Error(s) in re-building vignettes:
  ...
--- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave
Loading required package: R2BayesX
Installing package into '/home/hornik/tmp/scratch/Rtmp4qiTw1/RLIBS_8540a3c92e9fb'
(as 'lib' is unspecified)
also installing the dependency 'BayesXsrc'

trying URL ‘http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-3.tar.gz’
Content type 'application/x-gzip' length 1307334 bytes (1.2 MB)
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downloaded 1.2 MB

trying URL ‘http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-3.tar.gz’
Content type 'application/x-gzip' length 787563 bytes (769 KB)
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downloaded 769 KB

* installing *source* package ‘BayesXsrc’ ...
** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLDlc0W/R.INSTALL9dd4123af2c95/BayesXsrc/src'
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/statmat.h:26,
                 from bayesxsrc/mcmc/distribution.h:26,
                 from bayesxsrc/andrea/cox.h:26,
                 from bayesxsrc/andrea/baseline.h:26,
                 from bayesxsrc/andrea/baseline.cpp:24:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
bayesxsrc/andrea/baseline.cpp: In constructor ‘MCMC::pspline_baseline::pspline_baseline(MCMC::MCMCoptions*, MCMC::DISTRIBUTION*, MCMC::FULLCOND_const*, const datamatrix&, const datamatrix&, const unsigned int&, const unsigned int&, const MCMC::knotpos&, const double&, const unsigned int&, const unsigned int&, const MCMC::fieldtype&, const ST::string&, const ST::string&, const ST::string&, const int&, const unsigned int&, const datamatrix&)’:
bayesxsrc/andrea/baseline.cpp:184:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  184 |     for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |             ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:245:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  245 |   for(i=0;i<max;i++)
      |           ~^~~~
bayesxsrc/andrea/baseline.cpp:267:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  267 |   for(i=0;i<int_knots.rows();i++)
      |           ~^~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp: In constructor ‘MCMC::pspline_baseline::pspline_baseline(MCMC::MCMCoptions*, MCMC::DISTRIBUTION*, MCMC::FULLCOND_const*, const datamatrix&, const double&, const double&, const unsigned int&, const unsigned int&, const MCMC::knotpos&, const double&, const unsigned int&, const unsigned int&, const MCMC::fieldtype&, const ST::string&, const ST::string&, const ST::string&, const int&, const unsigned int&, const datamatrix&, const bool&, const bool&)’:
bayesxsrc/andrea/baseline.cpp:426:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  426 |     for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |             ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:487:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  487 |   for(i=0;i<max;i++)
      |           ~^~~~
bayesxsrc/andrea/baseline.cpp:504:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  504 |   for(j=0;j<int_knots.rows();j++)
      |           ~^~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:509:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  509 |   for(i=0;i<int_knots.rows();i++)
      |           ~^~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:512:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  512 |     for(j=0;j<nrpar;j++)
      |             ~^~~~~~
bayesxsrc/andrea/baseline.cpp:527:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  527 |   for(i=0;i<zi.rows();i++)
      |           ~^~~~~~~~~~
bayesxsrc/andrea/baseline.cpp: In member function ‘virtual void MCMC::pspline_baseline::update()’:
bayesxsrc/andrea/baseline.cpp:1387:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type’ {aka ‘unsigned int’} [-Wsign-compare]
 1387 |   for(j=0;j<matquant[blocksize-min];j++)
bayesxsrc/andrea/baseline.cpp:1406:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1406 |     for(k=an-1;k<en;k++,workbeta++,workbetaold++)
      |                ~^~~
bayesxsrc/andrea/baseline.cpp:1428:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1428 |       for(k=an-1;k<en;k++,workbeta++,workbetaold++)
      |                  ~^~~
bayesxsrc/andrea/baseline.cpp:1438:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type’ {aka ‘unsigned int’} [-Wsign-compare]
 1438 |     if (j == matquant[blocksize-min]-2)
      |         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:1449:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1449 |     for(i=0;i<nrpar;i++)
      |             ~^~~~~~
bayesxsrc/andrea/baseline.cpp:1458:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
 1458 |         for(i=0;i<likep->get_nrobs();i++)
      |                 ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:1509:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
 1509 |         for(i=0;i<likep->get_nrobs();i++)
      |                 ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/baseline.cpp:1530:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
 1530 |       for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |               ~^~~~~~~~~~~~~~~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/andrea/cox.cpp -o bayesxsrc/andrea/cox.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/statmat.h:26,
