o integerutil.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c merge.c -o merge.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rle.c -o rle.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sort.c -o sort.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpN5scw2/R.INSTALL2a778761fa6bbc/bit/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpN5scw2/R.INSTALL2a778761fa6bbc/bit/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpN5scw2/R.INSTALL2a778761fa6bbc/bit/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-bit/00new/bit/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bit)
* installing *source* package ‘clipr’ ...
** package ‘clipr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (clipr)
* installing *source* package ‘tzdb’ ...
** package ‘tzdb’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyODrV3/R.INSTALL2aa27974457d5/tzdb/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c api.cpp -o api.o
In file included from api.cpp:3:
/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include/cpp11/protect.hpp:324:3: warning: ‘cpp11::preserved’ defined but not used [-Wunused-variable]
  324 | } preserved;
      |   ^~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c cpp11.cpp -o cpp11.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c names.cpp -o names.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c path.cpp -o path.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c tz.cpp -o tz.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic  -g -O2 -Wall -pedantic -mtune=native  -c version.cpp -o version.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o tzdb.so api.o cpp11.o names.o path.o tz.o version.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyODrV3/R.INSTALL2aa27974457d5/tzdb/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyODrV3/R.INSTALL2aa27974457d5/tzdb/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyODrV3/R.INSTALL2aa27974457d5/tzdb/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-tzdb/00new/tzdb/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tzdb)
* installing *source* package ‘R.methodsS3’ ...
** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (R.methodsS3)
* installing *source* package ‘forcats’ ...
** package ‘forcats’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (forcats)
* installing *source* package ‘hms’ ...
** package ‘hms’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hms)
* installing *source* package ‘miniUI’ ...
** package ‘miniUI’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (miniUI)
* installing *source* package ‘AlgDesign’ ...
** package ‘AlgDesign’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphGgk1x/R.INSTALL2b0bc54840e3ca/AlgDesign/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c FederovOpt.c -o FederovOpt.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c OptBlock.c -o OptBlock.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c Utility.c -o Utility.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o AlgDesign.so FederovOpt.o OptBlock.o Utility.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphGgk1x/R.INSTALL2b0bc54840e3ca/AlgDesign/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphGgk1x/R.INSTALL2b0bc54840e3ca/AlgDesign/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphGgk1x/R.INSTALL2b0bc54840e3ca/AlgDesign/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-AlgDesign/00new/AlgDesign/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (AlgDesign)
* installing *source* package ‘bit64’ ...
** package ‘bit64’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpsn9EIC/R.INSTALL2b2ec7515182f8/bit64/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c bsearch.c -o bsearch.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c cache.c -o cache.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c hash64.c -o hash64.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c integer64.c -o integer64.o
integer64.c: In function ‘runif_integer64’:
integer64.c:998:15: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
  998 |     while( (*((long long *) &ii)) == NA_INTEGER64){
      |              ~^~~~~~~~~~~~~~~~~~
integer64.c:1006:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
 1006 |     ret[i] = min + ( (long long)(*((unsigned long long *)(&ii))) % d);
      |                                   ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sort64.c -o sort64.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sortuse64.c -o sortuse64.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpsn9EIC/R.INSTALL2b2ec7515182f8/bit64/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpsn9EIC/R.INSTALL2b2ec7515182f8/bit64/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpsn9EIC/R.INSTALL2b2ec7515182f8/bit64/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-bit64/00new/bit64/libs
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bit64)
* installing *source* package ‘progress’ ...
** package ‘progress’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (progress)
* installing *source* package ‘R.oo’ ...
** package ‘R.oo’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in setGenericS3.default(name, export = exportGeneric, envir = envir,  :
  Renamed the preexisting function getMethods to getMethods.default, which was defined in environment R.oo.
Warning in setGenericS3.default(name, export = exportGeneric, envir = envir,  :
  Renamed the preexisting function getClasses to getClasses.default, which was defined in environment R.oo.
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (R.oo)
* installing *source* package ‘vroom’ ...
