Running 'testthat.R' [197s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(CausalGPS)
  > 
  > Sys.setenv("R_TESTS" = "")
  > library(testthat)
  > test_check("CausalGPS")
  2023-02-13 04:29:20 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:29:22 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 196) ... 
  2023-02-13 04:29:23 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  21.2300763979248 in  0.5  radius.
  2023-02-13 04:29:23 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 196)
  2023-02-13 04:29:27 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 100) ... 
  2023-02-13 04:29:27 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -8.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -7.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -6.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -5.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -4.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -3.74760785492387 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  21.2523921450761 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  22.2523921450761 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  23.2523921450761 in  0.5  radius.
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 100)
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 1000) ... 
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 1000)
  2023-02-13 04:29:28 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:29:45 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 98) ... 
  2023-02-13 04:29:45 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  17.0145640770203 in  0.5  radius.
  2023-02-13 04:29:45 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 2058)
  2023-02-13 04:29:48 CRANWIN 18876 CausalGPS estimate_gps WARN:  Vector w has 1 missing values.
  2023-02-13 04:29:48 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:30:13 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 196) ... 
  2023-02-13 04:30:13 CRANWIN 18876 CausalGPS FUN WARN:  There is no data to match with  -1.26798024301974 in  0.5  radius.
  2023-02-13 04:30:13 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 4704)
  2023-02-13 04:31:32 CRANWIN 18876 CausalGPS estimate_npmetric_erf INFO:  The band width with the minimum risk value: 0.6.
  2023-02-13 04:31:34 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:40 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 490) ... 
  2023-02-13 04:31:41 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 490)
  2023-02-13 04:31:41 CRANWIN 18876 CausalGPS generate_pseudo_pop WARN:  Effective sample size is less than recommended.Current: 26.1426863179163, recommended min value: 49.
  2023-02-13 04:31:41 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:44 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS generate_pseudo_pop WARN:  Effective sample size is less than recommended.Current: 20.5023661048217, recommended min value: 46.
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:45 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:48 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:31:48 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:31:48 CRANWIN 18876 CausalGPS generate_pseudo_pop WARN:  Effective sample size is less than recommended.Current: 3.24085816396445, recommended min value: 46.
  2023-02-13 04:31:48 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:31:52 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:31:52 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:31:55 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:31:55 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:31:58 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:31:59 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:02 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:02 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:02 CRANWIN 18876 CausalGPS generate_pseudo_pop WARN:  Effective sample size is less than recommended.Current: 20.5161021345085, recommended min value: 46.
  2023-02-13 04:32:02 CRANWIN 18876 CausalGPS log_system_info INFO:  System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.1.3 (2022-03-10), detected cores: 32
  2023-02-13 04:32:04 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:04 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:06 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:07 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:09 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:09 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:11 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:11 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:13 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:14 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:16 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:16 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:18 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Starting compiling pseudo population  (original data size: 460) ... 
  2023-02-13 04:32:18 CRANWIN 18876 CausalGPS compile_pseudo_pop INFO:  Finished compiling pseudo population  (Pseudo population data size: 460)
  2023-02-13 04:32:18 CRANWIN 18876 CausalGPS generate_pseudo_pop WARN:  Effective sample size is less than recommended.Current: 22.7748385392029, recommended min value: 46.
  [ FAIL 8 | WARN 24 | SKIP 3 | PASS 196 ]
  
  == Skipped tests ===============================================================
  * earth cannot be loaded (3)
  
  == Failed tests ================================================================
  -- Failure ('test-absolute_weighted_corr_fun.R:10'): absoulte_weighted_corr_fun works as expected. --
  val1$mean_absolute_corr not equal to 0.09003267.
  1/1 mismatches
  [1] 0.0851 - 0.09 == -0.00489
  -- Failure ('test-absolute_weighted_corr_fun.R:11'): absoulte_weighted_corr_fun works as expected. --
  val1$median_absolute_corr not equal to 0.07821234.
  1/1 mismatches
  [1] 0.0691 - 0.0782 == -0.00908
  -- Failure ('test-absolute_weighted_corr_fun.R:12'): absoulte_weighted_corr_fun works as expected. --
  val1$maximal_absolute_corr not equal to 0.2222087.
  1/1 mismatches
  [1] 0.218 - 0.222 == -0.00434
  -- Failure ('test-generate_pseudo_pop.R:37'): generate_pseudo_pop works as expected. --
  ps_pop1$adjusted_corr_results$mean_absolute_corr not equal to 0.2580037.
  1/1 mismatches
  [1] 0.258 - 0.258 == 4.44e-05
  -- Failure ('test-generate_pseudo_pop.R:75'): generate_pseudo_pop works as expected. --
  ps_pop2$adjusted_corr_results$mean_absolute_corr not equal to 0.2243034.
  1/1 mismatches
  [1] 0.224 - 0.224 == -0.000124
  -- Failure ('test-generate_pseudo_pop.R:279'): generate_pseudo_pop works as expected. --
  ps_pop3$adjusted_corr_results$mean_absolute_corr not equal to 0.4481222.
  1/1 mismatches
  [1] 0.375 - 0.448 == -0.0731
  -- Failure ('test-generate_pseudo_pop.R:306'): generate_pseudo_pop works as expected. --
  ps_pop4$adjusted_corr_results$mean_absolute_corr not equal to 0.2210705.
  1/1 mismatches
  [1] 0.221 - 0.221 == -9.3e-05
  -- Failure ('test-generate_pseudo_pop.R:333'): generate_pseudo_pop works as expected. --
  ps_pop5$adjusted_corr_results$mean_absolute_corr not equal to 0.1078871.
  1/1 mismatches
  [1] 0.108 - 0.108 == -0.000196
  
  [ FAIL 8 | WARN 24 | SKIP 3 | PASS 196 ]
  Error: Test failures
  Execution halted