Running ‘testthat.R’ [483s/368s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(CRE)
  > 
  > test_check("CRE")
  2023-04-10 17:17:01.085356 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  2023-04-10 17:17:01.179694 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-10 17:17:47.054645 gimli 2659256 CRE cre INFO:  Done with rules discovery. (WC: 45.856 seconds.)
  2023-04-10 17:17:47.075064 gimli 2659256 CRE cre INFO:  Starting inference...
  2023-04-10 17:17:47.778013 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  2023-04-10 17:18:32.889995 gimli 2659256 CRE cre INFO:  Done with rules discovery. (WC: 45.108 seconds.)
  2023-04-10 17:18:32.898603 gimli 2659256 CRE cre INFO:  Starting inference...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-10 17:18:41.093263 gimli 2659256 CRE cre INFO:  Done with inference. (WC: 8.190 seconds .)
  2023-04-10 17:18:41.097361 gimli 2659256 CRE cre INFO:  Done with running CRE function!(WC: 53.322 seconds.)
  2023-04-10 17:18:41.101137 gimli 2659256 CRE cre INFO:  Done!
  2023-04-10 17:18:41.132446 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  2023-04-10 17:18:47.781281 gimli 2659256 CRE cre INFO:  Done with rules discovery. (WC: 6.629 seconds.)
  2023-04-10 17:18:47.784689 gimli 2659256 CRE cre INFO:  Starting inference...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-10 17:18:54.79877 gimli 2659256 CRE cre INFO:  Done with inference. (WC: 7.002 seconds .)
  2023-04-10 17:18:54.802362 gimli 2659256 CRE cre INFO:  Done with running CRE function!(WC: 13.673 seconds.)
  2023-04-10 17:18:54.8056 gimli 2659256 CRE cre INFO:  Done!
  2023-04-10 17:18:54.818746 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  2023-04-10 17:18:59.907295 gimli 2659256 CRE cre INFO:  Done with rules discovery. (WC: 5.084 seconds.)
  2023-04-10 17:18:59.911204 gimli 2659256 CRE cre INFO:  Starting inference...
  2023-04-10 17:19:05.708542 gimli 2659256 CRE cre INFO:  Done with inference. (WC: 5.794 seconds .)
  2023-04-10 17:19:05.712253 gimli 2659256 CRE cre INFO:  Done with running CRE function!(WC: 10.896 seconds.)
  2023-04-10 17:19:05.715376 gimli 2659256 CRE cre INFO:  Done!
  2023-04-10 17:19:05.730796 gimli 2659256 CRE cre INFO:  Starting rules discovery...
  2023-04-10 17:19:05.734295 gimli 2659256 CRE cre INFO:  Using the provided ITE estimations...
  2023-04-10 17:19:06.553533 gimli 2659256 CRE cre INFO:  Done with rules discovery. (WC: 0.819 seconds.)
  2023-04-10 17:19:06.556898 gimli 2659256 CRE cre INFO:  Starting inference...
  2023-04-10 17:19:06.56023 gimli 2659256 CRE cre INFO:  Skipped generating ITE.The provided ITE will be used.
  2023-04-10 17:19:06.58675 gimli 2659256 CRE cre INFO:  Done with inference. (WC: 0.026 seconds .)
  2023-04-10 17:19:06.590121 gimli 2659256 CRE cre INFO:  Done with running CRE function!(WC: 0.862 seconds.)
  2023-04-10 17:19:06.593204 gimli 2659256 CRE cre INFO:  Done!
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7fb614ffc990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Using 11 control variables.
  Using 10 potential effect moderators.
  
  Beginning MCMC:
  iteration: 0 sigma: 1
  iteration: 100 sigma: 0.939757
  iteration: 200 sigma: 0.790513
  iteration: 300 sigma: 0.861269
  iteration: 400 sigma: 0.801012
  iteration: 500 sigma: 0.835339
  iteration: 600 sigma: 0.782724
  iteration: 700 sigma: 0.841266
  iteration: 800 sigma: 0.809863
  iteration: 900 sigma: 0.866562
  time for loop: 7
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Using 11 control variables.
  Using 10 potential effect moderators.
  
  Beginning MCMC:
  iteration: 0 sigma: 1
  iteration: 100 sigma: 0.833804
  iteration: 200 sigma: 0.818013
  iteration: 300 sigma: 0.773024
  iteration: 400 sigma: 0.817209
  iteration: 500 sigma: 0.827118
  iteration: 600 sigma: 0.795232
  iteration: 700 sigma: 0.798065
  iteration: 800 sigma: 0.920424
  iteration: 900 sigma: 0.808557
  time for loop: 13
  Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
    contrasts can be applied only to factors with 2 or more levels
  Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
    contrasts can be applied only to factors with 2 or more levels
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 243 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-discover_rules.R:53:3'): discover_rules works as expected! ─────
  Error in `value[[3L]](cond)`: Combination of `cutoff` and `pfer` not allowed. 
  Try to decrease the `cutoff` or increase the `pfer`. 
  See Stability Selection documentation for further details. 
  
  Original Error message: Error in run_stabsel(fitter = fit_model, args.fitter = args.fitfun, n = n, : 'fitfun' must return a list with a named element called 'selected', and an optional second element called 'path'
  
  Backtrace:
      ▆
   1. └─CRE:::discover_rules(X, ite, method_params, hyper_params) at test-discover_rules.R:53:2
   2.   └─CRE:::select_rules(...)
   3.     └─base::tryCatch(...)
   4.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   5.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   6.           └─value[[3L]](cond)
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 243 ]
  Error: Test failures
  Execution halted