Error(s) in re-building vignettes:
--- re-building ‘LongDat_cont_tutorial.Rmd’ using rmarkdown
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.7.22
Current TMB version is 1.9.0
Please re-install glmmTMB from source or restore original 'TMB' package (see '?reinstalling' for more information)
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.1 ──
✔ ggplot2 3.3.6     ✔ purrr   0.3.4
✔ tibble  3.1.7     ✔ dplyr   1.0.9
✔ tidyr   1.2.0     ✔ stringr 1.4.0
✔ readr   2.1.2     ✔ forcats 0.5.1
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag()    masks stats::lag()

Attaching package: 'kableExtra'

The following object is masked from 'package:dplyr':

    group_rows

Using p_lm as value column: use value.var to override.
Using p_lm as value column: use value.var to override.
Warning in cor.test.default(subdata[, test_var], subdata$value, method = "spearman") :
  Cannot compute exact p-value with ties
Warning in cor.test.default(subdata[, test_var], subdata$value, method = "spearman") :
  Cannot compute exact p-value with ties
Warning in cor.test.default(subdata[, test_var], subdata$value, method = "spearman") :
  Cannot compute exact p-value with ties
Warning in cor.test.default(subdata_random[, test_var], subdata_random$value,  :
  Cannot compute exact p-value with ties
Warning in cor.test.default(subdata_random[, test_var], subdata_random$value,  :
  Cannot compute exact p-value with ties
Warning in cor.test.default(subdata_random[, test_var], subdata_random$value,  :
  Cannot compute exact p-value with ties
Quitting from lines 109-116 (LongDat_cont_tutorial.Rmd) 
Error: processing vignette 'LongDat_cont_tutorial.Rmd' failed with diagnostics:
object 'NB_theta' not found
--- failed re-building ‘LongDat_cont_tutorial.Rmd’

--- re-building ‘LongDat_disc_tutorial.Rmd’ using rmarkdown
Using p_lm as value column: use value.var to override.
Using p_lm as value column: use value.var to override.
Quitting from lines 109-116 (LongDat_disc_tutorial.Rmd) 
Error: processing vignette 'LongDat_disc_tutorial.Rmd' failed with diagnostics:
object 'NB_theta' not found
--- failed re-building ‘LongDat_disc_tutorial.Rmd’

SUMMARY: processing the following files failed:
  ‘LongDat_cont_tutorial.Rmd’ ‘LongDat_disc_tutorial.Rmd’

Error: Vignette re-building failed.
Execution halted