Running ‘testthat.R’ [3s/379s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(queryup)
  > 
  > test_check("queryup")
  Query not supported
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Query not supported
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Query not supported
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Query not supported
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  Request failed : Error in handle_url(handle, url, ...) : 
    Must specify at least one of url or handle
  
  
  UniProt API request failed : 
  Client error: (404) Not Found
  
  UniProt API request failed : 
  Client error: (400) Bad Request
  'acc_id' is not a valid search field
  
  UniProt API request failed : 
  Client error: (400) Bad Request
  Invalid fields parameter value 'acc_id'
  300 invalid values were found (CON_A4Q9F4, CON_B1AWN4, CON_E9PX95, CON_A2AG06, CON_A2AWP0, CON_A2AHL1, CON_A2AI05, CON_A2A6Q5, CON_A2ASS6, CON_A0A088MLT8, ...) and removed from the query.
  Field 'accession_id' with no valid entries has been removed from query.
  600 invalid values were found (CON_A3FIN4, CON_A4Q9F4, CON_E9PZ19, CON_A6X8Z5, CON_A0A140LI88, CON_E9PX95, CON_A2A6M5, CON_A7TZE6, CON_B6A8R8, CON_A2AN08, ...) and removed from the query.
  Field 'accession_id' with no valid entries has been removed from query.
  Field 'accession' with no valid entries has been removed from query.
  3 invalid values were found (REV_P47941, CON_P22682, P226) and removed from the query.
  
  UniProt API request failed : 
  Client error: (404) Not Found
  Querying the UniProt database...
  
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  Querying the UniProt database...
  
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  Querying the UniProt database...
  
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  Querying the UniProt database...
  
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  Querying the UniProt database...
  
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  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 31 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-query_uniprot.R:16:5'): Long queries work ────────────────────
  setequal(res[["Entry"]], ids) (`actual`) not equal to TRUE (`expected`).
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-query_uniprot.R:28:5'): Long queries with no columns defined work ──
  setequal(res[["Entry"]], ids) (`actual`) not equal to TRUE (`expected`).
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 31 ]
  Error: Test failures
  Execution halted