Error(s) in re-building vignettes:
--- re-building 'cast01-CAST-intro.Rmd' using rmarkdown
Linking to GEOS 3.10.2, GDAL 3.4.1, PROJ 7.2.1; sf_use_s2() is TRUE

Attaching package: 'lubridate'

The following objects are masked from 'package:base':

    date, intersect, setdiff, union

Loading required package: lattice
Loading required package: sp
Note: No increase in performance found using more than 3 variables

Attaching package: 'latticeExtra'

The following object is masked from 'package:ggplot2':

    layer

No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
No trainDI provided. Computing DI of training data...
negative weights were set to 0
Computing DI of newdata...
Computing AOA...
--- finished re-building 'cast01-CAST-intro.Rmd'

--- re-building 'cast02-AOA-tutorial.Rmd' using rmarkdown
Loading required package: raster
Loading required package: sp
Loading required package: ggplot2
Loading required package: lattice
Linking to GEOS 3.10.2, GDAL 3.4.1, PROJ 7.2.1; sf_use_s2() is TRUE
Loading required package: viridisLite

Attaching package: 'latticeExtra'

The following object is masked from 'package:ggplot2':

    layer

 - Perfoming the pca

 - Defining the response of the species along PCA axes

    - You have provided standard deviations, so argument niche.breadth will be ignored.

 - Calculating suitability values

   The final environmental suitability was rescaled between 0 and 1.
                  To disable, set argument rescale = FALSE
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
Warning: Removed 131 rows containing non-finite values (stat_density).
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
Warning: Removed 131 rows containing non-finite values (stat_density).
Warning: Removed 131 rows containing non-finite values (stat_density).
Warning in a - b :
  longer object length is not a multiple of shorter object length
Warning in a - b :
  longer object length is not a multiple of shorter object length
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
Warning in nominalTrainWorkflow(x = x, y = y, wts = weights, info = trainInfo,  :
  There were missing values in resampled performance measures.
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
Warning in nominalTrainWorkflow(x = x, y = y, wts = weights, info = trainInfo,  :
  There were missing values in resampled performance measures.
No trainDI provided. Computing DI of training data...
Computing DI of newdata...
Computing AOA...
No trainDI provided. Computing DI of training data...
negative weights were set to 0
note: Either no model was given or no CV was used for model training. The DI threshold is therefore based on all training data
Computing DI of newdata...
Computing AOA...
Error: processing vignette 'cast02-AOA-tutorial.Rmd' failed with diagnostics:
pandoc document conversion failed with error 5
--- failed re-building 'cast02-AOA-tutorial.Rmd'

--- re-building 'cast03-AOA-parallel.Rmd' using rmarkdown
Loading required package: raster
Loading required package: sp
Loading required package: ggplot2
Loading required package: lattice
Linking to GEOS 3.10.2, GDAL 3.4.1, PROJ 7.2.1; sf_use_s2() is TRUE
Loading required package: viridisLite

Attaching package: 'latticeExtra'

The following object is masked from 'package:ggplot2':

    layer

 - Perfoming the pca

 - Defining the response of the species along PCA axes

    - You have provided standard deviations, so argument niche.breadth will be ignored.

 - Calculating suitability values

   The final environmental suitability was rescaled between 0 and 1.
                  To disable, set argument rescale = FALSE
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in rgeos::gBuffer(cpoints[i, ], width = maxdist) :
  Spatial object is not projected; GEOS expects planar coordinates
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Computing DI of newdata...
Computing AOA...
Computing DI of newdata...
Computing AOA...
Computing DI of newdata...
Computing AOA...
Computing DI of newdata...
Computing AOA...
--- finished re-building 'cast03-AOA-parallel.Rmd'

--- re-building 'cast04-plotgeodist.Rmd' using rmarkdown
Loading required package: ggplot2
Loading required package: lattice
Loading required package: sp
Linking to GEOS 3.10.2, GDAL 3.4.1, PROJ 7.2.1; sf_use_s2() is TRUE
Spherical geometry (s2) switched off
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning in st_buffer.sfc(st_geometry(x), dist, nQuadSegs, endCapStyle = endCapStyle,  :
  st_buffer does not correctly buffer longitude/latitude data
dist is assumed to be in decimal degrees (arc_degrees).
although coordinates are longitude/latitude, st_intersection assumes that they are planar
Warning: attribute variables are assumed to be spatially constant throughout all geometries
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
Spherical geometry (s2) switched off
although coordinates are longitude/latitude, st_intersects assumes that they are planar
although coordinates are longitude/latitude, st_intersects assumes that they are planar
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
2000 prediction points are sampled from the modeldomain
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
2000 prediction points are sampled from the modeldomain
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Spherical geometry (s2) switched on
features are extracted from the modeldomain
Spherical geometry (s2) switched off
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
features are extracted from the modeldomain
Warning in proj4string(obj) :
  CRS object has comment, which is lost in output; in tests, see
https://cran.r-project.org/web/packages/sp/vignettes/CRS_warnings.html
Warning: Transformation introduced infinite values in continuous x-axis
Warning: Removed 72 rows containing non-finite values (stat_density).
Warning: Transformation introduced infinite values in continuous x-axis
Warning: Removed 44 rows containing non-finite values (stat_density).
--- finished re-building 'cast04-plotgeodist.Rmd'

SUMMARY: processing the following file failed:
  'cast02-AOA-tutorial.Rmd'

Error: Vignette re-building failed.
Execution halted