** package ‘vroom’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcbePru/R.INSTALL2b774f6cc3f587/vroom/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Iconv.cpp -o Iconv.o
In file included from Iconv.cpp:2:
/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include/cpp11/protect.hpp:324:3: warning: ‘cpp11::preserved’ defined but not used [-Wunused-variable]
  324 | } preserved;
      |   ^~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c LocaleInfo.cpp -o LocaleInfo.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c altrep.cc -o altrep.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c cpp11.cpp -o cpp11.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c delimited_index.cc -o delimited_index.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c delimited_index_connection.cc -o delimited_index_connection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c fixed_width_index_connection.cc -o fixed_width_index_connection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c gen.cc -o gen.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c grisu3.c -o grisu3.o
grisu3.c: In function ‘double2diy_fp’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:209:24: note: in expansion of macro ‘CAST_U64’
  209 |         uint64_t u64 = CAST_U64(d);
      |                        ^~~~~~~~
grisu3.c: In function ‘grisu3’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:296:24: note: in expansion of macro ‘CAST_U64’
  296 |         uint64_t u64 = CAST_U64(v);
      |                        ^~~~~~~~
grisu3.c: In function ‘dtoa_grisu3’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:346:24: note: in expansion of macro ‘CAST_U64’
  346 |         uint64_t u64 = CAST_U64(v);
      |                        ^~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c guess_type.cc -o guess_type.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c iconv_file.cc -o iconv_file.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c index_collection.cc -o index_collection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom.cc -o vroom.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_big_int.cc -o vroom_big_int.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_chr.cc -o vroom_chr.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_date.cc -o vroom_date.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_dbl.cc -o vroom_dbl.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_dttm.cc -o vroom_dttm.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_errors.cpp -o vroom_errors.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_fct.cc -o vroom_fct.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_fwf.cc -o vroom_fwf.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_int.cc -o vroom_int.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_num.cc -o vroom_num.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_rle.cc -o vroom_rle.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_time.cc -o vroom_time.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/progress/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c vroom_write.cc -o vroom_write.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o vroom.so Iconv.o LocaleInfo.o altrep.o cpp11.o delimited_index.o delimited_index_connection.o fixed_width_index_connection.o gen.o grisu3.o guess_type.o iconv_file.o index_collection.o vroom.o vroom_big_int.o vroom_chr.o vroom_date.o vroom_dbl.o vroom_dttm.o vroom_errors.o vroom_fct.o vroom_fwf.o vroom_int.o vroom_num.o vroom_rle.o vroom_time.o vroom_write.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcbePru/R.INSTALL2b774f6cc3f587/vroom/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcbePru/R.INSTALL2b774f6cc3f587/vroom/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcbePru/R.INSTALL2b774f6cc3f587/vroom/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-vroom/00new/vroom/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vroom)
* installing *source* package ‘R.utils’ ...
** package ‘R.utils’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in setGenericS3.default(name, export = exportGeneric, envir = envir,  :
  Renamed the preexisting function warnings to warnings.default, which was defined in environment R.utils.
Error in setGenericS3.default(name, export = exportGeneric, envir = envir,  : 
  Could not create generic function. There is already a non-generic function named use() in ‘R.utils’ with the same name as an existing default function use.default() in ‘R.utils’.
Error: unable to load R code in package ‘R.utils’
Execution halted
ERROR: lazy loading failed for package ‘R.utils’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/R.utils’
Warning in install.packages(p) :
  installation of package ‘R.utils’ had non-zero exit status
* installing *source* package ‘readr’ ...