                 from bayesxsrc/mcmc/distribution.h:26,
                 from bayesxsrc/andrea/cox.h:26,
                 from bayesxsrc/andrea/cox.cpp:24:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/andrea/IWLS_baseline.cpp -o bayesxsrc/andrea/IWLS_baseline.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/statmat.h:26,
                 from bayesxsrc/mcmc/mcmc.h:27,
                 from bayesxsrc/andrea/IWLS_baseline.h:26,
                 from bayesxsrc/andrea/IWLS_baseline.cpp:20:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
In file included from bayesxsrc/bib/envmatrix.h:484,
                 from bayesxsrc/mcmc/mcmc_nonpbasis.h:33,
                 from bayesxsrc/andrea/IWLS_baseline.h:31:
bayesxsrc/bib/envmatrix.cpp: In instantiation of ‘void envmatrix<T>::decomp() [with T = double]’:
bayesxsrc/bib/envmatrix.cpp:2099:5:   required from ‘void envmatrix<T>::solveU(datamatrix&, const datamatrix&) [with T = double; datamatrix = statmatrix<double>]’
bayesxsrc/andrea/IWLS_baseline.cpp:497:18:   required from here
bayesxsrc/bib/envmatrix.cpp:568:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  568 |               k<iband;
      |               ~^~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/andrea/multibaseline.cpp -o bayesxsrc/andrea/multibaseline.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/statmat.h:26,
                 from bayesxsrc/mcmc/distribution.h:26,
                 from bayesxsrc/andrea/multistate.h:26,
                 from bayesxsrc/andrea/multibaseline.h:26,
                 from bayesxsrc/andrea/multibaseline.cpp:24:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp: In constructor ‘MCMC::pspline_multibaseline::pspline_multibaseline(MCMC::MCMCoptions*, MCMC::DISTRIBUTION*, MCMC::FULLCOND_const*, const datamatrix&, const double&, const double&, const unsigned int&, const unsigned int&, const MCMC::knotpos&, const double&, const unsigned int&, const unsigned int&, const MCMC::fieldtype&, const ST::string&, const ST::string&, const ST::string&, const int&, const unsigned int&, const datamatrix&, const datamatrix&, const bool&)’:
bayesxsrc/andrea/multibaseline.cpp:71:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   71 |   for(i=0;i<zi.rows();i++)
      |           ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:84:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   84 |     for(i=0;i<zi.rows();i++)
      |             ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:92:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   92 |     for(i=0;i<zi.rows();i++)
      |             ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:103:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  103 |     for(i=0;i<2*zi.rows();i++)
      |             ~^~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:148:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  148 |     for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |             ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:207:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  207 |   for(i=0;i<max;i++)
      |           ~^~~~
bayesxsrc/andrea/multibaseline.cpp:238:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  238 |     for(i=0;i<int_knots_l[col].rows();i++)
      |             ~^~~~~~~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:254:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  254 |     for(i=0;i<int_knots.rows();i++)
      |             ~^~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:265:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  265 |      for(i=0;i<zi.rows();i++)
      |              ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp: In constructor ‘MCMC::pspline_multibaseline::pspline_multibaseline(MCMC::MCMCoptions*, MCMC::DISTRIBUTION*, MCMC::FULLCOND_const*, const datamatrix&, const datamatrix&, const unsigned int&, const unsigned int&, const MCMC::knotpos&, const double&, const unsigned int&, const unsigned int&, const MCMC::fieldtype&, const ST::string&, const ST::string&, const ST::string&, const int&, const unsigned int&, const datamatrix&, const datamatrix&, const bool&)’:
bayesxsrc/andrea/multibaseline.cpp:316:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  316 |   for(i=0;i<z.rows();i++)
      |           ~^~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:341:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  341 |   for(i=0;i<zi.rows();i++)
      |           ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:379:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  379 |     for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |             ~^~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:438:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  438 |   for(i=0;i<max;i++)
      |           ~^~~~
bayesxsrc/andrea/multibaseline.cpp:461:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  461 |   for(i=0;i<int_knots.rows();i++)
      |           ~^~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:472:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  472 |      for(i=0;i<zi.rows();i++)
      |              ~^~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp: In member function ‘virtual void MCMC::pspline_multibaseline::update()’:
