Error(s) in re-building vignettes:
--- re-building 'Basic_analysis_of_DOM_samples.Rmd' using rmarkdown

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

--- finished re-building 'Basic_analysis_of_DOM_samples.Rmd'

--- re-building 'PARAFAC_analysis_of_EEM.Rmd' using rmarkdown

Attaching package: 'kableExtra'

The following object is masked from 'package:dplyr':

    group_rows

Loading required package: ggplot2
Loading required package: eemR
Loading required package: parallel
Warning: Removed 104 rows containing non-finite values (stat_contour).
Warning: Removed 416 rows containing non-finite values (stat_contour).
Warning: Removed 416 rows containing non-finite values (stat_contour).
Warning: Removed 416 rows containing non-finite values (stat_contour).
Warning: Removed 6294 rows containing non-finite values (stat_contour).
Warning: Removed 312 rows containing non-finite values (stat_contour).
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Warning: This metric uses either excitation or emission wavelengths that were not present in the data. Data has been interpolated to fit the requested wavelengths.
Quitting from lines 407-409 (PARAFAC_analysis_of_EEM.Rmd) 
Error: processing vignette 'PARAFAC_analysis_of_EEM.Rmd' failed with diagnostics:
task 1 failed - "number of characters is not computable in "bytes" encoding, element 1"
--- failed re-building 'PARAFAC_analysis_of_EEM.Rmd'

SUMMARY: processing the following file failed:
  'PARAFAC_analysis_of_EEM.Rmd'

Error: Vignette re-building failed.
Execution halted