Running ‘testthat.R’ [11s/150s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(occCite)
  > 
  > test_check("occCite")
  	
   OccCite query occurred on: 01 August, 2022
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: GBIF Backbone Taxonomy
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name                        Best Match
  1 Protea cynaroides Protea cynaroides (L.) L. L. (L.)
    Taxonomic Databases w/ Matches
  1         GBIF Backbone Taxonomy
  	
   Sources for occurrence data: gbif, bien
   	
                              Species Occurrences Sources
  1 Protea cynaroides (L.) L. L. (L.)        2334      17
  	
   GBIF dataset DOIs: 	
  
                              Species GBIF Access Date           GBIF DOI
  1 Protea cynaroides (L.) L. L. (L.)       2022-03-02 10.15468/dl.ztbx8c
  	
   OccCite query occurred on: 01 August, 2022
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: GBIF Backbone Taxonomy
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name                        Best Match
  1 Protea cynaroides Protea cynaroides (L.) L. L. (L.)
    Taxonomic Databases w/ Matches
  1         GBIF Backbone Taxonomy
  	
   Sources for occurrence data: gbif
   	
                              Species Occurrences Sources
  1 Protea cynaroides (L.) L. L. (L.)        2189      13
  	
   GBIF dataset DOIs: 	
  
                              Species GBIF Access Date           GBIF DOI
  1 Protea cynaroides (L.) L. L. (L.)       2022-03-02 10.15468/dl.ztbx8c
  	
   OccCite query occurred on: 01 August, 2022
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: GBIF Backbone Taxonomy
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name                        Best Match
  1 Protea cynaroides Protea cynaroides (L.) L. L. (L.)
    Taxonomic Databases w/ Matches
  1         GBIF Backbone Taxonomy
  	
   Sources for occurrence data: bien
   	
                              Species Occurrences Sources
  1 Protea cynaroides (L.) L. L. (L.)         145       4
  [ FAIL 12 | WARN 1 | SKIP 17 | PASS 169 ]
  
  ══ Skipped tests ═══════════════════════════════════════════════════════════════
  • On CRAN (16)
  • internet connection established (1)
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-occCitation.R:79'): outputs for BIEN results are as expected ──
  class(testResults) == "occCiteCitation" is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:81'): outputs for BIEN results are as expected ──
  "occCitationResults" %in% names(testResults) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:82'): outputs for BIEN results are as expected ──
  class(testResults$occCitationResults[[1]]) not equal to "data.frame".
  1/1 mismatches
  x[1]: "NULL"
  y[1]: "data.frame"
  ── Failure ('test-occCitation.R:87'): outputs for BIEN results are as expected ──
  "occSearch" %in% names(testResults$occCitationResults[[1]]) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:89'): outputs for BIEN results are as expected ──
  class(testResults$occCitationResults[[1]]$occSearch) not equal to "character".
  1/1 mismatches
  x[1]: "NULL"
  y[1]: "character"
  ── Failure ('test-occCitation.R:93'): outputs for BIEN results are as expected ──
  "Dataset Key" %in% names(testResults$occCitationResults[[1]]) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:95'): outputs for BIEN results are as expected ──
  class(testResults$occCitationResults[[1]]$`Dataset Key`) not equal to "character".
  1/1 mismatches
  x[1]: "NULL"
  y[1]: "character"
  ── Failure ('test-occCitation.R:99'): outputs for BIEN results are as expected ──
  "Citation" %in% names(testResults$occCitationResults[[1]]) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:101'): outputs for BIEN results are as expected ──
  class(testResults$occCitationResults[[1]]$Citation) not equal to "character".
  1/1 mismatches
  x[1]: "NULL"
  y[1]: "character"
  ── Failure ('test-occCitation.R:105'): outputs for BIEN results are as expected ──
  "Accession Date" %in% names(testResults$occCitationResults[[1]]) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:108'): outputs for BIEN results are as expected ──
  "Number of Occurrences" %in% names(testResults$occCitationResults[[1]]) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  ── Failure ('test-occCitation.R:110'): outputs for BIEN results are as expected ──
  is.numeric(testResults$occCitationResults[[1]]$`Number of Occurrences`) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 12 | WARN 1 | SKIP 17 | PASS 169 ]
  Error: Test failures
  Execution halted