** package ‘readr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpG3Vpof/R.INSTALL2cbce16af01076/readr/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Collector.cpp -o Collector.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c CollectorGuess.cpp -o CollectorGuess.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Iconv.cpp -o Iconv.o
In file included from Iconv.cpp:2:
/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include/cpp11/protect.hpp:324:3: warning: ‘cpp11::preserved’ defined but not used [-Wunused-variable]
  324 | } preserved;
      |   ^~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c LocaleInfo.cpp -o LocaleInfo.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Reader.cpp -o Reader.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Source.cpp -o Source.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c Tokenizer.cpp -o Tokenizer.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c TokenizerDelim.cpp -o TokenizerDelim.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c TokenizerFwf.cpp -o TokenizerFwf.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c TokenizerWs.cpp -o TokenizerWs.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c connection.cpp -o connection.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c cpp11.cpp -o cpp11.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c datetime.cpp -o datetime.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c grisu3.c -o grisu3.o
grisu3.c: In function ‘double2diy_fp’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:209:24: note: in expansion of macro ‘CAST_U64’
  209 |         uint64_t u64 = CAST_U64(d);
      |                        ^~~~~~~~
grisu3.c: In function ‘grisu3’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:304:24: note: in expansion of macro ‘CAST_U64’
  304 |         uint64_t u64 = CAST_U64(v);
      |                        ^~~~~~~~
grisu3.c: In function ‘dtoa_grisu3’:
grisu3.c:57:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   57 | #define CAST_U64(d) (*(uint64_t*)&d)
      |                       ^
grisu3.c:356:24: note: in expansion of macro ‘CAST_U64’
  356 |         uint64_t u64 = CAST_U64(v);
      |                        ^~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c parse.cpp -o parse.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c read.cpp -o read.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c type_convert.cpp -o type_convert.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c write.cpp -o write.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/tzdb/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c write_delim.cpp -o write_delim.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o readr.so Collector.o CollectorGuess.o Iconv.o LocaleInfo.o Reader.o Source.o Tokenizer.o TokenizerDelim.o TokenizerFwf.o TokenizerWs.o connection.o cpp11.o datetime.o grisu3.o init.o parse.o read.o type_convert.o write.o write_delim.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpG3Vpof/R.INSTALL2cbce16af01076/readr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpG3Vpof/R.INSTALL2cbce16af01076/readr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpG3Vpof/R.INSTALL2cbce16af01076/readr/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-readr/00new/readr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (readr)
ERROR: dependency ‘R.utils’ is not available for package ‘R.cache’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/R.cache’
Warning in install.packages(p) :
  installation of package ‘R.cache’ had non-zero exit status
* installing *source* package ‘haven’ ...
** package ‘haven’ successfully unpacked and MD5 sums checked
** using staged installation
Found pkg-config cflags and libs!
Using PKG_CFLAGS=
Using PKG_LIBS=-lz 
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-4) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-4) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPE2D0Y/R.INSTALL2d67b8227f6e38/haven/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c tagged_na.c -o tagged_na.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/CKHashTable.c -o readstat/CKHashTable.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_bits.c -o readstat/readstat_bits.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_convert.c -o readstat/readstat_convert.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_error.c -o readstat/readstat_error.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_io_unistd.c -o readstat/readstat_io_unistd.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_malloc.c -o readstat/readstat_malloc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_metadata.c -o readstat/readstat_metadata.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_parser.c -o readstat/readstat_parser.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_value.c -o readstat/readstat_value.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_variable.c -o readstat/readstat_variable.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/readstat_writer.c -o readstat/readstat_writer.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/ieee.c -o readstat/sas/ieee.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas.c -o readstat/sas/readstat_sas.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas7bcat_read.c -o readstat/sas/readstat_sas7bcat_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas7bcat_write.c -o readstat/sas/readstat_sas7bcat_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas7bdat_read.c -o readstat/sas/readstat_sas7bdat_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas7bdat_write.c -o readstat/sas/readstat_sas7bdat_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_sas_rle.c -o readstat/sas/readstat_sas_rle.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_xport.c -o readstat/sas/readstat_xport.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_xport_parse_format.c -o readstat/sas/readstat_xport_parse_format.