Running ‘testthat.R’ [323s/295s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(CRE)
  > 
  > test_check("CRE")
  2023-04-09 15:24:51.67954 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  2023-04-09 15:24:51.715606 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-09 15:25:27.530886 gimli2 2822126 CRE cre INFO:  Done with rules discovery. (WC: 35.812 seconds.)
  2023-04-09 15:25:27.536882 gimli2 2822126 CRE cre INFO:  Starting inference...
  2023-04-09 15:25:27.848467 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  2023-04-09 15:25:59.040996 gimli2 2822126 CRE cre INFO:  Done with rules discovery. (WC: 31.189 seconds.)
  2023-04-09 15:25:59.044167 gimli2 2822126 CRE cre INFO:  Starting inference...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-09 15:26:07.261704 gimli2 2822126 CRE cre INFO:  Done with inference. (WC: 8.215 seconds .)
  2023-04-09 15:26:07.264399 gimli2 2822126 CRE cre INFO:  Done with running CRE function!(WC: 39.417 seconds.)
  2023-04-09 15:26:07.266742 gimli2 2822126 CRE cre INFO:  Done!
  2023-04-09 15:26:07.319582 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  2023-04-09 15:26:11.737828 gimli2 2822126 CRE cre INFO:  Done with rules discovery. (WC: 4.416 seconds.)
  2023-04-09 15:26:11.740589 gimli2 2822126 CRE cre INFO:  Starting inference...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  2023-04-09 15:26:17.622897 gimli2 2822126 CRE cre INFO:  Done with inference. (WC: 5.880 seconds .)
  2023-04-09 15:26:17.625519 gimli2 2822126 CRE cre INFO:  Done with running CRE function!(WC: 10.308 seconds.)
  2023-04-09 15:26:17.644185 gimli2 2822126 CRE cre INFO:  Done!
  2023-04-09 15:26:17.654044 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  2023-04-09 15:26:22.842831 gimli2 2822126 CRE cre INFO:  Done with rules discovery. (WC: 5.186 seconds.)
  2023-04-09 15:26:22.850703 gimli2 2822126 CRE cre INFO:  Starting inference...
  2023-04-09 15:26:27.442094 gimli2 2822126 CRE cre INFO:  Done with inference. (WC: 4.572 seconds .)
  2023-04-09 15:26:27.444781 gimli2 2822126 CRE cre INFO:  Done with running CRE function!(WC: 9.792 seconds.)
  2023-04-09 15:26:27.447175 gimli2 2822126 CRE cre INFO:  Done!
  2023-04-09 15:26:27.457569 gimli2 2822126 CRE cre INFO:  Starting rules discovery...
  2023-04-09 15:26:27.476544 gimli2 2822126 CRE cre INFO:  Using the provided ITE estimations...
  2023-04-09 15:26:28.282335 gimli2 2822126 CRE cre INFO:  Done with rules discovery. (WC: 0.805 seconds.)
  2023-04-09 15:26:28.285348 gimli2 2822126 CRE cre INFO:  Starting inference...
  2023-04-09 15:26:28.287964 gimli2 2822126 CRE cre INFO:  Skipped generating ITE.The provided ITE will be used.
  2023-04-09 15:26:28.307898 gimli2 2822126 CRE cre INFO:  Done with inference. (WC: 0.020 seconds .)
  2023-04-09 15:26:28.310585 gimli2 2822126 CRE cre INFO:  Done with running CRE function!(WC: 0.855 seconds.)
  2023-04-09 15:26:28.313024 gimli2 2822126 CRE cre INFO:  Done!
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  
   *** caught segfault ***
  address 0x7f2e96ff7990, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  Error in setinfo.xgb.DMatrix(dmat, names(p), p[[1]]) : 
    The length of labels must equal to the number of rows in the input data
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Using 11 control variables.
  Using 10 potential effect moderators.
  
  Beginning MCMC:
  iteration: 0 sigma: 1
  iteration: 100 sigma: 0.939757
  iteration: 200 sigma: 0.790513
  iteration: 300 sigma: 0.861269
  iteration: 400 sigma: 0.801012
  iteration: 500 sigma: 0.835339
  iteration: 600 sigma: 0.782724
  iteration: 700 sigma: 0.841266
  iteration: 800 sigma: 0.809863
  iteration: 900 sigma: 0.866562
  time for loop: 6
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  Using 11 control variables.
  Using 10 potential effect moderators.
  
  Beginning MCMC:
  iteration: 0 sigma: 1
  iteration: 100 sigma: 0.833804
  iteration: 200 sigma: 0.818013
  iteration: 300 sigma: 0.773024
  iteration: 400 sigma: 0.817209
  iteration: 500 sigma: 0.827118
  iteration: 600 sigma: 0.795232
  iteration: 700 sigma: 0.798065
  iteration: 800 sigma: 0.920424
  iteration: 900 sigma: 0.808557
  time for loop: 10
  Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
    contrasts can be applied only to factors with 2 or more levels
  Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
    contrasts can be applied only to factors with 2 or more levels
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  fitting treatment model via method 'bart'
  fitting response model via method 'bart'
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 243 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-discover_rules.R:53:3'): discover_rules works as expected! ─────
  Error in `value[[3L]](cond)`: Combination of `cutoff` and `pfer` not allowed. 
  Try to decrease the `cutoff` or increase the `pfer`. 
  See Stability Selection documentation for further details. 
  
  Original Error message: Error in run_stabsel(fitter = fit_model, args.fitter = args.fitfun, n = n, : 'fitfun' must return a list with a named element called 'selected', and an optional second element called 'path'
  
  Backtrace:
      ▆
   1. └─CRE:::discover_rules(X, ite, method_params, hyper_params) at test-discover_rules.R:53:2
   2.   └─CRE:::select_rules(...)
   3.     └─base::tryCatch(...)
   4.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   5.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   6.           └─value[[3L]](cond)
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 243 ]
  Error: Test failures
  Execution halted