bayesxsrc/andrea/multibaseline.cpp:700:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  700 |     for(i=0;i<nrpar;i++)
      |             ~^~~~~~
bayesxsrc/andrea/multibaseline.cpp:716:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  716 |           for(i=0;i<zi_teil[col].rows();i++)
      |                   ~^~~~~~~~~~~~~~~~~~~~
bayesxsrc/andrea/multibaseline.cpp:741:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  741 |       for(i=0;i<likep->get_nrobs();i++,freqwork++,workindex++)
      |               ~^~~~~~~~~~~~~~~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/andrea/multistate.cpp -o bayesxsrc/andrea/multistate.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/statmat.h:26,
                 from bayesxsrc/mcmc/distribution.h:26,
                 from bayesxsrc/andrea/multistate.h:26,
                 from bayesxsrc/andrea/multistate.cpp:24:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/bib/Random.cpp -o bayesxsrc/bib/Random.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/Random.h:33,
                 from bayesxsrc/bib/Random.cpp:25:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
bayesxsrc/bib/Random.cpp: In function ‘double randnumbers::kssample()’:
bayesxsrc/bib/Random.cpp:349:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  349 |       for(j=2; j<=(SQR(n)-1); j++)
      |       ^~~
bayesxsrc/bib/Random.cpp:351:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  351 |          W = W - SQR(n)*Q;
      |          ^
bayesxsrc/bib/Random.cpp:376:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  376 |         if (U3 >= W)
      |         ^~
bayesxsrc/bib/Random.cpp:378:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  378 |           n++;
      |           ^
bayesxsrc/bib/Random.cpp: In function ‘double randnumbers::pbivnu(const double&, const double&, const double&)’:
bayesxsrc/bib/Random.cpp:1219:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1219 |         for(int j=0; j<w.size(); j++)
      |                      ~^~~~~~~~~
g++-12 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib"  -I"bayesxsrc/alex"  -I"bayesxsrc/adaptiv"  -I"bayesxsrc/andrea"  -I"bayesxsrc/dag"  -I"bayesxsrc/graph"  -I"bayesxsrc/mcmc"  -I"bayesxsrc/psplines"  -I"bayesxsrc/samson"  -I"bayesxsrc/leyre"  -I"bayesxsrc/structadd"  `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=2   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c bayesxsrc/bib/adminparse_gnu.cpp -o bayesxsrc/bib/adminparse_gnu.o
In file included from bayesxsrc/bib/tpremat.h:227,
                 from bayesxsrc/bib/tmatrix.h:34,
                 from bayesxsrc/bib/Random.h:33,
                 from bayesxsrc/bib/realobs.h:32,
                 from bayesxsrc/bib/data.h:29,
                 from bayesxsrc/bib/adminparse_gnu.h:27,
                 from bayesxsrc/bib/adminparse_gnu.cpp:22:
bayesxsrc/bib/tpremat.cpp: In member function ‘PreMatrix<T> PreMatrix<T>::operator*(T) const’:
bayesxsrc/bib/tpremat.cpp:357:4: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  357 |    else if ( v == T( 0 ) )
      |    ^~~~
bayesxsrc/bib/tpremat.cpp:365:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  365 |         PreMatrix<T> result( this->rows( ), this->cols( ) );
      |         ^~~~~~~~~
bayesxsrc/bib/data.h: At global scope:
bayesxsrc/bib/data.h:282:3: error: reference to ‘data’ is ambiguous
  282 |   data datarep;
      |   ^~~~
In file included from /usr/include/c++/12/string:52,
                 from /usr/include/c++/12/bits/locale_classes.h:40,
                 from /usr/include/c++/12/bits/ios_base.h:41,
                 from /usr/include/c++/12/ios:42,
                 from /usr/include/c++/12/istream:38,
                 from /usr/include/c++/12/fstream:38,
                 from bayesxsrc/bib/adminparse_gnu.h:26:
/usr/include/c++/12/bits/range_access.h:343:5: note: candidates are: ‘template<class _Tp> constexpr const _Tp* std::data(initializer_list<_Tp>)’
  343 |     data(initializer_list<_Tp> __il) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:333:5: note:                 ‘template<class _Tp, long unsigned int _Nm> constexpr _Tp* std::data(_Tp (&)[_Nm])’
  333 |     data(_Tp (&__array)[_Nm]) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:322:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(const _Container&)’
  322 |     data(const _Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:311:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(_Container&)’
  311 |     data(_Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
bayesxsrc/bib/data.h:58:21: note:                 ‘class data’
   58 | class __EXPORT_TYPE data
      |                     ^~~~
bayesxsrc/bib/data.h: In constructor ‘dataset::dataset()’:
bayesxsrc/bib/data.h:319:10: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  319 |          datarep = data();
      |          ^~~~~~~
      |          dataset
bayesxsrc/bib/data.h:319:20: error: reference to ‘data’ is ambiguous
  319 |          datarep = data();
      |                    ^~~~
/usr/include/c++/12/bits/range_access.h:343:5: note: candidates are: ‘template<class _Tp> constexpr const _Tp* std::data(initializer_list<_Tp>)’