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_xport_read.c -o readstat/sas/readstat_xport_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/sas/readstat_xport_write.c -o readstat/sas/readstat_xport_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_por.c -o readstat/spss/readstat_por.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_por_parse.c -o readstat/spss/readstat_por_parse.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_por_read.c -o readstat/spss/readstat_por_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_por_write.c -o readstat/spss/readstat_por_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav.c -o readstat/spss/readstat_sav.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav_compress.c -o readstat/spss/readstat_sav_compress.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav_parse.c -o readstat/spss/readstat_sav_parse.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav_parse_timestamp.c -o readstat/spss/readstat_sav_parse_timestamp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav_read.c -o readstat/spss/readstat_sav_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_sav_write.c -o readstat/spss/readstat_sav_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_spss.c -o readstat/spss/readstat_spss.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_spss_parse.c -o readstat/spss/readstat_spss_parse.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_zsav_compress.c -o readstat/spss/readstat_zsav_compress.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_zsav_read.c -o readstat/spss/readstat_zsav_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/spss/readstat_zsav_write.c -o readstat/spss/readstat_zsav_write.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/stata/readstat_dta.c -o readstat/stata/readstat_dta.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/stata/readstat_dta_parse_timestamp.c -o readstat/stata/readstat_dta_parse_timestamp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/stata/readstat_dta_read.c -o readstat/stata/readstat_dta_read.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c readstat/stata/readstat_dta_write.c -o readstat/stata/readstat_dta_write.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -pedantic -mtune=native  -c DfReader.cpp -o DfReader.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -pedantic -mtune=native  -c DfWriter.cpp -o DfWriter.o
DfWriter.cpp: In member function ‘void Writer::write()’:
DfWriter.cpp:153:5: warning: ‘status’ may be used uninitialized [-Wmaybe-uninitialized]
  153 |     if (status) {
      |     ^~
DfWriter.cpp:133:22: note: ‘status’ was declared here
  133 |     readstat_error_t status;
      |                      ^~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -pedantic -mtune=native  -c cpp11.cpp -o cpp11.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -Ireadstat -DHAVE_ZLIB -fpic  -g -O2 -Wall -pedantic -mtune=native  -c haven_types.cpp -o haven_types.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o haven.so tagged_na.o readstat/CKHashTable.o readstat/readstat_bits.o readstat/readstat_convert.o readstat/readstat_error.o readstat/readstat_io_unistd.o readstat/readstat_malloc.o readstat/readstat_metadata.o readstat/readstat_parser.o readstat/readstat_value.o readstat/readstat_variable.o readstat/readstat_writer.o readstat/sas/ieee.o readstat/sas/readstat_sas.o readstat/sas/readstat_sas7bcat_read.o readstat/sas/readstat_sas7bcat_write.o readstat/sas/readstat_sas7bdat_read.o readstat/sas/readstat_sas7bdat_write.o readstat/sas/readstat_sas_rle.o readstat/sas/readstat_xport.o readstat/sas/readstat_xport_parse_format.o readstat/sas/readstat_xport_read.o readstat/sas/readstat_xport_write.o readstat/spss/readstat_por.o readstat/spss/readstat_por_parse.o readstat/spss/readstat_por_read.o readstat/spss/readstat_por_write.o readstat/spss/readstat_sav.o readstat/spss/readstat_sav_compress.o readstat/spss/readstat_sav_parse.o readstat/spss/readstat_sav_parse_timestamp.o readstat/spss/readstat_sav_read.o readstat/spss/readstat_sav_write.o readstat/spss/readstat_spss.o readstat/spss/readstat_spss_parse.o readstat/spss/readstat_zsav_compress.o readstat/spss/readstat_zsav_read.o readstat/spss/readstat_zsav_write.o readstat/stata/readstat_dta.o readstat/stata/readstat_dta_parse_timestamp.o readstat/stata/readstat_dta_read.o readstat/stata/readstat_dta_write.o DfReader.o DfWriter.o cpp11.o haven_types.o -lz -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPE2D0Y/R.INSTALL2d67b8227f6e38/haven/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPE2D0Y/R.INSTALL2d67b8227f6e38/haven/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPE2D0Y/R.INSTALL2d67b8227f6e38/haven/src'
installing to /home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/00LOCK-haven/00new/haven/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (haven)
ERROR: dependency ‘R.cache’ is not available for package ‘styler’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/styler’
Warning in install.packages(p) :
  installation of package ‘styler’ had non-zero exit status
* installing *source* package ‘labelled’ ...
** package ‘labelled’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (labelled)
ERROR: dependency ‘styler’ is not available for package ‘questionr’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/questionr’
Warning in install.packages(p) :
  installation of package ‘questionr’ had non-zero exit status
ERROR: dependency ‘questionr’ is not available for package ‘klaR’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/klaR’
Warning in install.packages(p) :
  installation of package ‘klaR’ had non-zero exit status
ERROR: dependency ‘klaR’ is not available for package ‘agricolae’
* removing ‘/home/hornik/tmp/scratch/RtmpRLoqEy/RLIBS_2a1d2371654185/agricolae’
Warning in install.packages(p) :
  installation of package ‘agricolae’ had non-zero exit status
Error in library(p, character.only = TRUE) : 
  there is no package called ‘agricolae’
Calls: libs -> library
Execution halted