  343 |     data(initializer_list<_Tp> __il) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:333:5: note:                 ‘template<class _Tp, long unsigned int _Nm> constexpr _Tp* std::data(_Tp (&)[_Nm])’
  333 |     data(_Tp (&__array)[_Nm]) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:322:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(const _Container&)’
  322 |     data(const _Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:311:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(_Container&)’
  311 |     data(_Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
bayesxsrc/bib/data.h:58:21: note:                 ‘class data’
   58 | class __EXPORT_TYPE data
      |                     ^~~~
bayesxsrc/bib/data.h: In constructor ‘dataset::dataset(const ST::string&)’:
bayesxsrc/bib/data.h:328:10: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  328 |          datarep = data();
      |          ^~~~~~~
      |          dataset
bayesxsrc/bib/data.h:328:20: error: reference to ‘data’ is ambiguous
  328 |          datarep = data();
      |                    ^~~~
/usr/include/c++/12/bits/range_access.h:343:5: note: candidates are: ‘template<class _Tp> constexpr const _Tp* std::data(initializer_list<_Tp>)’
  343 |     data(initializer_list<_Tp> __il) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:333:5: note:                 ‘template<class _Tp, long unsigned int _Nm> constexpr _Tp* std::data(_Tp (&)[_Nm])’
  333 |     data(_Tp (&__array)[_Nm]) noexcept
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:322:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(const _Container&)’
  322 |     data(const _Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
/usr/include/c++/12/bits/range_access.h:311:5: note:                 ‘template<class _Container> constexpr decltype (__cont.data()) std::data(_Container&)’
  311 |     data(_Container& __cont) noexcept(noexcept(__cont.data()))
      |     ^~~~
bayesxsrc/bib/data.h:58:21: note:                 ‘class data’
   58 | class __EXPORT_TYPE data
      |                     ^~~~
bayesxsrc/bib/data.h: In function ‘std::ostream& operator<<(std::ostream&, dataset&)’:
bayesxsrc/bib/data.h:423:26: error: ‘class dataset’ has no member named ‘datarep’; did you mean ‘dataset’?
  423 |          return out << d.datarep;
      |                          ^~~~~~~
      |                          dataset
bayesxsrc/bib/data.h: In member function ‘const std::__cxx11::list<ST::string>& dataset::getVarnames() const’:
bayesxsrc/bib/data.h:440:17: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  440 |          return datarep.varnames;
      |                 ^~~~~~~
      |                 dataset
bayesxsrc/bib/data.h: In member function ‘int dataset::findvar(ST::string&)’:
bayesxsrc/bib/data.h:585:17: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  585 |          return datarep.findvar(name);
      |                 ^~~~~~~
      |                 dataset
bayesxsrc/bib/data.h: In member function ‘unsigned int dataset::varnr()’:
bayesxsrc/bib/data.h:594:17: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  594 |          return datarep.varnames.size();
      |                 ^~~~~~~
      |                 dataset
bayesxsrc/bib/data.h: In member function ‘void dataset::set_iterator(const unsigned int&)’:
bayesxsrc/bib/data.h:604:13: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  604 |     varit = datarep.variables.begin();
      |             ^~~~~~~
      |             dataset
bayesxsrc/bib/data.h: In member function ‘const double& dataset::getvalue(const unsigned int&)’:
bayesxsrc/bib/data.h:618:22: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  618 |     return ((*varit)[datarep.index[nr]]).getvalue();
      |                      ^~~~~~~
      |                      dataset
bayesxsrc/bib/data.h: In member function ‘const double& dataset::getvalue(const unsigned int&, std::__cxx11::list<realob::realvar>::iterator&)’:
bayesxsrc/bib/data.h:625:20: error: ‘datarep’ was not declared in this scope; did you mean ‘dataset’?
  625 |     return ((*vit)[datarep.index[nr]]).getvalue();
      |                    ^~~~~~~
      |                    dataset
make[1]: *** [/home/hornik/tmp/R.check/r-devel-gcc/Work/build/etc/Makeconf:198: bayesxsrc/bib/adminparse_gnu.o] Error 1
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLDlc0W/R.INSTALL9dd4123af2c95/BayesXsrc/src'
ERROR: compilation failed for package ‘BayesXsrc’
* removing ‘/home/hornik/tmp/scratch/Rtmp4qiTw1/RLIBS_8540a3c92e9fb/BayesXsrc’
ERROR: dependencies ‘BayesXsrc’, ‘mgcv’ are not available for package ‘R2BayesX’
* removing ‘/home/hornik/tmp/scratch/Rtmp4qiTw1/RLIBS_8540a3c92e9fb/R2BayesX’

The downloaded source packages are in
	'/home/hornik/tmp/scratch/RtmpSE87vy/downloaded_packages'
Loading required package: gamboostLSS
Loading required package: mboost
Loading required package: parallel
Loading required package: stabs

Attaching package: 'gamboostLSS'

The following object is masked from 'package:stats':

    model.weights


Error: processing vignette ‘gamboostLSS_Tutorial.Rnw’ failed with diagnostics:
 chunk 11 (label = india_stunting1) 
Error in library("R2BayesX") : there is no package called 'R2BayesX'

--- failed re-building 'gamboostLSS_Tutorial.Rnw'

SUMMARY: processing the following file failed:
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